Query 003127
Match_columns 845
No_of_seqs 351 out of 3112
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 17:32:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003127.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003127hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 9E-156 2E-160 1270.7 56.2 838 2-845 157-1008(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 2E-139 4E-144 1145.0 56.9 823 2-843 61-966 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 9E-130 2E-134 1185.0 93.2 832 2-844 98-940 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-126 6E-131 1151.8 90.2 810 2-843 64-1045(1053)
5 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-125 5E-130 1141.9 93.1 829 2-843 9-916 (917)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 6E-124 1E-128 1136.4 91.9 820 2-843 74-983 (997)
7 COG0474 MgtA Cation transport 100.0 3E-124 6E-129 1124.6 82.7 802 2-841 82-912 (917)
8 TIGR01522 ATPase-IIA2_Ca golgi 100.0 4E-122 1E-126 1111.1 91.5 792 2-843 63-880 (884)
9 PRK15122 magnesium-transportin 100.0 1E-117 3E-122 1065.1 85.9 775 2-842 83-894 (903)
10 PRK10517 magnesium-transportin 100.0 9E-117 2E-121 1055.8 82.6 767 2-843 105-895 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 3E-115 7E-120 1044.5 85.7 766 2-843 71-860 (867)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 5E-116 1E-120 957.7 32.8 818 4-842 98-1004(1019)
13 TIGR01647 ATPase-IIIA_H plasma 100.0 4E-106 9E-111 954.0 79.5 703 2-800 38-748 (755)
14 TIGR01657 P-ATPase-V P-type AT 100.0 8E-106 2E-110 984.3 75.6 740 26-820 192-1046(1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 3E-104 5E-109 974.3 66.3 802 3-842 30-1043(1057)
16 PLN03190 aminophospholipid tra 100.0 2E-100 5E-105 927.2 77.3 799 4-842 117-1138(1178)
17 KOG0206 P-type ATPase [General 100.0 6.9E-92 1.5E-96 821.0 34.8 803 4-843 62-1074(1151)
18 PRK14010 potassium-transportin 100.0 1.4E-86 3.1E-91 759.4 62.8 541 2-660 34-585 (673)
19 PRK01122 potassium-transportin 100.0 5.4E-85 1.2E-89 747.2 63.5 548 2-663 35-595 (679)
20 KOG0208 Cation transport ATPas 100.0 4.4E-85 9.5E-90 725.5 54.1 727 43-819 230-1095(1140)
21 KOG0210 P-type ATPase [Inorgan 100.0 9.9E-86 2.1E-90 701.6 38.5 755 27-842 125-1037(1051)
22 TIGR01497 kdpB K+-transporting 100.0 4.4E-81 9.6E-86 713.0 65.1 539 2-653 34-583 (675)
23 KOG0205 Plasma membrane H+-tra 100.0 3.4E-78 7.3E-83 641.1 34.6 613 3-694 74-698 (942)
24 COG2217 ZntA Cation transport 100.0 2.8E-76 6E-81 674.5 51.6 474 62-661 208-682 (713)
25 PRK11033 zntA zinc/cadmium/mer 100.0 5.4E-73 1.2E-77 669.1 61.4 515 7-660 194-710 (741)
26 TIGR01494 ATPase_P-type ATPase 100.0 4E-73 8.6E-78 650.4 56.0 475 38-660 7-483 (499)
27 KOG0209 P-type ATPase [Inorgan 100.0 1.3E-72 2.8E-77 612.2 46.2 757 26-842 216-1147(1160)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 5E-72 1.1E-76 646.7 54.0 524 5-660 4-529 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.1E-70 2.4E-75 631.2 56.6 505 4-660 3-508 (536)
30 KOG0207 Cation transport ATPas 100.0 1.2E-71 2.6E-76 619.7 39.8 506 47-659 354-866 (951)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 4.8E-69 1E-73 619.3 56.5 460 62-660 88-548 (562)
32 PRK10671 copA copper exporting 100.0 9.7E-68 2.1E-72 637.8 61.6 474 62-659 320-793 (834)
33 COG2216 KdpB High-affinity K+ 100.0 1E-58 2.3E-63 482.6 37.7 525 3-638 35-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.4E-33 2.9E-38 291.5 24.1 223 35-273 4-230 (230)
35 PF00689 Cation_ATPase_C: Cati 99.9 6.3E-22 1.4E-26 196.5 13.2 175 667-842 1-182 (182)
36 KOG4383 Uncharacterized conser 99.9 1E-18 2.3E-23 187.8 35.8 290 409-701 698-1148(1354)
37 PF00702 Hydrolase: haloacid d 99.9 1.8E-21 3.9E-26 199.1 11.2 97 475-597 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.6 9.3E-15 2E-19 126.7 11.2 125 476-629 19-145 (152)
39 PRK10513 sugar phosphate phosp 99.6 1.7E-14 3.7E-19 153.0 14.3 69 563-632 195-266 (270)
40 PRK15126 thiamin pyrimidine py 99.5 3.8E-14 8.2E-19 150.3 12.7 145 486-631 18-259 (272)
41 PRK10976 putative hydrolase; P 99.5 7.7E-14 1.7E-18 147.5 13.5 146 486-632 18-262 (266)
42 PF13246 Hydrolase_like2: Puta 99.5 5E-14 1.1E-18 121.1 8.9 86 334-420 2-90 (91)
43 COG0561 Cof Predicted hydrolas 99.5 8.4E-14 1.8E-18 147.0 12.7 152 480-632 12-259 (264)
44 PLN02887 hydrolase family prot 99.5 2.1E-13 4.5E-18 155.4 14.0 69 563-632 506-577 (580)
45 PRK01158 phosphoglycolate phos 99.5 5.3E-13 1.1E-17 138.0 13.7 145 487-632 20-227 (230)
46 PF08282 Hydrolase_3: haloacid 99.4 5.9E-13 1.3E-17 139.6 12.8 145 485-630 13-254 (254)
47 TIGR01487 SPP-like sucrose-pho 99.4 8.3E-13 1.8E-17 134.8 11.7 144 486-630 17-215 (215)
48 TIGR01482 SPP-subfamily Sucros 99.4 1.8E-12 3.9E-17 133.5 12.9 144 487-631 15-222 (225)
49 PRK10530 pyridoxal phosphate ( 99.4 2.1E-12 4.6E-17 137.1 13.3 69 563-632 198-269 (272)
50 TIGR00099 Cof-subfamily Cof su 99.3 2.1E-11 4.5E-16 128.1 11.9 144 486-630 15-256 (256)
51 PRK03669 mannosyl-3-phosphogly 99.3 5.3E-11 1.1E-15 125.9 14.3 146 487-632 24-266 (271)
52 PRK11133 serB phosphoserine ph 99.2 8.1E-11 1.8E-15 125.8 13.1 128 487-631 181-316 (322)
53 TIGR01486 HAD-SF-IIB-MPGP mann 99.2 1.3E-10 2.9E-15 121.9 14.2 144 488-632 17-254 (256)
54 TIGR02726 phenyl_P_delta pheny 99.1 2.4E-10 5.1E-15 110.2 9.4 104 494-627 41-147 (169)
55 TIGR01670 YrbI-phosphatas 3-de 99.1 6.9E-10 1.5E-14 106.3 11.4 107 495-631 36-146 (154)
56 TIGR02137 HSK-PSP phosphoserin 99.1 8.8E-10 1.9E-14 110.3 11.5 128 487-633 68-198 (203)
57 PRK00192 mannosyl-3-phosphogly 99.1 1.1E-09 2.4E-14 116.0 12.9 147 485-632 19-268 (273)
58 COG1778 Low specificity phosph 99.0 1.3E-09 2.8E-14 98.8 8.4 102 494-625 42-146 (170)
59 COG0560 SerB Phosphoserine pho 99.0 1.6E-09 3.6E-14 108.9 10.2 123 486-620 76-201 (212)
60 TIGR02471 sucr_syn_bact_C sucr 99.0 4.1E-09 8.8E-14 109.2 12.2 69 563-632 158-233 (236)
61 TIGR01485 SPP_plant-cyano sucr 99.0 6.2E-09 1.3E-13 108.7 13.2 147 485-632 19-245 (249)
62 PRK09484 3-deoxy-D-manno-octul 98.9 6.3E-09 1.4E-13 102.8 10.8 103 494-626 55-160 (183)
63 TIGR00338 serB phosphoserine p 98.9 7.1E-09 1.5E-13 106.2 11.1 128 487-629 85-218 (219)
64 PLN02382 probable sucrose-phos 98.8 2.2E-08 4.7E-13 111.3 13.0 145 487-632 28-258 (413)
65 KOG1615 Phosphoserine phosphat 98.6 5.4E-08 1.2E-12 91.4 6.3 105 487-603 88-199 (227)
66 PRK08238 hypothetical protein; 98.6 1.2E-05 2.7E-10 90.7 25.3 97 487-608 72-169 (479)
67 PRK13582 thrH phosphoserine ph 98.6 4E-07 8.6E-12 92.2 11.5 123 487-630 68-195 (205)
68 TIGR02461 osmo_MPG_phos mannos 98.6 2.8E-07 6.1E-12 94.2 10.2 44 485-528 13-56 (225)
69 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.6 3.7E-07 8.1E-12 92.0 10.9 118 487-615 80-200 (201)
70 TIGR02463 MPGP_rel mannosyl-3- 98.6 5.8E-07 1.3E-11 92.1 12.4 40 488-527 17-56 (221)
71 PRK10187 trehalose-6-phosphate 98.5 9.5E-07 2.1E-11 92.7 13.6 138 487-631 36-241 (266)
72 PRK12702 mannosyl-3-phosphogly 98.4 2.8E-06 6E-11 87.5 11.2 44 485-528 16-59 (302)
73 PLN02954 phosphoserine phospha 98.4 4.8E-06 1E-10 85.5 13.1 128 487-628 84-221 (224)
74 PTZ00174 phosphomannomutase; P 98.3 2.1E-06 4.6E-11 89.4 9.8 53 563-617 187-244 (247)
75 COG0546 Gph Predicted phosphat 98.3 3.8E-06 8.2E-11 85.9 10.9 127 485-630 87-217 (220)
76 PRK14502 bifunctional mannosyl 98.3 3E-06 6.5E-11 96.9 11.0 48 480-527 425-473 (694)
77 TIGR03333 salvage_mtnX 2-hydro 98.3 6.9E-06 1.5E-10 83.6 12.4 133 486-631 69-209 (214)
78 PF05116 S6PP: Sucrose-6F-phos 98.2 4.5E-06 9.8E-11 86.6 9.9 69 563-632 164-244 (247)
79 PRK13222 phosphoglycolate phos 98.2 8.7E-06 1.9E-10 83.7 11.2 128 486-632 92-223 (226)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.2 5.8E-06 1.2E-10 83.4 9.4 109 485-603 85-197 (202)
81 cd01427 HAD_like Haloacid deha 98.1 5.9E-06 1.3E-10 77.1 7.5 113 484-597 21-133 (139)
82 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.4E-05 3E-10 81.7 10.5 105 487-601 74-184 (219)
83 TIGR01484 HAD-SF-IIB HAD-super 98.1 1.1E-05 2.5E-10 81.4 9.8 116 487-602 17-204 (204)
84 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.3E-05 2.8E-10 81.1 10.0 125 487-630 75-203 (205)
85 PF12710 HAD: haloacid dehalog 98.1 8.2E-06 1.8E-10 81.5 8.3 92 490-594 92-192 (192)
86 TIGR01488 HAD-SF-IB Haloacid D 98.1 8.7E-06 1.9E-10 80.2 8.0 102 487-596 73-177 (177)
87 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.3E-05 2.7E-10 79.9 8.2 115 486-601 71-186 (188)
88 PRK13288 pyrophosphatase PpaX; 97.9 6E-05 1.3E-09 76.8 10.2 125 487-630 82-210 (214)
89 PRK13223 phosphoglycolate phos 97.9 8E-05 1.7E-09 78.7 10.9 126 486-630 100-229 (272)
90 TIGR01449 PGP_bact 2-phosphogl 97.9 5.4E-05 1.2E-09 77.0 9.2 122 487-627 85-210 (213)
91 PRK14501 putative bifunctional 97.9 0.0001 2.2E-09 89.0 12.9 138 487-631 514-721 (726)
92 PRK10826 2-deoxyglucose-6-phos 97.7 0.00012 2.5E-09 75.1 9.0 120 486-627 91-216 (222)
93 PRK13226 phosphoglycolate phos 97.7 0.00024 5.1E-09 73.2 10.4 124 487-629 95-223 (229)
94 PRK13225 phosphoglycolate phos 97.6 0.00046 9.9E-09 72.7 11.7 119 487-630 142-267 (273)
95 PLN02770 haloacid dehalogenase 97.6 0.00041 8.9E-09 72.3 10.6 117 487-620 108-227 (248)
96 PLN03243 haloacid dehalogenase 97.6 0.00041 8.9E-09 72.6 10.5 122 487-627 109-231 (260)
97 TIGR01545 YfhB_g-proteo haloac 97.6 0.00039 8.5E-09 70.2 10.0 107 487-603 94-201 (210)
98 TIGR03351 PhnX-like phosphonat 97.6 0.00036 7.8E-09 71.3 9.7 124 486-628 86-217 (220)
99 PRK11590 hypothetical protein; 97.5 0.0007 1.5E-08 68.7 11.6 107 487-603 95-202 (211)
100 TIGR01544 HAD-SF-IE haloacid d 97.5 0.0015 3.3E-08 67.8 14.0 139 486-630 120-273 (277)
101 TIGR00685 T6PP trehalose-phosp 97.5 0.0004 8.7E-09 72.2 9.9 67 559-630 162-239 (244)
102 smart00775 LNS2 LNS2 domain. T 97.5 0.0005 1.1E-08 65.8 9.5 105 485-599 25-141 (157)
103 TIGR01422 phosphonatase phosph 97.5 0.00058 1.3E-08 71.5 10.4 98 487-600 99-197 (253)
104 PRK13478 phosphonoacetaldehyde 97.5 0.00067 1.5E-08 71.6 10.9 96 487-598 101-197 (267)
105 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.00054 1.2E-08 68.7 7.6 94 485-596 104-197 (197)
106 PRK11587 putative phosphatase; 97.3 0.0011 2.5E-08 67.6 9.9 115 487-620 83-199 (218)
107 PLN02580 trehalose-phosphatase 97.3 0.0022 4.8E-08 69.7 11.8 64 563-631 300-374 (384)
108 COG4030 Uncharacterized protei 97.2 0.0016 3.4E-08 63.2 9.2 142 487-631 83-262 (315)
109 PRK14988 GMP/IMP nucleotidase; 97.2 0.001 2.2E-08 68.1 7.9 100 487-603 93-194 (224)
110 PLN02423 phosphomannomutase 97.2 0.0022 4.8E-08 66.5 10.2 39 563-603 188-231 (245)
111 TIGR01672 AphA HAD superfamily 97.2 0.0012 2.7E-08 67.4 8.1 88 488-599 115-206 (237)
112 TIGR01662 HAD-SF-IIIA HAD-supe 97.1 0.0025 5.4E-08 59.2 9.4 91 486-600 24-127 (132)
113 TIGR02253 CTE7 HAD superfamily 97.1 0.0016 3.6E-08 66.5 8.9 97 487-600 94-191 (221)
114 PLN02575 haloacid dehalogenase 97.1 0.0031 6.7E-08 68.7 11.1 121 487-626 216-337 (381)
115 PRK06698 bifunctional 5'-methy 97.1 0.0024 5.2E-08 73.0 10.7 124 487-632 330-455 (459)
116 TIGR01428 HAD_type_II 2-haloal 97.1 0.0016 3.5E-08 65.3 7.9 98 487-601 92-189 (198)
117 PRK11009 aphA acid phosphatase 97.1 0.0018 4E-08 66.1 8.1 88 487-600 114-207 (237)
118 PLN02205 alpha,alpha-trehalose 97.0 0.0047 1E-07 74.9 12.8 139 486-631 615-842 (854)
119 PRK08942 D,D-heptose 1,7-bisph 97.0 0.0056 1.2E-07 60.4 10.6 127 487-630 29-176 (181)
120 TIGR01990 bPGM beta-phosphoglu 96.9 0.0015 3.3E-08 64.6 5.8 95 487-600 87-181 (185)
121 PRK09449 dUMP phosphatase; Pro 96.9 0.0047 1E-07 63.3 9.5 125 487-630 95-222 (224)
122 PHA02530 pseT polynucleotide k 96.9 0.0025 5.3E-08 68.6 7.5 109 484-601 184-293 (300)
123 TIGR01509 HAD-SF-IA-v3 haloaci 96.8 0.0036 7.8E-08 61.7 7.8 95 487-599 85-179 (183)
124 TIGR02254 YjjG/YfnB HAD superf 96.8 0.0042 9.1E-08 63.6 8.2 122 487-628 97-222 (224)
125 COG3769 Predicted hydrolase (H 96.8 0.0081 1.8E-07 58.3 9.2 37 491-527 27-63 (274)
126 PF13419 HAD_2: Haloacid dehal 96.8 0.0028 6.2E-08 61.7 6.5 98 486-600 76-173 (176)
127 COG4359 Uncharacterized conser 96.7 0.0033 7.1E-08 59.2 6.2 105 487-601 73-183 (220)
128 PLN02779 haloacid dehalogenase 96.7 0.0052 1.1E-07 65.4 8.8 117 487-620 144-264 (286)
129 TIGR02009 PGMB-YQAB-SF beta-ph 96.7 0.0028 6.2E-08 62.7 6.4 94 486-600 87-182 (185)
130 TIGR01685 MDP-1 magnesium-depe 96.7 0.0076 1.6E-07 58.5 8.8 113 478-603 36-156 (174)
131 PLN02940 riboflavin kinase 96.7 0.0048 1E-07 68.4 8.5 116 487-620 93-212 (382)
132 PRK06769 hypothetical protein; 96.7 0.0053 1.1E-07 60.0 7.6 99 488-602 29-135 (173)
133 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.012 2.5E-07 57.8 8.6 124 488-620 27-170 (176)
134 TIGR01549 HAD-SF-IA-v1 haloaci 96.4 0.0081 1.7E-07 57.4 6.8 90 488-597 65-154 (154)
135 TIGR01656 Histidinol-ppas hist 96.3 0.014 3E-07 55.4 7.6 98 487-601 27-142 (147)
136 TIGR01675 plant-AP plant acid 96.2 0.019 4.2E-07 57.9 8.7 88 485-590 118-209 (229)
137 TIGR02252 DREG-2 REG-2-like, H 96.2 0.01 2.2E-07 59.8 6.8 95 487-599 105-200 (203)
138 TIGR01668 YqeG_hyp_ppase HAD s 96.0 0.014 3E-07 56.9 6.3 87 487-601 43-133 (170)
139 PLN03017 trehalose-phosphatase 95.9 0.092 2E-06 56.8 12.6 64 563-631 282-356 (366)
140 TIGR01261 hisB_Nterm histidino 95.9 0.016 3.6E-07 55.7 6.2 99 487-602 29-145 (161)
141 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.9 0.085 1.9E-06 55.2 11.9 49 480-528 10-65 (257)
142 TIGR01681 HAD-SF-IIIC HAD-supe 95.7 0.025 5.5E-07 52.1 6.5 39 487-525 29-68 (128)
143 TIGR01533 lipo_e_P4 5'-nucleot 95.7 0.057 1.2E-06 56.2 9.8 87 485-594 116-205 (266)
144 PLN02811 hydrolase 95.7 0.029 6.3E-07 57.3 7.6 98 487-601 78-181 (220)
145 smart00577 CPDc catalytic doma 95.7 0.015 3.2E-07 55.2 4.9 96 485-601 43-139 (148)
146 PLN02919 haloacid dehalogenase 95.6 0.046 1E-06 68.6 9.9 129 487-633 161-294 (1057)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 95.5 0.036 7.8E-07 53.7 7.0 94 488-600 43-158 (166)
148 TIGR01691 enolase-ppase 2,3-di 95.5 0.052 1.1E-06 55.1 8.4 99 485-602 93-194 (220)
149 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.5 0.11 2.5E-06 53.8 11.2 95 480-598 17-116 (242)
150 PF06888 Put_Phosphatase: Puta 95.4 0.04 8.7E-07 56.0 7.3 106 487-593 71-185 (234)
151 PRK05446 imidazole glycerol-ph 95.2 0.064 1.4E-06 58.3 8.1 99 486-601 29-145 (354)
152 PF08235 LNS2: LNS2 (Lipin/Ned 95.2 0.11 2.4E-06 49.0 8.7 103 485-599 25-141 (157)
153 COG2179 Predicted hydrolase of 95.1 0.1 2.2E-06 49.0 8.1 86 486-599 45-133 (175)
154 KOG3120 Predicted haloacid deh 95.1 0.029 6.2E-07 54.8 4.6 121 487-608 84-214 (256)
155 TIGR01686 FkbH FkbH-like domai 95.0 0.069 1.5E-06 57.9 8.1 92 487-603 31-129 (320)
156 TIGR02247 HAD-1A3-hyp Epoxide 95.0 0.028 6.1E-07 56.9 4.7 99 486-601 93-193 (211)
157 PRK10563 6-phosphogluconate ph 94.9 0.025 5.5E-07 57.7 4.0 96 487-602 88-184 (221)
158 PF13344 Hydrolase_6: Haloacid 94.6 0.055 1.2E-06 47.5 4.9 90 480-598 7-100 (101)
159 PRK10444 UMP phosphatase; Prov 94.6 0.13 2.8E-06 53.4 8.3 48 480-527 10-60 (248)
160 PRK09456 ?-D-glucose-1-phospha 94.6 0.082 1.8E-06 53.0 6.7 98 487-601 84-182 (199)
161 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.2 0.21 4.5E-06 52.0 9.1 50 480-529 10-62 (249)
162 PLN02645 phosphoglycolate phos 94.1 0.12 2.7E-06 55.7 7.3 97 480-602 37-136 (311)
163 TIGR01993 Pyr-5-nucltdase pyri 94.0 0.14 3E-06 50.6 6.9 98 487-600 84-181 (184)
164 PRK10725 fructose-1-P/6-phosph 94.0 0.1 2.2E-06 51.6 5.9 91 492-600 92-182 (188)
165 PHA02597 30.2 hypothetical pro 93.7 0.19 4E-06 50.2 7.2 101 487-607 74-177 (197)
166 PLN02151 trehalose-phosphatase 93.4 0.76 1.6E-05 49.7 11.6 64 563-631 268-342 (354)
167 KOG3040 Predicted sugar phosph 93.4 0.37 8E-06 46.8 8.0 52 476-527 12-66 (262)
168 PF02358 Trehalose_PPase: Treh 93.3 0.31 6.6E-06 50.3 8.4 64 556-620 157-233 (235)
169 COG0637 Predicted phosphatase/ 93.2 0.17 3.7E-06 51.6 6.0 101 486-603 85-185 (221)
170 PF03767 Acid_phosphat_B: HAD 93.0 0.17 3.7E-06 51.7 5.8 90 486-592 114-207 (229)
171 PF09419 PGP_phosphatase: Mito 92.1 0.54 1.2E-05 45.1 7.5 90 485-600 57-161 (168)
172 TIGR01680 Veg_Stor_Prot vegeta 92.1 0.84 1.8E-05 47.2 9.3 88 485-590 143-235 (275)
173 COG3700 AphA Acid phosphatase 91.9 0.42 9.2E-06 45.0 6.2 87 488-598 115-205 (237)
174 COG1877 OtsB Trehalose-6-phosp 91.2 2.8 6.1E-05 43.6 12.1 119 485-603 38-228 (266)
175 TIGR01684 viral_ppase viral ph 90.9 0.61 1.3E-05 48.7 6.9 53 488-540 146-199 (301)
176 PRK10748 flavin mononucleotide 90.3 0.74 1.6E-05 47.5 7.0 92 487-603 113-207 (238)
177 TIGR01452 PGP_euk phosphoglyco 89.8 3.5 7.6E-05 43.7 11.9 93 480-601 11-108 (279)
178 PLN02177 glycerol-3-phosphate 88.3 2.3 4.9E-05 48.7 9.6 98 488-604 111-215 (497)
179 PHA03398 viral phosphatase sup 87.4 1.5 3.3E-05 45.9 6.8 51 489-539 150-200 (303)
180 COG1011 Predicted hydrolase (H 87.1 1.9 4.1E-05 44.0 7.5 122 487-630 99-226 (229)
181 TIGR01689 EcbF-BcbF capsule bi 86.6 0.86 1.9E-05 41.6 4.0 32 486-517 23-54 (126)
182 TIGR01663 PNK-3'Pase polynucle 85.7 2.6 5.6E-05 48.5 8.2 40 488-527 198-249 (526)
183 PF12689 Acid_PPase: Acid Phos 84.4 3.7 8.1E-05 39.6 7.4 98 487-601 45-146 (169)
184 COG0241 HisB Histidinol phosph 82.8 7.4 0.00016 37.9 8.8 87 488-599 32-144 (181)
185 TIGR01493 HAD-SF-IA-v2 Haloaci 81.5 1 2.2E-05 43.9 2.4 86 487-596 90-175 (175)
186 PTZ00445 p36-lilke protein; Pr 81.3 8.7 0.00019 38.2 8.7 152 436-600 28-201 (219)
187 TIGR02251 HIF-SF_euk Dullard-l 80.1 1.4 3E-05 42.4 2.8 94 484-601 39-136 (162)
188 TIGR02244 HAD-IG-Ncltidse HAD 78.0 12 0.00026 40.6 9.3 108 488-599 185-318 (343)
189 PLN03063 alpha,alpha-trehalose 77.0 33 0.00072 42.1 13.9 38 488-525 533-571 (797)
190 PF05822 UMPH-1: Pyrimidine 5' 70.6 11 0.00023 38.7 6.3 132 487-630 90-241 (246)
191 COG0647 NagD Predicted sugar p 66.1 7.4 0.00016 40.6 4.3 107 480-620 17-128 (269)
192 TIGR01460 HAD-SF-IIA Haloacid 63.3 14 0.0003 38.1 5.6 49 480-528 7-59 (236)
193 TIGR01459 HAD-SF-IIA-hyp4 HAD- 59.6 8.2 0.00018 39.8 3.2 97 489-600 140-237 (242)
194 TIGR01452 PGP_euk phosphoglyco 59.5 45 0.00097 35.2 8.9 98 489-601 145-244 (279)
195 PF11019 DUF2608: Protein of u 58.9 47 0.001 34.5 8.7 106 487-595 81-196 (252)
196 PLN03064 alpha,alpha-trehalose 58.1 69 0.0015 39.8 11.1 38 488-525 623-661 (934)
197 TIGR01456 CECR5 HAD-superfamil 57.8 45 0.00097 36.1 8.7 49 480-528 9-65 (321)
198 PF13242 Hydrolase_like: HAD-h 57.7 19 0.00041 29.3 4.5 54 566-620 11-71 (75)
199 COG2503 Predicted secreted aci 55.7 66 0.0014 32.7 8.5 87 487-596 122-212 (274)
200 TIGR00216 ispH_lytB (E)-4-hydr 54.0 81 0.0018 33.2 9.4 172 405-609 71-267 (280)
201 TIGR02468 sucrsPsyn_pln sucros 52.4 85 0.0018 39.4 10.5 41 563-603 955-1001(1050)
202 PF00122 E1-E2_ATPase: E1-E2 A 52.4 76 0.0016 32.2 9.0 63 37-108 2-64 (230)
203 PF06570 DUF1129: Protein of u 50.1 2.4E+02 0.0051 28.2 11.9 20 821-840 180-199 (206)
204 PRK11507 ribosome-associated p 47.8 23 0.00049 28.5 3.2 26 68-93 38-63 (70)
205 TIGR01647 ATPase-IIIA_H plasma 47.2 2.9E+02 0.0062 34.0 14.1 193 35-258 59-263 (755)
206 PRK01045 ispH 4-hydroxy-3-meth 46.9 1E+02 0.0022 32.9 8.8 174 404-609 70-269 (298)
207 KOG3085 Predicted hydrolase (H 46.0 38 0.00082 34.6 5.3 94 487-600 113-209 (237)
208 PRK14194 bifunctional 5,10-met 45.9 3.1E+02 0.0067 29.3 12.2 167 431-621 12-210 (301)
209 PF06506 PrpR_N: Propionate ca 44.9 52 0.0011 32.0 6.1 135 485-642 15-172 (176)
210 TIGR00739 yajC preprotein tran 43.0 46 0.001 28.0 4.5 13 82-94 37-49 (84)
211 TIGR01106 ATPase-IIC_X-K sodiu 42.9 4.5E+02 0.0097 33.5 15.3 79 31-119 104-183 (997)
212 CHL00200 trpA tryptophan synth 42.9 2E+02 0.0043 30.1 10.3 40 563-603 188-231 (263)
213 PF13275 S4_2: S4 domain; PDB: 42.8 15 0.00032 29.1 1.5 27 68-95 34-60 (65)
214 KOG3109 Haloacid dehalogenase- 40.7 90 0.002 31.3 6.7 108 480-600 92-201 (244)
215 PRK14189 bifunctional 5,10-met 40.1 3.5E+02 0.0076 28.6 11.5 166 431-620 11-208 (285)
216 PF13380 CoA_binding_2: CoA bi 39.6 36 0.00078 30.5 3.7 40 488-527 64-104 (116)
217 PRK14179 bifunctional 5,10-met 39.3 4.4E+02 0.0096 27.9 12.1 166 431-620 10-208 (284)
218 PF01455 HupF_HypC: HupF/HypC 39.2 79 0.0017 25.4 5.1 33 64-96 16-51 (68)
219 cd05017 SIS_PGI_PMI_1 The memb 38.8 60 0.0013 29.1 5.1 39 486-526 53-91 (119)
220 KOG2914 Predicted haloacid-hal 37.7 74 0.0016 32.3 5.9 100 487-603 92-195 (222)
221 PRK12360 4-hydroxy-3-methylbut 37.5 1.9E+02 0.0042 30.4 9.1 172 405-609 74-268 (281)
222 TIGR02250 FCP1_euk FCP1-like p 36.0 55 0.0012 31.2 4.5 43 485-528 56-98 (156)
223 PRK05585 yajC preprotein trans 35.7 79 0.0017 27.9 5.1 13 82-94 52-64 (106)
224 PRK05886 yajC preprotein trans 35.6 91 0.002 27.6 5.3 6 87-92 61-66 (109)
225 PF15584 Imm44: Immunity prote 35.5 17 0.00036 30.6 0.7 19 85-103 13-31 (94)
226 COG0078 ArgF Ornithine carbamo 35.0 3.8E+02 0.0082 28.5 10.6 85 488-600 88-178 (310)
227 PRK14174 bifunctional 5,10-met 34.1 5.2E+02 0.011 27.5 11.7 165 431-620 9-213 (295)
228 cd05013 SIS_RpiR RpiR-like pro 33.8 1.5E+02 0.0033 26.7 7.2 107 491-603 2-112 (139)
229 PF02699 YajC: Preprotein tran 33.2 73 0.0016 26.6 4.3 14 81-94 35-48 (82)
230 TIGR01652 ATPase-Plipid phosph 32.8 1.1E+03 0.023 30.4 16.6 75 33-107 57-144 (1057)
231 PF06941 NT5C: 5' nucleotidase 32.6 34 0.00075 33.7 2.7 28 487-514 73-100 (191)
232 PF00389 2-Hacid_dh: D-isomer 32.4 3.8E+02 0.0083 24.3 12.5 84 484-603 3-89 (133)
233 COG1862 YajC Preprotein transl 32.2 98 0.0021 26.8 4.9 13 82-94 43-55 (97)
234 PF03120 DNA_ligase_OB: NAD-de 31.7 25 0.00055 29.3 1.2 26 78-103 45-71 (82)
235 PF02254 TrkA_N: TrkA-N domain 30.4 3.7E+02 0.008 23.5 9.4 105 490-601 8-113 (116)
236 COG0279 GmhA Phosphoheptose is 30.3 58 0.0013 31.0 3.5 43 477-521 112-154 (176)
237 PF12710 HAD: haloacid dehalog 30.2 26 0.00056 34.3 1.3 14 280-293 1-14 (192)
238 PF03808 Glyco_tran_WecB: Glyc 30.0 4.8E+02 0.01 25.1 10.1 121 492-638 37-171 (172)
239 PRK14188 bifunctional 5,10-met 29.9 7E+02 0.015 26.5 15.0 166 431-620 10-208 (296)
240 PRK03692 putative UDP-N-acetyl 29.5 2.9E+02 0.0062 28.5 8.8 122 492-636 94-225 (243)
241 TIGR01517 ATPase-IIB_Ca plasma 29.2 1.3E+03 0.027 29.3 20.5 37 71-108 185-221 (941)
242 cd00860 ThrRS_anticodon ThrRS 29.2 1.5E+02 0.0032 24.7 5.7 46 482-527 7-53 (91)
243 COG1188 Ribosome-associated he 29.1 65 0.0014 27.9 3.3 29 68-97 35-63 (100)
244 PRK13125 trpA tryptophan synth 28.8 4E+02 0.0087 27.4 9.9 36 490-525 116-153 (244)
245 KOG2882 p-Nitrophenyl phosphat 28.7 90 0.0019 32.9 4.8 48 480-527 31-81 (306)
246 PLN02645 phosphoglycolate phos 28.4 1E+02 0.0022 33.1 5.6 51 577-629 247-306 (311)
247 PF12017 Tnp_P_element: Transp 28.2 1.3E+02 0.0027 30.9 5.8 44 485-528 190-234 (236)
248 TIGR00696 wecB_tagA_cpsF bacte 28.2 3.6E+02 0.0077 26.3 8.8 125 492-639 37-171 (177)
249 PRK14166 bifunctional 5,10-met 28.0 7.3E+02 0.016 26.2 11.5 166 431-620 9-207 (282)
250 TIGR02988 YaaA_near_RecF S4 do 27.5 89 0.0019 24.0 3.6 28 62-91 31-58 (59)
251 PF02401 LYTB: LytB protein; 27.5 29 0.00063 36.5 1.1 169 408-609 72-268 (281)
252 TIGR01657 P-ATPase-V P-type AT 27.4 1.4E+03 0.03 29.3 16.2 36 84-119 235-273 (1054)
253 cd05008 SIS_GlmS_GlmD_1 SIS (S 27.3 65 0.0014 29.0 3.4 31 487-517 57-87 (126)
254 PRK13670 hypothetical protein; 27.3 4E+02 0.0086 29.7 10.0 98 477-596 2-113 (388)
255 cd05014 SIS_Kpsf KpsF-like pro 27.2 47 0.001 30.0 2.4 33 487-519 58-90 (128)
256 TIGR02230 ATPase_gene1 F0F1-AT 26.9 2.4E+02 0.0051 24.6 6.3 28 786-813 40-67 (100)
257 TIGR03127 RuMP_HxlB 6-phospho 26.7 3.8E+02 0.0081 25.8 8.9 105 490-603 18-124 (179)
258 PRK04980 hypothetical protein; 26.6 1.5E+02 0.0033 25.9 5.1 56 63-123 17-79 (102)
259 PF08645 PNK3P: Polynucleotide 26.2 60 0.0013 31.0 3.0 25 488-512 30-54 (159)
260 PLN02591 tryptophan synthase 25.7 4.6E+02 0.0099 27.2 9.5 96 486-603 114-218 (250)
261 cd05710 SIS_1 A subgroup of th 24.9 64 0.0014 29.0 2.8 31 487-517 58-88 (120)
262 KOG3128 Uncharacterized conser 24.7 2.2E+02 0.0047 29.3 6.5 135 488-629 139-289 (298)
263 PF03129 HGTP_anticodon: Antic 24.6 1.6E+02 0.0035 24.8 5.1 49 480-528 3-55 (94)
264 TIGR01116 ATPase-IIA1_Ca sarco 24.0 1.5E+03 0.033 28.5 17.2 68 31-108 36-103 (917)
265 PF09926 DUF2158: Uncharacteri 23.9 51 0.0011 25.0 1.6 12 84-95 2-13 (53)
266 PRK14172 bifunctional 5,10-met 23.4 7.3E+02 0.016 26.2 10.5 168 431-621 10-209 (278)
267 PF05240 APOBEC_C: APOBEC-like 23.0 1E+02 0.0023 23.5 3.0 25 490-514 2-26 (55)
268 smart00306 HintN Hint (Hedgeho 22.9 87 0.0019 26.6 3.2 26 67-92 74-99 (100)
269 PRK14170 bifunctional 5,10-met 22.9 9.2E+02 0.02 25.5 11.4 166 431-621 10-208 (284)
270 cd04823 ALAD_PBGS_aspartate_ri 22.4 1.9E+02 0.0042 30.7 5.9 119 490-632 54-174 (320)
271 COG4996 Predicted phosphatase 22.2 1.4E+02 0.003 27.3 4.2 44 485-528 39-82 (164)
272 cd02071 MM_CoA_mut_B12_BD meth 22.2 1.6E+02 0.0035 26.5 4.9 55 474-528 49-105 (122)
273 COG0761 lytB 4-Hydroxy-3-methy 22.0 4.7E+02 0.01 27.5 8.5 135 437-603 101-266 (294)
274 TIGR00612 ispG_gcpE 1-hydroxy- 21.9 2.5E+02 0.0054 30.2 6.7 92 493-603 213-315 (346)
275 COG4229 Predicted enolase-phos 21.6 2.7E+02 0.0057 27.2 6.1 98 485-603 101-201 (229)
276 COG2501 S4-like RNA binding pr 21.2 1.1E+02 0.0024 24.9 3.0 26 68-93 38-63 (73)
277 COG1832 Predicted CoA-binding 21.1 1.7E+02 0.0037 27.1 4.5 37 475-511 15-51 (140)
278 PRK11840 bifunctional sulfur c 21.0 3.7E+02 0.0081 28.9 7.8 50 474-523 165-217 (326)
279 PF01479 S4: S4 domain; Inter 21.0 81 0.0018 22.9 2.2 21 69-89 28-48 (48)
280 PRK14167 bifunctional 5,10-met 20.8 1E+03 0.022 25.3 11.7 165 431-620 10-211 (297)
281 PRK14175 bifunctional 5,10-met 20.7 9.4E+02 0.02 25.5 10.8 165 431-620 11-208 (286)
282 PRK14190 bifunctional 5,10-met 20.1 1E+03 0.023 25.1 11.2 165 431-620 11-208 (284)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-156 Score=1270.71 Aligned_cols=838 Identities=62% Similarity=0.960 Sum_probs=790.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
.++||.+||++|+.+|+++++...+|+|+..|++++++++++++..||++++++++|++...+.++.|+|||+.++|+.-
T Consensus 157 TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~ 236 (1034)
T KOG0204|consen 157 TLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIY 236 (1034)
T ss_pred hHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEe
Confidence 57899999999999999999888899999999999999999999999999999999999888999999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC-CCCeEEeccEEEeceEEEEEEEEeecchhhHHH
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLM 160 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~-~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 160 (845)
||+||||+.++.||.+||||++++|+++.+|||++||||++++|.. .++++++||++.+|+++++|+++|.+|++|+++
T Consensus 237 diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m 316 (1034)
T KOG0204|consen 237 DLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIM 316 (1034)
T ss_pred eeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHH
Confidence 9999999999999999999999999999999999999999999986 789999999999999999999999999999999
Q ss_pred HhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc--cccCCCChHHHHHHHHHHHHHHHhh
Q 003127 161 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEFFAIAVTIVVVA 238 (845)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~~ 238 (845)
..+.+...++||+|-++++++..+..+++.++.+++++++.+++......+.. +.|.......+.++|..++.+++++
T Consensus 317 ~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 317 TLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred HhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEE
Confidence 99999988889999999999999999999999999999999988766544433 3454445678899999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCC
Q 003127 239 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 318 (845)
Q Consensus 239 ~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~ 318 (845)
+|+|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||+|+|+|++.|++++.++.+... ..
T Consensus 397 VPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-----~~ 471 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-----SS 471 (1034)
T ss_pred CCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-----cc
Confidence 9999999999999999999999999999999999999999999999999999999999999998877644322 15
Q ss_pred CCChhHHHHHHHHHHhcCCceEEecCCC--ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEE
Q 003127 319 SIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVI 396 (845)
Q Consensus 319 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv 396 (845)
.+++...+++.+++..|++..+..++.+ ..++.|+|+|+||+.+..++|.+++..+.+.++++.+||+|.||+|++++
T Consensus 472 ~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi 551 (1034)
T KOG0204|consen 472 NLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVI 551 (1034)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEE
Confidence 6788899999999999988888776555 67789999999999999999999999999999999999999999999999
Q ss_pred EcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCC----CCCC-CCC
Q 003127 397 ELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE----FSAD-API 471 (845)
Q Consensus 397 ~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~----~~~~-~~~ 471 (845)
+.++++.++|+|||+|.|+.+|+++++.+|+..+++++.++.+++.++.|+.+|+|++|+|||++... ++.+ ...
T Consensus 552 ~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~ 631 (1034)
T KOG0204|consen 552 KLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEEL 631 (1034)
T ss_pred EcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCcccccc
Confidence 98877734999999999999999999999999999999999999999999999999999999996544 2222 246
Q ss_pred CCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhh
Q 003127 472 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSK 549 (845)
Q Consensus 472 ~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g~~~~~~~~~~~~~ 549 (845)
.+.+++++|+++++||.||+++++|+.|+++||.|.|+||||..||+++|.+|||..+++ .+++|+++.++++++..+
T Consensus 632 ~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~ 711 (1034)
T KOG0204|consen 632 PEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDK 711 (1034)
T ss_pred CCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHh
Confidence 788999999999999999999999999999999999999999999999999999999887 899999999999999999
Q ss_pred hcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 550 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 550 ~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
..++.+|.+|.+|.+|..+|+.|++. |++|+++|||.||.|+|++||||.|||+.|+|+||++||++++||||.+++++
T Consensus 712 i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 712 IWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred hhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 99999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCC
Q 003127 630 AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKG 709 (845)
Q Consensus 630 i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~ 709 (845)
+++||+.|.||+|+++|+++-|++++++.|..++..+.+|+++.|+||.|+++|.+.+++||+|||.+++|+|+|..|++
T Consensus 791 v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~ 870 (1034)
T KOG0204|consen 791 VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTK 870 (1034)
T ss_pred HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC--ccchhhhHHHHHHHHHHHhcccccccccccccccCCchh
Q 003127 710 NFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKN 787 (845)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n 787 (845)
+++++.||+++++|++||..+++.+.|.+...|+.+++. +.....|++|++||++|+||.++.|+.++.|+|+++++|
T Consensus 871 ~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N 950 (1034)
T KOG0204|consen 871 PLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRN 950 (1034)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcC
Confidence 999999999999999999999999999999888766653 355778999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhccCC
Q 003127 788 YVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQVG 845 (845)
Q Consensus 788 ~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~~~ 845 (845)
++|+..+..++++|++++.|.+.+|.++|++|.+|++|+.++++.|++..+.|.+|++
T Consensus 951 ~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 951 RLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVS 1008 (1034)
T ss_pred ceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheecccc
Confidence 9999999999999999999999999999999999999999999999999999999975
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-139 Score=1144.96 Aligned_cols=823 Identities=33% Similarity=0.516 Sum_probs=709.9
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++.+|+++|++||+++ .|.|+++|.+.+++++.+..++||+.++.++.|++ +.+..++|+|+|+.+.++++
T Consensus 61 Li~iLL~sA~ISfvl~--------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~ 131 (972)
T KOG0202|consen 61 LILILLLSAAISFVLA--------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILAR 131 (972)
T ss_pred HHHHHHHHHHHHHHHH--------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehh
Confidence 5789999999999998 47789999999999999999999999999999986 45678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCccccc-------------CCCCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~-------------~~~~~v~~Gt~v~~g~~~~~V~ 148 (845)
+|||||||.++.||+||||.|+++..++.||||.|||||.|+.|. ++.|++|+||.|..|+++|+|+
T Consensus 132 eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi 211 (972)
T KOG0202|consen 132 ELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVI 211 (972)
T ss_pred ccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEE
Confidence 999999999999999999999999999999999999999999993 2456899999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
.||.+|++|++...+++.++.+||||++++.+.+.+..++.++++.+.++-+ +++.... .-+..+....++|
T Consensus 212 ~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~~p~-------~~g~~fk~~~~~f 283 (972)
T KOG0202|consen 212 GTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNI-GHFLDPV-------HGGSWFKGALYYF 283 (972)
T ss_pred eccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhh-hhhcccc-------ccccchhchhhhh
Confidence 9999999999999999999889999999999999998665555554444311 1111000 0111223577899
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 308 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~ 308 (845)
..++++.++++|+|||+.++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++++.+......
T Consensus 284 ~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~ 363 (972)
T KOG0202|consen 284 KIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV 363 (972)
T ss_pred hHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876543211
Q ss_pred ------CCCCCCC----------CCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHH
Q 003127 309 ------NSKGTPA----------FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA 372 (845)
Q Consensus 309 ------~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~ 372 (845)
+....+. .....+.+.+..+......||++.+..++.+.+...|.|+|.||..++.+.+..-..
T Consensus 364 ~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~ 443 (972)
T KOG0202|consen 364 DEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTR 443 (972)
T ss_pred cccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcch
Confidence 1111111 011223345566677777888887776655555669999999999999999876322
Q ss_pred ---------------hhhhcceEEEecCCCCCceEEEEEEcCCC--eEEEEEeCcHHHHHHhchhccccCC-ceecCCHH
Q 003127 373 ---------------ERQASKIVKVEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEA 434 (845)
Q Consensus 373 ---------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~--~~~~~~kGa~~~il~~~~~~~~~~~-~~~~~~~~ 434 (845)
..+.++..+++||+|+||+|++.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...|+++.
T Consensus 444 ~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 444 STNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred hhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 22345666999999999999999986554 4899999999999999988877666 55899999
Q ss_pred HHHHHHHHHHHHHHhhchhhhheeeecCCC--------CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEE
Q 003127 435 AVNHLNETIEKFASEALRTLCLACMEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 506 (845)
Q Consensus 435 ~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~--------~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v 506 (845)
.|+.+.+...+++++|+|||++|+++.+.. ....+...|.|++|+|++++.||+|++++++|+.|+++||+|
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV 603 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRV 603 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEE
Confidence 999999999999999999999999977741 123456789999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEE
Q 003127 507 RMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 582 (845)
Q Consensus 507 ~~~TGd~~~ta~~ia~~lgi~~~~~----~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~ 582 (845)
+|+|||+..||.++|+++|+...+. .+++|.+++.++++++.+......+|+|++|.+|.++|+.||++ |+.|+|
T Consensus 604 ~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAM 682 (972)
T KOG0202|consen 604 IMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAM 682 (972)
T ss_pred EEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEe
Confidence 9999999999999999999988776 78999999999999999999999999999999999999999999 999999
Q ss_pred EcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 583 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 662 (845)
Q Consensus 583 ~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 662 (845)
+|||.||+|+||.||+|||||.+|+|++|+|||+|+.||||++|+.+++|||.+|+|+++|+.|+++.|+..+...++.+
T Consensus 683 TGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~a 762 (972)
T KOG0202|consen 683 TGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTA 762 (972)
T ss_pred cCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHH---HHHHhc-
Q 003127 663 CLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIW---YLQTRG- 738 (845)
Q Consensus 663 ~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 738 (845)
.+..+.|++|+|+||+|+++|.+|+-+|+.+|++.|+|++|||++++.+++.+.++.++..+++...... ...+.+
T Consensus 763 a~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~ 842 (972)
T KOG0202|consen 763 AFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA 842 (972)
T ss_pred HhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999998887766533221 111111
Q ss_pred ccc--------cc--------CCCC-CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHHHHHHHHHHH
Q 003127 739 KAV--------FR--------LDGP-DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLF 800 (845)
Q Consensus 739 ~~~--------~~--------~~~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~ 800 (845)
... |. .++. ....-..|++|..+++..+||.+++++- ..++|. ++|+|+||..++.+++++
T Consensus 843 ~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se-~~slf~~~~~~N~~l~~ai~~S~~~ 921 (972)
T KOG0202|consen 843 DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSE-NKSLFTMPPWSNRWLLWAIALSFVL 921 (972)
T ss_pred CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccC-CcceEEecccccHHHHHHHHHHHHh
Confidence 000 00 0000 0011235899999999999999999964 445665 889999999999999999
Q ss_pred HH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 801 QI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 801 ~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
|+ +|+|+++..|+++|+++..|++++.+++.+++++|++|++.
T Consensus 922 ~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~ 966 (972)
T KOG0202|consen 922 HFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIA 966 (972)
T ss_pred hheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 85 56899999999999999999999999999999999999874
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=8.9e-130 Score=1185.01 Aligned_cols=832 Identities=53% Similarity=0.840 Sum_probs=725.1
Q ss_pred hHHHHHHHHHHHHHHhhcc-----cCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIAT-----EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~-----~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|++++++|+++|+.. .++..+|.+++.++++++++++++++++++++++++++++..++.+++|+|||+++
T Consensus 98 ~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~ 177 (941)
T TIGR01517 98 TLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 177 (941)
T ss_pred HHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 4678999999999988542 34455899999999999999999999999999999999876667799999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC-CCeEEeccEEEeceEEEEEEEEeecch
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 155 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~-~~~v~~Gt~v~~g~~~~~V~~tG~~T~ 155 (845)
+|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|++||.+|+
T Consensus 178 ~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~ 257 (941)
T TIGR01517 178 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSF 257 (941)
T ss_pred EEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcH
Confidence 9999999999999999999999999999997799999999999999999754 468999999999999999999999999
Q ss_pred hhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHH
Q 003127 156 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 235 (845)
Q Consensus 156 ~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 235 (845)
+||+.+.+.+.+ +++|++++++++.+.+.++++.++++++++++..+.......+.. ........+...+..+++++
T Consensus 258 ~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~al~ll 334 (941)
T TIGR01517 258 GGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIAVTIV 334 (941)
T ss_pred HHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHHHHHH
Confidence 999999888765 458999999999999999888888777776554332221111100 00001125677888999999
Q ss_pred HhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCC
Q 003127 236 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 315 (845)
Q Consensus 236 ~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~ 315 (845)
+++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++..+..++.++.
T Consensus 335 v~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----- 409 (941)
T TIGR01517 335 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV----- 409 (941)
T ss_pred HhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999876654432211
Q ss_pred CCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEE
Q 003127 316 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 395 (845)
Q Consensus 316 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~svi 395 (845)
....++...+.+..++.+|+......++.+..+..|||+|.|+++++.+.+.+....+..+++++.+||+|+||+|+++
T Consensus 410 -~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv 488 (941)
T TIGR01517 410 -LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVV 488 (941)
T ss_pred -cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEE
Confidence 0112233445555666666544322222333456899999999999998887776666678888999999999999999
Q ss_pred EEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCc
Q 003127 396 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEG 475 (845)
Q Consensus 396 v~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~ 475 (845)
++.+++++++++|||||.++++|+.+.+.+|...++++ .++.+.+..++++++|+|++++|||+++.+.....+..|+|
T Consensus 489 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~ 567 (941)
T TIGR01517 489 VKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGG 567 (941)
T ss_pred EEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccC
Confidence 99877779999999999999999987766787778877 77889999999999999999999999875433233345789
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
++|+|+++++||+|++++++|++||++|++++|+|||++.||.++|+++|+..++..+++|++++.+.++++.+.+.+..
T Consensus 568 l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~ 647 (941)
T TIGR01517 568 LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLR 647 (941)
T ss_pred cEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCe
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRS 635 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~ 635 (845)
+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++||||||||.+|+|.||++||+++.+|++..+.+++++||+
T Consensus 648 Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~ 726 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRN 726 (941)
T ss_pred EEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999998 99999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHH
Q 003127 636 VYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV 715 (845)
Q Consensus 636 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~ 715 (845)
+|+|+++++.|.+++|+..+++.+++.++.+++|++++|++|+|+++|.+|+++++.++|++++|++||++++++++++.
T Consensus 727 ~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~ 806 (941)
T TIGR01517 727 VYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRS 806 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHH
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCC-----CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHH
Q 003127 716 MWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVF 790 (845)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~ 790 (845)
+|.+++.++++++++.+++++.+..+++..+. ......+|++|.+++++|++|.+++|+.+..++|+++++|+++
T Consensus 807 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 886 (941)
T TIGR01517 807 MWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIF 886 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHH
Confidence 99999999999988777766554444432221 1224578999999999999999999965444788888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhccC
Q 003127 791 VAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQV 844 (845)
Q Consensus 791 ~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~~ 844 (845)
+.++++++++|++++++++.+|++.|+++.+|+++++++++.+++.|+.|++|.
T Consensus 887 ~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 887 VTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999984
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.7e-126 Score=1151.85 Aligned_cols=810 Identities=28% Similarity=0.402 Sum_probs=682.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++++|++||++|++++ .|.++..+++.+++..+++.+++++.++..+++++. .+.+++|+|||++++|+++
T Consensus 64 ~~~iL~~aails~~~~--------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~ 134 (1053)
T TIGR01523 64 MCMVLIIAAAISFAMH--------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSH 134 (1053)
T ss_pred HHHHHHHHHHHHHHHh--------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHh
Confidence 5688999999999997 699999999999999999999999999999999875 4568999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC--------------CCCeEEeccEEEeceEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA--------------LNPFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~--------------~~~~v~~Gt~v~~g~~~~~V 147 (845)
||||||||.+++||+|||||+|++++++.||||+|||||.|+.|.. ..|++|+||.|++|+++++|
T Consensus 135 eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vV 214 (1053)
T TIGR01523 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGIC 214 (1053)
T ss_pred hCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEE
Confidence 9999999999999999999999999889999999999999999952 13679999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCC-----------------------------------CCChhHHHHHHHHHHHHHHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGD-----------------------------------DETPLQVKLNGVATIIGKIGLFFA 192 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~-----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~ 192 (845)
++||.+|++||+.+.+.+.+. .+||+|++++++++++..++++++
T Consensus 215 vatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~ 294 (1053)
T TIGR01523 215 IATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFA 294 (1053)
T ss_pred EEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998854321 249999999999998888777776
Q ss_pred HHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhh
Q 003127 193 VVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 272 (845)
Q Consensus 193 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e 272 (845)
++++++.... .+...+.++++++++++|++||+.++++++.++++|+++|+++|+++++|
T Consensus 295 ~~~~~~~~~~--------------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avE 354 (1053)
T TIGR01523 295 IIVMAAHKFD--------------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALE 354 (1053)
T ss_pred HHHHHHHhhh--------------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhh
Confidence 6665531100 12345667889999999999999999999999999999999999999999
Q ss_pred hccCcEEEEeccCCccCCCCeEEEEEEEcC-eeEEecCC--CCCCC------------------------C--------C
Q 003127 273 TMGSATSICSDKTGTLTTNHMTVLKACICE-EIKEVDNS--KGTPA------------------------F--------G 317 (845)
Q Consensus 273 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~-~~~~~~~~--~~~~~------------------------~--------~ 317 (845)
+||++++||+|||||||+|+|+|++++..+ ..+..++. ...+. . .
T Consensus 355 tLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1053)
T TIGR01523 355 ALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELK 434 (1053)
T ss_pred hccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999998765 22322211 00000 0 0
Q ss_pred -CC----CChhHHHHHHHHHHhcCCceEEec-CCCceEEcCCchHHHHHHHHHHcCCChH------Hh------------
Q 003127 318 -SS----IPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE------------ 373 (845)
Q Consensus 318 -~~----~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~p~e~al~~~~~~~~~~~~------~~------------ 373 (845)
.. ..+.....+..+..+||.+....+ +++.+...|||+|.||++++.+.|++.. ..
T Consensus 435 ~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1053)
T TIGR01523 435 EIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLS 514 (1053)
T ss_pred ccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccc
Confidence 00 011123335555666777665433 2233455799999999999998886421 11
Q ss_pred -------hhhcceEEEecCCCCCceEEEEEEcCCC-eEEEEEeCcHHHHHHhchhccccCC-ceecCCHHHHHHHHHHHH
Q 003127 374 -------RQASKIVKVEPFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIE 444 (845)
Q Consensus 374 -------~~~~~~l~~~~F~s~~k~~sviv~~~~~-~~~~~~kGa~~~il~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 444 (845)
+..+++++++||+|+||||+++++.+++ .+++|+|||||.|+++|++....+| +..|++++.++++.+..+
T Consensus 515 ~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~ 594 (1053)
T TIGR01523 515 QHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANME 594 (1053)
T ss_pred cccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHH
Confidence 2247889999999999999999987544 5889999999999999997665444 567899999999999999
Q ss_pred HHHHhhchhhhheeeecCCCCC---------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHH
Q 003127 445 KFASEALRTLCLACMEIGNEFS---------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN 515 (845)
Q Consensus 445 ~~~~~G~r~l~~a~~~i~~~~~---------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ 515 (845)
+|+++|+||+++|||+++.+.. ..++..|+|++|+|+++++||+|++++++|++||++||+++|+|||++.
T Consensus 595 ~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~ 674 (1053)
T TIGR01523 595 SLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPE 674 (1053)
T ss_pred HHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999999999999999875311 0123568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCccC----------CceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcC
Q 003127 516 TAKAIARECGILTD----------NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 585 (845)
Q Consensus 516 ta~~ia~~lgi~~~----------~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GD 585 (845)
||.++|+++|+..+ ...+++|++++.++++++.+...+..+|+|++|+||.++|+.+|++ |++|+|+||
T Consensus 675 tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GD 753 (1053)
T TIGR01523 675 TAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGD 753 (1053)
T ss_pred HHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCC
Confidence 99999999999754 3479999999999999999999889999999999999999999998 999999999
Q ss_pred CccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 665 (845)
Q Consensus 586 g~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 665 (845)
|.||+|||++||||||||.+|+|.+|++||+++.+|+|.++.+++++||++|+|+++++.|.+++|+..+++.+++.++.
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~ 833 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFR 833 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999988887774
Q ss_pred ---C--CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 003127 666 ---G--NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA 740 (845)
Q Consensus 666 ---~--~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (845)
| +.||+++|++|+|+++|.+|+++++.|+|++++|++||++++++++++.++..++..+++.+...+..++...+
T Consensus 834 ~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 913 (1053)
T TIGR01523 834 DENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILY 913 (1053)
T ss_pred cccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 47999999999999999999999999999999999999999999999999988888888876655433321100
Q ss_pred cc--c---CC-----CC--CccchhhhHHHHHHHHHHHhccccccccccccccc----------------CCchhHHHHH
Q 003127 741 VF--R---LD-----GP--DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK----------------GILKNYVFVA 792 (845)
Q Consensus 741 ~~--~---~~-----~~--~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~ 792 (845)
.+ + .. +. .....++|++|.+++++|+++.+++|+. +.++|+ +.++|++++.
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~ 992 (1053)
T TIGR01523 914 GFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDF-DNSFFNLHGIPDGDSNFKEFFHSIVENKFLAW 992 (1053)
T ss_pred hccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcC-chhhhhcCccccccccccccccCCccCHHHHH
Confidence 00 0 00 00 1123578999999999999999999953 445554 2579999999
Q ss_pred HHHHHHHHHH--HHHHHhhh-cccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 793 VLTCTVLFQI--IIIELLGT-FANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 793 ~~~~~~~~~~--~~v~~~~~-~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++++++++++ +++|+++. +|+++|+++ .|+++++++++.++++|++|++.
T Consensus 993 ~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 993 AIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888874 55788885 999999997 79999999999999999999875
No 5
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.2e-125 Score=1141.94 Aligned_cols=829 Identities=31% Similarity=0.464 Sum_probs=705.8
Q ss_pred hHHHHHHHHHHHHHHhhcccCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEe
Q 003127 2 TLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKIS 79 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~ 79 (845)
++++|+++|++|++++.+++++ ..+|.++..+++.+++...++.+++++.++..+++.+ ..+.+++|+|||++++|+
T Consensus 9 ~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViRdg~~~~I~ 87 (917)
T TIGR01116 9 LVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLRDGRWSVIK 87 (917)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEECCEEEEEE
Confidence 5789999999999998765322 2479999999999999999999999999999998876 456789999999999999
Q ss_pred cCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC------------CCeEEeccEEEeceEEEEE
Q 003127 80 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 80 ~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~------------~~~v~~Gt~v~~g~~~~~V 147 (845)
++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|
T Consensus 88 ~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V 167 (917)
T TIGR01116 88 AKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVV 167 (917)
T ss_pred HHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEE
Confidence 9999999999999999999999999998899999999999999999642 3789999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+++.+++.+++|+|+++++++..+..+++++++++++++...+. . . . ...+....+...
T Consensus 168 ~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~-~--~----~~~~~~~~~~~~ 239 (917)
T TIGR01116 168 VRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-D-P--A----LGGGWIQGAIYY 239 (917)
T ss_pred EEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-c--c----ccchhHHHHHHH
Confidence 999999999999999998888899999999999999888777766665554322111 0 0 0 001111245566
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCee---
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI--- 304 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~--- 304 (845)
+..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++..+..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred ---EEecCCCCCCCCC--------CCCChhHHHHHHHHHHhcCCceEEecCC-CceEEcCCchHHHHHHHHHHcCCChHH
Q 003127 305 ---KEVDNSKGTPAFG--------SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGLLLGGDFQA 372 (845)
Q Consensus 305 ---~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~~~~~~~ 372 (845)
+..++....+... ....+...+.+..+..+||++....+++ +.....|||+|.|+++++.+.|.+...
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 2222211111100 0001223445566677788776644322 223346999999999999988866432
Q ss_pred ----------------hhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHH
Q 003127 373 ----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAV 436 (845)
Q Consensus 373 ----------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~ 436 (845)
.++.+++++++||+|+||||+++++.+ +++++|+|||||.|+++|++++.++|...|++++.+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~ 478 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMK 478 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHH
Confidence 234677999999999999999999864 568999999999999999988777788899999999
Q ss_pred HHHHHHHHHHHH-hhchhhhheeeecCCCCC-------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEE
Q 003127 437 NHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRM 508 (845)
Q Consensus 437 ~~~~~~~~~~~~-~G~r~l~~a~~~i~~~~~-------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~ 508 (845)
+++.+..++|++ +|+||+++|||.++.+.. ...+.+|+|++|+|+++++||+|++++++|++||++|++++|
T Consensus 479 ~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~m 558 (917)
T TIGR01116 479 NTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIM 558 (917)
T ss_pred HHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999999 999999999999865321 112456899999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEc
Q 003127 509 VTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 584 (845)
Q Consensus 509 ~TGd~~~ta~~ia~~lgi~~~~~----~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~G 584 (845)
+|||+..+|.++|+++|+..++. ..++|+++..+.+++..+...+..+|+|++|+||.++++.+|+. |++|+|+|
T Consensus 559 iTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~va~iG 637 (917)
T TIGR01116 559 ITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ-GEIVAMTG 637 (917)
T ss_pred ecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-CCeEEEec
Confidence 99999999999999999986543 47899999999998888888889999999999999999999987 99999999
Q ss_pred CCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003127 585 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 664 (845)
Q Consensus 585 Dg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~ 664 (845)
||.||+|||++||+||||| +|++.+|++||+++.+|++..+.+++++||++|+|+++++.|.+++|+..+++.+++.++
T Consensus 638 DG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 638 DGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred CCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999998888
Q ss_pred cCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003127 665 TGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRL 744 (845)
Q Consensus 665 ~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (845)
..+.|++++|++|+|+++|.+|+++++.++|++++|++||+.++++++++.++..|++.+++++++.+..+++.....+.
T Consensus 717 ~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 796 (917)
T TIGR01116 717 GIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHF 796 (917)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 88899999999999999999999999999999999999999999999999999999999999987644332211110010
Q ss_pred -----------C---CC-----CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHHHHHHHHHHHHHHH
Q 003127 745 -----------D---GP-----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQIII 804 (845)
Q Consensus 745 -----------~---~~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~ 804 (845)
+ +. .....++|++|.+++++|++|.+++|+ .+.++|+ ++++|++++.++++++++|+++
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~ 875 (917)
T TIGR01116 797 TGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALS-EDQSLLRMPPWVNKWLIGAICLSMALHFLI 875 (917)
T ss_pred ccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcC-CcccccccCCccCHHHHHHHHHHHHHHHHH
Confidence 0 00 012356899999999999999999996 4557776 7789999999999999888654
Q ss_pred --HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 805 --IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 805 --v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|+++.+|++.|+++.+|+++++++++.++++|++|++.
T Consensus 876 ~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 876 LYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999875
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=5.8e-124 Score=1136.44 Aligned_cols=820 Identities=28% Similarity=0.399 Sum_probs=682.4
Q ss_pred hHHHHHHHHHHHHHHhhcccC-----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIATEG-----WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~-----~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|+++++++++...+... ....|.+++.+++.+++..+++.+++++.++..+++.+ ..+.+++|+|||+++
T Consensus 74 ~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~ 152 (997)
T TIGR01106 74 FSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKM 152 (997)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEE
Confidence 467888999998876433211 11357777765555555555555555555555555554 346689999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC---------CeEEeccEEEeceEEEEE
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~---------~~v~~Gt~v~~g~~~~~V 147 (845)
+|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ |++|+||.+.+|+++++|
T Consensus 153 ~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V 232 (997)
T TIGR01106 153 SINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIV 232 (997)
T ss_pred EeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEE
Confidence 99999999999999999999999999999988999999999999999996542 579999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+.+.+.+.+++|+++.++++.+.+..+++++++++++++.. . +. .+...
T Consensus 233 ~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~----------~~~~~ 294 (997)
T TIGR01106 233 VNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------TWLEA 294 (997)
T ss_pred EEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h-----cC----------CHHHH
Confidence 999999999999998888777789999999999999988877777665554321 1 11 34567
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEe
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 307 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~ 307 (845)
+.+++++++++|||+||++++++++.+.++|+++|+++|+++++|+||++++||+|||||||+|+|+|.+++.++..+..
T Consensus 295 ~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 374 (997)
T TIGR01106 295 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 374 (997)
T ss_pred HHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEec
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999998877654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 308 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
+.................+.+...+.+||++....++.+ +....|||+|.|+++++.+.+.+....++.+++++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~ 454 (997)
T TIGR01106 375 DTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEI 454 (997)
T ss_pred CCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEe
Confidence 322111000011111234455566777877665433222 2345799999999999988776666677789999999
Q ss_pred cCCCCCceEEEEEEcC---CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 384 PFNSVKKQMGVVIELP---EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~---~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
||+|+||||+++++.. ++.+++++|||||.|+++|++++ .+|+..+++++.++.+.+..++++++|+||+++|||+
T Consensus 455 pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~ 533 (997)
T TIGR01106 455 PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533 (997)
T ss_pred ccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEee
Confidence 9999999999988642 24688999999999999999876 5788889999999999999999999999999999999
Q ss_pred cCCCCCC--------CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--
Q 003127 461 IGNEFSA--------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-- 530 (845)
Q Consensus 461 i~~~~~~--------~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-- 530 (845)
++.+... +.+..|+|++|+|+++++||+|++++++|++|+++|++++|+|||++.+|.++|+++|+..++
T Consensus 534 l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 613 (997)
T TIGR01106 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613 (997)
T ss_pred cCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc
Confidence 8653111 112348899999999999999999999999999999999999999999999999999997542
Q ss_pred ----------------------ceeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC
Q 003127 531 ----------------------GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 586 (845)
Q Consensus 531 ----------------------~~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg 586 (845)
..+++|++++.+.++++.+.+.+. .+|||++|+||.++|+.+|+. |++|+|+|||
T Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG 692 (997)
T TIGR01106 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDG 692 (997)
T ss_pred chhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCC
Confidence 268999999999999999888765 499999999999999999988 9999999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 666 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 666 (845)
.||+|||++||||||||++|+|.+|++||+++.+|+|.++++++++||++|.|+++++.|.++.|+..+++.+++.++..
T Consensus 693 ~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 772 (997)
T TIGR01106 693 VNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 772 (997)
T ss_pred cccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCC-CCCCcCHHHHHHH-HHHHHHHHHHHHHHHHhcc-----
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR-KGNFISNVMWRNI-LGQSLYQFLIIWYLQTRGK----- 739 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 739 (845)
++|++++|++|+|+++|++|+++++.|++++++|++||+++ +++++++.++..+ +..++++++..++.++...
T Consensus 773 ~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~ 852 (997)
T TIGR01106 773 PLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGF 852 (997)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999975 6789998877554 3446666655444332111
Q ss_pred ---ccccC---------CCC--C------c------cchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHH
Q 003127 740 ---AVFRL---------DGP--D------P------DLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAV 793 (845)
Q Consensus 740 ---~~~~~---------~~~--~------~------~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 793 (845)
..++. ++. . . ...++|++|.+++++|++|.++||+ ++.++|++.++|++++.+
T Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~ 931 (997)
T TIGR01106 853 LPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFG 931 (997)
T ss_pred ccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHH
Confidence 01111 000 0 0 0146899999999999999999996 566788755899999999
Q ss_pred HHHHHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 794 LTCTVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 794 ~~~~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+++.+++++ .++|+++.+|++.|+++.+|+++++++++.+++.++.|++.
T Consensus 932 ~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 983 (997)
T TIGR01106 932 LFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLII 983 (997)
T ss_pred HHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877764 45677899999999999999999999999999999999764
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-124 Score=1124.56 Aligned_cols=802 Identities=36% Similarity=0.545 Sum_probs=687.7
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++++|++++++|++++...... .+...+...++++.++...++++.++..+++++.. +.+++|+|||++++|+++
T Consensus 82 ~~~iL~~~a~~s~~~~~~~~~~----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~ 156 (917)
T COG0474 82 FIILLLVAALLSAFVGDWVDAG----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPAS 156 (917)
T ss_pred HHHHHHHHHHHHHHhhcccccC----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHH
Confidence 5788999999999998421100 55667777778888888899999999999888754 678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCccccc-------------CCCCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~-------------~~~~~v~~Gt~v~~g~~~~~V~ 148 (845)
||||||||++++||+||||++|+++++++||||+|||||.|+.|. +.+|++|+||.+++|++.++|+
T Consensus 157 eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVv 236 (917)
T COG0474 157 ELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVV 236 (917)
T ss_pred HCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEE
Confidence 999999999999999999999999998899999999999999995 4578999999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
+||.+|++|++...+.......+|++++++++.+.+..++++++++++++... . .+. .+.+.+
T Consensus 237 aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~---~----~~~----------~~~~~~ 299 (917)
T COG0474 237 ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF---R----GGN----------GLLESF 299 (917)
T ss_pred EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----cCc----------cHHHHH
Confidence 99999999999999998866789999999999999988888887777766411 1 010 267889
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 308 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~ 308 (845)
..+++++++++|++||+.++++++.+.++|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+...+.+
T Consensus 300 ~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~ 379 (917)
T COG0474 300 LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID 379 (917)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999885111000
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCC--ChHHhhhhcceEEEecCC
Q 003127 309 NSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFN 386 (845)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~--~~~~~~~~~~~l~~~~F~ 386 (845)
. ......+....+...+.+||+.....+ + ++..+||+|.||++++.+.|. +....+..+++++.+||+
T Consensus 380 ------~-~~~~~~~~~~~~l~~~~lc~~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFd 449 (917)
T COG0474 380 ------D-KDLKDSPALLRFLLAAALCNSVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFD 449 (917)
T ss_pred ------c-cccccchHHHHHHHHHHhcCccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCC
Confidence 0 011111223345556677887666544 3 677999999999999999998 777777788999999999
Q ss_pred CCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCC
Q 003127 387 SVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 466 (845)
Q Consensus 387 s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~ 466 (845)
|+|||||++++.+++++++++|||||.|+++|+.. ++..+++++.++.+++..++|+++|+||+++|||..+....
T Consensus 450 S~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~ 525 (917)
T COG0474 450 SERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEK 525 (917)
T ss_pred CCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence 99999999999777779999999999999999875 66778999999999999999999999999999998766543
Q ss_pred CCC-CCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCC
Q 003127 467 ADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKS 543 (845)
Q Consensus 467 ~~~-~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g~~~~~~~ 543 (845)
... +..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+..+.. .+++|.++..+.
T Consensus 526 ~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~ 605 (917)
T COG0474 526 DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS 605 (917)
T ss_pred cchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC
Confidence 222 57899999999999999999999999999999999999999999999999999999988763 499999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.++.+|||++|+||.++|+.+|++ |+.|+|+|||.||+||||+||||||||.+|+|.+|++||+++.++++
T Consensus 606 ~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~ 684 (917)
T COG0474 606 DEELAELVEELSVFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNF 684 (917)
T ss_pred HHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcH
Confidence 99999999999999999999999999999999 99999999999999999999999999988999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CChhhHHHHHHHHHHHHHhhhhhccCCCCcccccC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKR 702 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~ 702 (845)
..+..+++|||++|.|+++++.|.+++|+..++..+++.+++.+ .|++++|++|+|+++|.+|+++++.++++.+.|++
T Consensus 685 ~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~ 764 (917)
T COG0474 685 ATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKR 764 (917)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCccccccc
Confidence 99999999999999999999999999999999999998888777 89999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc--CCCCC-ccchhhhHHHHHHHHHHHhccccccccccc
Q 003127 703 SPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV-FR--LDGPD-PDLILNTLIFNTFVFCQVFNEISSREMEKI 778 (845)
Q Consensus 703 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 778 (845)
||+++++.++++..+..+++...++..++.++.|..... +. ..+.. ......|++|.+++++|+++.+.+|. .+.
T Consensus 765 ~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~-~~~ 843 (917)
T COG0474 765 PPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRS-RGR 843 (917)
T ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Confidence 999999999999998886666555555444433222111 11 01111 14467899999999999999999994 445
Q ss_pred cccc-CCchhHHHHHHHHHHHHHHHHH--HHHhh-hcccccCCChHHHHHHHHHH--HHHHHHHHHHhh
Q 003127 779 NVFK-GILKNYVFVAVLTCTVLFQIII--IELLG-TFANTTPLNLQQWFVSILLG--FLGMPIAAVLKL 841 (845)
Q Consensus 779 ~~~~-~~~~n~~~~~~~~~~~~~~~~~--v~~~~-~~f~~~~l~~~~w~~~~~~~--~~~~~~~~i~K~ 841 (845)
+++. .+++|+.++.+++..++++++. .++.. ..|+..|+++..|++++... ...+...+.+|.
T Consensus 844 ~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 844 PFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred chhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665 4578999999988887776543 45556 68999999988899888887 444555555554
No 8
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=4.4e-122 Score=1111.10 Aligned_cols=792 Identities=32% Similarity=0.509 Sum_probs=687.2
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
+.++|++++++|+++| .|.+++.+++.++++..++.+++++.++..+++.+. .+.+++|+|||++++|+++
T Consensus 63 ~~~~L~~aa~ls~~~g--------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~ 133 (884)
T TIGR01522 63 LILLLIASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLAS 133 (884)
T ss_pred HHHHHHHHHHHHHHHc--------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHH
Confidence 4688999999999998 688998888888888889999999999888888764 4668999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC-------------CCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~-------------~~~v~~Gt~v~~g~~~~~V~ 148 (845)
||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|+
T Consensus 134 eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~ 213 (884)
T TIGR01522 134 TLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVV 213 (884)
T ss_pred HCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEE
Confidence 99999999999999999999999998799999999999999999754 25899999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
+||.+|++||+.+.+.+.+..++|+|+.++++++++.+++++++++++++. ++. +. .+...+
T Consensus 214 ~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~ 275 (884)
T TIGR01522 214 GTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMF 275 (884)
T ss_pred EecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHH
Confidence 999999999999999988888899999999999988776655444333321 111 11 356778
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEE-e
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-V 307 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~-~ 307 (845)
..++++++++|||+||++++++++.+.++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. .
T Consensus 276 ~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~ 355 (884)
T TIGR01522 276 TISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTML 355 (884)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeec
Confidence 889999999999999999999999999999999999999999999999999999999999999999999987664322 1
Q ss_pred cCCCCCCC--C------CCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcce
Q 003127 308 DNSKGTPA--F------GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 379 (845)
Q Consensus 308 ~~~~~~~~--~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~ 379 (845)
+.....+. . .....+...+.+......|+++....+ ..+..|||+|.|+++++.+.+.+ ..+..++.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~ 430 (884)
T TIGR01522 356 NAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIR 430 (884)
T ss_pred cCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcE
Confidence 11000000 0 000011122333444555665544322 12346899999999999887753 33446788
Q ss_pred EEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhhee
Q 003127 380 VKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 458 (845)
Q Consensus 380 l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~ 458 (845)
++.+||+|+||||+++++.+ ++++++++||+||.|+++|+.++..+|...+++++.++++.+..++++++|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 99999999999999998863 46789999999999999999888777888889998899999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 003127 459 MEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538 (845)
Q Consensus 459 ~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~ 538 (845)
+++ +++++|+|+++++||+||+++++|++|+++|++++|+|||+..+|.++|+++|+......+++|++
T Consensus 511 ~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~ 579 (884)
T TIGR01522 511 GPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEK 579 (884)
T ss_pred EcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHH
Confidence 864 357999999999999999999999999999999999999999999999999999877778899999
Q ss_pred cccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEe
Q 003127 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 618 (845)
Q Consensus 539 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~ 618 (845)
++.++++++.+.+.+..+|+|++|+||.++++.+|+. |+.|+|+|||.||+||+++||+|||||.+|++.++++||+++
T Consensus 580 l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl 658 (884)
T TIGR01522 580 LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMIL 658 (884)
T ss_pred hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEE
Confidence 9999999999999999999999999999999999998 999999999999999999999999999779999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcc
Q 003127 619 LDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGD 698 (845)
Q Consensus 619 ~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~ 698 (845)
.+|++..+.+++++||++|+|+++++.|.++.|+..+++.+++.++..+.|++++|++|+|+++|.+|+++++.|+|+++
T Consensus 659 ~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~ 738 (884)
T TIGR01522 659 TDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKD 738 (884)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChh
Confidence 99999999999999999999999999999999999998888888888899999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhccccccccccc
Q 003127 699 LMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKI 778 (845)
Q Consensus 699 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 778 (845)
+|++||++++++++++.+|..++.++++++++.+++++... . .+ .....++|++|.+++++|++|.+++|+ .+.
T Consensus 739 ~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~--~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~ 812 (884)
T TIGR01522 739 VMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM--Q--DG-VITARDTTMTFTCFVFFDMFNALACRS-QTK 812 (884)
T ss_pred HhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH--c--CC-cchhhHHHHHHHHHHHHHHHHHHHHcc-CCc
Confidence 99999999999999999999999999988776555443211 1 11 112246899999999999999999996 466
Q ss_pred cccc-CCchhHHHHHHHHHHHHHHHH--HHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 779 NVFK-GILKNYVFVAVLTCTVLFQII--IIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 779 ~~~~-~~~~n~~~~~~~~~~~~~~~~--~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++|+ ++++|++++.+++++++++++ ++|+++.+|++.|+++.+|+++++++++.+++.|++|++.
T Consensus 813 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 813 SVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred cccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7786 778999999999999888864 4578999999999999999999999999999999999875
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.4e-117 Score=1065.05 Aligned_cols=775 Identities=26% Similarity=0.366 Sum_probs=643.7
Q ss_pred hHHHHHHHHHHHHHHhhcc---cCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECC-----
Q 003127 2 TLMILAVCALVSLVVGIAT---EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG----- 73 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~---~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g----- 73 (845)
++++|++++++|++++.+. ++....|.++..+++.+++..+++.+++++.++..+++.+.. +.+++|+|||
T Consensus 83 ~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~ 161 (903)
T PRK15122 83 FIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAE 161 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCC
Confidence 4689999999999997643 122347899998888888888889999999999999888744 5679999994
Q ss_pred -eEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC----------------------CCC
Q 003127 74 -FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNP 130 (845)
Q Consensus 74 -~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~----------------------~~~ 130 (845)
++++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|.. .++
T Consensus 162 g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n 241 (903)
T PRK15122 162 PVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPN 241 (903)
T ss_pred CeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccc
Confidence 899999999999999999999999999999999888999999999999999963 136
Q ss_pred eEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 003127 131 FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQE 210 (845)
Q Consensus 131 ~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 210 (845)
.+|+||.+.+|+++++|++||.+|++||+.+.+.+ ...++|++++++++.+.+..++..++.+++++. .+. .
T Consensus 242 ~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~----~ 313 (903)
T PRK15122 242 ICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFT----K 313 (903)
T ss_pred eEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhc----c
Confidence 89999999999999999999999999999999887 455699999999999888776655544443321 110 0
Q ss_pred CCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCC
Q 003127 211 GTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTT 290 (845)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~ 290 (845)
+ ++...+.+++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+
T Consensus 314 ~-----------~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~ 382 (903)
T PRK15122 314 G-----------DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQ 382 (903)
T ss_pred C-----------CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCccccc
Confidence 1 35667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCCh
Q 003127 291 NHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF 370 (845)
Q Consensus 291 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~ 370 (845)
|+|+|.+++..+.. .+ .+.+..+. .|+.. + ...+||+|.|+++++.+.+..
T Consensus 383 ~~m~V~~~~~~~~~----------------~~--~~~l~~a~-l~s~~-----~----~~~~~p~e~All~~a~~~~~~- 433 (903)
T PRK15122 383 DRIILEHHLDVSGR----------------KD--ERVLQLAW-LNSFH-----Q----SGMKNLMDQAVVAFAEGNPEI- 433 (903)
T ss_pred CeEEEEEEEcCCCC----------------Ch--HHHHHHHH-HhCCC-----C----CCCCChHHHHHHHHHHHcCch-
Confidence 99999987632210 00 12222222 22210 0 116899999999999887643
Q ss_pred HHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhh
Q 003127 371 QAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 450 (845)
Q Consensus 371 ~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 450 (845)
.....++.++++||++.+|+|+++++..++++++++||+||.++++|+.+. .+|...+++++.++++.+..++++++|
T Consensus 434 -~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G 511 (903)
T PRK15122 434 -VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADG 511 (903)
T ss_pred -hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCC
Confidence 223457888999999999999999987667789999999999999999765 467778899999999999999999999
Q ss_pred chhhhheeeecCCCCCC--CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 451 LRTLCLACMEIGNEFSA--DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 451 ~r~l~~a~~~i~~~~~~--~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
+|++++|||+++.+... .....|+|++|+|+++++||+||+++++|++||++||+++|+|||++.||.++|+++|+..
T Consensus 512 ~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~ 591 (903)
T PRK15122 512 FRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP 591 (903)
T ss_pred CEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 99999999988654321 1123578999999999999999999999999999999999999999999999999999963
Q ss_pred CCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH
Q 003127 529 DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 608 (845)
Q Consensus 529 ~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~ 608 (845)
+.+++|++++.++++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++|||||||| +|+|
T Consensus 592 --~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtd 667 (903)
T PRK15122 592 --GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGAD 667 (903)
T ss_pred --CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccH
Confidence 368999999999999999999999999999999999999999998 999999999999999999999999999 9999
Q ss_pred HHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhh
Q 003127 609 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGAL 688 (845)
Q Consensus 609 ~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~ 688 (845)
.||++||+++.+||+..+++++++||++|+|+++++.|.++.|+..++..++..++..+.|+++.|++|+|+++|. |++
T Consensus 668 vAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~l 746 (903)
T PRK15122 668 IAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQL 746 (903)
T ss_pred HHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999999999988887777666666689999999999999995 899
Q ss_pred hhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhc
Q 003127 689 ALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFN 768 (845)
Q Consensus 689 ~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~ 768 (845)
+++.|+|++++| +||++++++++++.++..-+..+++ ++..+++++.. +..+........+|..|.+++++|+++
T Consensus 747 al~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~t~~f~~l~~~q~~~ 821 (903)
T PRK15122 747 SLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIF-DITTFALMWFV---FAANSVEMQALFQSGWFIEGLLSQTLV 821 (903)
T ss_pred hhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHH---hccCcHhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999998776422222222 22222221111 110110100134688899999999999
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHH--HHHHHH--hhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 769 EISSREMEKINVFKGILKNYVFVAVLTCTVLFQ--IIIIEL--LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 769 ~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~v~~--~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
.+++|+ ++.++|++ ++.+..++.+++++ ++++|+ ++.+|+++|+++.+|+++++++++++++.|+.|.+
T Consensus 822 ~~~~R~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 822 VHMLRT-QKIPFIQS----TAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred HHhhCc-CCCCcCcc----hHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999995 34355654 33333343444443 345665 78999999999999999999999999999998844
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=9.5e-117 Score=1055.81 Aligned_cols=767 Identities=23% Similarity=0.360 Sum_probs=630.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEC------CeE
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFR 75 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~------g~~ 75 (845)
+.++|++++++|+++| .|.++..+++.+++..+++.+++++.++..+++.+. .+.+++|+|| |++
T Consensus 105 ~~~lL~~aa~ls~~~~--------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l-~~~~a~ViR~g~~~~~g~~ 175 (902)
T PRK10517 105 FNILLTILGAISYATE--------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAM-VSNTATVLRVINDKGENGW 175 (902)
T ss_pred HHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCccCCCCeE
Confidence 3567889999999987 688988888888888888888888888888888765 4567999999 789
Q ss_pred EEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC------------CeEEeccEEEeceE
Q 003127 76 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSC 143 (845)
Q Consensus 76 ~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~------------~~v~~Gt~v~~g~~ 143 (845)
++|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ +.+|+||.+.+|++
T Consensus 176 ~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~ 255 (902)
T PRK10517 176 LEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTA 255 (902)
T ss_pred EEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeE
Confidence 999999999999999999999999999999988999999999999999997542 57999999999999
Q ss_pred EEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHH
Q 003127 144 KMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 223 (845)
Q Consensus 144 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (845)
+++|++||.+|++||+.+.+.+.+.+++|+|+.++++++++..++++++.++++++. +. .+ +
T Consensus 256 ~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~----~~-----------~ 317 (902)
T PRK10517 256 QAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YT----KG-----------D 317 (902)
T ss_pred EEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---Hh----cC-----------C
Confidence 999999999999999999999888888999999999999988877766665554421 11 01 3
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCe
Q 003127 224 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 303 (845)
Q Consensus 224 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~ 303 (845)
+...+..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++...
T Consensus 318 ~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~-- 395 (902)
T PRK10517 318 WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI-- 395 (902)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC--
Confidence 556788899999999999999999999999999999999999999999999999999999999999999999875311
Q ss_pred eEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 304 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
.+. ...+.+ ...+.|+.. . ...+||.|.|+++++...+ .....+.++.++.+
T Consensus 396 ----~~~------------~~~~ll-~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~ 447 (902)
T PRK10517 396 ----SGK------------TSERVL-HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEI 447 (902)
T ss_pred ----CCC------------CHHHHH-HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEe
Confidence 000 011222 222223221 0 1168999999999987543 12234567888999
Q ss_pred cCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 384 PFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
||++++|+|+++++..++.+.+++||+||.++++|+.+. .++...+++++.++++.+..++++++|+|++++|||+++.
T Consensus 448 pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~ 526 (902)
T PRK10517 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPA 526 (902)
T ss_pred eeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCc
Confidence 999999999999987677788999999999999999765 4566788999889999999999999999999999998865
Q ss_pred CCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 464 EFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 464 ~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
+........|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||. +..+++|++++.++
T Consensus 527 ~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~ 604 (902)
T PRK10517 527 REGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLS 604 (902)
T ss_pred cccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCC
Confidence 4322212247899999999999999999999999999999999999999999999999999995 34789999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++|||||||| +|+|.||++||+++.+|++
T Consensus 605 ~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~ 682 (902)
T PRK10517 605 DDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSL 682 (902)
T ss_pred HHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCCh
Confidence 99999999999999999999999999999998 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRS 703 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~ 703 (845)
..+++++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|+++++.|++++++|++|
T Consensus 683 ~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p 761 (902)
T PRK10517 683 MVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKP 761 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCC
Confidence 999999999999999999999999999999988888777766568999999999999999 7899999999999999998
Q ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhcccccccccccccccC
Q 003127 704 PVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKG 783 (845)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~ 783 (845)
|+ |+...+.+. +...+++.+++.+..++...+.++..........++..|.+++++|+++.+++|+ .+.++|
T Consensus 762 ~r-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~-~~~~~~-- 833 (902)
T PRK10517 762 QR-WNPADLGRF----MVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRT-RRIPFI-- 833 (902)
T ss_pred CC-CCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhcc-CCCCcc--
Confidence 87 332223222 3333444332222211111111121111000124456699999999999999995 333444
Q ss_pred CchhHHHHHHHHHHHHHH--HHHHH--HhhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 784 ILKNYVFVAVLTCTVLFQ--IIIIE--LLGTFANTTPLN--LQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 784 ~~~n~~~~~~~~~~~~~~--~~~v~--~~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|++.+..++.+++++ .+++| +++.+|++.|++ +..|++++.++++ ++.|+.|.+.
T Consensus 834 --~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~ 895 (902)
T PRK10517 834 --QSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFY 895 (902)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4555555555555544 34455 678999999999 6777777776665 6688888543
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3e-115 Score=1044.50 Aligned_cols=766 Identities=25% Similarity=0.364 Sum_probs=631.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEE------CCeE
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFR 75 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r------~g~~ 75 (845)
+.++|++++++|++.+ .|.++..+++.+++..+++.+++++.++..+++++. .+.+++|+| ||++
T Consensus 71 ~~~iL~~~a~ls~~~~--------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l-~~~~~~V~R~~~~~~dg~~ 141 (867)
T TIGR01524 71 FIYILAMLMGVSYLTD--------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNM-VKNTATVLRVINENGNGSM 141 (867)
T ss_pred HHHHHHHHHHHHHHHh--------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhh-ccCeeEEEEecccCCCCeE
Confidence 4678999999999987 688998888888888888888999888888888764 456899999 9999
Q ss_pred EEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC------------CeEEeccEEEeceE
Q 003127 76 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSC 143 (845)
Q Consensus 76 ~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~------------~~v~~Gt~v~~g~~ 143 (845)
++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ +++|+||.+.+|++
T Consensus 142 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~ 221 (867)
T TIGR01524 142 DEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHA 221 (867)
T ss_pred EEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEE
Confidence 999999999999999999999999999999988999999999999999997543 57999999999999
Q ss_pred EEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHH
Q 003127 144 KMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 223 (845)
Q Consensus 144 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (845)
+++|++||.+|++||+.+.+.+ ..+++|+|+.++++++++..++++++.++++++.. . .+ +
T Consensus 222 ~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~ 282 (867)
T TIGR01524 222 QAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------D 282 (867)
T ss_pred EEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------C
Confidence 9999999999999999999988 55679999999999999988877766665544221 0 01 3
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCe
Q 003127 224 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 303 (845)
Q Consensus 224 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~ 303 (845)
+...+..++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 283 ~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~ 362 (867)
T TIGR01524 283 WLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG 362 (867)
T ss_pred HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999988642110
Q ss_pred eEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 304 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
. ...+.+..+ ++|+... ...+||.|.|+++++.+.. ....+..++.++.+
T Consensus 363 ~------------------~~~~~l~~a-~l~~~~~---------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 363 E------------------TSERVLKMA-WLNSYFQ---------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEI 412 (867)
T ss_pred C------------------CHHHHHHHH-HHhCCCC---------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEe
Confidence 0 012222222 2232210 1157999999999987542 22334567888999
Q ss_pred cCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 384 PFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
||+|+||+|+++++.+++.+++++||+||.++++|+.+. .++...+++++.++++.+..++++++|+|++++|||+++.
T Consensus 413 pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~ 491 (867)
T TIGR01524 413 PFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKV 491 (867)
T ss_pred ccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCc
Confidence 999999999999987666688999999999999998764 4667778998888899999999999999999999998876
Q ss_pred CCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 464 EFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 464 ~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
+........|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+.. ..+++|.+++.++
T Consensus 492 ~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~ 569 (867)
T TIGR01524 492 GEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELS 569 (867)
T ss_pred ccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCC
Confidence 43211122478899999999999999999999999999999999999999999999999999964 3689999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++||+||||| +|+|.||++||+++.+|++
T Consensus 570 ~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 570 DEELARELRKYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSL 647 (867)
T ss_pred HHHHHHHhhhCeEEEECCHHHHHHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCCh
Confidence 99999999999999999999999999999998 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRS 703 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~ 703 (845)
..+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|+++.|++|+|+++| +|+++++.|+|++++|++|
T Consensus 648 ~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p 726 (867)
T TIGR01524 648 MVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKP 726 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCC
Confidence 999999999999999999999999999999888887777776668999999999999999 7999999999999999765
Q ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhcccccccccccccccC
Q 003127 704 PVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKG 783 (845)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~ 783 (845)
|+ ++++.+.+. +...+++.+++.+..++.....+...+.......+|..|.+++++|+++.+++|+. +.++|
T Consensus 727 ~~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~-~~~~~-- 798 (867)
T TIGR01524 727 HQ-WEQKGMGRF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE-KIPFI-- 798 (867)
T ss_pred CC-CChhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC-CCCcC--
Confidence 55 666443333 33344433322211111100001101111112347888999999999999999953 33444
Q ss_pred CchhHHHHHHHHHHHHHHH--HHHHH--hhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 784 ILKNYVFVAVLTCTVLFQI--IIIEL--LGTFANTTPLN--LQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 784 ~~~n~~~~~~~~~~~~~~~--~~v~~--~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|+.++.+++.++++++ +++|+ ++.+|++.|+| +..|+++++++++ ++.|+.|.+.
T Consensus 799 --~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 799 --QSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 57777777777766654 44565 48899999884 5567777666664 6788888653
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-116 Score=957.67 Aligned_cols=818 Identities=31% Similarity=0.430 Sum_probs=699.2
Q ss_pred HHHHHHHHHHHHHhhccc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCCeeEEEECCeEEEEe
Q 003127 4 MILAVCALVSLVVGIATE-GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKIS 79 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~-~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~V~r~g~~~~i~ 79 (845)
++++++|+++++.+..+. .....-.+.....+.+..+++++....|.|+.+..+..+ ...+..++|+|||+.+.+.
T Consensus 98 ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~ 177 (1019)
T KOG0203|consen 98 ILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTIN 177 (1019)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEec
Confidence 678899999988766441 111122233333333445555666666666655555443 3557889999999999999
Q ss_pred cCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC---------CCCeEEeccEEEeceEEEEEEEE
Q 003127 80 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 80 ~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~---------~~~~v~~Gt~v~~g~~~~~V~~t 150 (845)
.+|||+||+|.++.||+||||.+++++.+|++|+|+|||||+|.++.+ ..|+-|.+|.+++|.++++|++|
T Consensus 178 ~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~t 257 (1019)
T KOG0203|consen 178 AEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIAT 257 (1019)
T ss_pred hhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEec
Confidence 999999999999999999999999999999999999999999998752 35678999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|.+|+++.+....+..++|+++.++++.+++...++..++..|++.+.. ++ .+...+.+
T Consensus 258 Gd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~ 319 (1019)
T KOG0203|consen 258 GDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVF 319 (1019)
T ss_pred CCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhh
Confidence 9999999999998888888999999999999999888888777777553321 11 46777777
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
.++++++.+|+||+..++.++....++|+++++++||+++.|+||+.++||+|||||||+|.|+|.++|.++.....+..
T Consensus 320 ~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~ 399 (1019)
T KOG0203|consen 320 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT 399 (1019)
T ss_pred hheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCC
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFN 386 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~ 386 (845)
...........+.....+..+..+|+.+.....+.+ +....|++.|.||++++...-.+....++.++.+...||+
T Consensus 400 ~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfN 479 (1019)
T KOG0203|consen 400 EDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFN 479 (1019)
T ss_pred hhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcc
Confidence 333332333335667778888999999888766554 3345899999999999988877778888999999999999
Q ss_pred CCCceEEEEEEcCC---CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 387 SVKKQMGVVIELPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 387 s~~k~~sviv~~~~---~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
|.+|+.-.+.+..+ .++.+.+|||||.++++|+.+.. +|+..|++++.++.+++...++...|.||++||++.+++
T Consensus 480 St~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~ 558 (1019)
T KOG0203|consen 480 STNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPD 558 (1019)
T ss_pred cccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcch
Confidence 99999999998654 47888999999999999998764 788889999999999999999999999999999999986
Q ss_pred CC--------CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc----
Q 003127 464 EF--------SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 531 (845)
Q Consensus 464 ~~--------~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~---- 531 (845)
+. .+..+....|+.|+|++++-||+|..+++++.+||.+||+++|+|||++.||+++|++.||...+.
T Consensus 559 ~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 559 EKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE 638 (1019)
T ss_pred hcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh
Confidence 51 223355677899999999999999999999999999999999999999999999999999765322
Q ss_pred --------------------eeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccC
Q 003127 532 --------------------IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND 589 (845)
Q Consensus 532 --------------------~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND 589 (845)
.+++|.++.+++.+++++++.+. .||||.+|+||..+|+.+|+. |+.|+++|||.||
T Consensus 639 ~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVND 717 (1019)
T KOG0203|consen 639 DIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVND 717 (1019)
T ss_pred hhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCC
Confidence 67899999999999999988443 599999999999999999998 9999999999999
Q ss_pred HHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 003127 590 APALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAP 669 (845)
Q Consensus 590 ~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~ 669 (845)
.||||+||+|||||.+|+|.+|++||++++||||.+++..+++||.+|+|+||.+.|.++.|+..+.+.++|.+++.|+|
T Consensus 718 sPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLp 797 (1019)
T KOG0203|consen 718 SPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLP 797 (1019)
T ss_pred ChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCC-CCCCCcCHHHHHH-HHHHHHHHHHHHHHHHHhcc--ccc---
Q 003127 670 LTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVG-RKGNFISNVMWRN-ILGQSLYQFLIIWYLQTRGK--AVF--- 742 (845)
Q Consensus 670 l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~--- 742 (845)
+.++++|.+++.+|+.|+++|++|+|+.|+|+|+|++ ++++++|.+++.. ....+.+|++..|+-||... ..|
T Consensus 798 lgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~ 877 (1019)
T KOG0203|consen 798 LGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPR 877 (1019)
T ss_pred cchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 9999999999999999999999999999999999997 7789999887644 34447888877776554211 111
Q ss_pred ---cCC---------------CC--------CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHHHH
Q 003127 743 ---RLD---------------GP--------DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTC 796 (845)
Q Consensus 743 ---~~~---------------~~--------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~ 796 (845)
+++ |. ......+|..|.+++++|++++++|+ +++-++|++-++||+++++++.
T Consensus 878 ~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~K-TRRnSlfqqGmrN~vl~f~v~~ 956 (1019)
T KOG0203|consen 878 TLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICK-TRRNSIFQQGMRNKVLIFAVIF 956 (1019)
T ss_pred HHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhh-cchhHHHHhhhhhhhHHHHHHH
Confidence 100 10 01125688999999999999999999 6788899877999999999998
Q ss_pred HHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 797 TVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 797 ~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
..++.+ .++|.....+++.|++|.||+..++++++.|+++|+.|++
T Consensus 957 e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 957 ETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred HHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHh
Confidence 877743 3457788999999999999999999999999999999965
No 13
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.2e-106 Score=953.96 Aligned_cols=703 Identities=23% Similarity=0.359 Sum_probs=582.1
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
+.++|++++++|+++| .|.++..+++.+++...++.+++++.++..+++.+. .+.+++|+|||++++|+++
T Consensus 38 ~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~ 108 (755)
T TIGR01647 38 LSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPAS 108 (755)
T ss_pred HHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhh
Confidence 4578999999999998 688988888888888888888888888888888754 4678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHH
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 161 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 161 (845)
||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ +.+|+||.+.+|+++++|++||.+|++||+.+
T Consensus 109 ~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 109 ELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred hCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHH
Confidence 99999999999999999999999998789999999999999999764 56999999999999999999999999999999
Q ss_pred hhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCC
Q 003127 162 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241 (845)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~ 241 (845)
.+.+.+.+++|+|+.++++++++.++++++++++++++... . +. ++...+.+++++++++|||
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~--~-----~~----------~~~~~~~~~i~vlv~a~P~ 250 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG--R-----GE----------SFREGLQFALVLLVGGIPI 250 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c-----CC----------CHHHHHHHHHHHHHHhCCc
Confidence 99988888899999999999999888777776666543220 0 11 3567788899999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCC
Q 003127 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIP 321 (845)
Q Consensus 242 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (845)
+||++++++++.+.++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.+ .
T Consensus 251 ~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------~ 315 (755)
T TIGR01647 251 AMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF---------------D 315 (755)
T ss_pred chHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------------C
Confidence 9999999999999999999999999999999999999999999999999999999987643210 0
Q ss_pred hhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCC-
Q 003127 322 ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 400 (845)
Q Consensus 322 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~- 400 (845)
..+.+..+.++|. ...+||.|.|+++++.+.+ ..+..+++++.+||++.+|+|+++++.++
T Consensus 316 --~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~ 377 (755)
T TIGR01647 316 --KDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPET 377 (755)
T ss_pred --HHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCC
Confidence 1123333332221 1157999999999887543 23345788899999999999999998654
Q ss_pred CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEE
Q 003127 401 GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480 (845)
Q Consensus 401 ~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG 480 (845)
++.+.++||+||.+++.|+.. ++.++++++..++++++|+|++++|||+ .|++++|+|
T Consensus 378 g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~G 435 (755)
T TIGR01647 378 GKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD-----------EEGRWHFLG 435 (755)
T ss_pred ceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEE
Confidence 667788999999999999741 2345678888999999999999999972 256899999
Q ss_pred EeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
+++++||+||+++++|++||++|++++|+|||++.+|.++|+++|+..+ ...+.+|++.+.++++++.+.+.+..+|
T Consensus 436 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred EeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 9999999999999999999999999999999999999999999999753 1234455556678888899999999999
Q ss_pred EEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHH
Q 003127 558 ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 637 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~ 637 (845)
+|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++|||||||| +|+|.||++||+++.+|++..+.+++++||++|
T Consensus 516 Ar~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~ 593 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIF 593 (755)
T ss_pred EecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHH
Confidence 999999999999999998 999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHH
Q 003127 638 INIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMW 717 (845)
Q Consensus 638 ~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 717 (845)
+|+++++.|.++.|+..+++.++..++.+ .|++|+|++|+|+++|. |++++++|++++. ++|+.+. ++ .++
T Consensus 594 ~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~~---~~-~~~ 664 (755)
T TIGR01647 594 QRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRWN---LR-EVF 664 (755)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCccc---hH-HHH
Confidence 99999999999999998877666555444 45999999999999996 6999999998753 4554443 33 555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc---cccCCCC-CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHH
Q 003127 718 RNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAV 793 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 793 (845)
..++..|++.++..+.+++.... ++...+. ......+|++|.+++++|+++++++|+ ++. +|+. .+++++..+
T Consensus 665 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~-~~~-~~~~-~p~~~l~~~ 741 (755)
T TIGR01647 665 TMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT-HGF-FWSE-RPGKLLFIA 741 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc-CCC-Cccc-CCcHHHHHH
Confidence 55555666666544433322111 1111111 112357899999999999999999994 343 4443 366666666
Q ss_pred HHHHHHH
Q 003127 794 LTCTVLF 800 (845)
Q Consensus 794 ~~~~~~~ 800 (845)
.++..++
T Consensus 742 ~~~~~~~ 748 (755)
T TIGR01647 742 FVIAQII 748 (755)
T ss_pred HHHHHHH
Confidence 6655555
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=7.5e-106 Score=984.29 Aligned_cols=740 Identities=23% Similarity=0.307 Sum_probs=583.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEc--CCCeeeccEEE
Q 003127 26 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLF 103 (845)
Q Consensus 26 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~--~G~~iPaD~~l 103 (845)
.|.+++.+++.+++...++..++.+..++++++. .++..++|+|||++++|+++||+|||+|.++ +|++|||||+|
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~l 269 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVL 269 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEE
Confidence 4788877776666665555555554444444432 2456899999999999999999999999999 99999999999
Q ss_pred EeeCceeEecccCCCCCCcccccCC-----------------CCeEEeccEEEe-------ceEEEEEEEEeecchhhHH
Q 003127 104 VSGFSVLINESSLTGESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKL 159 (845)
Q Consensus 104 l~~~~~~Vdes~LtGEs~p~~k~~~-----------------~~~v~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i 159 (845)
++|+ |.||||+|||||.|+.|.+. ++++|+||.+.+ |.+.++|++||.+|..|++
T Consensus 270 l~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 270 LSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred EeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHH
Confidence 9995 89999999999999999631 347999999995 7899999999999999999
Q ss_pred HHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhc
Q 003127 160 MATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239 (845)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 239 (845)
.+.+..+++..+++++...++...+..++++. +++++..... .+. ++...+..+++++++++
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~----~i~~~~~~~~----~~~----------~~~~~~l~~l~iiv~~v 410 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIG----FIYTIIELIK----DGR----------PLGKIILRSLDIITIVV 410 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----cCC----------cHHHHHHHHHHHHHhhc
Confidence 99998888888999988877765554433222 2211111111 111 45677888999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCC
Q 003127 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 319 (845)
Q Consensus 240 P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 319 (845)
|++||++++++++.++.+|+|+|++||+++++|.+|++|++|||||||||+|+|+|.+++..+.....+... ..
T Consensus 411 P~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~-----~~- 484 (1054)
T TIGR01657 411 PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV-----TE- 484 (1054)
T ss_pred CchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc-----cc-
Confidence 999999999999999999999999999999999999999999999999999999999998654321110000 00
Q ss_pred CChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCC-----hHH----------hhhhcceEEEec
Q 003127 320 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD-----FQA----------ERQASKIVKVEP 384 (845)
Q Consensus 320 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~-----~~~----------~~~~~~~l~~~~ 384 (845)
........+..++..||+..... + ...|||+|.|+++++...... ... ....+++++.+|
T Consensus 485 ~~~~~~~~~~~~~a~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~p 559 (1054)
T TIGR01657 485 DSSLKPSITHKALATCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQ 559 (1054)
T ss_pred ccccCchHHHHHHHhCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEe
Confidence 00011223445667888765432 1 468999999999986321100 000 024678899999
Q ss_pred CCCCCceEEEEEEcCC-CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 385 FNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 385 F~s~~k~~sviv~~~~-~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
|+|++||||++++.++ +++++++|||||.|+++|+.. ..++.+.+..++|+++|+||+++|||++++
T Consensus 560 F~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 560 FSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred ecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 9999999999999754 567899999999999999741 113567888999999999999999999874
Q ss_pred CC-----CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc-------
Q 003127 464 EF-----SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------- 531 (845)
Q Consensus 464 ~~-----~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~------- 531 (845)
.. +..++.+|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++|+..++.
T Consensus 628 ~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~ 707 (1054)
T TIGR01657 628 LTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEA 707 (1054)
T ss_pred cchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeec
Confidence 31 123456789999999999999999999999999999999999999999999999999999975432
Q ss_pred ----------------------------------------------eeeeCccccc---CCHHHHhhhcCCeeEEEEeCh
Q 003127 532 ----------------------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 532 ----------------------------------------------~~i~g~~~~~---~~~~~~~~~~~~~~v~~~~~p 562 (845)
.+++|+++.. +.++++.+.+.+..||||++|
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP 787 (1054)
T TIGR01657 708 EPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAP 787 (1054)
T ss_pred ccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCH
Confidence 3555555543 344667788889999999999
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
+||.++|+.+|+. |+.|+|+|||+||+||||+|||||||| ++ | |..+||+++.+++++++.+++++||+++.|+++
T Consensus 788 ~qK~~iV~~lq~~-g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~ 863 (1054)
T TIGR01657 788 DQKETLVELLQKL-DYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQ 863 (1054)
T ss_pred HHHHHHHHHHHhC-CCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 999999999999999999999999999 43 3 558999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILG 722 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 722 (845)
+++|.+.+++...+...+ ++..+.|++++|++|+|++++.+|+++++.++|.+++|+++| .++++++.++.++++
T Consensus 864 ~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~ 938 (1054)
T TIGR01657 864 MFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLI 938 (1054)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHH
Confidence 999999999887555432 233458999999999999999999999999999999999999 468999999999999
Q ss_pred HHHHHHHHHHHHHHhcc--cccc------CCCCCccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHH
Q 003127 723 QSLYQFLIIWYLQTRGK--AVFR------LDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVL 794 (845)
Q Consensus 723 ~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~ 794 (845)
+++++.++.++.++... .++. .+.........|++| .++.+|.+..+.+++. ..++.+++++|++++.++
T Consensus 939 q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~ 1016 (1054)
T TIGR01657 939 QFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLL 1016 (1054)
T ss_pred HHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHH
Confidence 99998887766554322 1110 001112224468888 4555566666777743 445556888999998888
Q ss_pred HHHHHHHHH----HHHHhhhcccccCCChH
Q 003127 795 TCTVLFQII----IIELLGTFANTTPLNLQ 820 (845)
Q Consensus 795 ~~~~~~~~~----~v~~~~~~f~~~~l~~~ 820 (845)
++.+++++. ++|+++.+|+++|++..
T Consensus 1017 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1017 ITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred HHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 777665431 35788999999999853
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.5e-104 Score=974.29 Aligned_cols=802 Identities=23% Similarity=0.314 Sum_probs=618.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEC-CeEEEEecC
Q 003127 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIY 81 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~~~~i~~~ 81 (845)
-+++++.+++++++.+.+ .++.+.++|+++++.+++++++.+++++++.++..++.+++|+|| |++++++|+
T Consensus 30 N~yfl~i~ilq~ip~~s~-------~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~ 102 (1057)
T TIGR01652 30 NLYFLVVALLQQVPILSP-------TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK 102 (1057)
T ss_pred hHHHHHHHHHHcCCCcCC-------CCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeee
Confidence 367889999999987632 345667889999999999999999999999999999999999997 899999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCcccccC------------------------------
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA------------------------------ 127 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~~------------------------------ 127 (845)
||+|||+|.+++||+||||++++++++ |+||||+|||||+|+.|..
T Consensus 103 ~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~ 182 (1057)
T TIGR01652 103 DLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLY 182 (1057)
T ss_pred cccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcce
Confidence 999999999999999999999999765 9999999999999998842
Q ss_pred -----------------CCCeEEeccEEEe-ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHH
Q 003127 128 -----------------LNPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 189 (845)
Q Consensus 128 -----------------~~~~v~~Gt~v~~-g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 189 (845)
.+|++++||.+.+ |++.|+|++||++|++ .++...++.++++++++++++..++..+.+
T Consensus 183 ~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~~n~~~~~~k~s~le~~ln~~~~~l~~~~i 259 (1057)
T TIGR01652 183 SFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---MRNATQAPSKRSRLEKELNFLIIILFCLLF 259 (1057)
T ss_pred EEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---hhcCCCCcccccHHHHHHhhHHHHHHHHHH
Confidence 1256899999999 9999999999999965 445666777889999999999888777666
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccccC-----CCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH------HHH
Q 003127 190 FFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM------KKM 258 (845)
Q Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~------~~l 258 (845)
+++++++++. .++........|+.. .+....+...+..++.++..++|++|++.++++...++ .+|
T Consensus 260 ~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m 336 (1057)
T TIGR01652 260 VLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQM 336 (1057)
T ss_pred HHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhh
Confidence 6665554432 111110001011110 01122344466778888999999999999999999988 778
Q ss_pred hcC----CceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCC-------CCC-----C----CC-
Q 003127 259 MND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK-------GTP-----A----FG- 317 (845)
Q Consensus 259 ~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~-------~~~-----~----~~- 317 (845)
.++ ++.+|+++++|+||++++||+|||||||+|+|+++++++++..|..+... ... . ..
T Consensus 337 ~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1057)
T TIGR01652 337 YHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVES 416 (1057)
T ss_pred hccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccc
Confidence 764 59999999999999999999999999999999999999998877522110 000 0 00
Q ss_pred ----------------CCCChhHHHHHHHHHHhcCCceEEecCCC---ceEEcCCchHHHHHHHHHHcCCChHH------
Q 003127 318 ----------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTEILGTPTETAILEFGLLLGGDFQA------ 372 (845)
Q Consensus 318 ----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~p~e~al~~~~~~~~~~~~~------ 372 (845)
.....+....+..++.+||++....++++ ..+..+||+|.|++++|+..|+.+..
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~ 496 (1057)
T TIGR01652 417 KGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSI 496 (1057)
T ss_pred cccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCce
Confidence 00001123345667888998776642222 23447999999999999999876542
Q ss_pred --------hhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHH
Q 003127 373 --------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIE 444 (845)
Q Consensus 373 --------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (845)
....+++++.+||+|+|||||++++.+++++++++||||+.|+++|++ .+++.++++.+.++
T Consensus 497 ~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~----------~~~~~~~~~~~~~~ 566 (1057)
T TIGR01652 497 SLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSS----------GGNQVNEETKEHLE 566 (1057)
T ss_pred EEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhc----------cchhHHHHHHHHHH
Confidence 224688999999999999999999988888999999999999999974 12345677889999
Q ss_pred HHHHhhchhhhheeeecCCCCC---------------C-------CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHc
Q 003127 445 KFASEALRTLCLACMEIGNEFS---------------A-------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 502 (845)
Q Consensus 445 ~~~~~G~r~l~~a~~~i~~~~~---------------~-------~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~ 502 (845)
+|+++|+||+++|||.+++++- . ..+.+|+|++|+|+++++||+|++++++|++|+++
T Consensus 567 ~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~A 646 (1057)
T TIGR01652 567 NYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQA 646 (1057)
T ss_pred HHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHC
Confidence 9999999999999999976410 0 01347899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------------------eeeeCccccc
Q 003127 503 GITVRMVTGDNINTAKAIARECGILTDNG-----------------------------------------IAIEGPEFRE 541 (845)
Q Consensus 503 Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~-----------------------------------------~~i~g~~~~~ 541 (845)
||++||+|||+.+||.++|+++|+..++. .+++|+++..
T Consensus 647 GIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 726 (1057)
T TIGR01652 647 GIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGY 726 (1057)
T ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHH
Confidence 99999999999999999999999986542 2566666553
Q ss_pred CCHH----HHhhhcC--CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH--HHHhc
Q 003127 542 KSDE----ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKES 613 (845)
Q Consensus 542 ~~~~----~~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~--~ak~~ 613 (845)
+.++ ++.+++. +..|+||++|+||+++|+.+|+..|+.|+|+|||.||++||++|||||++ .|+| .|+.+
T Consensus 727 ~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~a 804 (1057)
T TIGR01652 727 ALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMA 804 (1057)
T ss_pred HHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHh
Confidence 3322 2333443 44599999999999999999987689999999999999999999999965 4666 48999
Q ss_pred cCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CChhhHHHHHHHHHHHHHhhhh
Q 003127 614 ADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN---APLTAVQLLWVNMIMDTLGALA 689 (845)
Q Consensus 614 ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~p~~~ 689 (845)
||+++.+ |..+.+++ .|||++|+|+++++.|.+++|++.+++++++.+++++ +++++++++|+|+++|.+|+++
T Consensus 805 aD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~ 882 (1057)
T TIGR01652 805 SDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVIS 882 (1057)
T ss_pred hhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999986 99999987 8999999999999999999999999999999887654 5789999999999999999999
Q ss_pred hcc--CCCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcc---ccccCCCCC-ccchhhhHHHH
Q 003127 690 LAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK---AVFRLDGPD-PDLILNTLIFN 759 (845)
Q Consensus 690 l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~t~~f~ 759 (845)
+|. +++++++|.++|+ .+++++++++.+..|++.+++|+++++++.+... ... .+|.. ......+..|.
T Consensus 883 l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~ 961 (1057)
T TIGR01652 883 LGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGSLDDFSSVGVIVFT 961 (1057)
T ss_pred HHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCcccchhhHHHHHHH
Confidence 975 6777889999997 5677888988888899999999998876643221 111 13331 12344566666
Q ss_pred HHHHHHHhcccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhhcc---------cccCCChHHHHHHHHHHH
Q 003127 760 TFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFA---------NTTPLNLQQWFVSILLGF 830 (845)
Q Consensus 760 ~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f---------~~~~l~~~~w~~~~~~~~ 830 (845)
++++...+.+...- . .| +++.++++++++++.+++....+..+ ...--++.+|+.++++.+
T Consensus 962 ~~~~~~~~~~~~~~--~---~w-----t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~ 1031 (1057)
T TIGR01652 962 ALVVIVNLKIALEI--N---RW-----NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVL 1031 (1057)
T ss_pred HHHHHHHHHHHHHH--h---Hh-----HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHH
Confidence 66665544332211 1 11 12333444444444333222222111 111235889999999999
Q ss_pred HHHHHHHHHhhc
Q 003127 831 LGMPIAAVLKLI 842 (845)
Q Consensus 831 ~~~~~~~i~K~~ 842 (845)
+.++++.++|.+
T Consensus 1032 ~~l~p~~~~~~~ 1043 (1057)
T TIGR01652 1032 ISLLPRFTYKAI 1043 (1057)
T ss_pred HHHHHHHHHHHH
Confidence 999888888865
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.1e-100 Score=927.20 Aligned_cols=799 Identities=20% Similarity=0.279 Sum_probs=596.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCc
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDL 83 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l 83 (845)
+.+++.+++.+++.+. +..+.+.++||++++++++++++.+++++++.++..|+++++|+|+|++++++|++|
T Consensus 117 ~YFL~I~ilq~ip~~s-------~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i 189 (1178)
T PLN03190 117 IYFLVIAVLNQLPQLA-------VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189 (1178)
T ss_pred HHHHHHHHHHhCCCcc-------cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHC
Confidence 4677888888887653 333566788999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCcccccC--------------------------------
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA-------------------------------- 127 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~~-------------------------------- 127 (845)
+|||+|++++||++|||++++++++ |+||||+|||||+|+.|..
T Consensus 190 ~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G 269 (1178)
T PLN03190 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQA 269 (1178)
T ss_pred CCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEE
Confidence 9999999999999999999999654 8999999999999998831
Q ss_pred ------------CCCeEEeccEEEec-eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 003127 128 ------------LNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVV 194 (845)
Q Consensus 128 ------------~~~~v~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 194 (845)
.+|++++||.+.+. .++|+|++||++| |++.+...++.|.+++++++|++...+..+.+++|++
T Consensus 270 ~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i 346 (1178)
T PLN03190 270 NMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTI 346 (1178)
T ss_pred EEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHH
Confidence 13467888888875 6999999999999 5777777777889999999999988877776666665
Q ss_pred HHHHHHHHHHHhhcc-CCCccccCCC---------C--h----HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 003127 195 TFAVMVQGLFTRKLQ-EGTHWTWSGD---------D--A----LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 258 (845)
Q Consensus 195 ~~~~~~~~~~~~~~~-~~~~~~~~~~---------~--~----~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l 258 (845)
+.++.. .+..... ...+..|+.. . . ...+..|...+.++...+|.+|++.+.+........+
T Consensus 347 ~~i~~~--~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I 424 (1178)
T PLN03190 347 VSVCAA--VWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFM 424 (1178)
T ss_pred HHHHHH--hhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHH
Confidence 544321 1111100 0001111110 0 0 1112233344556668899999999999997756555
Q ss_pred hcC----------CceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCC-------------C---
Q 003127 259 MND----------KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK-------------G--- 312 (845)
Q Consensus 259 ~~~----------~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~-------------~--- 312 (845)
.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++++++..|+.+... .
T Consensus 425 ~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~ 504 (1178)
T PLN03190 425 IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKIL 504 (1178)
T ss_pred HhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccc
Confidence 443 37899999999999999999999999999999999999988776421100 0
Q ss_pred CCCCCC------------CCC---hhHHHHHHHHHHhcCCceEEecCC--C-----ceEEcCCchHHHHHHHHHHcCCC-
Q 003127 313 TPAFGS------------SIP---ASASKLLLQSIFNNTGGEVVIGEG--N-----KTEILGTPTETAILEFGLLLGGD- 369 (845)
Q Consensus 313 ~~~~~~------------~~~---~~~~~~l~~~~~~~~~~~~~~~~~--~-----~~~~~~~p~e~al~~~~~~~~~~- 369 (845)
.+.... ... ......+..++.+||++.....++ + ..+..+||+|.||+++|++.|+.
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l 584 (1178)
T PLN03190 505 RPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFML 584 (1178)
T ss_pred cccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeE
Confidence 000000 000 011234667788899887642111 1 12456799999999999999973
Q ss_pred -----------hHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHH
Q 003127 370 -----------FQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNH 438 (845)
Q Consensus 370 -----------~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~ 438 (845)
....+..+++++.+||+|+|||||++++.+++++.+|+||||+.|+++|++.. +++.++.
T Consensus 585 ~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~ 655 (1178)
T PLN03190 585 IERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRA 655 (1178)
T ss_pred ecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHH
Confidence 33445689999999999999999999998888899999999999999997532 2234567
Q ss_pred HHHHHHHHHHhhchhhhheeeecCCCCC----------------------CCCCCCCCceEEEEEeeecCCCChhHHHHH
Q 003127 439 LNETIEKFASEALRTLCLACMEIGNEFS----------------------ADAPIPTEGYTCIGIVGIKDPMRPGVKESV 496 (845)
Q Consensus 439 ~~~~~~~~~~~G~r~l~~a~~~i~~~~~----------------------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I 496 (845)
+.+.+++|+++|+|||++|||+++++.- ...+.+|+|++++|+++++|++|++++++|
T Consensus 656 ~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I 735 (1178)
T PLN03190 656 TEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAI 735 (1178)
T ss_pred HHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHH
Confidence 8889999999999999999999975310 011457899999999999999999999999
Q ss_pred HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------------------------------
Q 003127 497 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------------------------------- 531 (845)
Q Consensus 497 ~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--------------------------------------------- 531 (845)
++|+++|+++||+|||+.+||.++|+++|+.+++.
T Consensus 736 ~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1178)
T PLN03190 736 ESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAAS 815 (1178)
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccC
Confidence 99999999999999999999999999999975542
Q ss_pred ----eeeeCcccccCCH----HHHhhhcC--CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 532 ----IAIEGPEFREKSD----EELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 532 ----~~i~g~~~~~~~~----~~~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.+++|..+..+.+ +.+.++.. +..++||++|.||+++|+.+|+..++.|+|+|||+||++||++|||||
T Consensus 816 ~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI- 894 (1178)
T PLN03190 816 DPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV- 894 (1178)
T ss_pred CceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee-
Confidence 3445554444332 23444443 445899999999999999999874589999999999999999999999
Q ss_pred eCCCCcH--HHHhccCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---ChhhHHH
Q 003127 602 MGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNA---PLTAVQL 675 (845)
Q Consensus 602 mg~~~~~--~ak~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~---~l~~~~~ 675 (845)
|..|+| .|+.+||+++.+ |..+.++| .|||++|.|+.+.+.|.+|+|+++.+++++|.++++++ .++++.+
T Consensus 895 -GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~ 971 (1178)
T PLN03190 895 -GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSS 971 (1178)
T ss_pred -eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 667888 589999999987 99999985 79999999999999999999999999999999988775 4578899
Q ss_pred HHHHHHHHHHhhhhhcc--CCCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCc
Q 003127 676 LWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDP 749 (845)
Q Consensus 676 l~~~~~~~~~p~~~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (845)
.+||+++|++|+++++. ++..++.+.+.|. .++...++.+.|..|++.|++|++++|++.+........++.
T Consensus 972 ~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~-- 1049 (1178)
T PLN03190 972 VLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGS-- 1049 (1178)
T ss_pred HHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCce--
Confidence 99999999999999874 4444555666673 345678888888889999999999888765432111111211
Q ss_pred cchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHHHHHHHHHHHHH------HHhh---hcccccCCChH
Q 003127 750 DLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIII------ELLG---TFANTTPLNLQ 820 (845)
Q Consensus 750 ~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v------~~~~---~~f~~~~l~~~ 820 (845)
...++.+.+.++...+.+.. . ++. | +++-++++++++++.+++. +... .++. .--++.
T Consensus 1050 --~~~~~~~~~~v~~vnl~i~~-~-~~~---w-----t~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~ 1116 (1178)
T PLN03190 1050 --SIGDLWTLAVVILVNLHLAM-D-IIR---W-----NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFH-IAKTGS 1116 (1178)
T ss_pred --eEhHhhhhHHHHHHHHHHHH-H-Hhh---h-----hHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH-HhccHH
Confidence 12233333333333222211 1 111 1 1211222333333322211 1111 1111 113588
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 003127 821 QWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 821 ~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
+|+.++++.++.++++.++|++
T Consensus 1117 fwl~ill~~~~~l~p~~~~~~~ 1138 (1178)
T PLN03190 1117 FWLCLLAIVVAALLPRFVVKVL 1138 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888865
No 17
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=6.9e-92 Score=821.02 Aligned_cols=803 Identities=23% Similarity=0.310 Sum_probs=603.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCe-EEEEecCC
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF-RRKISIYD 82 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~-~~~i~~~~ 82 (845)
+.+++.+++++++ +. ...+.+.++|+++++.+++++|..+|+++++.|++.|+.++.|.|++. +++..|++
T Consensus 62 ~yFl~~~il~~ip-~~-------~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~ 133 (1151)
T KOG0206|consen 62 LYFLFIAILQFIP-LS-------PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKD 133 (1151)
T ss_pred HHHHHHHHHHcCc-cc-------ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccce
Confidence 4678888999887 43 233445678999999999999999999999999999999999999644 89999999
Q ss_pred cCCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCccccc--------------------------------
Q 003127 83 LLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVN-------------------------------- 126 (845)
Q Consensus 83 l~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~-------------------------------- 126 (845)
+++||+|.+..+|.+|||.+++++++ |+|++++|+||++.+.|.
T Consensus 134 ~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~ 213 (1151)
T KOG0206|consen 134 VRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYT 213 (1151)
T ss_pred eeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhh
Confidence 99999999999999999999999875 999999999999998771
Q ss_pred --------------CCCCeEEeccEEEec-eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003127 127 --------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 191 (845)
Q Consensus 127 --------------~~~~~v~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 191 (845)
..++++++|+++.+. .+.|.|+.||++| |++++...++.|++++++.+|.....+..+.+..
T Consensus 214 f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~ 290 (1151)
T KOG0206|consen 214 FVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILM 290 (1151)
T ss_pred hhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHH
Confidence 013467899999985 5899999999999 6777777788899999999998876665555444
Q ss_pred HHHHHHHHHHHHHHhhccCCC--ccccCCC-ChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH------HHh---
Q 003127 192 AVVTFAVMVQGLFTRKLQEGT--HWTWSGD-DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK------KMM--- 259 (845)
Q Consensus 192 ~i~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~------~l~--- 259 (845)
+++..+. ............ .++...+ ........|..++.++...+|.+|...+.+.....+. .|.
T Consensus 291 ~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e 368 (1151)
T KOG0206|consen 291 CLISAIG--FAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEE 368 (1151)
T ss_pred HHHHHhh--hheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhcc
Confidence 4443332 122222111111 1111222 1123445566677788889999998877766655442 333
Q ss_pred -cCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC-------C----------------CC
Q 003127 260 -NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG-------T----------------PA 315 (845)
Q Consensus 260 -~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~-------~----------------~~ 315 (845)
+..+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.+..|+....+. . +.
T Consensus 369 ~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 448 (1151)
T KOG0206|consen 369 TDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSR 448 (1151)
T ss_pred CCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccch
Confidence 46788999999999999999999999999999999999999988775332110 0 00
Q ss_pred CC-----CCCChhHHHHHHHHHHhcCCceEEecCC--CceEEcCCchHHHHHHHHHHcCCChHHh------------hhh
Q 003127 316 FG-----SSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTPTETAILEFGLLLGGDFQAE------------RQA 376 (845)
Q Consensus 316 ~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~~~~~~~~------------~~~ 376 (845)
.. .....+....+..++++||+...+.+++ ...+...+|+|.|+++.|+..|+.+..+ .+.
T Consensus 449 ~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~ 528 (1151)
T KOG0206|consen 449 LVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEET 528 (1151)
T ss_pred hhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccccee
Confidence 00 0012233445677888999988777333 2456699999999999999999775432 358
Q ss_pred cceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhh
Q 003127 377 SKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCL 456 (845)
Q Consensus 377 ~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~ 456 (845)
|+++.+.+|+|.|||||||++.+++++.+|||||+.+|++++.. -.+..+++..+++++|+.+|+||||+
T Consensus 529 y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~ 598 (1151)
T KOG0206|consen 529 YELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCL 598 (1151)
T ss_pred EEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhh
Confidence 99999999999999999999999999999999999999999874 12345667778999999999999999
Q ss_pred eeeecCCCC----------------------CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 457 ACMEIGNEF----------------------SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 457 a~~~i~~~~----------------------~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
|||++++++ ++..+.+|+|++++|.+++||+++++++|+|++|++||||+|++|||+.
T Consensus 599 A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ 678 (1151)
T KOG0206|consen 599 AYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQ 678 (1151)
T ss_pred hhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHH
Confidence 999999861 1113578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCccCCc-----------------------------------------------eeeeCcccccCCHH--
Q 003127 515 NTAKAIARECGILTDNG-----------------------------------------------IAIEGPEFREKSDE-- 545 (845)
Q Consensus 515 ~ta~~ia~~lgi~~~~~-----------------------------------------------~~i~g~~~~~~~~~-- 545 (845)
+||.+++.+|++..++. ++++|+.+....+.
T Consensus 679 ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~ 758 (1151)
T KOG0206|consen 679 ETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDEL 758 (1151)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchh
Confidence 99999999999987643 23333333222111
Q ss_pred --HHhhhc--CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH--HHhccCEEec
Q 003127 546 --ELSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIIL 619 (845)
Q Consensus 546 --~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~--ak~~ad~v~~ 619 (845)
.+.++. ++..++||++|.||+.+++..++..+..++++|||+||++|++.||+|| |++|.|. |..++|+.+.
T Consensus 759 ~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIa 836 (1151)
T KOG0206|consen 759 RKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIA 836 (1151)
T ss_pred hHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCe--eeccchhhhhhhcccchHH
Confidence 111221 5667999999999999999998777899999999999999999999999 4457775 7889999998
Q ss_pred cCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CChhhHHHHHHHHHHHHHhhhhhcc--C
Q 003127 620 DDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN---APLTAVQLLWVNMIMDTLGALALAT--E 693 (845)
Q Consensus 620 ~~~~~~i~~~-i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~p~~~l~~--~ 693 (845)
. |.-+.++ +.|||+.|.|+.+++.|.+|+|+.+.+.+|+|.+++++ ..+.++++.++|++++++|++.+|. .
T Consensus 837 q--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdq 914 (1151)
T KOG0206|consen 837 Q--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQ 914 (1151)
T ss_pred H--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeeccc
Confidence 8 7778776 58999999999999999999999999999999988765 4678999999999999999999985 5
Q ss_pred CCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccCCCCCc-cchhhhHHHHHHHHHHH
Q 003127 694 PPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGPDP-DLILNTLIFNTFVFCQV 766 (845)
Q Consensus 694 ~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~t~~f~~~v~~q~ 766 (845)
+.+.+.+.+.|. .++...++++.++.|++.++++++++|++.+... .....+|... .....+.+|++.|+.
T Consensus 915 Dvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Viv-- 992 (1151)
T KOG0206|consen 915 DVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIV-- 992 (1151)
T ss_pred CCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEE--
Confidence 566666667774 3455688888888899999999999987644221 1222234322 112233333333222
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhh-ccc------------ccCCChHHHHHHHHHHHHHH
Q 003127 767 FNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGT-FAN------------TTPLNLQQWFVSILLGFLGM 833 (845)
Q Consensus 767 ~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~-~f~------------~~~l~~~~w~~~~~~~~~~~ 833 (845)
.+.+-.-..+.|. +-|+ +.+++++++.+++..+.+. +.. ..--++.+|+.+++.++.++
T Consensus 993 ---v~~~iaL~~~ywT--~i~~---i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~L 1064 (1151)
T KOG0206|consen 993 ---VNLKIALETSYWT--WINH---IVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAAL 1064 (1151)
T ss_pred ---EEeeeeeeehhee--HHHH---HHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 2222111222332 1122 2333333332222222211 111 11135789999999999999
Q ss_pred HHHHHHhhcc
Q 003127 834 PIAAVLKLIQ 843 (845)
Q Consensus 834 ~~~~i~K~~~ 843 (845)
+++.++|.+.
T Consensus 1065 lp~~~~~~l~ 1074 (1151)
T KOG0206|consen 1065 LPDFVYKSLQ 1074 (1151)
T ss_pred hHHHHHHHHH
Confidence 9999988553
No 18
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.4e-86 Score=759.43 Aligned_cols=541 Identities=24% Similarity=0.359 Sum_probs=436.6
Q ss_pred hHHHHHHHHHHHHHHhhccc--CC-CCCchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcCCeeE-EEECC
Q 003127 2 TLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSDY----KQSLQFKDLDREKKKITVQ-VARNG 73 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~--~~-~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~-V~r~g 73 (845)
++++|++++++|++++.+.+ +. ...+.++..+.+.+++.++++.+.|. +.+++.+++.+...+.+++ |.|||
T Consensus 34 ~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg 113 (673)
T PRK14010 34 IMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDG 113 (673)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCC
Confidence 68899999999999997643 11 11235677777777777777777744 4444455555443333565 78999
Q ss_pred eEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC---CCeEEeccEEEeceEEEEEEEE
Q 003127 74 FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 74 ~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~---~~~v~~Gt~v~~g~~~~~V~~t 150 (845)
++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|+.+ ++ +|+||.+.+|+++++|+++
T Consensus 114 ~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~i~Vta~ 191 (673)
T PRK14010 114 SYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-ATVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLEVEITSE 191 (673)
T ss_pred EEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-eEEecchhcCCCCceeccCCCccCe-eecCceeecceEEEEEEEe
Confidence 9999999999999999999999999999999996 59999999999999999876 55 9999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|++||+.+++++++.+++|+|.....+...+.. .++.+++++..+. . + . .+...+..
T Consensus 192 g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~~-~-~--------~-----~~~~~~~~ 251 (673)
T PRK14010 192 PGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPLA-K-F--------L-----NFNLSIAM 251 (673)
T ss_pred cccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHHH-h-h--------c-----cHHHHHHH
Confidence 999999999999999888899999776554332221 1111111111000 0 0 0 12234566
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
.++++++++||+|+..+++..+.++++|+|+|+++|+.+++|+||++|++|||||||||+|++.+.++...+.
T Consensus 252 ~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------- 324 (673)
T PRK14010 252 LIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------- 324 (673)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-------
Confidence 7778888899999999999999999999999999999999999999999999999999998887766542111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCc
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKK 390 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 390 (845)
....+. ......|+.. +.||.++|+++++++.+.+.... ..+..||++++|
T Consensus 325 -----------~~~~~l-l~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~pF~~~~k 375 (673)
T PRK14010 325 -----------SSFERL-VKAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIPFTAETR 375 (673)
T ss_pred -----------ccHHHH-HHHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceeccccccc
Confidence 011222 2333334321 35999999999998876553211 123589999999
Q ss_pred eEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCC
Q 003127 391 QMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 470 (845)
Q Consensus 391 ~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~ 470 (845)
+|++.++ ++ .+.||+++.+++.|++ ++...+ ..+.+..++++++|+|+++++
T Consensus 376 ~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~------------- 427 (673)
T PRK14010 376 MSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVL------------- 427 (673)
T ss_pred eeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEE-------------
Confidence 9998753 22 4559999999999974 222222 125566778999999998765
Q ss_pred CCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 471 ~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
.|++++|+++++|++||+++++|++||++|++++|+|||++.||.++|+++|++.
T Consensus 428 ---~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------- 482 (673)
T PRK14010 428 ---EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------------- 482 (673)
T ss_pred ---ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------------
Confidence 2678999999999999999999999999999999999999999999999999974
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++||+||||| +|+|.||++||+++.+||+..+.+++
T Consensus 483 -----v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 483 -----FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred -----EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 631 KWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 631 ~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
++||++|.|+++++.|.++.|+...+..+.
T Consensus 556 ~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 556 LIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999877665554
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=5.4e-85 Score=747.20 Aligned_cols=548 Identities=25% Similarity=0.361 Sum_probs=436.9
Q ss_pred hHHHHHHHHHHHHHHhhccc---C---CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCe-
Q 003127 2 TLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF- 74 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~---~---~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~- 74 (845)
++++|++++++|+++++++. + +...|...+.+++.+++..++++..+++.+++.+++.+...+.+++|+|||+
T Consensus 35 ~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~ 114 (679)
T PRK01122 35 VMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGA 114 (679)
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCE
Confidence 68899999999999986532 1 1122333333333333334444556666666677776644445799999988
Q ss_pred EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEEee
Q 003127 75 RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTVGM 152 (845)
Q Consensus 75 ~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~tG~ 152 (845)
++++++++|++||+|.+++||+|||||++++|+ ..||||+|||||.|+.|+.+++ .+|+||.+.+|+++++|+++|.
T Consensus 115 ~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~ 193 (679)
T PRK01122 115 AEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPG 193 (679)
T ss_pred EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecc
Confidence 899999999999999999999999999999996 6999999999999999986542 4999999999999999999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|.+||+.+++++.+.+++|+|...+.+...+..+.+++++..+.+ .++. +. .+ .+..++
T Consensus 194 ~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~~-----g~----------~~--~l~~~i 253 (679)
T PRK01122 194 ESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAYS-----GG----------AL--SITVLV 253 (679)
T ss_pred cCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHHh-----Cc----------hH--HHHHHH
Confidence 9999999999999888899999888776655543322222111111 1110 10 11 466788
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
++++++|||+++.+.+.....++.+|.|+|+++|+.+++|+||++|++|||||||||+|+|++.+++..+..
T Consensus 254 allV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-------- 325 (679)
T PRK01122 254 ALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-------- 325 (679)
T ss_pred HHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999987642211
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHH-cCCChHHhhhhcceEEEecCCCCCce
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNSVKKQ 391 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~-~~~~~~~~~~~~~~l~~~~F~s~~k~ 391 (845)
. .+.+......|+.. ..||..+|+++++++ .+... .+..++..+..||++.+++
T Consensus 326 --------~---~~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~~pF~s~~~~ 380 (679)
T PRK01122 326 --------T---EEELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATFVPFSAQTRM 380 (679)
T ss_pred --------C---HHHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCc--hhhccccceeEeecCcCce
Confidence 0 12233333334321 357999999999876 34321 1222456778999999998
Q ss_pred EEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCC
Q 003127 392 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 471 (845)
Q Consensus 392 ~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~ 471 (845)
|++.++ + ..+.||+++.+++.|.+ +|...| +++.+..++++++|.|++++|+
T Consensus 381 ~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~va~------------- 432 (679)
T PRK01122 381 SGVDLD---G--REIRKGAVDAIRRYVES----NGGHFP------AELDAAVDEVARKGGTPLVVAE------------- 432 (679)
T ss_pred EEEEEC---C--EEEEECCHHHHHHHHHh----cCCcCh------HHHHHHHHHHHhCCCcEEEEEE-------------
Confidence 888643 2 47899999999999963 222221 4567788899999999999983
Q ss_pred CCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 472 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 472 ~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
|++++|+++++|++||++++++++||++||+++|+|||++.||.++|+++|++.
T Consensus 433 ---~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------------- 486 (679)
T PRK01122 433 ---DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------------- 486 (679)
T ss_pred ---CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------
Confidence 568999999999999999999999999999999999999999999999999964
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++|||||||| +|+|.||++||+++.+||+..+.++++
T Consensus 487 ----v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 487 ----FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred ----EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHh
Q 003127 632 WGRSVYINIQKFVQFQLTVNV---VALIVNFSSAC 663 (845)
Q Consensus 632 ~gR~~~~~i~~~i~~~l~~n~---~~~~~~~~~~~ 663 (845)
+||+..-.--..-.|++..-+ ..+++.++...
T Consensus 561 ~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~ 595 (679)
T PRK01122 561 IGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAAT 595 (679)
T ss_pred HHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 999998555555677765333 24444444433
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-85 Score=725.54 Aligned_cols=727 Identities=23% Similarity=0.339 Sum_probs=534.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcC-CCeeeccEEEEeeCceeEecccCCCCCC
Q 003127 43 VTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLTGESE 121 (845)
Q Consensus 43 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~-G~~iPaD~~ll~~~~~~Vdes~LtGEs~ 121 (845)
++......++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+|||||.
T Consensus 230 ~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTGESV 306 (1140)
T KOG0208|consen 230 LSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTGESV 306 (1140)
T ss_pred HHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccCCcc
Confidence 333444344444444433 2357999999999999999999999999999 89999999999996 9999999999999
Q ss_pred cccccC------------------CCCeEEeccEEEe------ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHH
Q 003127 122 PVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 177 (845)
Q Consensus 122 p~~k~~------------------~~~~v~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~ 177 (845)
|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..+++....+-+..
T Consensus 307 Pv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds 386 (1140)
T KOG0208|consen 307 PVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDS 386 (1140)
T ss_pred cccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHH
Confidence 999942 2357999999985 5689999999999999999999999876555444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 003127 178 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 257 (845)
Q Consensus 178 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 257 (845)
-++.. +..+++++.++.....+... +. ++...+..++.++.+.+|++||.+++++..++..|
T Consensus 387 ~~fi~----~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~R 448 (1140)
T KOG0208|consen 387 FKFIL----FLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSR 448 (1140)
T ss_pred HHHHH----HHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHH
Confidence 33322 22333333333322222211 11 45567888999999999999999999999999999
Q ss_pred HhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec---C--CCCC-C---CCCCCCChhHHHHH
Q 003127 258 MMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD---N--SKGT-P---AFGSSIPASASKLL 328 (845)
Q Consensus 258 l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~---~--~~~~-~---~~~~~~~~~~~~~l 328 (845)
|.|+||+|-+++.+...|++|++|||||||||++.+.+..+.......... + .... . ....+........+
T Consensus 449 Lkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 528 (1140)
T KOG0208|consen 449 LKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNL 528 (1140)
T ss_pred HHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHH
Confidence 999999999999999999999999999999999999999887643221000 0 0000 0 00001111113356
Q ss_pred HHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcC-------CC-------------h-----HH----hhhhcce
Q 003127 329 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG-------GD-------------F-----QA----ERQASKI 379 (845)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~-------~~-------------~-----~~----~~~~~~~ 379 (845)
..+++.||+.....+ ...|||.|.-+.+.....- .. . .. ..+.+.+
T Consensus 529 ~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si 603 (1140)
T KOG0208|consen 529 VAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISI 603 (1140)
T ss_pred HHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEE
Confidence 678888986554332 3467777776665432110 00 0 00 0014778
Q ss_pred EEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhhee
Q 003127 380 VKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 458 (845)
Q Consensus 380 l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~ 458 (845)
++.+||+|..+|||||++.+ +++..+|+|||||.|.+.|++ +.+| +.+++.+++|+.+|+|++|+|+
T Consensus 604 ~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tvP------~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 604 VKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETVP------ADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred EEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccCC------ccHHHHHHHHHhCCeEEEEEec
Confidence 99999999999999999975 467899999999999999974 2233 4588899999999999999999
Q ss_pred eecCCC-----CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--
Q 003127 459 MEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-- 531 (845)
Q Consensus 459 ~~i~~~-----~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~-- 531 (845)
|+++.. +...++.+|.|++|+|++.+|++++++++++|++|++++||.+|+||||..||..+||+||+..+..
T Consensus 672 K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v 751 (1140)
T KOG0208|consen 672 KELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKV 751 (1140)
T ss_pred CccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeE
Confidence 999876 2345688999999999999999999999999999999999999999999999999999999987643
Q ss_pred -----------------------------------------------------eeeeCccccc---CCHHHHhhhcCCee
Q 003127 532 -----------------------------------------------------IAIEGPEFRE---KSDEELSKLIPKIQ 555 (845)
Q Consensus 532 -----------------------------------------------------~~i~g~~~~~---~~~~~~~~~~~~~~ 555 (845)
.+++|+.++- ...+.+.+++.+..
T Consensus 752 ~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~ 831 (1140)
T KOG0208|consen 752 IIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT 831 (1140)
T ss_pred EEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe
Confidence 2233333322 12344556667888
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRS 635 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~ 635 (845)
||||++|.||.++++.+|+. |+.|+|+|||+||+.|||+||+||+++ ..+|.-||.++..-.+.+++.+.|+|||+
T Consensus 832 VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRa 907 (1140)
T KOG0208|consen 832 VFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRA 907 (1140)
T ss_pred EEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhh
Confidence 99999999999999999988 999999999999999999999999887 34678889999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHH
Q 003127 636 VYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV 715 (845)
Q Consensus 636 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~ 715 (845)
.+-.--.+++|+..|.++..+..+ .++.....++..|.++++++...+.++.++..+|..++-..+| ..+++++.
T Consensus 908 ALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~ 982 (1140)
T KOG0208|consen 908 ALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKK 982 (1140)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccccccc
Confidence 999999999999988776554433 3445567899999999999999888999999888888877777 56689988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--ccccCCCC----CccchhhhHHHHHHHHHHHhcccccccccccccc-cCCchhH
Q 003127 716 MWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVF-KGILKNY 788 (845)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~-~~~~~n~ 788 (845)
.+...++|.++...+.+..++... .|+..+.+ +..+...|..|..-.|.=+++++... ..+.| ++.++|+
T Consensus 983 ~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S---~g~pfr~pl~~n~ 1059 (1140)
T KOG0208|consen 983 ILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS---KGSPFRRPLWKNV 1059 (1140)
T ss_pred hhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec---cCCcccCchhcCc
Confidence 888888888777777666655432 22221111 11122344445433333344443322 22344 3666777
Q ss_pred HHHHHHHHHHHHH--HHHHHH---hhhcccccCCCh
Q 003127 789 VFVAVLTCTVLFQ--IIIIEL---LGTFANTTPLNL 819 (845)
Q Consensus 789 ~~~~~~~~~~~~~--~~~v~~---~~~~f~~~~l~~ 819 (845)
.+...+....... +..+.. ...+++.++.+-
T Consensus 1060 ~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1060 LFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred eeeeehhhHHhhhhhhhhccccchhhhhhceeccCc
Confidence 6554433332221 111111 124567777664
No 21
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-86 Score=701.63 Aligned_cols=755 Identities=21% Similarity=0.277 Sum_probs=588.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEE-ECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEe
Q 003127 27 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 105 (845)
Q Consensus 27 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~-r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~ 105 (845)
.....+++.|+.++++++..++..++.++++-++..|+.+.+++ |||...+ +++++++||+|+++.+++||||.++|.
T Consensus 125 ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLr 203 (1051)
T KOG0210|consen 125 IGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLR 203 (1051)
T ss_pred ecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEE
Confidence 34456678899999999999999999999998888888777776 6666555 999999999999999999999999999
Q ss_pred eCc----eeEecccCCCCCCccccc----------------------------------------------CCCCeEEec
Q 003127 106 GFS----VLINESSLTGESEPVNVN----------------------------------------------ALNPFLLSG 135 (845)
Q Consensus 106 ~~~----~~Vdes~LtGEs~p~~k~----------------------------------------------~~~~~v~~G 135 (845)
+++ |.|.+..||||++.+-|- .-+|.++++
T Consensus 204 Tsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWan 283 (1051)
T KOG0210|consen 204 TSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWAN 283 (1051)
T ss_pred ccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeee
Confidence 763 999999999999987660 114679999
Q ss_pred cEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc
Q 003127 136 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 215 (845)
Q Consensus 136 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (845)
|.+.+|.+.|+|+|||.+|+ -..+...++.|-..++.++|.+.+++..+.+.+++++...- |...
T Consensus 284 TVvAs~t~~gvVvYTG~dtR---svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~-----------g~~~- 348 (1051)
T KOG0210|consen 284 TVVASGTAIGVVVYTGRDTR---SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK-----------GFGS- 348 (1051)
T ss_pred eeEecCcEEEEEEEecccHH---HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh-----------cCCC-
Confidence 99999999999999999994 55566677778888999999999999888777776655431 1111
Q ss_pred cCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhc----CCceeecchhhhhccCcEEEEeccCCccCCC
Q 003127 216 WSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMN----DKALVRHLAACETMGSATSICSDKTGTLTTN 291 (845)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~----~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~ 291 (845)
.|...+...+.++...+|.+|-..+.++...-..++.+ .|.++|+.+..|+||+++++.+|||||||+|
T Consensus 349 -------~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqN 421 (1051)
T KOG0210|consen 349 -------DWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQN 421 (1051)
T ss_pred -------chHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccc
Confidence 23455666677777889999988888887776666654 3678999999999999999999999999999
Q ss_pred CeEEEEEEEcCeeEEecCC----------CC----CCC-----CCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceEEc
Q 003127 292 HMTVLKACICEEIKEVDNS----------KG----TPA-----FGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEIL 351 (845)
Q Consensus 292 ~m~v~~~~~~~~~~~~~~~----------~~----~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 351 (845)
+|.+++++.+.-.|..+.. .. .+. ........ ......++.+||+..+..++++ ..+..
T Consensus 422 EM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~r-v~~~V~alalCHNVTPv~e~~ge~sYQA 500 (1051)
T KOG0210|consen 422 EMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSAR-VRNAVLALALCHNVTPVFEDDGEVSYQA 500 (1051)
T ss_pred hheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHH-HHHHHHHHHHhccCCcccCCCceEEeec
Confidence 9999999987665542210 00 000 00111122 2334567888999988887764 45669
Q ss_pred CCchHHHHHHHHHHcCCChHHhh-------------hhcceEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHh
Q 003127 352 GTPTETAILEFGLLLGGDFQAER-------------QASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAA 417 (845)
Q Consensus 352 ~~p~e~al~~~~~~~~~~~~~~~-------------~~~~~l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~ 417 (845)
.+|+|.|++++.+..|....+++ .+|++++.|||+|++|||++||+++ .+++..|.|||+.+|-..
T Consensus 501 aSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~i 580 (1051)
T KOG0210|consen 501 ASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGI 580 (1051)
T ss_pred CCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcc
Confidence 99999999999998887644332 3799999999999999999999976 578999999998776543
Q ss_pred chhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCC---------------CCC--------CCCCCC
Q 003127 418 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------SAD--------APIPTE 474 (845)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~---------------~~~--------~~~~e~ 474 (845)
-+. .+++++....++++|+|++.+|+|.+++++ .+. ...+|+
T Consensus 581 Vq~---------------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~ 645 (1051)
T KOG0210|consen 581 VQY---------------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLER 645 (1051)
T ss_pred ccc---------------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHh
Confidence 321 256788899999999999999999998761 000 135789
Q ss_pred ceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------
Q 003127 475 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 531 (845)
Q Consensus 475 ~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~----------------------- 531 (845)
|++++|++|+||+++++++.+++.||+||||+||+|||+.+||..+|+..++...+.
T Consensus 646 dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~ 725 (1051)
T KOG0210|consen 646 DLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRR 725 (1051)
T ss_pred hhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999976432
Q ss_pred -----eeeeCcccccC---CHHHHhhhc--CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 532 -----IAIEGPEFREK---SDEELSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 532 -----~~i~g~~~~~~---~~~~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
++++|+.+... .++++.++. ....++||++|.||+++++.+|++.|+.|+++|||.||++|+++||+||.
T Consensus 726 k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiG 805 (1051)
T KOG0210|consen 726 KTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIG 805 (1051)
T ss_pred CCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeeccccee
Confidence 67777766533 234455544 34569999999999999999999989999999999999999999999995
Q ss_pred eCCCCcHH--HHhccCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHH---H
Q 003127 602 MGIAGTEV--AKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ---L 675 (845)
Q Consensus 602 mg~~~~~~--ak~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~---~ 675 (845)
+.|.|. |.-|||+.+.. |..+.+++ -|||..|+|..+.-+|.+.+.+....++..|+....+.|..-+| +
T Consensus 806 --I~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~Lm 881 (1051)
T KOG0210|consen 806 --IVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLM 881 (1051)
T ss_pred --eecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHH
Confidence 445554 77889999987 99999975 78999999999999999999999999999888777776665554 4
Q ss_pred HHHHHHHHHHhhhhhccCC-CCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcc
Q 003127 676 LWVNMIMDTLGALALATEP-PNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPD 750 (845)
Q Consensus 676 l~~~~~~~~~p~~~l~~~~-~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (845)
.-|..+++++|.+++..+. ..++.....|. -.+++.++.+.|+.|++.++||+.++++..+.- |. ...
T Consensus 882 vgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l---~~----~ef 954 (1051)
T KOG0210|consen 882 VGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLL---FD----TEF 954 (1051)
T ss_pred HHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHH---hh----hhh
Confidence 4578899999999998743 34444444553 245677888889889999999999887743211 11 001
Q ss_pred chhhhHHHHHHHHHHHhc-ccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhhcccccC-CChHHHHHHHHH
Q 003127 751 LILNTLIFNTFVFCQVFN-EISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTP-LNLQQWFVSILL 828 (845)
Q Consensus 751 ~~~~t~~f~~~v~~q~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~-l~~~~w~~~~~~ 828 (845)
....++.|.++++.++.- ++..+ . | +|.++.+-+.+..++++.++++.++|.... ++|.+.+.+.++
T Consensus 955 ~~ivaisFtaLi~tELiMVaLtv~---t---w-----~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I 1023 (1051)
T KOG0210|consen 955 IHIVAISFTALILTELIMVALTVR---T---W-----HWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVI 1023 (1051)
T ss_pred eEeeeeeeHHHHHHHHHHHhhhhh---h---h-----hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 123455677777766432 22222 1 2 456677777788887888899999888765 456666666777
Q ss_pred HHHHHHHHHHHhhc
Q 003127 829 GFLGMPIAAVLKLI 842 (845)
Q Consensus 829 ~~~~~~~~~i~K~~ 842 (845)
-++.+++..+.|.+
T Consensus 1024 ~~vS~Lpl~~~K~l 1037 (1051)
T KOG0210|consen 1024 TLVSCLPLYFIKAL 1037 (1051)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777754
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=4.4e-81 Score=713.01 Aligned_cols=539 Identities=26% Similarity=0.371 Sum_probs=437.5
Q ss_pred hHHHHHHHHHHHHHHhhccc-----CCCCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEE-C
Q 003127 2 TLMILAVCALVSLVVGIATE-----GWPKGAHDG---LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR-N 72 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~-----~~~~~~~~~---~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r-~ 72 (845)
++++|+++|++|+++++.+. ++...|++. +.+++.+++..++++..+++.+++.+++.+...+..++|+| |
T Consensus 34 ~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d 113 (675)
T TIGR01497 34 VMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD 113 (675)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC
Confidence 68999999999999987421 111246764 33334444555566677777777887777655455688885 8
Q ss_pred CeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEE
Q 003127 73 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 73 g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~t 150 (845)
|++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|+.++. .+|+||.+.+|+++++|+++
T Consensus 114 g~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~ 192 (675)
T TIGR01497 114 GAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTAN 192 (675)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEe
Confidence 99999999999999999999999999999999995 7999999999999999987653 39999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|++||+.+++++++.+++|+|..++.+...+..+.++ +++.++.... + .+ . . ..+..
T Consensus 193 g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~----~-~~-------~---~--~~~~~ 252 (675)
T TIGR01497 193 PGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA----Y-GG-------N---A--ISVTV 252 (675)
T ss_pred cccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH----h-cC-------h---h--HHHHH
Confidence 9999999999999998888899998877765544322221 1112111110 0 00 0 1 13556
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
++++++++|||+++...+.....++.+|.++|+++|+.+++|++|++|++|||||||||+|+|++.+++..+..
T Consensus 253 lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~------ 326 (675)
T TIGR01497 253 LVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV------ 326 (675)
T ss_pred HHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC------
Confidence 78899999999988888777778999999999999999999999999999999999999999999987642211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCc
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKK 390 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 390 (845)
. .+.+......|+.. ..||.++|+++++++.+.+... ..++..+..||++.++
T Consensus 327 ------------~-~~~ll~~aa~~~~~------------s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~~~ 379 (675)
T TIGR01497 327 ------------D-EKTLADAAQLASLA------------DDTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQTR 379 (675)
T ss_pred ------------c-HHHHHHHHHHhcCC------------CCCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCCCc
Confidence 0 12233333333321 4689999999999887654322 1234567899999988
Q ss_pred eEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCC
Q 003127 391 QMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 470 (845)
Q Consensus 391 ~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~ 470 (845)
++++.+. ++ ..+.||++|.+++.|.. +|...| +.+++..++++++|.|++++|+
T Consensus 380 ~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------------ 433 (675)
T TIGR01497 380 MSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------------ 433 (675)
T ss_pred EEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------------
Confidence 8876543 22 46899999999988752 222222 3467778899999999999995
Q ss_pred CCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 471 ~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
|.+++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+++
T Consensus 434 ----~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------------- 487 (675)
T TIGR01497 434 ----DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------------- 487 (675)
T ss_pred ----CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------------
Confidence 357999999999999999999999999999999999999999999999999974
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+++|++|++|.++++.+|++ |+.|+|+|||.||+|||++||+||||| +|++.+|++||+++.+||+..+.+++
T Consensus 488 -----v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 488 -----FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred -----EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003127 631 KWGRSVYINIQKFVQFQLTVNVV 653 (845)
Q Consensus 631 ~~gR~~~~~i~~~i~~~l~~n~~ 653 (845)
++||+++-+-.....|++..++.
T Consensus 561 ~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 561 HIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999877664
No 23
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-78 Score=641.06 Aligned_cols=613 Identities=23% Similarity=0.379 Sum_probs=483.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCC
Q 003127 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYD 82 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~ 82 (845)
-|++-+||++++.+.-- .+.+..|.|...|...+++...++.++|+........+++... .+++|+|||+|.++.+++
T Consensus 74 swVMEaAAimA~~Lang-~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~ 151 (942)
T KOG0205|consen 74 SWVMEAAAIMAIGLANG-GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASI 151 (942)
T ss_pred HHHHHHHHHHHHHHhcC-CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccc
Confidence 46778899988877532 2334489999988888888888888888888888888876544 478999999999999999
Q ss_pred cCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHh
Q 003127 83 LLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMAT 162 (845)
Q Consensus 83 l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 162 (845)
||||||+.++.|++||||++|++++-+.||+|.|||||.|+.|.+++. +|+||++.+|++.++|++||.+|..||-+.+
T Consensus 152 lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~L 230 (942)
T KOG0205|consen 152 LVPGDILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (942)
T ss_pred cccCceeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHh
Confidence 999999999999999999999999989999999999999999988776 9999999999999999999999999999998
Q ss_pred hccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhh-cCC
Q 003127 163 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPE 241 (845)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~P~ 241 (845)
+.. ......+++-++.+.++..+.+.+ .+++- +...+..+. .........+.++++. +|.
T Consensus 231 Vds-t~~~GHFqkVLt~IGn~ci~si~~-g~lie--~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPi 291 (942)
T KOG0205|consen 231 VDS-TNQVGHFQKVLTGIGNFCICSIAL-GMLIE--ITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPI 291 (942)
T ss_pred hcC-CCCcccHHHHHHhhhhHHHHHHHH-HHHHH--HHhhhhhhh---------------hhhhhhhhheheeeeccccc
Confidence 887 445688999999888776554322 22111 111111110 1122233344445555 999
Q ss_pred chHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEE--E--EEcCeeEEecCCCCCCCCC
Q 003127 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--A--CICEEIKEVDNSKGTPAFG 317 (845)
Q Consensus 242 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~--~--~~~~~~~~~~~~~~~~~~~ 317 (845)
++|..+++.++.++.+++++|+++|+.+++|+++.+|++|+|||||||.|++++.+ + +..+
T Consensus 292 amPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g--------------- 356 (942)
T KOG0205|consen 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG--------------- 356 (942)
T ss_pred ccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC---------------
Confidence 99999999999999999999999999999999999999999999999999999976 2 1111
Q ss_pred CCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEE
Q 003127 318 SSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIE 397 (845)
Q Consensus 318 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 397 (845)
..++ .-++..+.. + . ....|..|.|++...+. ..+.+..++.++.+||++..||....+.
T Consensus 357 --v~~D-~~~L~A~rA--s--r---------~en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~ 416 (942)
T KOG0205|consen 357 --VDKD-DVLLTAARA--S--R---------KENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYI 416 (942)
T ss_pred --CChH-HHHHHHHHH--h--h---------hcChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEE
Confidence 1111 112222211 1 1 11457899999987653 4566778999999999999999999999
Q ss_pred cCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceE
Q 003127 398 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYT 477 (845)
Q Consensus 398 ~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~ 477 (845)
+++|+....+||||+.|++.|.. +.+.++...+.+++|+++|+|-+++|++..++... +.-.....
T Consensus 417 d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~ 482 (942)
T KOG0205|consen 417 DPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWE 482 (942)
T ss_pred CCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcc
Confidence 99999999999999999999974 23345778899999999999999999998877532 22345688
Q ss_pred EEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc------ccCCHHHHhhhc
Q 003127 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF------REKSDEELSKLI 551 (845)
Q Consensus 478 ~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~------~~~~~~~~~~~~ 551 (845)
|+|+.-+-||+|.++.++|++....|+.|.|+|||...-++..++++|.-.+ ...+.++ ..+......+.+
T Consensus 483 ~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtn---mypss~llG~~~~~~~~~~~v~eli 559 (942)
T KOG0205|consen 483 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN---MYPSSALLGLGKDGSMPGSPVDELI 559 (942)
T ss_pred cccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccC---cCCchhhccCCCCCCCCCCcHHHHh
Confidence 9999999999999999999999999999999999999999999999997643 1111111 122223445556
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+..-|+.+.|++|.++|+.||++ ++.++|+|||+||.|+||+||+|||+. .++|.|+.++|+|+....++-+..++.
T Consensus 560 e~adgfAgVfpehKy~iV~~Lq~r-~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avl 637 (942)
T KOG0205|consen 560 EKADGFAGVFPEHKYEIVKILQER-KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVL 637 (942)
T ss_pred hhccCccccCHHHHHHHHHHHhhc-CceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHH
Confidence 666788999999999999999999 999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCC
Q 003127 632 WGRSVYINIQKFVQFQLTVNVVALI-VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEP 694 (845)
Q Consensus 632 ~gR~~~~~i~~~i~~~l~~n~~~~~-~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~ 694 (845)
.+|.+|+|++.+..|.++..+-.++ +.++..++ ..-|++...+++.++-|. +..+++.+.
T Consensus 638 tSraIfqrmknytiyavsitiriv~gfml~alIw--~~df~pfmvliiailnd~-t~mtis~d~ 698 (942)
T KOG0205|consen 638 TSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIW--EFDFSPFMVLIIAILNDG-TIMTISKDR 698 (942)
T ss_pred HHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHhcCC-ceEEEEccc
Confidence 9999999999998888776554331 11111222 344566666666555553 344444433
No 24
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-76 Score=674.48 Aligned_cols=474 Identities=31% Similarity=0.417 Sum_probs=400.2
Q ss_pred hcCCeeEEEE-CCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEe
Q 003127 62 KKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN 140 (845)
Q Consensus 62 ~~~~~~~V~r-~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~ 140 (845)
..+.++++++ ||++++++.+|+++||+|.++|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+
T Consensus 208 l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~ 285 (713)
T COG2217 208 LAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLD 285 (713)
T ss_pred cCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECC
Confidence 4577887776 5668999999999999999999999999999999986 999999999999999988775 999999999
Q ss_pred ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCC
Q 003127 141 GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220 (845)
Q Consensus 141 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (845)
|..+.+|+++|.+|.++||.+++++++.+++|+|+..|+++.++++.+++++++++++|.+.. +
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~--------- 349 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G--------- 349 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C---------
Confidence 999999999999999999999999999999999999999999999999999988888654321 0
Q ss_pred hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEE
Q 003127 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300 (845)
Q Consensus 221 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 300 (845)
.++...+..++++++++|||+|.+++|+++..+..+.+++|+++|+.+++|.++++|+++||||||||+|+|+|.++..
T Consensus 350 -~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~ 428 (713)
T COG2217 350 -GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVA 428 (713)
T ss_pred -CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEec
Confidence 0355678889999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceE
Q 003127 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIV 380 (845)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l 380 (845)
.+. + ..+.+..+... ...+.||..+|++++++..+... .+..
T Consensus 429 ~~~--~-----------------e~~~L~laAal-------------E~~S~HPiA~AIv~~a~~~~~~~------~~~~ 470 (713)
T COG2217 429 LDG--D-----------------EDELLALAAAL-------------EQHSEHPLAKAIVKAAAERGLPD------VEDF 470 (713)
T ss_pred CCC--C-----------------HHHHHHHHHHH-------------HhcCCChHHHHHHHHHHhcCCCC------ccce
Confidence 443 0 12233222222 12378999999999988776211 0111
Q ss_pred EEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 381 KVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 381 ~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
+.+| -.++--+.++ ..+.-|++..+.+. +...+ . ..+..+.+.++|..++.++
T Consensus 471 ~~i~------G~Gv~~~v~g---~~v~vG~~~~~~~~--------~~~~~--~-----~~~~~~~~~~~G~t~v~va--- 523 (713)
T COG2217 471 EEIP------GRGVEAEVDG---ERVLVGNARLLGEE--------GIDLP--L-----LSERIEALESEGKTVVFVA--- 523 (713)
T ss_pred eeec------cCcEEEEECC---EEEEEcCHHHHhhc--------CCCcc--c-----hhhhHHHHHhcCCeEEEEE---
Confidence 2222 1122212222 23344776655332 11111 0 3455677777887666555
Q ss_pred cCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 461 IGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 461 i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
.|.+++|+++++|++|++++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 524 -------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------ 578 (713)
T COG2217 524 -------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------ 578 (713)
T ss_pred -------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------
Confidence 4568999999999999999999999999999999999999999999999999975
Q ss_pred cCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 541 ~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
+++.+.|++|.+.|+.+|++ |+.|+|+|||.||+|+|.+|||||||| +|+|.++++||+++.+
T Consensus 579 ---------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~ 641 (713)
T COG2217 579 ---------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMR 641 (713)
T ss_pred ---------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEec
Confidence 89999999999999999988 999999999999999999999999999 7999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 621 DNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661 (845)
Q Consensus 621 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 661 (845)
|++..+.++++.+|++++++++|+.|++.||.+.+.+..+.
T Consensus 642 ~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 642 DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998887654
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=5.4e-73 Score=669.10 Aligned_cols=515 Identities=24% Similarity=0.335 Sum_probs=417.9
Q ss_pred HHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCC
Q 003127 7 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPG 86 (845)
Q Consensus 7 ~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~G 86 (845)
.+|++.++++| .|.++..++..+.+--++....+.+.++..+++.+ ..+.+++|+|||+++++++++|+||
T Consensus 194 ~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~G 264 (741)
T PRK11033 194 SVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPG 264 (741)
T ss_pred HHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCC
Confidence 34555566655 35555443332222222333333333333444443 4577899999999999999999999
Q ss_pred cEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccC
Q 003127 87 DIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 166 (845)
Q Consensus 87 Dii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 166 (845)
|+|.+++||+|||||++++|+ ..||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.++|+.+.+++.
T Consensus 265 Div~v~~G~~IP~Dg~vi~g~-~~vdes~lTGEs~Pv~k~~Gd-~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a 342 (741)
T PRK11033 265 DVIEVAAGGRLPADGKLLSPF-ASFDESALTGESIPVERATGE-KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA 342 (741)
T ss_pred CEEEECCCCEEecceEEEECc-EEeecccccCCCCCEecCCCC-eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh
Confidence 999999999999999999997 699999999999999998766 599999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHH
Q 003127 167 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 246 (845)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~ 246 (845)
+.+++|+|+.+++++.+++++++.++++++++|...+ +. .+...+..++++++++|||+|.++
T Consensus 343 ~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~la 405 (741)
T PRK11033 343 EERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVIS 405 (741)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhh
Confidence 9889999999999999999999999998888753211 10 234557778999999999999999
Q ss_pred HHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHH
Q 003127 247 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 326 (845)
Q Consensus 247 ~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (845)
+|+++..+..+++|+|+++|+.+++|+|+++|++|||||||||+|+|+|.++...+.. .+ .+
T Consensus 406 tP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~--~~ 467 (741)
T PRK11033 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------SE--SE 467 (741)
T ss_pred hHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------CH--HH
Confidence 9999999999999999999999999999999999999999999999999988643321 11 12
Q ss_pred HHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEE-EEEEc-CCCeEE
Q 003127 327 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG-VVIEL-PEGGFR 404 (845)
Q Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~s-viv~~-~~~~~~ 404 (845)
.+..+.... ..+.||.++|+++++++.+.+ +||.++++.+. ..++. -++..
T Consensus 468 ~l~~aa~~e-------------~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~- 520 (741)
T PRK11033 468 LLALAAAVE-------------QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGER- 520 (741)
T ss_pred HHHHHHHHh-------------cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEE-
Confidence 222221111 126799999999998876543 46666666542 22321 12222
Q ss_pred EEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeee
Q 003127 405 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 484 (845)
Q Consensus 405 ~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~ 484 (845)
+.-|+++.+.+ ++ +.+.+.++++.++|.|++++|+ |.+++|++++
T Consensus 521 -~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l 565 (741)
T PRK11033 521 -VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIAL 565 (741)
T ss_pred -EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEE
Confidence 22477765532 11 2244556788999999999984 4589999999
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
+|++|++++++|++|+++|++++|+|||+..++.++|+++|+. .+++..|++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~ 617 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPED 617 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999999995 456789999
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 644 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i 644 (845)
|.++++.+++. +.|+|+|||.||+|||++||+||||| ++++.++++||+++.++++.++.++++.||++++|+++|+
T Consensus 618 K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl 694 (741)
T PRK11033 618 KVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNI 694 (741)
T ss_pred HHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999954 58999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003127 645 QFQLTVNVVALIVNFS 660 (845)
Q Consensus 645 ~~~l~~n~~~~~~~~~ 660 (845)
.|++.+|.+.+.+.++
T Consensus 695 ~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 695 TIALGLKAIFLVTTLL 710 (741)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877654
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4e-73 Score=650.37 Aligned_cols=475 Identities=40% Similarity=0.612 Sum_probs=415.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccC
Q 003127 38 LLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL 116 (845)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~L 116 (845)
++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||+|
T Consensus 7 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes~L 84 (499)
T TIGR01494 7 LLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDESNL 84 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcccc
Confidence 44555666666777777777665 3678899999999 999999999999999999999999999999995 89999999
Q ss_pred CCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 003127 117 TGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAVVT 195 (845)
Q Consensus 117 tGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~ 195 (845)
||||.|+.|.+++. +++||.+.+|+.+++|+++|.+|..+++...+.+....+++++++.+++. .++.++.+.+++++
T Consensus 85 TGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (499)
T TIGR01494 85 TGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAV 163 (499)
T ss_pred cCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987665 99999999999999999999999999999999888777899999999999 78877777777777
Q ss_pred HHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhcc
Q 003127 196 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMG 275 (845)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg 275 (845)
++.|..... .. . .+...+..++++++++|||+|++++++++..+..+++++|+++|+++++|+||
T Consensus 164 ~~~~~~~~~-----~~-------~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~ 228 (499)
T TIGR01494 164 FLFWAIGLW-----DP-------N---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELG 228 (499)
T ss_pred HHHHHHHHc-----cc-------c---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhcc
Confidence 666543210 00 0 25567888999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCch
Q 003127 276 SATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPT 355 (845)
Q Consensus 276 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ 355 (845)
++|++|||||||||+|+|++.+++..+. .+.++||.
T Consensus 229 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~hp~ 264 (499)
T TIGR01494 229 KVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGHPD 264 (499)
T ss_pred CCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCChH
Confidence 9999999999999999999998865321 01267999
Q ss_pred HHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHH
Q 003127 356 ETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAA 435 (845)
Q Consensus 356 e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~ 435 (845)
|.|++++++... ++..||++.+++|+++++.+++ .++||+++.+.+.|..
T Consensus 265 ~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------------- 314 (499)
T TIGR01494 265 ERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------------- 314 (499)
T ss_pred HHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH---------------
Confidence 999999886421 2468999999999999986433 3689999999988752
Q ss_pred HHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHH
Q 003127 436 VNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN 515 (845)
Q Consensus 436 ~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ 515 (845)
+.+..++++++|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+|||+..
T Consensus 315 ---~~~~~~~~~~~g~~~~~~a~~~----------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~ 375 (499)
T TIGR01494 315 ---LEEKVKELAQSGLRVLAVASKE----------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVL 375 (499)
T ss_pred ---HHHHHHHHHhCCCEEEEEEECC----------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHH
Confidence 1233456788999999999652 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHh
Q 003127 516 TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595 (845)
Q Consensus 516 ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~ 595 (845)
++..+|+++|+ +++.+|++|.++++.+|+. |+.|+|+|||.||++|+++
T Consensus 376 ~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~~ 424 (499)
T TIGR01494 376 TAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALKK 424 (499)
T ss_pred HHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHHh
Confidence 99999999985 4789999999999999988 8999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 596 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 596 A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
||+||||+ ++++||+++.++++..+..++.+||+.++++++++.|.+++|++.+.+.++
T Consensus 425 Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 425 ADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 588999999999999999999999999999999999999999998877765
No 27
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-72 Score=612.18 Aligned_cols=757 Identities=22% Similarity=0.273 Sum_probs=542.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCeeEEEECCeEEEEecCCcCCCcEEEEcC---CCeeeccE
Q 003127 26 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADG 101 (845)
Q Consensus 26 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~---G~~iPaD~ 101 (845)
-|+.+ ++.+++++.+.+..-+++-++....++. ..+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.
T Consensus 216 yWYyS---lFtLfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDl 292 (1160)
T KOG0209|consen 216 YWYYS---LFTLFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDL 292 (1160)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceE
Confidence 36554 3455666667776667777777777763 44678999999999999999999999999998 57899999
Q ss_pred EEEeeCceeEecccCCCCCCcccccC----------------CCCeEEeccEEE-------------eceEEEEEEEEee
Q 003127 102 LFVSGFSVLINESSLTGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGM 152 (845)
Q Consensus 102 ~ll~~~~~~Vdes~LtGEs~p~~k~~----------------~~~~v~~Gt~v~-------------~g~~~~~V~~tG~ 152 (845)
+++.|+ |.|||++|||||.|.-|++ +..++|+||+++ +|.+.+.|.+||.
T Consensus 293 lLL~Gs-ciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGF 371 (1160)
T KOG0209|consen 293 LLLRGS-CIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGF 371 (1160)
T ss_pred EEEecc-eeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccc
Confidence 999996 8999999999999998842 234799999998 4568899999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|..|++.+.+....++-|.-.+. .+.+++.+++|.+...++.+.. |. .+...+=.+.|.-++
T Consensus 372 eTSQGkLvRtilf~aervTaNn~E---------tf~FILFLlVFAiaAa~Yvwv~---Gs-----kd~~RsrYKL~LeC~ 434 (1160)
T KOG0209|consen 372 ETSQGKLVRTILFSAERVTANNRE---------TFIFILFLLVFAIAAAGYVWVE---GS-----KDPTRSRYKLFLECT 434 (1160)
T ss_pred cccCCceeeeEEecceeeeeccHH---------HHHHHHHHHHHHHHhhheEEEe---cc-----cCcchhhhheeeeee
Confidence 999999998887766654543322 1223334444444443333221 11 011112234556677
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
.++...+|+.||+-++++.-.+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|.++-...... .
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~------~ 508 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE------G 508 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc------c
Confidence 7888899999999999999999999999999999999999999999999999999999999999876422211 0
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCC---h---HHhhhhcceEEEecCC
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD---F---QAERQASKIVKVEPFN 386 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~---~---~~~~~~~~~l~~~~F~ 386 (845)
.....+..+.+... .+..||+.....+ ...|||.|+|.++.....--. . +...+..++.+.+.|+
T Consensus 509 ~~~~~s~~p~~t~~----vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 509 ALTPASKAPNETVL----VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred cccchhhCCchHHH----HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 00111222333333 3445555443322 268999999999876211100 0 1111246778899999
Q ss_pred CCCceEEEEEEcCC----CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecC
Q 003127 387 SVKKQMGVVIELPE----GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG 462 (845)
Q Consensus 387 s~~k~~sviv~~~~----~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~ 462 (845)
|+.||||++.+..+ .++.+.+|||||+|-++.++. .+.+++..++|+++|.||+|++||+++
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv--------------P~dY~~iYk~ytR~GsRVLALg~K~l~ 645 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV--------------PKDYDEIYKRYTRQGSRVLALGYKPLG 645 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC--------------chhHHHHHHHHhhccceEEEEeccccc
Confidence 99999999998543 368899999999998876532 245778899999999999999999998
Q ss_pred CC-----CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc------
Q 003127 463 NE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------ 531 (845)
Q Consensus 463 ~~-----~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~------ 531 (845)
.- .+.+++.+|.|++|.|++.+..|++++++++|+.|++++++++|+|||++.||.++|+++|+.....
T Consensus 646 ~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~ 725 (1160)
T KOG0209|consen 646 DMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLP 725 (1160)
T ss_pred ccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccC
Confidence 43 2345678999999999999999999999999999999999999999999999999999999975422
Q ss_pred -----------------------------------eeeeCcccccCCH-HHHhhhcCCeeEEEEeChhcHHHHHHHHHhh
Q 003127 532 -----------------------------------IAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTT 575 (845)
Q Consensus 532 -----------------------------------~~i~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 575 (845)
++++|+.+..+.. +.+.++++.+.||||+.|.||..++..+++.
T Consensus 726 ~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 726 EEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred ccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc
Confidence 2334444433322 2456677889999999999999999999998
Q ss_pred cCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHH---------------------------------------------
Q 003127 576 LGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA--------------------------------------------- 610 (845)
Q Consensus 576 ~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~a--------------------------------------------- 610 (845)
|+.++|+|||.||+.|||+||||||+-+|..|..
T Consensus 806 -Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 884 (1160)
T KOG0209|consen 806 -GYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKT 884 (1160)
T ss_pred -CeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHH
Confidence 9999999999999999999999999863332100
Q ss_pred -------------------------HhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 611 -------------------------KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 665 (845)
Q Consensus 611 -------------------------k~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 665 (845)
.-+|.+.....+.+++.+.|++||+..-+.-+++... .-|..... ..++.++.
T Consensus 885 ~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~LisA-YslSvlyl 962 (1160)
T KOG0209|consen 885 RERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCLISA-YSLSVLYL 962 (1160)
T ss_pred HHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHHHHH-HHHHHhhh
Confidence 0123344444467789999999999988776666543 23332221 22235556
Q ss_pred CCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc----
Q 003127 666 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV---- 741 (845)
Q Consensus 666 ~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 741 (845)
-+.-|+..|...--++.. ...+.+...+|-+.+.++.|. .+++|...+.+++.|..++...++|+.......
T Consensus 963 dGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~ 1038 (1160)
T KOG0209|consen 963 DGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPE 1038 (1160)
T ss_pred cCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcc
Confidence 667788888766554443 335666677888888888884 458999988889988888888777765432211
Q ss_pred c--cCCCCCccchhhhHHHHHHHHHHHhc-ccccccccccccccCCchhHHHHHHHHHHHHHHHHHH----HHhhhcccc
Q 003127 742 F--RLDGPDPDLILNTLIFNTFVFCQVFN-EISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIII----ELLGTFANT 814 (845)
Q Consensus 742 ~--~~~~~~~~~~~~t~~f~~~v~~q~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v----~~~~~~f~~ 814 (845)
- ....+...+...|.+|..-...|+.. +.| +...||....+.|+-+..+++.+..+.+... |=++.-|.+
T Consensus 1039 ~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVN---Y~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~l 1115 (1160)
T KOG0209|consen 1039 EKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVN---YQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFEL 1115 (1160)
T ss_pred cccChhcccChhhhhhHHHHHHHHHHHHHhhhh---ccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheee
Confidence 0 11111233456677776555556543 233 3355677788899988888876655533222 335678888
Q ss_pred cCCChHHH----HHHHHHHHHHHHHHHHHhhc
Q 003127 815 TPLNLQQW----FVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 815 ~~l~~~~w----~~~~~~~~~~~~~~~i~K~~ 842 (845)
++++-.+= .+.++--+++++++.+.|++
T Consensus 1116 V~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1116 VDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88873322 22333345567778777765
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5e-72 Score=646.73 Aligned_cols=524 Identities=28% Similarity=0.406 Sum_probs=424.6
Q ss_pred HHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECC-eEEEEecCCc
Q 003127 5 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDL 83 (845)
Q Consensus 5 il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g-~~~~i~~~~l 83 (845)
++.++++++++++ .|.++..+++.+++.-++....+.+.++..+++.+ .++.+++|+||| +++++++++|
T Consensus 4 l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l 74 (556)
T TIGR01525 4 LMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEEL 74 (556)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHC
Confidence 4566777888877 46677666555555555555555555555555543 456789999996 9999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 163 (845)
+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISGE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCCEEEECCCCEeccceEEEecc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999997 699999999999999998755 699999999999999999999999999999999
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCch
Q 003127 164 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 243 (845)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l 243 (845)
.+.+.+++|+++.+++++++++++++++++++++++... +. . ..+..++++++++|||+|
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~--------~~----------~--~~~~~~~~vlv~~~P~al 212 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL--------GA----------L--GALYRALAVLVVACPCAL 212 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cc----------c--hHHHHHHHHHhhccccch
Confidence 888888899999999999999999888888887765321 00 1 466778999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChh
Q 003127 244 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPAS 323 (845)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (845)
++++++++..+.++++++|+++|+++++|+||++|++|||||||||+|+|++.++...+... . .
T Consensus 213 ~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------~--~ 276 (556)
T TIGR01525 213 GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------I--S 276 (556)
T ss_pred hehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------c--c
Confidence 99999999999999999999999999999999999999999999999999999987543211 0 0
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeE
Q 003127 324 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF 403 (845)
Q Consensus 324 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 403 (845)
..+.+..+.... ..+.||.+.|+++++++.+.+... .+ ..+. .++.++
T Consensus 277 ~~~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~~~~~~~---~~-~~~~---------------~~~~gi 324 (556)
T TIGR01525 277 EEELLALAAALE-------------QSSSHPLARAIVRYAKKRGLELPK---QE-DVEE---------------VPGKGV 324 (556)
T ss_pred HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCccc---cc-CeeE---------------ecCCeE
Confidence 112221111111 125799999999999887654221 00 0111 122334
Q ss_pred EEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEee
Q 003127 404 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 483 (845)
Q Consensus 404 ~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~ 483 (845)
..+++|+++..+..|+.. ..++.. ....++..++++++|+|++.++. |.+++|.+.
T Consensus 325 ~~~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~~----------------~~~~~g~i~ 380 (556)
T TIGR01525 325 EATVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVAV----------------DGELLGVIA 380 (556)
T ss_pred EEEECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEEE----------------CCEEEEEEE
Confidence 444455444444444321 111111 11223456678889999988873 458999999
Q ss_pred ecCCCChhHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++|+++|+++++|++|+++| ++++++|||+..++.++++++|+.. +|+++.|
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 433 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLP 433 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCH
Confidence 99999999999999999999 9999999999999999999999964 7889999
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
++|.++++.+++. ++.++|+|||.||++|+++||+|++|| ++++.+++.||+++.+++++++.++++.||+.++|+++
T Consensus 434 ~~K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 889999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~ 660 (845)
++.|++.+|++.+.+.++
T Consensus 512 nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAG 529 (556)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999877654
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.1e-70 Score=631.17 Aligned_cols=505 Identities=27% Similarity=0.351 Sum_probs=411.3
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCc
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDL 83 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l 83 (845)
.++.+++++++++| .|.++..+++.+++..++....+.+.++..+++.+ .++.+++|+|||+++++++++|
T Consensus 3 ~l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l 73 (536)
T TIGR01512 3 LLMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEEL 73 (536)
T ss_pred HHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHC
Confidence 35678888888887 58888766655555555555555555555555554 4577899999999999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 163 (845)
+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+||+.+.+
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 999999999999999999999996 699999999999999998755 699999999999999999999999999999999
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCch
Q 003127 164 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 243 (845)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l 243 (845)
.+.+.+++|+++.+++++++++++++.+++++++++.. .. . +...+..++++++++|||+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~------------~~~~~~~~~svlv~~~P~aL 212 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK----R------------WPFWVYRALVLLVVASPCAL 212 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc----c------------cHHHHHHHHHHHhhcCcccc
Confidence 98888889999999999999999888877766665421 10 0 01156678899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChh
Q 003127 244 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPAS 323 (845)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (845)
++++++++..+..+++++|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 213 ~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------- 270 (536)
T TIGR01512 213 VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------- 270 (536)
T ss_pred ccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------
Confidence 9999999999999999999999999999999999999999999999999999887421
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeE
Q 003127 324 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF 403 (845)
Q Consensus 324 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 403 (845)
+.+..+.... ..+.||.+.|+++++++.+ . .......|- +.+... .++..
T Consensus 271 --~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~~-~-------~~~~~~~~g----~gi~~~--~~g~~- 320 (536)
T TIGR01512 271 --EVLRLAAAAE-------------QASSHPLARAIVDYARKRE-N-------VESVEEVPG----EGVRAV--VDGGE- 320 (536)
T ss_pred --HHHHHHHHHh-------------ccCCCcHHHHHHHHHHhcC-C-------CcceEEecC----CeEEEE--ECCeE-
Confidence 1222221111 1267999999999987653 1 111111221 111111 12222
Q ss_pred EEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEee
Q 003127 404 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 483 (845)
Q Consensus 404 ~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~ 483 (845)
+..|+++.+.+. +. .++..+|.+++.++ .|..+.|.+.
T Consensus 321 --~~ig~~~~~~~~--------~~----------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 321 --VRIGNPRSLEAA--------VG----------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred --EEEcCHHHHhhc--------CC----------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 224766433211 10 03444565554333 4678999999
Q ss_pred ecCCCChhHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++|+++|+++++|++|+++|+ +++++|||+..++.++++++|+.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 6788899
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
++|.++++.++++ ++.++|+|||.||++|+++||+||+||.++++.+++.||+++.+++++.+.++++.||++++++++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~ 660 (845)
++.|++.+|++.+.+.++
T Consensus 491 nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 491 NVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998877664
No 30
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-71 Score=619.73 Aligned_cols=506 Identities=25% Similarity=0.329 Sum_probs=417.0
Q ss_pred HHHHHHHHHHHHh----h--hhcCCeeEEEECCe-EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCC
Q 003127 47 SDYKQSLQFKDLD----R--EKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 119 (845)
Q Consensus 47 ~~~~~~~~~~~l~----~--~~~~~~~~V~r~g~-~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGE 119 (845)
.+|.+.++..+.. + ...+.++.++.+|+ +++|+.+.+++||+|++.||++||+||++++|+ ++||||.+|||
T Consensus 354 gr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gs-s~VDEs~iTGE 432 (951)
T KOG0207|consen 354 GRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGS-SEVDESLITGE 432 (951)
T ss_pred HHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCc-eeechhhccCC
Confidence 4555555544432 1 34577899999996 899999999999999999999999999999997 59999999999
Q ss_pred CCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 120 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVM 199 (845)
Q Consensus 120 s~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 199 (845)
+.|++|+.++ .+.+||.+.+|.....++++|.||.+++|.+++++++..+.|+|+.+|+++.+++++++++++.++++|
T Consensus 433 s~PV~Kk~gs-~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w 511 (951)
T KOG0207|consen 433 SMPVPKKKGS-TVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVW 511 (951)
T ss_pred ceecccCCCC-eeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHH
Confidence 9999998766 499999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEE
Q 003127 200 VQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATS 279 (845)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~ 279 (845)
+....+... . .......+...|..++++++++|||+|.++.|++...+....+++|+++|..+.+|.+.++++
T Consensus 512 ~~~g~~~~~---~----~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~t 584 (951)
T KOG0207|consen 512 ILIGKIVFK---Y----PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKT 584 (951)
T ss_pred HHHcccccc---C----cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCE
Confidence 764332111 0 111114677788999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHH
Q 003127 280 ICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359 (845)
Q Consensus 280 i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 359 (845)
++||||||||+|+++|.++....+.. ...+.+.-.... +..+.||...|+
T Consensus 585 VvFDKTGTLT~G~~~V~~~~~~~~~~-----------------~~~e~l~~v~a~-------------Es~SeHPig~AI 634 (951)
T KOG0207|consen 585 VVFDKTGTLTEGKPTVVDFKSLSNPI-----------------SLKEALALVAAM-------------ESGSEHPIGKAI 634 (951)
T ss_pred EEEcCCCceecceEEEEEEEecCCcc-----------------cHHHHHHHHHHH-------------hcCCcCchHHHH
Confidence 99999999999999999987655421 111222111111 112679999999
Q ss_pred HHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHH
Q 003127 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 439 (845)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 439 (845)
+++|+...... .....+....|..+... +-+...+++ .+-|.-+- +.+++...+ +.+
T Consensus 635 v~yak~~~~~~----~~~~~~~~~~~pg~g~~--~~~~~~~~~---i~iGN~~~--------~~r~~~~~~------~~i 691 (951)
T KOG0207|consen 635 VDYAKEKLVEP----NPEGVLSFEYFPGEGIY--VTVTVDGNE---VLIGNKEW--------MSRNGCSIP------DDI 691 (951)
T ss_pred HHHHHhccccc----CccccceeecccCCCcc--cceEEeeeE---EeechHHH--------HHhcCCCCc------hhH
Confidence 99999876211 11112222233332222 112221222 33355433 333444332 347
Q ss_pred HHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q 003127 440 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 519 (845)
Q Consensus 440 ~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 519 (845)
++.+++....|..+.+++ -|.+++|++.++|++|+++..+|+.||+.|++++|+|||+..+|++
T Consensus 692 ~~~~~~~e~~g~tvv~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~s 755 (951)
T KOG0207|consen 692 LDALTESERKGQTVVYVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARS 755 (951)
T ss_pred HHhhhhHhhcCceEEEEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHH
Confidence 778888888998888777 4678999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 520 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 520 ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
+|+++|+.. |+++..|+||.+.++.+|++ +..|+|+|||.||.|+|.+||+|
T Consensus 756 vA~~VGi~~---------------------------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 756 VAQQVGIDN---------------------------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVG 807 (951)
T ss_pred HHHhhCcce---------------------------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccc
Confidence 999999764 99999999999999999999 89999999999999999999999
Q ss_pred EEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 600 Iamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
|||| .|++.|.++||+++.+|++.++..++..+|++..|++.|+.|++.||++.+.+..
T Consensus 808 Iaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 808 IAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred eeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 9999 8899999999999999999999999999999999999999999999999887765
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.8e-69 Score=619.34 Aligned_cols=460 Identities=28% Similarity=0.394 Sum_probs=382.8
Q ss_pred hcCCeeEEEEC-CeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEe
Q 003127 62 KKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN 140 (845)
Q Consensus 62 ~~~~~~~V~r~-g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~ 140 (845)
..+.+++++|+ |++++++.++|+|||+|.+++||+|||||++++|+ +.||||.|||||.|+.|..++ .+|+||.+.+
T Consensus 88 ~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~-~~vdes~lTGEs~pv~k~~gd-~V~aGt~~~~ 165 (562)
T TIGR01511 88 LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE-SEVDESLVTGESLPVPKKVGD-PVIAGTVNGT 165 (562)
T ss_pred cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc-eEEehHhhcCCCCcEEcCCCC-EEEeeeEECC
Confidence 45678888885 67799999999999999999999999999999997 699999999999999998766 5999999999
Q ss_pred ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCC
Q 003127 141 GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220 (845)
Q Consensus 141 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (845)
|+++++|+++|.+|.+||+.+.+.+++.+++++++..+++++++++.+++++++++++|.
T Consensus 166 g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 166 GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 999999999999999999999999988889999999999999999988888877766532
Q ss_pred hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEE
Q 003127 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300 (845)
Q Consensus 221 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 300 (845)
..+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+|+++|++|||||||||+|+|++.++..
T Consensus 226 -----~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~ 300 (562)
T TIGR01511 226 -----FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHV 300 (562)
T ss_pred -----HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec
Confidence 245668999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred cCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceE
Q 003127 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIV 380 (845)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l 380 (845)
.+.. . ..+.+..+...+ ..+.||.++|+++++++.+..... ....
T Consensus 301 ~~~~----------------~--~~~~l~~aa~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~----~~~~ 345 (562)
T TIGR01511 301 FGDR----------------D--RTELLALAAALE-------------AGSEHPLAKAIVSYAKEKGITLVE----VSDF 345 (562)
T ss_pred CCCC----------------C--HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCcCC----CCCe
Confidence 3321 0 112222222211 125699999999999877643211 1111
Q ss_pred EEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 381 KVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 381 ~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
+.+| .+.+.. ..++. -+..|+++.+.+ ++.. ++ ++.++|.+++.++
T Consensus 346 ~~~~----g~Gi~~--~~~g~---~~~iG~~~~~~~--------~~~~--~~------------~~~~~g~~~~~~~--- 391 (562)
T TIGR01511 346 KAIP----GIGVEG--TVEGT---KIQLGNEKLLGE--------NAIK--ID------------GKAEQGSTSVLVA--- 391 (562)
T ss_pred EEEC----CceEEE--EECCE---EEEEECHHHHHh--------CCCC--CC------------hhhhCCCEEEEEE---
Confidence 1111 122222 22221 234577765432 1111 11 1235677666554
Q ss_pred cCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 461 IGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 461 i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
.|.+++|.+.++|+++|+++++|++|++.|++++|+|||+..++.++++++|+.
T Consensus 392 -------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------- 445 (562)
T TIGR01511 392 -------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------- 445 (562)
T ss_pred -------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------
Confidence 467899999999999999999999999999999999999999999999999994
Q ss_pred cCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 541 ~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
++++..|++|.++++.++++ ++.++|+|||.||++|+++||+||+|| ++++.+++.||+++.+
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~ 508 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMR 508 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeC
Confidence 56778999999999999988 899999999999999999999999999 8899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 621 DNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 621 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
++++.+.++++.||++++++++|+.|++.+|++.+.+.+.
T Consensus 509 ~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 509 NDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998876653
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=9.7e-68 Score=637.82 Aligned_cols=474 Identities=26% Similarity=0.370 Sum_probs=398.0
Q ss_pred hcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEec
Q 003127 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNG 141 (845)
Q Consensus 62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g 141 (845)
..+.+++|+|||++++|+.++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|..++ .+|+||.+.+|
T Consensus 320 l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd-~V~aGt~~~~G 397 (834)
T PRK10671 320 LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGD-SVHAGTVVQDG 397 (834)
T ss_pred cCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCC-EEEecceecce
Confidence 4577899999999999999999999999999999999999999996 699999999999999998766 59999999999
Q ss_pred eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCh
Q 003127 142 SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 221 (845)
Q Consensus 142 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (845)
.++++|+++|.+|.++|+.+++++++..++++|+..++++.++++++++++++++++|... +. .
T Consensus 398 ~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~ 461 (834)
T PRK10671 398 SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------A 461 (834)
T ss_pred eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------c
Confidence 9999999999999999999999998888899999999999999999988888887765421 10 0
Q ss_pred HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEc
Q 003127 222 LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301 (845)
Q Consensus 222 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 301 (845)
..+...+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+++++|++|||||||||+|+|+|.++...
T Consensus 462 ~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 462 PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 02455677899999999999999999999999999999999999999999999999999999999999999999887643
Q ss_pred CeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEE
Q 003127 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVK 381 (845)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~ 381 (845)
+.. . ..+.+..+...+. .+.||.++|+++++...... .
T Consensus 542 ~~~----------------~--~~~~l~~a~~~e~-------------~s~hp~a~Ai~~~~~~~~~~-----------~ 579 (834)
T PRK10671 542 NGV----------------D--EAQALRLAAALEQ-------------GSSHPLARAILDKAGDMTLP-----------Q 579 (834)
T ss_pred CCC----------------C--HHHHHHHHHHHhC-------------CCCCHHHHHHHHHHhhCCCC-----------C
Confidence 211 0 1222322322222 15799999999987643211 0
Q ss_pred EecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeec
Q 003127 382 VEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI 461 (845)
Q Consensus 382 ~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i 461 (845)
..+|+....+ ++-... ++. .+..|+++.+.+. + +. ++.+.+..+++.++|.+++.+++
T Consensus 580 ~~~~~~~~g~-Gv~~~~-~g~--~~~~G~~~~~~~~--------~----~~---~~~~~~~~~~~~~~g~~~v~va~--- 637 (834)
T PRK10671 580 VNGFRTLRGL-GVSGEA-EGH--ALLLGNQALLNEQ--------Q----VD---TKALEAEITAQASQGATPVLLAV--- 637 (834)
T ss_pred cccceEecce-EEEEEE-CCE--EEEEeCHHHHHHc--------C----CC---hHHHHHHHHHHHhCCCeEEEEEE---
Confidence 1123222211 111112 222 2456998866331 1 11 12355667788889999888874
Q ss_pred CCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 003127 462 GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541 (845)
Q Consensus 462 ~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~ 541 (845)
|..++|.+.++|+++|+++++|++|++.|++++|+|||+..++.++++++|+..
T Consensus 638 -------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------- 691 (834)
T PRK10671 638 -------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------- 691 (834)
T ss_pred -------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 446899999999999999999999999999999999999999999999999964
Q ss_pred CCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC
Q 003127 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 621 (845)
Q Consensus 542 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~ 621 (845)
++++..|++|.++++.++.+ ++.|+|+|||.||++|+++||+||||| ++++.++++||+++.++
T Consensus 692 --------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 692 --------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRH 755 (834)
T ss_pred --------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecC
Confidence 78899999999999999988 899999999999999999999999999 89999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 622 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 622 ~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
+++++.++++.||+.+.++++|+.|++.||++.+.+..
T Consensus 756 ~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 756 SLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887664
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-58 Score=482.56 Aligned_cols=525 Identities=26% Similarity=0.382 Sum_probs=399.8
Q ss_pred HHHHHHHHHHHHHHhhccc---CCCCCchhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhcCCeeEEEEC-Ce
Q 003127 3 LMILAVCALVSLVVGIATE---GWPKGAHDGLGIVMSILLVVFV----TATSDYKQSLQFKDLDREKKKITVQVARN-GF 74 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~ 74 (845)
+++.+++++++.++.+.+. .....+.....+.+.+.+.+++ +++.|.+.+.+...+++......++++++ |.
T Consensus 35 MFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~ 114 (681)
T COG2216 35 MFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGS 114 (681)
T ss_pred EEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3445556666654333221 1111233333333333444433 34455555555566665444556677776 89
Q ss_pred EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEEee
Q 003127 75 RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTVGM 152 (845)
Q Consensus 75 ~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~tG~ 152 (845)
++.+++.+|+.||+|.++.||.||+||.+++|. .+||||++||||.|+.|+.+++ -+-.||.+.+.+.+.++++...
T Consensus 115 ~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~-asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG 193 (681)
T COG2216 115 IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPG 193 (681)
T ss_pred eeeccccccccCCEEEEecCCCccCCCeEEeee-eecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCC
Confidence 999999999999999999999999999999997 5999999999999999987743 2889999999999999999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|.+.|+..+++.++.++||.+..++-+..-+..+ +.+.+.-+ +-+..+..+. .-.....+
T Consensus 194 ~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTli---FL~~~~Tl----~p~a~y~~g~------------~~~i~~Li 254 (681)
T COG2216 194 ETFLDRMIALVEGAERQKTPNEIALTILLSGLTLI---FLLAVATL----YPFAIYSGGG------------AASVTVLV 254 (681)
T ss_pred ccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHH---HHHHHHhh----hhHHHHcCCC------------CcCHHHHH
Confidence 99999999999999999999886655432222111 11111110 1011111010 01134467
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
+++++.+|-.+.-.++.-=..++.|+.+-|++.++.+++|.+|.+|++..|||||+|-|+-.-.+++..+...
T Consensus 255 ALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~------- 327 (681)
T COG2216 255 ALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS------- 327 (681)
T ss_pred HHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCC-------
Confidence 8889999998887777766778999999999999999999999999999999999999987776665443321
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceE
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM 392 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~ 392 (845)
.+.+..+...++- +...|..+.+++.+++.+.+........ .....||+.+.|++
T Consensus 328 ------------~~~la~aa~lsSl------------~DeTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmS 382 (681)
T COG2216 328 ------------EEELADAAQLASL------------ADETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMS 382 (681)
T ss_pred ------------HHHHHHHHHHhhh------------ccCCCCcccHHHHHHHhccCCCcccccc-cceeeecceecccc
Confidence 2223333333321 1346888999999999986644332221 34678999998888
Q ss_pred EEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCC
Q 003127 393 GVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 472 (845)
Q Consensus 393 sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~ 472 (845)
++-.. ++ +-+-|||.+.+....+. .+...| +.+++..++-++.|-..++++
T Consensus 383 Gvd~~--~~--~~irKGA~dai~~~v~~----~~g~~p------~~l~~~~~~vs~~GGTPL~V~--------------- 433 (681)
T COG2216 383 GVDLP--GG--REIRKGAVDAIRRYVRE----RGGHIP------EDLDAAVDEVSRLGGTPLVVV--------------- 433 (681)
T ss_pred cccCC--CC--ceeecccHHHHHHHHHh----cCCCCC------HHHHHHHHHHHhcCCCceEEE---------------
Confidence 87643 22 55679999999876542 333223 457788899999998888877
Q ss_pred CCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 473 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 473 e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
.|.+++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..+|++.|++.
T Consensus 434 -~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------ 488 (681)
T COG2216 434 -ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------ 488 (681)
T ss_pred -ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------
Confidence 4678999999999999999999999999999999999999999999999999986
Q ss_pred CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 553 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 553 ~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..++++||+|.+.++.-|.+ |+-|+|+|||.||+|+|.+||||+||. +|+..||+++++|=.|.|...+.+.++.
T Consensus 489 ---fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~I 563 (681)
T COG2216 489 ---FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEI 563 (681)
T ss_pred ---hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhh
Confidence 77999999999999999999 999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHH
Q 003127 633 GRSVYI 638 (845)
Q Consensus 633 gR~~~~ 638 (845)
|+...-
T Consensus 564 GKqlLi 569 (681)
T COG2216 564 GKQLLI 569 (681)
T ss_pred hhhhee
Confidence 987653
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.4e-33 Score=291.55 Aligned_cols=223 Identities=33% Similarity=0.540 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecc
Q 003127 35 MSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 114 (845)
Q Consensus 35 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes 114 (845)
+.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.+++||++||||++++...++||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~s 83 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDES 83 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEECH
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccccc
Confidence 33444455566666666666666655444444999999999999999999999999999999999999999335899999
Q ss_pred cCCCCCCcccccC----CCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHH
Q 003127 115 SLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLF 190 (845)
Q Consensus 115 ~LtGEs~p~~k~~----~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 190 (845)
.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+...+++.+++++++.++++..++.+++++
T Consensus 84 ~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
T PF00122_consen 84 ALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILA 163 (230)
T ss_dssp HHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccc
Confidence 9999999999971 467899999999999999999999999999999999888888899999999999999888877
Q ss_pred HHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchh
Q 003127 191 FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAA 270 (845)
Q Consensus 191 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~ 270 (845)
++++++++++.. +...++...+..++++++.+||++||+++++++..+.++|.++|+++|++++
T Consensus 164 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 164 IAILVFIIWFFN----------------DSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHCHTG----------------STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred cchhhhccceec----------------ccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 777666442211 0111455677888999999999999999999999999999999999999999
Q ss_pred hhh
Q 003127 271 CET 273 (845)
Q Consensus 271 ~e~ 273 (845)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 995
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.87 E-value=6.3e-22 Score=196.47 Aligned_cols=175 Identities=34% Similarity=0.556 Sum_probs=140.0
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 746 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (845)
|.|+++.|++|+|++.|.+|+++++.|++++++|+|||+++++++++++++..++.++++++++.+..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999998888777665544444221
Q ss_pred C---CccchhhhHHHHHHHHHHHhccccccccccccccc--CCchhHHHHHHHHHHHHHHHHH--HHHhhhcccccCCCh
Q 003127 747 P---DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK--GILKNYVFVAVLTCTVLFQIII--IELLGTFANTTPLNL 819 (845)
Q Consensus 747 ~---~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~--v~~~~~~f~~~~l~~ 819 (845)
. .....++|++|.+++++|+++.+++|+. +.+.|+ +.++|++++.+++.++++++++ +|+++.+|++.|+++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~-~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSR-RRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSS-SSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 1 0123589999999999999999999963 345555 7779999999999998887654 566899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 003127 820 QQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 820 ~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
.+|+++++.+++.++++|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999985
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.86 E-value=1e-18 Score=187.78 Aligned_cols=290 Identities=14% Similarity=0.167 Sum_probs=212.4
Q ss_pred CcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCC------------------------
Q 003127 409 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 464 (845)
Q Consensus 409 Ga~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~------------------------ 464 (845)
|-.+.+.+.|+.+|+ +....|++..++++..+...+-...|+ ++++|||+..-.
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 666778999999996 556789999999999999888888885 999999975321
Q ss_pred ----------CC------------------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH
Q 003127 465 ----------FS------------------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 516 (845)
Q Consensus 465 ----------~~------------------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t 516 (845)
++ +..+....+.+|+|++..+.+.+++....|+.|.++.||++..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 00022344678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeC------------------------------------cccccCCHHH--------------
Q 003127 517 AKAIARECGILTDNGIAIEG------------------------------------PEFREKSDEE-------------- 546 (845)
Q Consensus 517 a~~ia~~lgi~~~~~~~i~g------------------------------------~~~~~~~~~~-------------- 546 (845)
.+-+|+++|+...++.-++- .+...+..|+
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765422211 0000000000
Q ss_pred ---------Hhhh-----------------cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCH--HHHHhCCe
Q 003127 547 ---------LSKL-----------------IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA--PALHEADI 598 (845)
Q Consensus 547 ---------~~~~-----------------~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~--~ml~~A~v 598 (845)
..++ ..-+..|..++|+.-.++++.+|++ |++++.+|...|-- -.+.+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 0000 0012368889999999999999998 99999999998843 34578999
Q ss_pred eEEeCCCCc-------------HHHH-----------------hccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 599 GLAMGIAGT-------------EVAK-----------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 648 (845)
Q Consensus 599 gIamg~~~~-------------~~ak-----------------~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 648 (845)
+||+..--. -... -++|+.......-.+..+|+.+|+....+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 998742000 0011 1234444444455677888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhh-hccCCCCccccc
Q 003127 649 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA-LATEPPNGDLMK 701 (845)
Q Consensus 649 ~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~-l~~~~~~~~~~~ 701 (845)
+..+...+++++..++..|..++..+++|.+++...+..+. +...++.+.+|.
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ 1148 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIII 1148 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEE
Confidence 99999999999999999999999999999998766444433 223444444444
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.85 E-value=1.8e-21 Score=199.10 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=90.9
Q ss_pred ceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCe
Q 003127 475 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 554 (845)
Q Consensus 475 ~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 554 (845)
+..++|.+.+.|+++++++++|+.|+++|++++|+|||+..++.++++++|+.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 688999999999999999999999999999999999999999999999999953 2
Q ss_pred eEEEEe--ChhcH--HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 555 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 555 ~v~~~~--~p~~K--~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
.++++. +|++| .++++.++.+ ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 9999999966 569999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.59 E-value=9.3e-15 Score=126.68 Aligned_cols=125 Identities=23% Similarity=0.360 Sum_probs=108.2
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
....+.++--.++-++++++|+.|++. ++++++|||...+....|+..|++.. +
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------r 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------R 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------e
Confidence 456788888889999999999999999 99999999999999999999998754 3
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe-CC-CCcHHHHhccCEEeccCChhHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam-g~-~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
+++...|+.|.++++.|+++ ++.+.|+|||.||.+||+.||+||+. ++ +..+.+..+||+++.+ ...+.++
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 88999999999999999987 89999999999999999999999985 32 3344577899999866 4444444
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.58 E-value=1.7e-14 Score=152.95 Aligned_cols=69 Identities=30% Similarity=0.358 Sum_probs=63.8
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++|||.||++||+.||+|+||+ ||.+.+|++||+|+.+++.+|+.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 579999999998877 57899999999999999999999999 9999999999999999999999998854
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.54 E-value=3.8e-14 Score=150.28 Aligned_cols=145 Identities=18% Similarity=0.234 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-ee--eCcccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~-~i--~g~~~~------------------ 540 (845)
..+.+.++++|++++++|++++++|||+...+..+.+++|+..+ ++. +. .+..+.
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 36999999999999999999999999999999999999998632 110 10 000000
Q ss_pred ----------------cC-----------------------------------CHHH-------HhhhcC-CeeE-----
Q 003127 541 ----------------EK-----------------------------------SDEE-------LSKLIP-KIQV----- 556 (845)
Q Consensus 541 ----------------~~-----------------------------------~~~~-------~~~~~~-~~~v----- 556 (845)
.. ..++ +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 0000 000000 0111
Q ss_pred -EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE--EeccCChhHHHH
Q 003127 557 -MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVT 628 (845)
Q Consensus 557 -~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~--v~~~~~~~~i~~ 628 (845)
+....| .+|+..++.+.+++| +.++++|||.||++||+.||+||||| ||.+.+|++||+ ++.+++.+|+.+
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 111222 479999999998877 57899999999999999999999999 999999999996 778899999999
Q ss_pred HHH
Q 003127 629 VAK 631 (845)
Q Consensus 629 ~i~ 631 (845)
+|+
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 885
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.52 E-value=7.7e-14 Score=147.50 Aligned_cols=146 Identities=21% Similarity=0.253 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-ee--eCcccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~-~i--~g~~~~------------------ 540 (845)
.++.+.+.++|++++++|++++++|||++..+..+.+++|+..+ ++. +. +|..+.
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 35999999999999999999999999999999999999997632 211 11 010000
Q ss_pred -----------------cCC------------------------------------HHH-------HhhhcC-CeeE---
Q 003127 541 -----------------EKS------------------------------------DEE-------LSKLIP-KIQV--- 556 (845)
Q Consensus 541 -----------------~~~------------------------------------~~~-------~~~~~~-~~~v--- 556 (845)
... .++ +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 000 000 000000 0111
Q ss_pred ---EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC--EEeccCChhHH
Q 003127 557 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTI 626 (845)
Q Consensus 557 ---~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad--~v~~~~~~~~i 626 (845)
+....| .+|+..++.+.+++| +.|+++|||.||++||+.||+||||| ||.+.+|+.|| +++.+++.+|+
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGV 256 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAV 256 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHH
Confidence 011122 469999999998877 57999999999999999999999999 99999999988 78889999999
Q ss_pred HHHHHH
Q 003127 627 VTVAKW 632 (845)
Q Consensus 627 ~~~i~~ 632 (845)
.++|++
T Consensus 257 a~~l~~ 262 (266)
T PRK10976 257 PHYLRK 262 (266)
T ss_pred HHHHHH
Confidence 998853
No 42
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.51 E-value=5e-14 Score=121.09 Aligned_cols=86 Identities=40% Similarity=0.617 Sum_probs=71.3
Q ss_pred hcCCceEEecCCCce-EEcCCchHHHHHHHHHHcC--CChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCc
Q 003127 334 NNTGGEVVIGEGNKT-EILGTPTETAILEFGLLLG--GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 410 (845)
Q Consensus 334 ~~~~~~~~~~~~~~~-~~~~~p~e~al~~~~~~~~--~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa 410 (845)
+||++.+..+++... ...|+|+|.||++++.+.| .+....+..+++++.+||+|+||+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 577776655543332 3799999999999999994 467788889999999999999999999998 334577799999
Q ss_pred HHHHHHhchh
Q 003127 411 SEIILAACDK 420 (845)
Q Consensus 411 ~~~il~~~~~ 420 (845)
||.|+++|++
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999999975
No 43
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.51 E-value=8.4e-14 Score=146.99 Aligned_cols=152 Identities=30% Similarity=0.405 Sum_probs=111.2
Q ss_pred EEeeecCC-CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-cccc------------
Q 003127 480 GIVGIKDP-MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEFR------------ 540 (845)
Q Consensus 480 G~~~~~d~-l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g-~~~~------------ 540 (845)
|++.-.+. +++.++++|+++++.|++++++|||++..+..+.+++++..+ ++ .+... +.+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33443443 999999999999999999999999999999999999999742 11 00000 0000
Q ss_pred ---------------------------------------------------------cCCH---HHH----hhhcC-Cee
Q 003127 541 ---------------------------------------------------------EKSD---EEL----SKLIP-KIQ 555 (845)
Q Consensus 541 ---------------------------------------------------------~~~~---~~~----~~~~~-~~~ 555 (845)
.... ++. .+... ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 011 11111 111
Q ss_pred EEEEeC-------h--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 556 VMARSS-------P--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 556 v~~~~~-------p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
.+.+.. | .+|+..++.+.+++| +.|+++||+.||++||+.||.||||| |+.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 222222 2 679999999998777 35999999999999999999999999 8899999999999999999
Q ss_pred hHHHHHHHH
Q 003127 624 STIVTVAKW 632 (845)
Q Consensus 624 ~~i~~~i~~ 632 (845)
+|+.++|++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999865
No 44
>PLN02887 hydrolase family protein
Probab=99.48 E-value=2.1e-13 Score=155.44 Aligned_cols=69 Identities=32% Similarity=0.423 Sum_probs=63.3
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.|+++|||.||++||+.||+||||| ||.+.+|++||+|+.+++.+|+.++|++
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 468889999988877 57899999999999999999999999 9999999999999999999999998863
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.46 E-value=5.3e-13 Score=137.95 Aligned_cols=145 Identities=25% Similarity=0.312 Sum_probs=106.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee---CcccccCC---------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFREKS--------------- 543 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~---g~~~~~~~--------------- 543 (845)
++.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ++ .+.. +..+....
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999998632 21 1111 11110000
Q ss_pred --------------------------HHHHhhhc---C-CeeE-----EEEeCh--hcHHHHHHHHHhhcC---CEEEEE
Q 003127 544 --------------------------DEELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 583 (845)
Q Consensus 544 --------------------------~~~~~~~~---~-~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~ 583 (845)
.++..+.+ . ...+ +....| .+|+..++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00011100 0 0111 112222 459999999988766 568999
Q ss_pred cCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 584 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 584 GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
||+.||++|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 99999999999999999999 9999999999999999999999998853
No 46
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.44 E-value=5.9e-13 Score=139.56 Aligned_cols=145 Identities=28% Similarity=0.360 Sum_probs=106.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee--------------------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI-------------------------- 534 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~~i-------------------------- 534 (845)
..++.+++.+++++++++|++++++|||++..+..+.+++++..+ ++.++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 446889999999999999999999999999999999999998621 11000
Q ss_pred ---------eCccccc-C--------------------------------------CH-------HHHhhhcCCeeEEEE
Q 003127 535 ---------EGPEFRE-K--------------------------------------SD-------EELSKLIPKIQVMAR 559 (845)
Q Consensus 535 ---------~g~~~~~-~--------------------------------------~~-------~~~~~~~~~~~v~~~ 559 (845)
++..... . .. +++.+.......+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0 00 011111111111111
Q ss_pred ---------eChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 560 ---------SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 560 ---------~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
....+|+..++.+.+.+| +.++++||+.||.+||+.||.|+||+ |+++.+|+.||+++.+++.+|++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 223789999999998766 57899999999999999999999999 99999999999999988889998
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
No 47
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.42 E-value=8.3e-13 Score=134.76 Aligned_cols=144 Identities=24% Similarity=0.328 Sum_probs=105.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccCC--------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REKS-------------- 543 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g-~~~--~~~~-------------- 543 (845)
.++.+++.++|++|+++|++++++|||++..+..+++.+++..+ ++ .+... ..+ ....
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999998642 11 11111 000 0000
Q ss_pred ---------------------HHHHhhhcC--CeeE-----EEE--eChhcHHHHHHHHHhhcC---CEEEEEcCCccCH
Q 003127 544 ---------------------DEELSKLIP--KIQV-----MAR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDA 590 (845)
Q Consensus 544 ---------------------~~~~~~~~~--~~~v-----~~~--~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~ 590 (845)
.+.+.+.+. ...+ +.. ....+|+..++.+.+++| +.++++||+.||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000000000 0111 111 223689999999988766 3589999999999
Q ss_pred HHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 591 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 591 ~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.++|
T Consensus 177 ~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999 99999999999999989999988753
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.40 E-value=1.8e-12 Score=133.47 Aligned_cols=144 Identities=24% Similarity=0.310 Sum_probs=104.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---cc-c-cCCH------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---EF-R-EKSD------------ 544 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~---~~-~-~~~~------------ 544 (845)
.+.+.+.++|++++++|++++++|||++..+..+.+++|+..+ ++ .+.... .. . ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5889999999999999999999999999999999999996432 11 111111 00 0 0000
Q ss_pred ------------------------HHHhhhc---C-CeeE-----EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCC
Q 003127 545 ------------------------EELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 586 (845)
Q Consensus 545 ------------------------~~~~~~~---~-~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg 586 (845)
+...... . ...+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000000 0 0001 111222 589999999988766 579999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH----HHHHHH
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 631 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~----i~~~i~ 631 (845)
.||++|++.||+|+||+ |+.+.+|+.||+|+.+++.+| +.+.|+
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999999999999 776664
No 49
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.40 E-value=2.1e-12 Score=137.12 Aligned_cols=69 Identities=28% Similarity=0.365 Sum_probs=62.0
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 468888888887766 57999999999999999999999999 8899999999999999999999998853
No 50
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.27 E-value=2.1e-11 Score=128.13 Aligned_cols=144 Identities=30% Similarity=0.417 Sum_probs=104.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee--Ccccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE--GPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~--g~~~~------------------ 540 (845)
.++.+++.++|++++++|++++++|||++..+..+.+++|+..+ ++ .+.. ++.+.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999987632 11 0000 00000
Q ss_pred ----------------cC-------------------------------------CH---HHHhhhcC------CeeE--
Q 003127 541 ----------------EK-------------------------------------SD---EELSKLIP------KIQV-- 556 (845)
Q Consensus 541 ----------------~~-------------------------------------~~---~~~~~~~~------~~~v-- 556 (845)
.. .. +++.+.+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 00 00 00011111 1111
Q ss_pred ----EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 557 ----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 557 ----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
+....| .+|+..++.+.+.++ +.++++||+.||++|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~ 253 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVA 253 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchh
Confidence 111222 579999999998765 57999999999999999999999999 89999999999999999999988
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
++|
T Consensus 254 ~~l 256 (256)
T TIGR00099 254 LAL 256 (256)
T ss_pred hhC
Confidence 753
No 51
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.26 E-value=5.3e-11 Score=125.94 Aligned_cols=146 Identities=16% Similarity=0.111 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------cc--cCCHHHH---
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------FR--EKSDEEL--- 547 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-----~~~-~~i~g~~--------~~--~~~~~~~--- 547 (845)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.. .|+ .+..... +. .++.+..
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 467889999999999999999999999999999999999852 122 2221100 00 0000000
Q ss_pred ------------------------------------hhh----------------------cC--CeeE-----EEEeCh
Q 003127 548 ------------------------------------SKL----------------------IP--KIQV-----MARSSP 562 (845)
Q Consensus 548 ------------------------------------~~~----------------------~~--~~~v-----~~~~~p 562 (845)
.+. +. ...+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 000 00 0001 111222
Q ss_pred --hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-----HHhccCEEeccCChhHHHHH
Q 003127 563 --MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 563 --~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-----ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+|+..++.+.+++| +.|+++|||.||++||+.||+|||||++..+. .+..||+++...+.+|+.++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 578888888887644 57999999999999999999999999433232 45589999999999999998
Q ss_pred HHH
Q 003127 630 AKW 632 (845)
Q Consensus 630 i~~ 632 (845)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
No 52
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.22 E-value=8.1e-11 Score=125.78 Aligned_cols=128 Identities=20% Similarity=0.296 Sum_probs=101.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... .. ..+... +..+..+ +.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-n~lei~----------dg~ltg~v~g~iv~ 245 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-NELEIM----------DGKLTGNVLGDIVD 245 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-eEEEEE----------CCEEEeEecCccCC
Confidence 5899999999999999999999999998888999999998531 11 000000 0001111 23
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
...|.+.++.+.+++| +.++++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++.
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4679999999987766 6799999999999999999999999 789999999999999999999887664
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.21 E-value=1.3e-10 Score=121.85 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc--c------cc--cCCHHH------
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP--E------FR--EKSDEE------ 546 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~--~------~~--~~~~~~------ 546 (845)
..+.+.++|++|+++|++++++|||++..+..+.+++|+..+ ++ .+.... . +. .++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999997532 22 222211 0 00 011000
Q ss_pred -H--------------------------------h--------------------hhcC--CeeE-----EEEeC--hhc
Q 003127 547 -L--------------------------------S--------------------KLIP--KIQV-----MARSS--PMD 564 (845)
Q Consensus 547 -~--------------------------------~--------------------~~~~--~~~v-----~~~~~--p~~ 564 (845)
+ . +.+. ...+ +.... ..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 0 0000 0000 01111 257
Q ss_pred HHHHHHHHHhhcC-----CEEEEEcCCccCHHHHHhCCeeEEeCCCCc---HHHHhc--c-CEEeccCChhHHHHHHHH
Q 003127 565 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 565 K~~~v~~l~~~~g-----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~---~~ak~~--a-d~v~~~~~~~~i~~~i~~ 632 (845)
|+..++.+.++++ +.++++||+.||.+|++.||+||||+ |+. +.+|+. | ++++.+++.+|+.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 8888888887754 46999999999999999999999999 777 468886 4 599999999999998864
No 54
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.11 E-value=2.4e-10 Score=110.22 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=84.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 48999999999999999999999999999999963 222222 3334444444
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
++++ +.++++||+.||++|++.||+++||+ |+.+.+|+.|++++.+++.++.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHH
Confidence 4433 67999999999999999999999999 89999999999999777666543
No 55
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.09 E-value=6.9e-10 Score=106.31 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=87.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+|++|+++|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 8999999999999999999999999999999863 22211 346666666655
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH-HHHHHH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST-IVTVAK 631 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~-i~~~i~ 631 (845)
+++ +.++++||+.||++|++.|+++++|. ++.+..+..||+++.++.-++ ++++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 444 67999999999999999999999999 888899999999998776555 666553
No 56
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.07 E-value=8.8e-10 Score=110.32 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=97.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeC-cccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g-~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..--. ..+.+ ..+ ... . ...++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~------------tG~-~--~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV------------VGY-Q--LRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee------------ECe-e--ecCcc
Confidence 68999999999999985 999999999999999999999964211 11111 000 000 0 13567
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
.|...++.+++. +..+.++|||.||++|++.||+||++. +.+..+++||-.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999876 778889999999999999999999995 7777777777555445677777777554
No 57
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.06 E-value=1.1e-09 Score=115.96 Aligned_cols=147 Identities=19% Similarity=0.152 Sum_probs=102.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc----------------cccc--
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP----------------EFRE-- 541 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~----------------~~~~-- 541 (845)
++.+.+++.++|++|+++|++++++|||+...+..+.+++|+..+ ++ .+.... .+..
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELG 98 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcC
Confidence 346788899999999999999999999999999999999998642 11 122110 0000
Q ss_pred CCHHH-------H------------------------------hhh----cC----------------------CeeE--
Q 003127 542 KSDEE-------L------------------------------SKL----IP----------------------KIQV-- 556 (845)
Q Consensus 542 ~~~~~-------~------------------------------~~~----~~----------------------~~~v-- 556 (845)
++.+. + ... .. ...+
T Consensus 99 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 99 PPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEE
Confidence 00000 0 000 00 0000
Q ss_pred ---EEEeC-hhcHHHHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHH----hcc-CEEe--ccC
Q 003127 557 ---MARSS-PMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDD 621 (845)
Q Consensus 557 ---~~~~~-p~~K~~~v~~l~~~~g----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak----~~a-d~v~--~~~ 621 (845)
+.... +.+|+..++.+.+++| +.++++||+.||++|++.||+|+||+ ||.+.+| ++| +.+. .++
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~ 257 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAP 257 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCC
Confidence 00111 1278888888876543 78999999999999999999999999 9999988 666 6777 677
Q ss_pred ChhHHHHHHHH
Q 003127 622 NFSTIVTVAKW 632 (845)
Q Consensus 622 ~~~~i~~~i~~ 632 (845)
+.+|+.+++++
T Consensus 258 ~~~Gv~~~l~~ 268 (273)
T PRK00192 258 GPEGWAEAINK 268 (273)
T ss_pred CcHHHHHHHHH
Confidence 78999988853
No 58
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.00 E-value=1.3e-09 Score=98.80 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=89.7
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
-.|+.|++.|+++.++|||+...++.-++++|+.. +|-. ..+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 38999999999999999999999999999999974 3332 368988888888
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 625 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~ 625 (845)
++++ +.++++||..||.|+|++.|+++|+. ++.+..++.||+|+..+.-+|
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~G 146 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEG 146 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcch
Confidence 7755 68999999999999999999999999 899999999999998776555
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.00 E-value=1.6e-09 Score=108.86 Aligned_cols=123 Identities=26% Similarity=0.283 Sum_probs=92.9
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+++|++.+.++.++++|.+++++||-...-+.++++.+|++..-...+..++ . .+....+--.+..+.|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G---------~ltG~v~g~~~~~~~K 145 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G---------KLTGRVVGPICDGEGK 145 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C---------EEeceeeeeecCcchH
Confidence 57999999999999999999999999999999999999999864221111110 0 0000012223455789
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
...++.+.+.+| +.+.++|||.||.|||+.||.++|. |+.+..++.|+.....
T Consensus 146 ~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~--n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV--NPKPKLRALADVRIWP 201 (212)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe--CcCHHHHHHHHHhcCh
Confidence 999988887656 3588889999999999999999998 4677777777766544
No 60
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.97 E-value=4.1e-09 Score=109.23 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=62.0
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC----EEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad----~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||.+|++.+|+||+|+ |+.+.+|+.|| +++.+++.+|+.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 479999999988766 36888999999999999999999999 89999999999 88888889999998864
No 61
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.96 E-value=6.2e-09 Score=108.72 Aligned_cols=147 Identities=15% Similarity=0.155 Sum_probs=104.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCcee-eeCccccc-------C--------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-IEGPEFRE-------K-------------- 542 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~-i~g~~~~~-------~-------------- 542 (845)
.++..|.+.+++++++++|+.++++|||+..+++.+.+++++..+.-.+ -+|..+.. .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999986552111 01111100 0
Q ss_pred ----------------------------CH-------HHHhhhcC----CeeE-EE-----EeCh--hcHHHHHHHHHhh
Q 003127 543 ----------------------------SD-------EELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 575 (845)
Q Consensus 543 ----------------------------~~-------~~~~~~~~----~~~v-~~-----~~~p--~~K~~~v~~l~~~ 575 (845)
.. +++.+.+. +..+ .+ ...| ..|...++.+++.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00011110 1111 11 1222 6899999999887
Q ss_pred cC---CEEEEEcCCccCHHHHHh-CCeeEEeCCCCcHHHHhccC-------EEeccCChhHHHHHHHH
Q 003127 576 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 632 (845)
Q Consensus 576 ~g---~~v~~~GDg~ND~~ml~~-A~vgIamg~~~~~~ak~~ad-------~v~~~~~~~~i~~~i~~ 632 (845)
+| +.++++||+.||++|++. ++.|+||+ |+.+.+|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 66 678999999999999998 67999999 89998887654 77777788999988864
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.91 E-value=6.3e-09 Score=102.79 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=85.2
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.+++.|+++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999863 222 2345777777776
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTI 626 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i 626 (845)
+++| +.++++||+.||++|++.||++++++ ++.+..+..||+++..++-++.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCH
Confidence 6555 57999999999999999999999998 7888889999999975544443
No 63
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.90 E-value=7.1e-09 Score=106.18 Aligned_cols=128 Identities=21% Similarity=0.297 Sum_probs=95.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccccCCHHHHhhhcCCeeEEEE-eChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMAR-SSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i--~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~ 563 (845)
++.+++.+.++.|+++|++++++||.....+..+.+.+|+..-....+ .+..+. ..+... ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864211000 000000 000001 1223
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.|..+++.+.++.+ +.+.++||+.||++|.+.||++++++ +.+.++++||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777777766644 46888999999999999999999985 678889999999999887776653
No 64
>PLN02382 probable sucrose-phosphatase
Probab=98.84 E-value=2.2e-08 Score=111.31 Aligned_cols=145 Identities=19% Similarity=0.168 Sum_probs=99.2
Q ss_pred CCChhHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc-----------------------
Q 003127 487 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE----------------------- 541 (845)
Q Consensus 487 ~l~~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i-~g~~~~~----------------------- 541 (845)
++.+...+++ +++++.|+.++++|||++.....+.++.++..+...+. +|.++..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 4555556666 89999999999999999999999999999877642111 1111100
Q ss_pred ------C--------------------CH-------HHHhhhcC----CeeE------EEEeCh--hcHHHHHHHHHhhc
Q 003127 542 ------K--------------------SD-------EELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL 576 (845)
Q Consensus 542 ------~--------------------~~-------~~~~~~~~----~~~v------~~~~~p--~~K~~~v~~l~~~~ 576 (845)
. .. +.+.+.+. ++.+ +....| .+|+..++.+++++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0 00 00111110 1111 112233 57999999998886
Q ss_pred ---C---CEEEEEcCCccCHHHHHhCC-eeEEeCCCCcHHHHhcc--------CEEe-ccCChhHHHHHHHH
Q 003127 577 ---G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVII-LDDNFSTIVTVAKW 632 (845)
Q Consensus 577 ---g---~~v~~~GDg~ND~~ml~~A~-vgIamg~~~~~~ak~~a--------d~v~-~~~~~~~i~~~i~~ 632 (845)
| +.++++||+.||++||+.|| .||||| |+.+.+|+.+ +++. .+++.+|+.++|++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 4 57899999999999999999 799999 8999888743 4443 35678899988864
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.63 E-value=5.4e-08 Score=91.37 Aligned_cols=105 Identities=23% Similarity=0.373 Sum_probs=78.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~----~~i--~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.|+++|.+++||+.|.+++++||--..-+..++.++||+..+. +.. +|+-.... . --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd----------~--~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFD----------T--NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccc----------c--CCccc
Confidence 578999999999999999999999999999999999999986431 000 11100000 0 00012
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
....|++.++.+++.++ +.++|+|||.||++|+..|+.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 33579999999998655 68999999999999999988777655
No 66
>PRK08238 hypothetical protein; Validated
Probab=98.59 E-value=1.2e-05 Score=90.72 Aligned_cols=97 Identities=20% Similarity=0.263 Sum_probs=74.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
|++|++.+.+++++++|++++++|+.+...++.+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 134566676
Q ss_pred HHHHHHHhhcCC-EEEEEcCCccCHHHHHhCCeeEEeCCCCcH
Q 003127 567 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTE 608 (845)
Q Consensus 567 ~~v~~l~~~~g~-~v~~~GDg~ND~~ml~~A~vgIamg~~~~~ 608 (845)
..++.. +++ .+.++||+.||++|++.||-.++++ .+..
T Consensus 131 ~~l~~~---l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 131 AALVEA---FGERGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred HHHHHH---hCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 554432 232 3677899999999999999999997 4443
No 67
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.57 E-value=4e-07 Score=92.16 Aligned_cols=123 Identities=22% Similarity=0.299 Sum_probs=89.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEE--EeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~--~~~p 562 (845)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...- .....++.. +.. ...|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECcccccc
Confidence 4689999999999999 999999999999999999999986311 011111000 000 1246
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE-EeccCChhHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 630 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~-v~~~~~~~~i~~~i 630 (845)
..|...++.++.. ++.++++|||.||++|.+.||+|++.+ ...+.....+++ ++. ++..+.+.+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7888888988877 788999999999999999999999886 443334445565 443 366665544
No 68
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.56 E-value=2.8e-07 Score=94.18 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=39.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
.+...+++.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45667789999999999999999999999999999999999753
No 69
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.56 E-value=3.7e-07 Score=92.01 Aligned_cols=118 Identities=22% Similarity=0.235 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+..+++.+|+..--...+..++-... -+. .+....+..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------QPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--------ecc--eeeEEccccHH
Confidence 58999999999999999999999999999999999999975311111100000000 001 11223456787
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 615 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad 615 (845)
..++.+.+.++ +.++++||+.||++|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 78777766544 46899999999999999999999997 43444444444
No 70
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.55 E-value=5.8e-07 Score=92.14 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=37.0
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
..+.++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455999999999999999999999999999999999986
No 71
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.54 E-value=9.5e-07 Score=92.74 Aligned_cols=138 Identities=12% Similarity=0.228 Sum_probs=91.6
Q ss_pred CCChhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceee---eCcc-cccCC----------------
Q 003127 487 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGPE-FREKS---------------- 543 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~lgi~--~~~~~~i---~g~~-~~~~~---------------- 543 (845)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++. ..++..+ .+.. ...+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 677899999999998 79999999999999999988877642 2222111 0000 00000
Q ss_pred ------------------------HHHHhh-------hcCCee-----EEEEeCh--hcHHHHHHHHHhhcC---CEEEE
Q 003127 544 ------------------------DEELSK-------LIPKIQ-----VMARSSP--MDKHTLVKHLRTTLG---EVVAV 582 (845)
Q Consensus 544 ------------------------~~~~~~-------~~~~~~-----v~~~~~p--~~K~~~v~~l~~~~g---~~v~~ 582 (845)
.+.+.+ ...... -+....| .+|+..++.+.+++| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 010000 011111 1112223 689999999888766 57888
Q ss_pred EcCCccCHHHHHhC----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 583 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 583 ~GDg~ND~~ml~~A----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+||+.||.+|++.+ ++||+|| ++. ..|++.+.+ .+.+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999 664 347887754 667766653
No 72
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.36 E-value=2.8e-06 Score=87.53 Aligned_cols=44 Identities=7% Similarity=0.043 Sum_probs=40.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
++...+.++++|++|+++|+.++++|||.......+.+++|+..
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34577889999999999999999999999999999999999864
No 73
>PLN02954 phosphoserine phosphatase
Probab=98.35 E-value=4.8e-06 Score=85.51 Aligned_cols=128 Identities=24% Similarity=0.346 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE------e
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~------~ 560 (845)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...+ ++.. .+... . +..+... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~~-~~~~~-~--------~g~~~g~~~~~~~~ 151 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFAN-QILFG-D--------SGEYAGFDENEPTS 151 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEEe-EEEEc-C--------CCcEECccCCCccc
Confidence 47899999999999999999999999999999999999996311 1100 00000 0 0000000 1
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhC--CeeEEeCCCC-cHHHHhccCEEeccCChhHHHH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGLAMGIAG-TEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A--~vgIamg~~~-~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
....|...++.+.++++ +.++++||+.||+.|.+.+ +++++.|... .+.....+|+++.+ +..+.+
T Consensus 152 ~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred CCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 12457788888776645 5788999999999998884 5555545211 23345568998854 555544
No 74
>PTZ00174 phosphomannomutase; Provisional
Probab=98.32 E-value=2.1e-06 Score=89.37 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=43.7
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhC-CeeEEeCCCCcHHHHhccCEE
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 617 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~A-~vgIamg~~~~~~ak~~ad~v 617 (845)
.+|+..++.|.++ .+.|+++|| |.||++||+.| -.|++++ |+.|.+|..|.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 6799999999988 678999999 99999999965 4556667 8888888877654
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.30 E-value=3.8e-06 Score=85.87 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=95.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
..++-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.++... ..+.+|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 44688999999999999999999999999999999999999986543333322211 11234555
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC---eeEEeCCC-CcHHHHhccCEEeccCChhHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~---vgIamg~~-~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
...+++.+... .+.++||||+.+|+.|-++|| +|+..|.+ ..+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 66666666655 468999999999999999999 77777743 334566779999965 66666544
No 76
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.30 E-value=3e-06 Score=96.89 Aligned_cols=48 Identities=8% Similarity=0.100 Sum_probs=40.8
Q ss_pred EEeeecC-CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 480 GIVGIKD-PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 480 G~~~~~d-~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
|++.-.+ ...+.+.++|++++++|++++++|||+...+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5444433 35678899999999999999999999999999999999974
No 77
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.29 E-value=6.9e-06 Score=83.62 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhcCCeeEE---EE
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM---AR 559 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~v~---~~ 559 (845)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +....++..+.... +.-..+ .+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 36899999999999999999999999999999999988754321 11222222211000 000000 01
Q ss_pred eChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHH--hccCEEeccCChhHHHHHHH
Q 003127 560 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK--ESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak--~~ad~v~~~~~~~~i~~~i~ 631 (845)
+ ...|..+++.++.. ++.++++|||.||++|.+.||+.+|=+ .-.+..+ ..+.+.. +++..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 24699999998876 677899999999999999999987644 2112111 1122222 45777766653
No 78
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.24 E-value=4.5e-06 Score=86.61 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=50.1
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-----HHhcc---C-EEeccCChhHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESA---D-VIILDDNFSTIVTVA 630 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-----ak~~a---d-~v~~~~~~~~i~~~i 630 (845)
.+|...++.++++++ +.|+++||+.||.+||..++.||.+| |+.++ ..+.. . +....+.-.||.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 689999999999876 46777899999999999999999999 77776 22222 2 556666777888877
Q ss_pred HH
Q 003127 631 KW 632 (845)
Q Consensus 631 ~~ 632 (845)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 79
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.21 E-value=8.7e-06 Score=83.71 Aligned_cols=128 Identities=23% Similarity=0.332 Sum_probs=87.6
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.+.++.|+++|++++++||..........+.+|+...-..++.+++.. .....|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP----------------NKKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC----------------CCCcChHHH
Confidence 4578999999999999999999999999999999999999864322222222110 001122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC--CC-CcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG--IA-GTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg--~~-~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..+++.++.. .+.++++||+.||+.+.+.||+ +|.+. .+ ..+.....+++++. ++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 3444444433 4678999999999999999999 55543 11 22334557888884 48888777654
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.19 E-value=5.8e-06 Score=83.43 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=77.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE-EEeChh
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSPM 563 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~ 563 (845)
..++.+++.+.++.++++|++++++||.....+..+++.+|+..- +.. ++....+..+. .+ +. ..+..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~----~~~-~l~~~~~g~~~---g~--~~~~~~~g~ 154 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA----IGT-RLEESEDGIYT---GN--IDGNNCKGE 154 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce----Eec-ceEEcCCCEEe---CC--ccCCCCCCh
Confidence 346899999999999999999999999999999999999998631 111 00000000000 00 00 113456
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.|...++.+.++.+ +.+.++||+.+|++|++.||.++++.
T Consensus 155 ~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 155 GKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 78887877765434 36888999999999999999999886
No 81
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.13 E-value=5.9e-06 Score=77.07 Aligned_cols=113 Identities=20% Similarity=0.145 Sum_probs=73.4
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
-..++.+++.+.+++|+++|++++++||+....+....+.+|+......++......................+.+..++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999985332223322111100000000000111122234445
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
.+..+.+.+... .+.++++||+.+|++|.+.++
T Consensus 101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 555666665544 467899999999999999843
No 82
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.12 E-value=1.4e-05 Score=81.73 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhcCCeeE--EEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--MARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~----~~~i~g~~~~~~~~~~~~~~~~~~~v--~~~~ 560 (845)
+++|++.+.++.|+++|+++.++||-....+..+.+.+ +.... ....+|+.+... .+.-.. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~--------kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT--------WPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe--------ccCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 011122211100 000000 0000
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
....|..+++.++.. ++.+.++|||.||++|.+.||+.++
T Consensus 145 ~~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 145 CGCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 013488899888776 6678999999999999999999775
No 83
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.12 E-value=1.1e-05 Score=81.43 Aligned_cols=116 Identities=23% Similarity=0.415 Sum_probs=78.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee-e-Cccc-cc--C-----------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--LTDNGIAI-E-GPEF-RE--K----------------- 542 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i-~-g~~~-~~--~----------------- 542 (845)
++.+.+.+++++|++.|++++++|||....+..+.++++. ...++..+ . +... .. .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 5889999999999999999999999999999999988542 22222111 1 1000 00 0
Q ss_pred -----------------------C----HH---HHhhhc-------CCeeEEE------EeCh--hcHHHHHHHHHhhcC
Q 003127 543 -----------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 577 (845)
Q Consensus 543 -----------------------~----~~---~~~~~~-------~~~~v~~------~~~p--~~K~~~v~~l~~~~g 577 (845)
. .+ .+...+ ....+.. ...| .+|...++.+.++++
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00 000000 1122221 1223 789999999988765
Q ss_pred ---CEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 578 ---EVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 578 ---~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
+.++++||+.||.+|++.+|+||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.11 E-value=1.3e-05 Score=81.05 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.+++|+++|+++.++|+.+...+....+.+|+...-..++..++. ...+.+|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999986422222221110 00111222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCC-CCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa---mg~-~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.++-. .+.++++||+.+|+.+-++||+... -|. ...+..+..+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 334444332 3679999999999999999999653 221 2222356779998854 66665443
No 85
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.10 E-value=8.2e-06 Score=81.48 Aligned_cols=92 Identities=27% Similarity=0.311 Sum_probs=68.1
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh-c--HH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 566 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~--K~ 566 (845)
+++.+.|+.++++|++++++||.....+.++++.+|+...+ ++.... .... +.....+.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~-~~~~---------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNEL-FDNG---------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEE-ECTT---------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEee-eecc---------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 111111 0000 11233444443 4 99
Q ss_pred HHHHHH------HhhcCCEEEEEcCCccCHHHHH
Q 003127 567 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 594 (845)
Q Consensus 567 ~~v~~l------~~~~g~~v~~~GDg~ND~~ml~ 594 (845)
..++.+ +.. ...+.++|||.||++|+|
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 223 578999999999999996
No 86
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.09 E-value=8.7e-06 Score=80.16 Aligned_cols=102 Identities=24% Similarity=0.273 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++++++.+.++.+++.|++++++||.....+..+++.+|+..--...+... .+..+. .+..--....+..|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~-----~~g~~~---g~~~~~~~~~~~~K~ 144 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFD-----DNGLLT---GPIEGQVNPEGECKG 144 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEEC-----CCCEEe---CccCCcccCCcchHH
Confidence 367999999999999999999999999999999999999863111000000 000000 000000123457899
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhC
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A 596 (845)
..++.+++..+ +.+.++|||.||++|++.|
T Consensus 145 ~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99988776533 4688999999999999876
No 87
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.04 E-value=1.3e-05 Score=79.85 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=77.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-eChhc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMD 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~ 564 (845)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..+++.+...+- ...+.-...+...+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 368899999999999999999999999999999999999986432233332221110 0000000001001111 11235
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
|..+++.++....+.++++|||.||++|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 8999999887535678899999999999999987654
No 88
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.89 E-value=6e-05 Score=76.76 Aligned_cols=125 Identities=18% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++..++.. ..+..|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 478999999999999999999999999999999999999875322232222110 0112233333
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa---mg~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
++++.+... .+.++++||+.+|+.+-++||+-.. -|....+. ....+|+++.+ +..+.+.+
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 444444333 3678899999999999999998533 23112222 34468888754 77776654
No 89
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.87 E-value=8e-05 Score=78.68 Aligned_cols=126 Identities=17% Similarity=0.244 Sum_probs=82.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.++++.|+++|++++++|+.+...+..+.+..|+......++.+++.. ..+..|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~----------------~~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLP----------------QKKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCC----------------CCCCCcHHH
Confidence 3678999999999999999999999999999999999888864322222221110 001111112
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeC--CCCcH-HHHhccCEEeccCChhHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMG--IAGTE-VAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg--~~~~~-~ak~~ad~v~~~~~~~~i~~~i 630 (845)
..+++.+.-. .+.++++||+.||+.|.+.||+. +++. .+..+ ..+..+|+++.+ +..+.+++
T Consensus 164 ~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~--l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD--LRALLPGC 229 (272)
T ss_pred HHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC--HHHHHHHH
Confidence 2333333222 36789999999999999999973 4443 11222 244578998844 66666544
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.86 E-value=5.4e-05 Score=77.03 Aligned_cols=122 Identities=17% Similarity=0.239 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-..++.+++.. ..+..|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLA----------------QRKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCC----------------CCCCChHHHH
Confidence 578999999999999999999999999999999999999864322222221110 0011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCCCc-HHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGT-EVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-m--g~~~~-~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+.+.+... .+.++++||+.+|+.+.++||+... + |.... +.....||+++.+ +..+.
T Consensus 149 ~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 149 LAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 333333332 3678899999999999999998765 3 21111 2233568888854 55544
No 91
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.86 E-value=0.0001 Score=89.04 Aligned_cols=138 Identities=17% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCChhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceeee--CcccccC-------------------
Q 003127 487 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGI--LTDNGIAIE--GPEFREK------------------- 542 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i~--g~~~~~~------------------- 542 (845)
.+.+++.+++++|.+ .|+.|+++|||+..........+++ ...++..+. +..+...
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 477899999999999 5999999999999999887765553 222222211 1110000
Q ss_pred ----------------------CH-------HHHh----hhcC--Cee-------EEEEeChhcHHHHHHHHHhhcC-CE
Q 003127 543 ----------------------SD-------EELS----KLIP--KIQ-------VMARSSPMDKHTLVKHLRTTLG-EV 579 (845)
Q Consensus 543 ----------------------~~-------~~~~----~~~~--~~~-------v~~~~~p~~K~~~v~~l~~~~g-~~ 579 (845)
+. +++. ..+. ... +-.+....+|+..++.+.+..+ +.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0011 1111 111 1112223689999999987533 68
Q ss_pred EEEEcCCccCHHHHHhC---CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 580 VAVTGDGTNDAPALHEA---DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 580 v~~~GDg~ND~~ml~~A---~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
++++||+.||.+|++.+ +++|+|| ++ +.+|++.+.+ .+.+.+.++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC--HHHHHHHHH
Confidence 99999999999999986 7999999 53 5678999976 355666554
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.72 E-value=0.00012 Score=75.09 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
-++.|++.++++.|+++|+++.++|+........+.+.+|+...-..++.+++.. ...| +
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKP--H 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCC--C
Confidence 3678999999999999999999999999999999999999875433333222110 1112 1
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCc---HHHHhccCEEeccCChhHHH
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~---~~ak~~ad~v~~~~~~~~i~ 627 (845)
..+.+...+.+| +.++++||+.||+++-+.||+....-..+. +.-...||+++.+ +..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 223333333334 678999999999999999998765431221 1223457777744 55543
No 93
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.67 E-value=0.00024 Score=73.15 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+...-..++.+++.. ..+.+|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999988888889998865332333322110 0122333334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCC-CcH-HHHhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIA-GTE-VAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-m--g~~-~~~-~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+++.+.-. .+.++++||+.||+.|-+.||+... + |.. ..+ .....+|+++.+ +..+.+.
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~ 223 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNP 223 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHH
Confidence 555555544 4779999999999999999998753 2 211 111 224568998855 6665544
No 94
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.61 E-value=0.00046 Score=72.70 Aligned_cols=119 Identities=17% Similarity=0.249 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++.+++ . ..|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~-~~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------I-LSKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------C-CCCH
Confidence 5789999999999999999999999999999999999998653222222211 0 1122
Q ss_pred HHHHHHHhhc---CCEEEEEcCCccCHHHHHhCCeeEEe---CCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~---g~~v~~~GDg~ND~~ml~~A~vgIam---g~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
.....+.++. .+.++++||+.+|+.+-++||+-... |.+..+. ....+|+++.+ +..+.+.+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 3333333222 35799999999999999999987542 3122222 34568998854 77776654
No 95
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.57 E-value=0.00041 Score=72.32 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-..++.+++.. ..+..|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 467899999999999999999999999999999999999875433444443321 0122334344
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCC--cH-HHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG--TE-VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~--~~-~ak~~ad~v~~~ 620 (845)
.+.+.+... .+.++++||+.+|+.+-++||+-...-..+ .+ .....+|+++.+
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 555555443 467899999999999999999864421122 12 223468888865
No 96
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.57 E-value=0.00041 Score=72.55 Aligned_cols=122 Identities=12% Similarity=0.157 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+...-..++.+++.. ..+..|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999875444444443321 0122233233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCcHHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+++.+.-. .+.++++||+.+|+.+-+.||+-.. +...........+|+++.+ ++.+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 444444433 3678999999999999999998542 2212222223457888755 55443
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.56 E-value=0.00039 Score=70.22 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=74.1
Q ss_pred CCChhHHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~-~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+.|++.+.|+ .++++|++++++|+-....++.+++..++.... .++ +.+++.... ....-..|..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i-~t~le~~~g--------g~~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLI-ASQIERGNG--------GWVLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEE-EEEeEEeCC--------ceEcCccCCChHH
Confidence 46899999996 788899999999999999999999997653322 122 222221000 0001123566889
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+-++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88776543221234556799999999999999999985
No 98
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.55 E-value=0.00036 Score=71.34 Aligned_cols=124 Identities=23% Similarity=0.253 Sum_probs=82.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~--~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.++.+++.+.++.|+++|+++.++|+.....+....+.+|+. ..-..++...+.. ..+.+|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHH
Confidence 368999999999999999999999999999999999999986 4333333332211 0112222
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE--eCCCCc---HH-HHhccCEEeccCChhHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA--MGIAGT---EV-AKESADVIILDDNFSTIVT 628 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa--mg~~~~---~~-ak~~ad~v~~~~~~~~i~~ 628 (845)
-=...++.+.....+.++++||+.+|+.+-+.||+..+ +. .+. +. ....+|+++.+ +..+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~~ 217 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLPA 217 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHHH
Confidence 22333333332102579999999999999999999862 32 222 22 23457877744 555543
No 99
>PRK11590 hypothetical protein; Provisional
Probab=97.55 E-value=0.0007 Score=68.67 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=73.8
Q ss_pred CCChhHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.| +.+++.|++++++|+....-+..+++.+|+.... .++ +.+++. .......-..|..++|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~--------~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQR--------RYGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEE--------EEccEECCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 222 222211 0000001123566889
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+-++..-........+-||+.||.|||+.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777553221344556699999999999999999985
No 100
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.54 E-value=0.0015 Score=67.83 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..++..+++..-.-.. +..+.. .+.-.+ ...+|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~-dGvltG-~~~P~i----~~~~K 193 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE-DGVLKG-FKGPLI----HTFNK 193 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC-CCeEeC-CCCCcc----ccccc
Confidence 368999999999999999999999999999999999999997554333221110000 000000 000001 11456
Q ss_pred HHHHH-HHHhhcC-----CEEEEEcCCccCHHHHHhC---Ce--eEEeCCCCcHH----HHhccCEEeccCChhHHHHHH
Q 003127 566 HTLVK-HLRTTLG-----EVVAVTGDGTNDAPALHEA---DI--GLAMGIAGTEV----AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 ~~~v~-~l~~~~g-----~~v~~~GDg~ND~~ml~~A---~v--gIamg~~~~~~----ak~~ad~v~~~~~~~~i~~~i 630 (845)
...+. ...+.++ ..++++|||.||++|..-. .. .|..=+...|. -+++-|+|+.+|.--.++..|
T Consensus 194 ~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 194 NHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 55443 2333222 5788999999999996533 11 22222122222 456789999887665665544
No 101
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.54 E-value=0.0004 Score=72.15 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=51.3
Q ss_pred EeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhC--------CeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 559 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 559 ~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A--------~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
+..+.+|+..++.+.+.++ ..++++||+.||.+|++.+ ++||+|+ .+ ..+..|++++.+ .+.+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHHH
Confidence 3445689999998887755 4689999999999999998 5889885 33 246678998864 66666
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 655
No 102
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.52 E-value=0.0005 Score=65.82 Aligned_cols=105 Identities=17% Similarity=0.239 Sum_probs=68.8
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCccCCc-eeee-CcccccCCHHHHhhhcCCeeE
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---GILTDNG-IAIE-GPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~l---gi~~~~~-~~i~-g~~~~~~~~~~~~~~~~~~~v 556 (845)
++.+.+++++++++++++|++++++|||+...+. ...+++ |..-+.+ .+.. |........ .+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~----------e~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHR----------EV 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhc----------cc
Confidence 5788999999999999999999999999988874 555552 3211211 2222 211111110 02
Q ss_pred EEEeChhcHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCee
Q 003127 557 MARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~~----g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
..+..-+.|...++.+.+.+ ...++.+||+.+|+.+-+++|+.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22222234888888887743 25677889999999999988764
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.48 E-value=0.00058 Score=71.51 Aligned_cols=98 Identities=19% Similarity=0.178 Sum_probs=68.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++.+++.. ..+..|+-=
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~----------------~~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVP----------------AGRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCC----------------CCCCCHHHH
Confidence 46789999999999999999999999999999999999886531 2333332211 011223332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
...++.+.-.-.+.++++||+.+|+.+-+.||+..
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 33444443210356899999999999999999654
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.48 E-value=0.00067 Score=71.61 Aligned_cols=96 Identities=16% Similarity=0.095 Sum_probs=65.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|+++|+++.++||.....+..+.+..|+.... ..++.+++.. ..+..|+-=
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~----------------~~KP~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP----------------AGRPYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC----------------CCCCChHHH
Confidence 56789999999999999999999999999988888887765421 2222222110 011222222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
..+.+.+.-...+.+++|||+.+|+.+-+.||+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333333332112569999999999999999997
No 105
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.33 E-value=0.00054 Score=68.73 Aligned_cols=94 Identities=18% Similarity=0.079 Sum_probs=67.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
.+++.++..++++.|+++|+++.++||.+...+..+.+.+|+...-..++.+++. ..+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-----------------~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-----------------PPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCC-----------------CCCcCHHH
Confidence 3456677799999999999999999999999999999999987533333332221 11234444
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
-..+++.+... .+.++++||+.+|+.+-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 45555555544 46799999999999987764
No 106
>PRK11587 putative phosphatase; Provisional
Probab=97.31 E-value=0.0011 Score=67.57 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=76.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..++++++.. ..+..|+--.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cEEEEHHHhc----------------CCCCCcHHHH
Confidence 5789999999999999999999999988777777777777422 2232222110 0112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCcH-HHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~-~ak~~ad~v~~~ 620 (845)
...+.+.-. .+.++++||+.+|+.+-+.||+. |++. ++.. .....+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 444444433 47899999999999999999984 5554 3322 223457877654
No 107
>PLN02580 trehalose-phosphatase
Probab=97.26 E-value=0.0022 Score=69.71 Aligned_cols=64 Identities=22% Similarity=0.217 Sum_probs=50.3
Q ss_pred hcHHHHHHHHHhhcC---C-E--EEEEcCCccCHHHHHh-----CCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---E-V--VAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~-~--v~~~GDg~ND~~ml~~-----A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.++++ . . ++++||+.||.+||+. +|+||+|| ++.+. ..|++.+.+ .+.+...|+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 489999999988765 1 2 4789999999999996 69999999 66543 357888865 777777664
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.25 E-value=0.0016 Score=63.19 Aligned_cols=142 Identities=23% Similarity=0.290 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce----eeeCcccccC---------------CHHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI----AIEGPEFREK---------------SDEEL 547 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~----~i~g~~~~~~---------------~~~~~ 547 (845)
++-|++.++++.|++. ...+++|-.-.+-+.++|..+|+...+.. -++.....+. +.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5789999999999876 44555555666778899999999643210 0111111111 11111
Q ss_pred hhhcCCeeEEEEeCh---------------hcHHHHHHHHHhhcC--CEEEEEcCCccCHHHHHhCC-ee-EEeCCCCcH
Q 003127 548 SKLIPKIQVMARSSP---------------MDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-IG-LAMGIAGTE 608 (845)
Q Consensus 548 ~~~~~~~~v~~~~~p---------------~~K~~~v~~l~~~~g--~~v~~~GDg~ND~~ml~~A~-vg-Iamg~~~~~ 608 (845)
.+.+. .+|.|..| ..|.++++.+.+.-+ ...+++||+..|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11110 13445444 346666666665422 35688899999999999772 33 555668999
Q ss_pred HHHhccCEEeccCChhHHHHHHH
Q 003127 609 VAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 609 ~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
-+...||+.+.+.+......+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999988887777776653
No 109
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.18 E-value=0.001 Score=68.12 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=68.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-..++.+++.. ..+.+|+-=.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~----------------~~KP~p~~~~ 156 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG----------------YPKEDQRLWQ 156 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888888888888864322232222111 0011122112
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee--EEeC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAMG 603 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg--Iamg 603 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+. +++.
T Consensus 157 ~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 157 AVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 233333322 36799999999999999999996 3444
No 110
>PLN02423 phosphomannomutase
Probab=97.17 E-value=0.0022 Score=66.55 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=33.7
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHh-CCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~-A~vgIamg 603 (845)
.+|+..++.|+ . .+.++++|| |.||++||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999999 5 678899999 8999999996 66788774
No 111
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.16 E-value=0.0012 Score=67.39 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=63.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd----~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4555999999999999999999999 6779999999999975433333332211 0112
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
+|.. .+++. + .++++||+.||+.+-+.||+-
T Consensus 176 ~~~~---~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKTQ---WIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHHH---HHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 2332 33433 4 478999999999999999875
No 112
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.14 E-value=0.0025 Score=59.24 Aligned_cols=91 Identities=21% Similarity=0.232 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
.++.+++.+++++|+++|++++++|+.. ...+....+.+|+.... ....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-LYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-EEECC---------------------
Confidence 3678999999999999999999999998 77888889998885210 01100
Q ss_pred EEeChhcHHHHHHHHHhhc----CCEEEEEcC-CccCHHHHHhCCeeE
Q 003127 558 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIGL 600 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~----g~~v~~~GD-g~ND~~ml~~A~vgI 600 (845)
....| +..+.+.+.+++ .+.++++|| ..+|+.+-+.+|+--
T Consensus 82 ~~~KP--~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKP--KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCC--ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00112 233333333333 367999999 699999999998753
No 113
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.13 E-value=0.0016 Score=66.48 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|+++|++++++|+.+...+....+.+|+...-..++.+++.. ..+.+|+--.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG----------------VEKPHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888888899999865322333222211 0112222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgI 600 (845)
.+.+.+... .+.++++||+. +|+.+-++||+-.
T Consensus 158 ~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 158 AALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEE
Confidence 333333322 36799999998 9999999999843
No 114
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.12 E-value=0.0031 Score=68.74 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+..--..++.+++.. ...-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999875433344333211 0112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-HHhccCEEeccCChhHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-AKESADVIILDDNFSTI 626 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-ak~~ad~v~~~~~~~~i 626 (845)
..++.+.-. .+.++++||+.+|+.+-+.||+-...-.++.+. -...||+++.+ +..+
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 455555443 578999999999999999999865432132222 12358888754 5554
No 115
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.11 E-value=0.0024 Score=72.99 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++.+++.. ....|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~~-- 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSDL-- 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcHH--
Confidence 678999999999999999999999999999999999999875333344333211 0112321
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCC-CCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~-~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
+...+++.-.+.++++||+.+|+.+-+.||+- |++.. ...+.....+|+++.+ +..+.+.+..
T Consensus 391 -~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 455 (459)
T PRK06698 391 -VKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILST 455 (459)
T ss_pred -HHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHHH
Confidence 22222222136799999999999999999984 33331 1122223458898854 7777665543
No 116
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.07 E-value=0.0016 Score=65.33 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+...-..++..++.. ..+..|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR----------------AYKPAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999864322333222211 0111222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+-..
T Consensus 156 ~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 156 LALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 344444333 4678999999999999999998643
No 117
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.05 E-value=0.0018 Score=66.09 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~lgi~--~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
.+.+++++.++.+++.|+++.++|||. ..++..+.+..|+. .....++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 477889999999999999999999985 56889999989993 322222222210
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
...+|...+ ++. + .++++||..+|+.+-+.||+-.
T Consensus 173 ~K~~K~~~l---~~~-~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 GQYTKTQWL---KKK-N-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCHHHHH---Hhc-C-CeEEEcCCHHHHHHHHHcCCcE
Confidence 113454433 333 4 4788999999999999998754
No 118
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.05 E-value=0.0047 Score=74.94 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=86.4
Q ss_pred CCCChhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCccCCceeee--Cc-ccccC----------------
Q 003127 486 DPMRPGVKESVAIC-RSAGITVRMVTGDNINTAKAIARE---CGILTDNGIAIE--GP-EFREK---------------- 542 (845)
Q Consensus 486 d~l~~~~~~~I~~l-~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~~~~~~~i~--g~-~~~~~---------------- 542 (845)
..+.+++.+++++| ++.|+.|+++|||...+....... +++..+++..+. +. .+...
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~ 694 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVM 694 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHH
Confidence 36778999999997 788999999999999999888754 344444443221 11 00000
Q ss_pred --------------------------CH-------HHH----hhhcCC--ee-------EEEEeChhcHHHHHHHHHhh-
Q 003127 543 --------------------------SD-------EEL----SKLIPK--IQ-------VMARSSPMDKHTLVKHLRTT- 575 (845)
Q Consensus 543 --------------------------~~-------~~~----~~~~~~--~~-------v~~~~~p~~K~~~v~~l~~~- 575 (845)
+. +++ ...+.+ .. +-.+..-.+|+..++.+.+.
T Consensus 695 ~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~ 774 (854)
T PLN02205 695 QLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIM 774 (854)
T ss_pred HHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 00 000 000100 00 11122336799999988632
Q ss_pred --cC---CEEEEEcCCccCHHHHHhCC--------------eeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 576 --LG---EVVAVTGDGTNDAPALHEAD--------------IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 576 --~g---~~v~~~GDg~ND~~ml~~A~--------------vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.| +.++++||+.||.+|++.++ ++|.+| .+ ...|.+-+.+ .+.+.++++
T Consensus 775 ~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG-~~----~S~A~y~L~d--~~eV~~lL~ 842 (854)
T PLN02205 775 QERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG-QK----PSKAKYYLDD--TAEIVRLMQ 842 (854)
T ss_pred HhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC-CC----CccCeEecCC--HHHHHHHHH
Confidence 23 47899999999999999885 667777 33 3456777754 566766653
No 119
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.97 E-value=0.0056 Score=60.41 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=71.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++.|++.+++++|+++|+++.++|..+. .......+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3679999999999999999999998762 122233444554211 1111000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc--H-HHHhcc--CEEeccCChhH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--E-VAKESA--DVIILDDNFST 625 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~--~-~ak~~a--d~v~~~~~~~~ 625 (845)
+..-..+.+|+--..+++.+... .+.++++||+.+|+.+-+.||+..- +. .|. + .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00000122233334444444433 4789999999999999999997532 22 222 1 122335 777744 666
Q ss_pred HHHHH
Q 003127 626 IVTVA 630 (845)
Q Consensus 626 i~~~i 630 (845)
+.+.+
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66554
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.88 E-value=0.0015 Score=64.60 Aligned_cols=95 Identities=13% Similarity=0.179 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+++|+++.++|+... +....+.+|+...-..++.+.+.. ..+..|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5789999999999999999999998643 456778888864333333332211 0111222222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+-.
T Consensus 149 ~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 149 AAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCEE
Confidence 333333322 356889999999999999999854
No 121
>PRK09449 dUMP phosphatase; Provisional
Probab=96.88 E-value=0.0047 Score=63.31 Aligned_cols=125 Identities=13% Similarity=0.129 Sum_probs=77.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+ +|+++.++|......+....+.+|+...-..++.+++.. ..+.+|+-=.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~----------------~~KP~p~~~~ 157 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG----------------VAKPDVAIFD 157 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC----------------CCCCCHHHHH
Confidence 46799999999999 689999999999888888888898864322222221110 0011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEE-eCCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLA-MGIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa-mg~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.+.-...+.++++||+. +|+.+-+.||+-.. +...+.+. ....+|+++.+ +..+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 333333321125799999998 79999999998643 33122211 12247887754 66666544
No 122
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.85 E-value=0.0025 Score=68.65 Aligned_cols=109 Identities=14% Similarity=0.022 Sum_probs=76.8
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
..+++.+++.+.+++|++.|++++++||++...+..+.+.+|+.. .-..+ .|.+. . ...+... --.+..|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i-~~~~~----~---~~~~~~~-~~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL-IGRPP----D---MHFQREQ-GDKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh-hCCcc----h---hhhcccC-CCCCCcH
Confidence 467899999999999999999999999999999999999998864 21111 11110 0 0000000 0013456
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
+-+...++.+.....+.++|+||..+|+.+-+.||+-..
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 677777776644213789999999999999999998754
No 123
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.81 E-value=0.0036 Score=61.69 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=65.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|+++|++++++|+..... .....++|+...-..++.+++.. ..+.+|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999998877 66666688864332333222110 0111222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
.+.+.+... .+.++++||+..|+.+-+++|+-
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 444444433 47899999999999999999874
No 124
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.77 E-value=0.0042 Score=63.57 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|++. ++++++|+.....+....+++|+...-..++...+.. ..+..|+-=.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG----------------IQKPDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC----------------CCCCCHHHHH
Confidence 5789999999999999 9999999999999999999999865332333222110 0011222223
Q ss_pred HHHHHH-HhhcCCEEEEEcCCc-cCHHHHHhCCeeEE-eCC-CCcHHHHhccCEEeccCChhHHHH
Q 003127 567 TLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGLA-MGI-AGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 567 ~~v~~l-~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa-mg~-~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
..++.+ .-. .+.++++||+. +|+.+-+.+|+... ... ...+.....+++++.+ +..+..
T Consensus 160 ~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 160 YALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 344444 322 36799999998 89999999997432 221 1121223356677644 555443
No 125
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.76 E-value=0.0081 Score=58.35 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
.+.+.+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999987
No 126
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.76 E-value=0.0028 Score=61.67 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=70.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.+++.+.+++|+++|++++++|+.+........+.+|+...-..++..++... .+..|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~----------------~Kp~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS----------------RKPDPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS----------------STTSHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh----------------hhhHHHHH
Confidence 35789999999999999999999999999999999999998743223332222110 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
..+++.+.-. .+.++++||+..|+.+-+.||+.-
T Consensus 140 ~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 140 RRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence 3444444333 478999999999999999998753
No 127
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.74 E-value=0.0033 Score=59.23 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC----CccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS- 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lg----i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~- 561 (845)
.++|+-++.++.+++.+++++++|+....-...+.+.++ +... .+++.+..-..+. ....++...+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i--di~sn~~~ih~dg-------~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI--DIVSNNDYIHIDG-------QHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee--EEeecCceEcCCC-------ceeeecCCccc
Confidence 589999999999999999999999999888888888776 2210 1111111000000 0000111111
Q ss_pred -hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 562 -PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 562 -p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-.+|...++.+++. .+.+.++|||+.|+++-+.+|+-.|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 25799999999988 7889999999999999999998774
No 128
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.74 E-value=0.0052 Score=65.35 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=74.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCc-eeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-~~~-~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
++.|++.+.++.|++.|+++.++|+.+......+.+..+... .+. .++.+++.. ..+..|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 578999999999999999999999999888887776653211 110 111221100 01122222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
=..+++.+.-. .+.+++|||+.+|+.+-+.||+....-..+.. .....+|+++.+
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 34444444433 46799999999999999999987664323321 112458888754
No 129
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.73 E-value=0.0028 Score=62.66 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc-
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~- 564 (845)
-++.|++.+.++.|+++|+++.++|+. ..+....+.+|+...-..++.+++.. +..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------------------~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------------------EGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------------------CCCCChH
Confidence 368999999999999999999999998 66788888888864322222221110 112211
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 565 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 565 -K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
=..+.+.+... .+.++++||+.+|+.+-+.||+..
T Consensus 147 ~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 147 TFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeE
Confidence 12223332222 257889999999999999998853
No 130
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.70 E-value=0.0076 Score=58.50 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=72.8
Q ss_pred EEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 478 ~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
.....+-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+..... ...+...+. ..+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------------TVPMHSLFD-DRI 102 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------------cccHHHhce-eee
Confidence 44444445578899999999999999999999987 8889999999999851110 000000010 011
Q ss_pred EEEeChhcH--HHHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 557 MARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 557 ~~~~~p~~K--~~~v~~l~~~~-----g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+...+..| ..+.+.+.+.. .+.++++||+..|+.+-++||+-++.-
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 111111112 23445554321 368999999999999999999877543
No 131
>PLN02940 riboflavin kinase
Probab=96.70 E-value=0.0048 Score=68.44 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=75.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~-~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.+++|++.|+++.++|+.....+....+ ..|+...-..++.+++.. ..+..|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 677754333333332210 011222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc--HHHHhccCEEecc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--EVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~--~~ak~~ad~v~~~ 620 (845)
..+++.+.-. .+.++++||+.+|+.+-+.||+... +. .+. +.....+|.++.+
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 3444444333 4679999999999999999998744 33 322 2223446666543
No 132
>PRK06769 hypothetical protein; Validated
Probab=96.67 E-value=0.0053 Score=60.02 Aligned_cols=99 Identities=14% Similarity=0.002 Sum_probs=59.4
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 559 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~--------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~ 559 (845)
+-|++++++++|++.|+++.++|+.+.. ......+..|+.. .+.......+. .-..+
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~~------------~~~~K 93 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD---IYLCPHKHGDG------------CECRK 93 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE---EEECcCCCCCC------------CCCCC
Confidence 6799999999999999999999987631 2233344555532 11100000000 00011
Q ss_pred eChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 560 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
..|+-=.++++.+... .+.++++||+.+|+.+-++||+-...
T Consensus 94 P~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 94 PSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 2222223444444332 36799999999999999999987653
No 133
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.47 E-value=0.012 Score=57.83 Aligned_cols=124 Identities=18% Similarity=0.124 Sum_probs=64.7
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
+.|++.+++++|+++|+++.++|.-+. .....+..+.|+... .++.......... +. .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~~-~~----~ 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGVE-EF----R 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCcccc-cc----c
Confidence 578999999999999999999998763 111233333443311 1110000000000 00 0
Q ss_pred CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE--EeCCCCcH---HHHhccCEEecc
Q 003127 553 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILD 620 (845)
Q Consensus 553 ~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI--amg~~~~~---~ak~~ad~v~~~ 620 (845)
...-..+..|+-=..+.+.+.-. .+.++|+||..+|+.+-++||+.. .+. .|.. .....||+++.+
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 00000011222222333333322 367889999999999999999853 333 3332 122348888854
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.38 E-value=0.0081 Score=57.44 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
..+++.+.++.|+++|+++.++|+.....+....+.. +......++..++ +..+..|+-=..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 4478999999999999999999999999998888875 4322111211111 101112222233
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
+.+.+.-. . .++++||+.+|+.+-+.||
T Consensus 127 ~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 33333322 3 7899999999999988875
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.27 E-value=0.014 Score=55.41 Aligned_cols=98 Identities=24% Similarity=0.330 Sum_probs=61.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++.|++.++++.|+++|+++.++|..+. ..+....+.+|+.... ..........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCCC----------
Confidence 4689999999999999999999998762 4556677778875210 0100000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.... ..| +.++.+...++++ +.++++||...|+.+-+.+|+-..
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0000 122 2333333333334 679999999999999999988643
No 136
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.23 E-value=0.019 Score=57.91 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=59.8
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
+-|.-|++.+.++.+++.|++|+++|||+... +..-.++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 34778999999999999999999999999765 444455678764332333221000 0001
Q ss_pred hhcHHHHHHHHHhhcC-CEEEEEcCCccCH
Q 003127 562 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 590 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~ 590 (845)
.+-|...-+.+.+. | .+++.+||..+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 12277777777766 6 5788999999997
No 137
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.23 E-value=0.01 Score=59.76 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+-... .....+.+|+...-..++...+.. ..+.+|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~----------------~~KP~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG----------------AEKPDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 57799999999999999999999986654 567778888754222222211100 0011222122
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG 599 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vg 599 (845)
.+++.+... .+.+++|||+. +|+.+-++||+-
T Consensus 168 ~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGIS-PEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence 333333322 36799999997 899999999864
No 138
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.01 E-value=0.014 Score=56.89 Aligned_cols=87 Identities=21% Similarity=0.230 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--h
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 563 (845)
++.+++.+++++|++.|++++++|+.+ ...+..+.+.+|+.. ......| +
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p~ 95 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPGC 95 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCChH
Confidence 578999999999999999999999988 677777888887642 1111122 2
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa 601 (845)
-=..+++.+... .+.++++||.. .|+.+-+.||+-..
T Consensus 96 ~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 96 AFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred HHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEE
Confidence 112223332222 35799999998 79999999998543
No 139
>PLN03017 trehalose-phosphatase
Probab=95.92 E-value=0.092 Score=56.85 Aligned_cols=64 Identities=20% Similarity=0.255 Sum_probs=47.5
Q ss_pred hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhC-----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A-----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.+.++ ..++++||...|-.|++.. |+||.+| .... ...|++.+.+ .+.+.+.|+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~~k--~T~A~y~L~d--p~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KFPK--DTDASYSLQD--PSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999987654 2578999999999999855 5888888 3221 3568888854 777776663
No 140
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.89 E-value=0.016 Score=55.68 Aligned_cols=99 Identities=21% Similarity=0.184 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++-|++.+++++|+++|++++++|.. ....+..+.+.+|+.- . .++.+......
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d-~ii~~~~~~~~--------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-D-DVLICPHFPDD--------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-e-EEEECCCCCCC---------
Confidence 46789999999999999999999985 2446677778888751 1 11111000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
.... .. -|..+++.+.++++ +.+.++||+.+|+.+-+.||+....
T Consensus 98 ---~~~~-~K--P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ---NCDC-RK--PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ---CCCC-CC--CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0000 01 22334444433333 5699999999999999999987653
No 141
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.86 E-value=0.085 Score=55.17 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=38.8
Q ss_pred EEeeecCC----CChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCcc
Q 003127 480 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILT 528 (845)
Q Consensus 480 G~~~~~d~----l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~ 528 (845)
|++.-.++ +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555565 88999999999999999999999987664 555566678753
No 142
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.73 E-value=0.025 Score=52.14 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 525 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~lg 525 (845)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777777776
No 143
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.73 E-value=0.057 Score=56.19 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=60.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
..++-|++.+.++.+++.|+++.++|+|.... +....+..|+..... -.++.|..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 44578999999999999999999999998443 445667788854210 01333333
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHH
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 594 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~ 594 (845)
...|..-.+.+.+. -..++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 34566566666554 467999999999986543
No 144
>PLN02811 hydrolase
Probab=95.72 E-value=0.029 Score=57.27 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCc--ccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~-ia~~lgi~~~~~~~i~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.|++.+.|+.|++.|+++.++||-....... ..+..++......+++++ +.. ..+..|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 468999999999999999999999987654432 222223332211222222 100 0111222
Q ss_pred cHHHHHHHHH---hhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~---~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-=...++.+. -. .+.+++|||+..|+.+-+.||+...
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeEE
Confidence 2244444443 22 3679999999999999999998654
No 145
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.68 E-value=0.015 Score=55.23 Aligned_cols=96 Identities=15% Similarity=-0.047 Sum_probs=66.0
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+...- ..++.+++.. +..|.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe
Confidence 3367999999999998 57999999999999999999999875321 2233332211 11121
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
=.+.++.+... .+.++++||..+|+.+-+.+++-|.
T Consensus 104 -~~k~l~~l~~~-p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRD-LSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCC-hhcEEEEECCHHHhhcCccCEEEec
Confidence 11122333333 4789999999999999888877663
No 146
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.56 E-value=0.046 Score=68.56 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+-|++.+.++.|+++|+++.++|+.....+....+.+|+. ..-..++.+++.. ..+-.|+-=
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~----------------~~KP~Pe~~ 224 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFE----------------NLKPAPDIF 224 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccc----------------cCCCCHHHH
Confidence 35789999999999999999999999999999999999985 2222333332211 011222222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc---HHHHhccCEEeccCChhHHHHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT---EVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~---~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
..+++.+... .+.++++||..+|+.+-+.||+-.. +. .+. +.....+|+++.+-..-.+..++..|
T Consensus 225 ~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 225 LAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 3444444433 4679999999999999999998433 33 222 22345678888663333344444433
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.52 E-value=0.036 Score=53.68 Aligned_cols=94 Identities=9% Similarity=0.041 Sum_probs=58.7
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~------------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~---------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG---------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC----------------
Confidence 3489999999999999999999975542 4567788888743 122211110
Q ss_pred EEEEeChhcHHHHHHHHH--hhcCCEEEEEcCCc--------cCHHHHHhCCeeE
Q 003127 556 VMARSSPMDKHTLVKHLR--TTLGEVVAVTGDGT--------NDAPALHEADIGL 600 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~--~~~g~~v~~~GDg~--------ND~~ml~~A~vgI 600 (845)
......|+-=..+.+.+. -. .+.+++|||.. +|+.+-++||+-.
T Consensus 105 ~~~KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 LYRKPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCCCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111121223333332 12 25799999986 6999999998754
No 148
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.51 E-value=0.052 Score=55.06 Aligned_cols=99 Identities=11% Similarity=0.164 Sum_probs=66.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lg---i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
+-++.+++.+++++|+++|+++.++|..+......+.+..+ +..- +++ .+ +..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----f~~-------------~f-d~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----FSG-------------YF-DTTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----cce-------------EE-EeCcccCCC
Confidence 45789999999999999999999999998877777666552 2210 000 00 000111223
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
|+-=..+++.+.-. .+.++++||...|+.+-++||+-...
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 33334455555433 46799999999999999999997653
No 149
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.51 E-value=0.11 Score=53.77 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=62.4
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~--~ia~~lgi~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|.+.-..++-|++.+++++|+++|+++.++|........ ...+++|+.. ....+++..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~------------------- 77 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG------------------- 77 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-------------------
Confidence 556666788999999999999999999999986655444 5678888864 222222111
Q ss_pred EEEeChhcHHHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCe
Q 003127 557 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
......+.+.+++. .++.+.++||+.+|...+..++.
T Consensus 78 -----~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 78 -----EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 11112222222221 14679999999999998875543
No 150
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.45 E-value=0.04 Score=56.03 Aligned_cols=106 Identities=21% Similarity=0.270 Sum_probs=71.3
Q ss_pred CCChhHHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh-h
Q 003127 487 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP-M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l--~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~ 563 (845)
|+.|+.++.++.+ ++.|+.++++|--+..-...+.+.-|+...-..+++.+..-+... .+.-......-+.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G-~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG-RLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc-eEEEeCccCCCCCcCCCcc
Confidence 6789999999999 568999999999999999999999999765444444432111100 00000000012234443 4
Q ss_pred cHHHHHHHHHhhc---C---CEEEEEcCCccCHHHH
Q 003127 564 DKHTLVKHLRTTL---G---EVVAVTGDGTNDAPAL 593 (845)
Q Consensus 564 ~K~~~v~~l~~~~---g---~~v~~~GDg~ND~~ml 593 (845)
-|..+++.+++.. | +.|.++|||.||....
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 7999999888651 3 6899999999996543
No 151
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.16 E-value=0.064 Score=58.25 Aligned_cols=99 Identities=22% Similarity=0.168 Sum_probs=62.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
-++.|++.+.+++|+++|++++++|+- ....+..+.+..|+.. +..++......+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd~-------- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPEDN-------- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCccc--------
Confidence 367899999999999999999999983 2344566777777742 1111111000000
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..++ ..|..++..+.++++ +.+.|+||+.+|+.+-+.||+-..
T Consensus 100 -----~~~r---KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 -----CSCR---KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----CCCC---CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0011 123334433333322 679999999999999999998754
No 152
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=95.16 E-value=0.11 Score=49.01 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=70.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc-----CCccCCceeeeCc-cc-ccCCHHHHhhhcCCe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC-----GILTDNGIAIEGP-EF-REKSDEELSKLIPKI 554 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~l-----gi~~~~~~~i~g~-~~-~~~~~~~~~~~~~~~ 554 (845)
.|..++++.+..++++++|++++.+|+|+.-.+. ...++. ++. .+.++..+ .+ .....
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r---------- 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR---------- 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc----------
Confidence 4689999999999999999999999999965443 333333 332 22222211 11 00111
Q ss_pred eEEEEeChhcHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCee
Q 003127 555 QVMARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 555 ~v~~~~~p~~K~~~v~~l~~~~----g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
.+..+-..+.|...++.++..+ ....+.+|+..+|+.+-+++|+-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1444444578999999998763 35788889999999999988764
No 153
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.09 E-value=0.1 Score=48.95 Aligned_cols=86 Identities=20% Similarity=0.294 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
....|+.++=+..++++|++++++|..+...+...++.+|+.. ++--..|-.+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---------------------------i~~A~KP~~~ 97 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---------------------------IYRAKKPFGR 97 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---------------------------eecccCccHH
Confidence 4578999999999999999999999999999999999999974 3222233222
Q ss_pred --HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCee
Q 003127 566 --HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIG 599 (845)
Q Consensus 566 --~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vg 599 (845)
.+.++.++-. .+.|+|+||. ..|+-.=..||+-
T Consensus 98 ~fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 98 AFRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred HHHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcE
Confidence 3344444433 4789999998 4587776666654
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=95.07 E-value=0.029 Score=54.79 Aligned_cols=121 Identities=22% Similarity=0.257 Sum_probs=74.5
Q ss_pred CCChhHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-CCeeEEEEeCh-h
Q 003127 487 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMARSSP-M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~-~~~~v~~~~~p-~ 563 (845)
|+.|+..++|+.+++.|- .+.++|--|......+.+..|+..--..+.+.+...+..- .+.-.. ..-.-+.++.+ -
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G-~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG-RLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC-cEEeecCCCCCccCcCchhh
Confidence 678999999999999997 9999999999999999999988532111111111000000 000000 00012222222 3
Q ss_pred cHHHHHHHHHhhc---C---CEEEEEcCCccC-HHHHHhCCeeEEeCCCCcH
Q 003127 564 DKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTE 608 (845)
Q Consensus 564 ~K~~~v~~l~~~~---g---~~v~~~GDg~ND-~~ml~~A~vgIamg~~~~~ 608 (845)
-|+.++..++... | +.+..+|||.|| +|+++...--+||.-.|-+
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 4777777776541 1 378999999999 4677777777777544444
No 155
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=95.04 E-value=0.069 Score=57.90 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.+++.+++++|+++|+++.++|..+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 3578999999999999999999999999999999988 7765310 1112223
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
..|...++.+.+.+| +.++++||...|+.+.+.+...+.+-
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 456655555555444 78999999999999999998876543
No 156
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.00 E-value=0.028 Score=56.91 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=57.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t--a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
-++.|++.+.++.|+++|+++.++|...... ........++...-..++...+. -..+.+|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~----------------~~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLE----------------GLRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeec----------------CCCCCCHH
Confidence 3578999999999999999999999875432 22222233332211111111000 00111222
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-=..+++.+.-. .+.++++||...|+.+-++||+-..
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~i 193 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITTI 193 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 223333333322 3568888999999999999998543
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=94.87 E-value=0.025 Score=57.71 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=64.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.| ++++.++|+.+...+....+..|+...- ..++++.+.. ..+..|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~----------------~~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ----------------RWKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC----------------CCCCChHHH
Confidence 4668999999988 4999999999988888888888886432 1222222111 001122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
..+.+.+.-. .+.++++||+.+|+.+-++||+.+..
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 3334443322 36789999999999999999988764
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.63 E-value=0.055 Score=47.48 Aligned_cols=90 Identities=22% Similarity=0.303 Sum_probs=56.1
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++...+++-|++.++|++|+++|++++++|..+..+...++ +.+|+...... +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 555567788999999999999999999999988755544444 66777643211 2
Q ss_pred EEEeChhcHHHHHHHHHh-hcCCEEEEEcCCccCHHHHHhCCe
Q 003127 557 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~-~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
+. | =....+.+++ +.+..|.++|.. .....++.+|+
T Consensus 64 ~t---s--~~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 64 IT---S--GMAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EE---H--HHHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred EC---h--HHHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22 1 1223444444 236788888865 56667776654
No 159
>PRK10444 UMP phosphatase; Provisional
Probab=94.57 E-value=0.13 Score=53.39 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=41.4
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 527 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~ 527 (845)
|++.-.+++-|++.+++++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66666778999999999999999999999999998887777776 4664
No 160
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.56 E-value=0.082 Score=52.97 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=59.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+++++|+++|+++.++|.-+.......... .++...-..++...+.. ....+|+-=
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~----------------~~KP~p~~~ 147 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG----------------MRKPEARIY 147 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC----------------CCCCCHHHH
Confidence 4689999999999999999999999886655433222 23321111111111100 001112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..+++.+... .+.++++||+..|+.+-++||+...
T Consensus 148 ~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 148 QHVLQAEGFS-AADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 3333443333 3678999999999999999998654
No 161
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.25 E-value=0.21 Score=51.99 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=42.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 529 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~ 529 (845)
|++.-.+++-+++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 45555666677999999999999999999995 889998999999998754
No 162
>PLN02645 phosphoglycolate phosphatase
Probab=94.11 E-value=0.12 Score=55.68 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=61.9
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+...... +
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~-----------------------I 93 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE-----------------------I 93 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh-----------------------E
Confidence 666666778899999999999999999999999976666665 56777532111 2
Q ss_pred EEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 557 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
+... ......++......++.|.. +++..|...++.+|+-+.-
T Consensus 94 ~ts~--~~~~~~l~~~~~~~~~~V~v-iG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 94 FSSS--FAAAAYLKSINFPKDKKVYV-IGEEGILEELELAGFQYLG 136 (311)
T ss_pred eehH--HHHHHHHHhhccCCCCEEEE-EcCHHHHHHHHHCCCEEec
Confidence 2211 11222222211110244555 5567889999988876543
No 163
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.99 E-value=0.14 Score=50.56 Aligned_cols=98 Identities=10% Similarity=0.027 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.+++|+ .+++++|..+...+....+.+|+...-..++..++.... ....+.+|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD------------YLLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc------------cCCCCCCHHHHH
Confidence 46789999999997 479999999999999999999986432223322211100 000011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.+++.+... .+.++++||...|+.+=+.||+..
T Consensus 149 ~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 444444433 467889999999999999998764
No 164
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.96 E-value=0.1 Score=51.63 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHH
Q 003127 492 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 571 (845)
Q Consensus 492 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 571 (845)
..+.++.|++. +++.++|+.....+....+..|+...-..+++.++.. ..+..|+-=....+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~~~~ 154 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRCAQL 154 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHHHHH
Confidence 36899999875 8999999999999999999999865322333322211 011223333344444
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 572 LRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 572 l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
++.. .+.++++||..+|+.+-+.||+-.
T Consensus 155 ~~~~-~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 155 MGVQ-PTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred cCCC-HHHeEEEeccHhhHHHHHHCCCEE
Confidence 4433 356888999999999999999864
No 165
>PHA02597 30.2 hypothetical protein; Provisional
Probab=93.67 E-value=0.19 Score=50.24 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=60.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|++.+ +.+++|..+........+.+|+..-.. ..+ +..+.++... .|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 46899999999999985 566677755444444555666542100 000 0112222221 244
Q ss_pred HHHHHHHhhcC-CEEEEEcCCccCHHHHHhC--CeeEEeCCCCc
Q 003127 567 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGLAMGIAGT 607 (845)
Q Consensus 567 ~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A--~vgIamg~~~~ 607 (845)
.++....+++| +.++++||..+|+.+-++| |+-...-..+.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 55554444445 4588999999999999999 98654322443
No 166
>PLN02151 trehalose-phosphatase
Probab=93.42 E-value=0.76 Score=49.72 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=47.1
Q ss_pred hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhC-----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A-----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.+.++ ..++++||...|-.|++.. |+||-+| .+.. ...|++.+.+ .+.+.++|.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999987644 1378999999999999853 7788777 3322 2368898865 777776664
No 167
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=93.37 E-value=0.37 Score=46.79 Aligned_cols=52 Identities=21% Similarity=0.347 Sum_probs=43.4
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 527 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~ 527 (845)
+.+-|.+-++|..-|++.|++++|++++.+|..+|....++-+.+.++ +|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 346699999999999999999999999999999998877766666554 5664
No 168
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=93.35 E-value=0.31 Score=50.28 Aligned_cols=64 Identities=23% Similarity=0.293 Sum_probs=33.5
Q ss_pred EEEEeChhcHHHHHHHHHhhcCC------EEEEEcCCccCHHHHHhC------CeeEEeCCCCc-HHHHhccCEEecc
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGE------VVAVTGDGTNDAPALHEA------DIGLAMGIAGT-EVAKESADVIILD 620 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~------~v~~~GDg~ND~~ml~~A------~vgIamg~~~~-~~ak~~ad~v~~~ 620 (845)
+-.|..-..|+.+++.+.+..+. .++++||...|-.|++.. +++|-++ ... .....+|++-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 33444446699999999887553 688999999999999863 6788888 433 2344567776654
No 169
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=93.17 E-value=0.17 Score=51.60 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=78.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.+.++.|++.|+.+.+.|+.+...+..+.+.+|+...-..++++++.. -.+..|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHHH
Confidence 4688999999999999999999999999999999999999986543444333321 113455655
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
....+.|.-. ...++++.|+.|.+.+-++||.-+-.-
T Consensus 149 L~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v 185 (221)
T COG0637 149 LLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGV 185 (221)
T ss_pred HHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEe
Confidence 6667776544 577888899999999999999876543
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.04 E-value=0.17 Score=51.72 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=59.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.-|++.+.++.+++.|++|+++|||+.. .+..=.++.|....+..++.+..-..- ....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~----------------~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK----------------KSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS--------------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc----------------cccc
Confidence 355678999999999999999999999854 333345566765433333322211000 0012
Q ss_pred hcHHHHHHHHHhhcC-CEEEEEcCCccCHHH
Q 003127 563 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 592 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~m 592 (845)
+.|..-.+.+.++ | +.++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3478888888877 6 578899999999775
No 171
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.14 E-value=0.54 Score=45.14 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=68.2
Q ss_pred cCCCChhHHHHHHHHHHcCCE--EEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 485 KDPMRPGVKESVAICRSAGIT--VRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~--v~~~TGd-------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
++++.++..+.+++|++.+.. ++++|-. +...|..+.+.+|+.. .
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------l 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------L 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE--------------------------E
Confidence 677899999999999999874 9999987 4889999999999862 0
Q ss_pred EEEEeChhcHHHHHHHHHhh----cCCEEEEEcCC-ccCHHHHHhCC-eeE
Q 003127 556 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDG-TNDAPALHEAD-IGL 600 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~----~g~~v~~~GDg-~ND~~ml~~A~-vgI 600 (845)
.+....|....++.+.++.+ ..+.++++||- ..|+-|=...| .+|
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~ti 161 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTI 161 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEE
Confidence 12234676667888888654 14679999998 45777766665 444
No 172
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.10 E-value=0.84 Score=47.16 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=55.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
+.|.-|++.+..+.+++.|++|+++|||... |..++ ++.|......+++.+..-. -...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~----------------~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDN----------------SAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCC----------------ccch
Confidence 4567789999999999999999999999854 33333 3457754333333221000 0001
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 590 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~ 590 (845)
..+.|...-+.+.+. | ++++.+||..+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 113465555666656 6 5788999999996
No 173
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=91.90 E-value=0.42 Score=45.04 Aligned_cols=87 Identities=20% Similarity=0.291 Sum_probs=57.6
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
+++-+++.|..=++.|=+++.+|||... ++..+|+...|.+.+.....|+.- +...-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~-------------------k~~qy 175 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP-------------------KPGQY 175 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC-------------------Ccccc
Confidence 3445588888888999999999999864 456667777776654443333211 11112
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
+|. ..++++ +-.+.. ||+.||+.+-+.||+
T Consensus 176 ~Kt---~~i~~~-~~~IhY-GDSD~Di~AAkeaG~ 205 (237)
T COG3700 176 TKT---QWIQDK-NIRIHY-GDSDNDITAAKEAGA 205 (237)
T ss_pred ccc---HHHHhc-CceEEe-cCCchhhhHHHhcCc
Confidence 343 345555 545555 999999999999875
No 174
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=91.23 E-value=2.8 Score=43.56 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=76.7
Q ss_pred cCCCChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee---eCcccccCCHHH-----------H
Q 003127 485 KDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKSDEE-----------L 547 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i---~g~~~~~~~~~~-----------~ 547 (845)
...+.++..+++++|... ...++++|||+.........-.|+ ...++..+ +|.......++. +
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 456888999999999887 557999999999998887763333 33333222 332221111000 0
Q ss_pred ------------------------------------hhh------------cCCeeEEEEeChhcHHHHHHHHHhhcCC-
Q 003127 548 ------------------------------------SKL------------IPKIQVMARSSPMDKHTLVKHLRTTLGE- 578 (845)
Q Consensus 548 ------------------------------------~~~------------~~~~~v~~~~~p~~K~~~v~~l~~~~g~- 578 (845)
.+. ..+..|-+|.+-..|+.+++.+.+..+.
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~ 197 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD 197 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC
Confidence 000 0122355666667799999987776453
Q ss_pred --EEEEEcCCccCHHHHHhCC----eeEEeC
Q 003127 579 --VVAVTGDGTNDAPALHEAD----IGLAMG 603 (845)
Q Consensus 579 --~v~~~GDg~ND~~ml~~A~----vgIamg 603 (845)
.+.+.||...|-.|++..+ .+|-+|
T Consensus 198 ~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 198 GRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 4778899999999999886 455555
No 175
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=90.87 E-value=0.61 Score=48.67 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=45.2
Q ss_pred CC-hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 488 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 488 l~-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
+| |++.+++++|+++|++++++|+.....+....+++|+...-..++++.+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 45 999999999999999999999999999999999999986545566555543
No 176
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=90.27 E-value=0.74 Score=47.54 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=56.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--hc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~ 564 (845)
++-|++.++++.|++. +++.++|..+.. .+..|+...-..++..++. .+..| +-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4678999999999875 899999986653 2556664321122211111 01122 11
Q ss_pred HHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEeC
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMG 603 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIamg 603 (845)
=..+++.+.-. .+.+++|||+ ..|+.+-+.||+-.+..
T Consensus 169 ~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 169 YHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 12223333222 3679999999 59999999999876644
No 177
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.75 E-value=3.5 Score=43.68 Aligned_cols=93 Identities=20% Similarity=0.227 Sum_probs=58.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++.-.+++-+++.++|++|+++|++++++|+++..+.. .-.+++|+...... +
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~-----------------------i 67 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQ-----------------------L 67 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh-----------------------E
Confidence 455556777888999999999999999999997644333 34456777532111 2
Q ss_pred EEEeChhcHHHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 557 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
+. + -....+.|+++ .+..+.++|+. .....++.+|+-+.
T Consensus 68 ~t---s--~~~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 68 FS---S--ALCAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ec---H--HHHHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 21 1 11122334431 24678888975 45567777776653
No 178
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.29 E-value=2.3 Score=48.74 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=62.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE------e
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 560 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~------~ 560 (845)
+++++.+ .+++.|.+ +++|+-...-++.+|++ +|++. ++ |.+++... +-....+ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEECc---------CCEEeeeecCCCCC
Confidence 5555444 45567755 99999999999999987 89873 11 11111100 0011112 2
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 604 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~ 604 (845)
.-++|.+-++..... .....+.||+.||.|||+.||.+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 346687777643211 1122567999999999999999999983
No 179
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=87.39 E-value=1.5 Score=45.89 Aligned_cols=51 Identities=18% Similarity=0.079 Sum_probs=42.7
Q ss_pred ChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 003127 489 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539 (845)
Q Consensus 489 ~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~ 539 (845)
.|++.+++++|+++|+++.++|+.+...+....+.+|+...-..++.++..
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 399999999999999999999988888899999999997654455555443
No 180
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.10 E-value=1.9 Score=43.99 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=74.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 565 (845)
++.+++.++++++++. ++++++|--.........+++|+...-+.++...+ .....|..+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~------------------~g~~KP~~~~ 159 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISED------------------VGVAKPDPEI 159 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecc------------------cccCCCCcHH
Confidence 5778999999999999 99999999888889999999997654332222111 112233222
Q ss_pred -HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeE-EeCCCCc--HHHHhccCEEeccCChhHHHHHH
Q 003127 566 -HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL-AMGIAGT--EVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 -~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgI-amg~~~~--~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
..+.+.+.-. .+.++++||+ .||+..-+++|.-- -+...+. +......|+.+.+ +..+..++
T Consensus 160 f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 160 FEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 3334444333 4689999997 56757777777753 2331111 1112456666644 55555544
No 181
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=86.56 E-value=0.86 Score=41.59 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTA 517 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 517 (845)
+++.+++.+++++++++|++++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56889999999999999999999999987654
No 182
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=85.70 E-value=2.6 Score=48.51 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.4
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~------------~ta~~ia~~lgi~ 527 (845)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998654 3467778888874
No 183
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=84.41 E-value=3.7 Score=39.59 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=58.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcC-CCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTG-DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TG-d~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+-|+++++++.|++.|+++.++|- +.+.-|+.+.+.+++...+..... +. +.--+....|..|
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~-----------~~----~~F~~~eI~~gsK 109 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVP-----------LI----EYFDYLEIYPGSK 109 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-------------------------CCECEEEESSS-H
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccccc-----------ch----hhcchhheecCch
Confidence 4779999999999999999999994 778999999999999821110000 00 1112245567789
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..-.+.++++.| +.++++=|-.......++ +||.
T Consensus 110 ~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 110 TTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp HHHHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred HHHHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcE
Confidence 888888887755 567777777665565554 5554
No 184
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.84 E-value=7.4 Score=37.88 Aligned_cols=87 Identities=21% Similarity=0.200 Sum_probs=55.0
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCC-----HHHHHHH----------HHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDN-----INTAKAI----------ARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~-----~~ta~~i----------a~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
+.+++.+++++++++|++++|+|--+ +.+...+ .++.|..- .
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~i-----------------------d 88 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKI-----------------------D 88 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCcc-----------------------c
Confidence 67899999999999999999999632 2222222 11222110 0
Q ss_pred CeeEEEE--------eChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCee
Q 003127 553 KIQVMAR--------SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 553 ~~~v~~~--------~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vg 599 (845)
...+|. +..-..+.+.+.+++. + ....+|||...|+.+-..|+++
T Consensus 89 -~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 -GILYCPHHPEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred -eEEECCCCCCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 012222 2222345555555554 5 6788999999999999988876
No 185
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=81.46 E-value=1 Score=43.85 Aligned_cols=86 Identities=13% Similarity=0.110 Sum_probs=54.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++ ++.++|.-+........+.+|+...-..++++++.. ..+.+|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~----------------~~KP~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR----------------AYKPDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC----------------CCCCCHHHHH
Confidence 47789989888 378999999998998999999864222222222110 0112222224
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
.+.+.+... .+.+++|||+..|+.+-+++
T Consensus 147 ~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLP-PDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence 445555433 46799999999999876653
No 186
>PTZ00445 p36-lilke protein; Provisional
Probab=81.35 E-value=8.7 Score=38.17 Aligned_cols=152 Identities=11% Similarity=0.084 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhchhhhheeeecCCC-CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 436 VNHLNETIEKFASEALRTLCLACMEIGNE-FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 436 ~~~~~~~~~~~~~~G~r~l~~a~~~i~~~-~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
.+......+.+.+.|.|++++-...---. -+........+ ...+-..++|+.++-+++|+++||+++++|=-..
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~-----~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDND-----DIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcc-----hhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 34456677888999998876642100000 00000000000 0111224799999999999999999999997665
Q ss_pred HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE------------------EEeChhcHHHHHHHHHhhc
Q 003127 515 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM------------------ARSSPMDKHTLVKHLRTTL 576 (845)
Q Consensus 515 ~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~------------------~~~~p~~K~~~v~~l~~~~ 576 (845)
.... . ......|+|.++-+..-+.-..-..-..++ ....|+.|..-.+.+.+++
T Consensus 103 ~~~~---~-----~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~ 174 (219)
T PTZ00445 103 ELIP---S-----ENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDF 174 (219)
T ss_pred hhcc---c-----cCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHc
Confidence 4410 0 122244555543221110000000000011 1224455555445555554
Q ss_pred C---CEEEEEcCCccCHHHHHhCCeeE
Q 003127 577 G---EVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 577 g---~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
| +.++++=|....+.+-++.|+--
T Consensus 175 gl~peE~LFIDD~~~NVeaA~~lGi~a 201 (219)
T PTZ00445 175 NVNPDEILFIDDDMNNCKNALKEGYIA 201 (219)
T ss_pred CCCHHHeEeecCCHHHHHHHHHCCCEE
Confidence 5 67999999999999998877643
No 187
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=80.11 E-value=1.4 Score=42.45 Aligned_cols=94 Identities=12% Similarity=0.011 Sum_probs=62.3
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
+.=..||++.+.+++|.+. +++++.|......|..+.+.++..... ..++..+. ..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~----------------------~~ 95 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRES----------------------CV 95 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccc----------------------cE
Confidence 3346899999999999987 999999999999999999999864310 11111110 00
Q ss_pred hcHHHHHHHHH---hhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 563 MDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 563 ~~K~~~v~~l~---~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..|...++.|. .. .+.++++||...|..+-+.+++-|.
T Consensus 96 ~~~~~~~K~L~~l~~~-~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 96 FTNGKYVKDLSLVGKD-LSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EeCCCEEeEchhcCCC-hhhEEEEeCChhhhccCccCEeecC
Confidence 01111233333 22 3578999999998877776766553
No 188
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=78.02 E-value=12 Score=40.64 Aligned_cols=108 Identities=13% Similarity=0.094 Sum_probs=66.9
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-C-------CccCCceeeeCcccc----------cCCHHH--H
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-G-------ILTDNGIAIEGPEFR----------EKSDEE--L 547 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l-g-------i~~~~~~~i~g~~~~----------~~~~~~--~ 547 (845)
..|++.+.+++|+++|+++.++|+-+...+..+.+.+ | +..--+.++.++.-. ..+.+. +
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~ 264 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSL 264 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcc
Confidence 3689999999999999999999999999999999996 6 333333444443211 110000 0
Q ss_pred --hhh--cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHH-hCCee
Q 003127 548 --SKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALH-EADIG 599 (845)
Q Consensus 548 --~~~--~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~-~A~vg 599 (845)
... +.+..+++.= +-..+.+.+... ++.++++||. ..|+-.-+ .+|.-
T Consensus 265 ~~~~~~~l~~g~vY~gG---n~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~ 318 (343)
T TIGR02244 265 KWGEVDGLEPGKVYSGG---SLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWR 318 (343)
T ss_pred cCCccccccCCCeEeCC---CHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcE
Confidence 000 1111233322 223455555555 7899999998 45777665 66654
No 189
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=77.01 E-value=33 Score=42.11 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.8
Q ss_pred CChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q 003127 488 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECG 525 (845)
Q Consensus 488 l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lg 525 (845)
+.++..+++++|.+. +..|+++|||+..+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 677889999999765 78899999999999988876533
No 190
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=70.57 E-value=11 Score=38.69 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=72.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe----Ch
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS----SP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~----~p 562 (845)
.+|+++.+.++.|++.+|.+.++|+-=-.....+.++-|...++..+++..-.-+.+ -.+.+-. .+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~----------g~l~gF~~~lIH~ 159 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDED----------GVLVGFKGPLIHT 159 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TT----------SBEEEE-SS---T
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCc----------ceEeecCCCceEE
Confidence 589999999999999999999999999888899999989887776555432111000 0011101 11
Q ss_pred hcHHH-HH------HHHHhhcCCEEEEEcCCccCHHHHHhC---CeeEEeC--CCCcH----HHHhccCEEeccCChhHH
Q 003127 563 MDKHT-LV------KHLRTTLGEVVAVTGDGTNDAPALHEA---DIGLAMG--IAGTE----VAKESADVIILDDNFSTI 626 (845)
Q Consensus 563 ~~K~~-~v------~~l~~~~g~~v~~~GDg~ND~~ml~~A---~vgIamg--~~~~~----~ak~~ad~v~~~~~~~~i 626 (845)
-+|-. .+ +.++.+ ..|+..||+.-|+.|-.-. +.-+..| +...| .-+++-|+|+.+|.--.+
T Consensus 160 ~NKn~~~l~~~~~~~~~~~R--~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v 237 (246)
T PF05822_consen 160 FNKNESALEDSPYFKQLKKR--TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDV 237 (246)
T ss_dssp T-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HH
T ss_pred eeCCcccccCchHHHHhccC--CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchH
Confidence 23322 11 222222 4677789999999997655 2222222 11222 245678999988765555
Q ss_pred HHHH
Q 003127 627 VTVA 630 (845)
Q Consensus 627 ~~~i 630 (845)
+..|
T Consensus 238 ~~~i 241 (246)
T PF05822_consen 238 PNAI 241 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 191
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=66.15 E-value=7.4 Score=40.61 Aligned_cols=107 Identities=18% Similarity=0.253 Sum_probs=69.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l----gi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
|.+.-.+++=|++.++|++|+++|++++++|-.+..+...+++++ +++...+.
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~----------------------- 73 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD----------------------- 73 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH-----------------------
Confidence 888888999999999999999999999999988876666555443 33221111
Q ss_pred EEEEeChhcHHHHHHHHHhhc-CCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 556 VMARSSPMDKHTLVKHLRTTL-GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~-g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
++. + =....+.++++. +..|.++|. ..+.+.++.+|+-+.-..+. ...|+++..
T Consensus 74 i~T---S--~~at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~~~~~-----~~~d~Vv~g 128 (269)
T COG0647 74 IVT---S--GDATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVDEEEP-----ARVDAVVVG 128 (269)
T ss_pred eec---H--HHHHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEeccCCC-----CcccEEEEe
Confidence 221 1 112233344431 268999994 46778999888877543111 125776654
No 192
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=63.29 E-value=14 Score=38.06 Aligned_cols=49 Identities=18% Similarity=0.241 Sum_probs=38.2
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHH-cCCcc
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARE-CGILT 528 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~-lgi~~ 528 (845)
|++.-.+++-+++.++|+.++++|++++++| |++.........+ .|+..
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~ 59 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDV 59 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 4555556677899999999999999999998 7777766665555 77753
No 193
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=59.56 E-value=8.2 Score=39.84 Aligned_cols=97 Identities=14% Similarity=0.082 Sum_probs=51.6
Q ss_pred ChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHH
Q 003127 489 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 568 (845)
Q Consensus 489 ~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 568 (845)
-++..++++.+++.|++. ++|......+.......|... +. ..+...-.+.......+|+-=..+
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~----------~~----~~i~~~g~~~~~~gKP~~~~~~~~ 204 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY----------YA----ELIKQLGGKVIYSGKPYPAIFHKA 204 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH----------HH----HHHHHhCCcEecCCCCCHHHHHHH
Confidence 478889999999999997 778766544332222222110 00 000000011111222233322334
Q ss_pred HHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeE
Q 003127 569 VKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL 600 (845)
Q Consensus 569 v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgI 600 (845)
.+.+.....+.++|+||+ .+|+.+=+.||+-.
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 444432112479999999 69999999998754
No 194
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=59.49 E-value=45 Score=35.20 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=51.1
Q ss_pred ChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcC-CeeEEEEeChhcHHH
Q 003127 489 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP-KIQVMARSSPMDKHT 567 (845)
Q Consensus 489 ~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~-~~~v~~~~~p~~K~~ 567 (845)
-++..++++.|++.|. ..++|........ .-+..... .|.-+ ..+..... +.....+.+|+-=..
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~----~~~~~~~~----~g~~~-----~~i~~~~g~~~~~~gKP~p~~~~~ 210 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPL----SDGSRTPG----TGSLV-----AAIETASGRQPLVVGKPSPYMFEC 210 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCC----cCCCcccC----hHHHH-----HHHHHHhCCceeccCCCCHHHHHH
Confidence 5788999999999998 5677765532110 00110000 00000 00000000 111122334433344
Q ss_pred HHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEE
Q 003127 568 LVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLA 601 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIa 601 (845)
+++.+... .+.++||||. ..|+.+-+.||+--.
T Consensus 211 ~~~~~~~~-~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 211 ITENFSID-PARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HHHHhCCC-hhhEEEECCChHHHHHHHHHcCCcEE
Confidence 44444433 4789999999 599999999988644
No 195
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=58.93 E-value=47 Score=34.46 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCccCCceeeeCcccc---cC-CHHHHhhhcCCeeEEEE
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGILTDNGIAIEGPEFR---EK-SDEELSKLIPKIQVMAR 559 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~~~~~~~i~g~~~~---~~-~~~~~~~~~~~~~v~~~ 559 (845)
.+.+++++.|+.+++.|+.+.-+|.|.+.......++ +|+.-.+.. ...+.+. .. ....-.-.+.+-..|
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~-~~~~~~~~~~~~~~~~~~~~~~~~GIlf-- 157 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS-FPEDGIISFPVFDSALSRAPSFYDGILF-- 157 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc-cccCcceecccccCCCCCCceeecCeEE--
Confidence 3567899999999999999999999997665555444 576643221 0000000 00 000000001111233
Q ss_pred eChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHh
Q 003127 560 SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHE 595 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~ 595 (845)
+...+|+..+..+-...| +.+.++-|....+..+..
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 244789888888877655 689999999888776543
No 196
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=58.07 E-value=69 Score=39.75 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=31.9
Q ss_pred CChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q 003127 488 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECG 525 (845)
Q Consensus 488 l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lg 525 (845)
+.++..+++++|.+. +..|+++|||+..+.......++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 557889999999765 78899999999999988876654
No 197
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=57.85 E-value=45 Score=36.08 Aligned_cols=49 Identities=14% Similarity=0.140 Sum_probs=39.6
Q ss_pred EEeeecCCCChhHHHHHHHHHHc----CCEEEEEcCCC---HHH-HHHHHHHcCCcc
Q 003127 480 GIVGIKDPMRPGVKESVAICRSA----GITVRMVTGDN---INT-AKAIARECGILT 528 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~----Gi~v~~~TGd~---~~t-a~~ia~~lgi~~ 528 (845)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+..
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 77777888999999999999999 99999999554 444 555668888753
No 198
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=57.65 E-value=19 Score=29.28 Aligned_cols=54 Identities=22% Similarity=0.307 Sum_probs=34.9
Q ss_pred HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEeCCCCc---HHH---HhccCEEecc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMGIAGT---EVA---KESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIamg~~~~---~~a---k~~ad~v~~~ 620 (845)
..+.+.+... ...++|+||. ..|+.+=+++|+--..=.+|. +.. ...+|+++.+
T Consensus 11 ~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 11 EQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 3444444433 3679999999 999999999987544311322 222 2578898754
No 199
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=55.75 E-value=66 Score=32.68 Aligned_cols=87 Identities=13% Similarity=0.115 Sum_probs=55.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHH----HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINT----AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t----a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++-|++.|-++...+.|.+|..+|-|..+. +..-.++.|+.... .+..++- -..
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~---------------------~~~~llk-k~~ 179 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL---------------------ESHLLLK-KDK 179 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc---------------------ccceEEe-eCC
Confidence 466899999999999999999999998766 34444556665321 1111221 122
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
..|..=.+.+++. -+.|+.+||..+|.......
T Consensus 180 k~Ke~R~~~v~k~-~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 180 KSKEVRRQAVEKD-YKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred CcHHHHHHHHhhc-cceeeEecCchhhhcchhhh
Confidence 2333333333333 36899999999998766544
No 200
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=53.98 E-value=81 Score=33.20 Aligned_cols=172 Identities=17% Similarity=0.207 Sum_probs=97.8
Q ss_pred EEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCC-----CCC----------C
Q 003127 405 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SAD----------A 469 (845)
Q Consensus 405 ~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~-----~~~----------~ 469 (845)
+-.-|.+..+.+...+ .+-..+.-+=..-.++++..++++++|+.++.++.+.-++-. ..+ .
T Consensus 71 irAHGv~~~~~~~~~~---~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~ 147 (280)
T TIGR00216 71 IRAHGVPPEVREELEK---KGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDL 147 (280)
T ss_pred EeCCCCCHHHHHHHHH---CCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHH
Confidence 3345777777766542 122232222223356888999999999999999987665420 000 0
Q ss_pred CCCCCceEEEEEeeecCCCChhHHHHHHHHHHcC----C----EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 003127 470 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG----I----TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541 (845)
Q Consensus 470 ~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~G----i----~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~ 541 (845)
+.+. ...-+|++.=--...++..+.++.|++.. + .++-+|-+....+..+|+++.+. +
T Consensus 148 ~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m----i--------- 213 (280)
T TIGR00216 148 ENFK-VEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM----I--------- 213 (280)
T ss_pred HhCC-CCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE----E---------
Confidence 0000 01225555533345556677777777654 1 25566777777777777776654 1
Q ss_pred CCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhC-CeeEEeCCCCcHH
Q 003127 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEA-DIGLAMGIAGTEV 609 (845)
Q Consensus 542 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A-~vgIamg~~~~~~ 609 (845)
|.......+-.++.+..++. +..+..+.+. .-|.++|+.+ .+||.-| .+++.
T Consensus 214 --------------VVGg~nSsNT~rL~ei~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-ASTP~ 267 (280)
T TIGR00216 214 --------------VIGGKNSSNTTRLYEIAEEH-GPPSYLIETAEELPEEWLKGVKVVGITAG-ASTPD 267 (280)
T ss_pred --------------EECCCCCchHHHHHHHHHHh-CCCEEEECChHHCCHHHhCCCCEEEEEec-CCCCH
Confidence 33333444556666766666 6556665443 2255677754 4688888 55543
No 201
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=52.40 E-value=85 Score=39.39 Aligned_cols=41 Identities=12% Similarity=0.204 Sum_probs=32.7
Q ss_pred hcHHHHHHHHHhhcC----CEEEEEcCCcc-CHH-HHHhCCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLG----EVVAVTGDGTN-DAP-ALHEADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g----~~v~~~GDg~N-D~~-ml~~A~vgIamg 603 (845)
..|.+.+++|..++| ++++++||+-| |.+ |+.--+-+|-+.
T Consensus 955 ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 955 ASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred CCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 579999999998877 45577899999 955 766777777763
No 202
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=52.38 E-value=76 Score=32.17 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCc
Q 003127 37 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 108 (845)
Q Consensus 37 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~ 108 (845)
++++++++.+.+++++++.++..+..+..... +...+ ++-|....+...|.+|-|.+.+...+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~ 64 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVTV----IRDGRWQKIPSSELVPGDIIILKAGD 64 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEEE----EETTEEEEEEGGGT-TTSEEEEETTE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEEE----EeccccccchHhhccceeeeeccccc
Confidence 55666777777788877777666555543221 21222 23379999999999999999998653
No 203
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=50.15 E-value=2.4e+02 Score=28.23 Aligned_cols=20 Identities=15% Similarity=-0.032 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 003127 821 QWFVSILLGFLGMPIAAVLK 840 (845)
Q Consensus 821 ~w~~~~~~~~~~~~~~~i~K 840 (845)
.|...+..+++..+...+.|
T Consensus 180 ~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 180 PWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45554444443333344444
No 204
>PRK11507 ribosome-associated protein; Provisional
Probab=47.84 E-value=23 Score=28.49 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=22.9
Q ss_pred EEEECCeEEEEecCCcCCCcEEEEcC
Q 003127 68 QVARNGFRRKISIYDLLPGDIVHLCM 93 (845)
Q Consensus 68 ~V~r~g~~~~i~~~~l~~GDii~l~~ 93 (845)
.|..||+...-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 56779999999999999999999864
No 205
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=47.17 E-value=2.9e+02 Score=33.95 Aligned_cols=193 Identities=18% Similarity=0.146 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCc-eeEec
Q 003127 35 MSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-VLINE 113 (845)
Q Consensus 35 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~-~~Vde 113 (845)
+.+++++++++..+++++++.++..+...+.... + ..+ ++-|....+...|.+|-|.++++..+ +-+|=
T Consensus 59 ~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~-----~-~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg 128 (755)
T TIGR01647 59 VIILGLLLLNATIGFIEENKAGNAVEALKQSLAP-----K-ARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPADC 128 (755)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----e-EEE----EECCEEEEEEhhhCcCCCEEEECCCCEEeceE
Confidence 4445555667777888887777666555543211 1 111 23478889999999999999999643 33454
Q ss_pred ccCCCCCCccccc--CC--CCe-EEeccEEEeceEEEEEEEEeecchhhH---HHHhhccCCCCCChhHHHHHHHHHHHH
Q 003127 114 SSLTGESEPVNVN--AL--NPF-LLSGTKVQNGSCKMLVTTVGMRTQWGK---LMATLSEGGDDETPLQVKLNGVATIIG 185 (845)
Q Consensus 114 s~LtGEs~p~~k~--~~--~~~-v~~Gt~v~~g~~~~~V~~tG~~T~~g~---i~~~~~~~~~~~~~l~~~~~~~~~~~~ 185 (845)
-.+.|+..-+.-+ .+ .++ -..|..+..|+....=..++.-+..|. +.+..+.-+..+. -...+++....+.
T Consensus 129 ~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~-~~~~lq~~~~~i~ 207 (755)
T TIGR01647 129 RLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTET-GSGHLQKILSKIG 207 (755)
T ss_pred EEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCC-CCCcHHHHHHHHH
Confidence 4444542222111 12 221 235677777764432222333332222 1222222222211 1223455555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHH---HHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 003127 186 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL---EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 258 (845)
Q Consensus 186 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l 258 (845)
.+...+.+++.++ .+.. .+. ..+..++...+...-.+.|.+++++...+....
T Consensus 208 ~~~~~~~~~~~~i---~~~~-----------------~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g 263 (755)
T TIGR01647 208 LFLIVLIGVLVLI---ELVV-----------------LFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG 263 (755)
T ss_pred HHHHHHHHHHHHH---HHHH-----------------HHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHH
Confidence 4433332222221 1110 111 223445555556666677777777777766543
No 206
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=46.88 E-value=1e+02 Score=32.85 Aligned_cols=174 Identities=11% Similarity=0.137 Sum_probs=91.2
Q ss_pred EEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCC-----CCC----------
Q 003127 404 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SAD---------- 468 (845)
Q Consensus 404 ~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~-----~~~---------- 468 (845)
.+-.-|.+..+.+...+ .+-..+.-+=..-.++++..+++.++|+.++.++.+.-++-. ..+
T Consensus 70 iirAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e 146 (298)
T PRK01045 70 IFSAHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPED 146 (298)
T ss_pred EEeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHH
Confidence 33345777777766542 122222222223356888999999999999999977655420 000
Q ss_pred CCCCC-CceEEEEEeeecCCCChhHHHHHHHHHHcCCEE--------EEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 003127 469 APIPT-EGYTCIGIVGIKDPMRPGVKESVAICRSAGITV--------RMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539 (845)
Q Consensus 469 ~~~~e-~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v--------~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~ 539 (845)
.+.+. .+..-++++.---...++..+.++.+++..-.+ +.+|-+....+..+|+++... .
T Consensus 147 ~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m----i------- 215 (298)
T PRK01045 147 VAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV----I------- 215 (298)
T ss_pred HhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE----E-------
Confidence 00110 111223444433334445555555555543222 335555556666666655443 1
Q ss_pred ccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHH-hCCeeEEeCCCCcHH
Q 003127 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALH-EADIGLAMGIAGTEV 609 (845)
Q Consensus 540 ~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~-~A~vgIamg~~~~~~ 609 (845)
|.......+-.++.+..++. +..+..+.+- .-|...|+ ...+||.-| .+++.
T Consensus 216 ----------------VVGg~~SsNT~kL~~i~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP~ 269 (298)
T PRK01045 216 ----------------VVGSKNSSNSNRLREVAEEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAPE 269 (298)
T ss_pred ----------------EECCCCCccHHHHHHHHHHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCCCH
Confidence 33333444556666766666 6556665442 22445665 446899888 55553
No 207
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=46.05 E-value=38 Score=34.62 Aligned_cols=94 Identities=16% Similarity=0.163 Sum_probs=57.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 565 (845)
++-++..+++++||++|.++.++|-=.. ..+.+-..+|+...-+.++.+.+ + .-..|+-+
T Consensus 113 ~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD~vv~S~e-----------------~-g~~KPDp~I 173 (237)
T KOG3085|consen 113 KYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFDFVVESCE-----------------V-GLEKPDPRI 173 (237)
T ss_pred eeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhhhhhhhhh-----------------h-ccCCCChHH
Confidence 3445666999999999988888876443 23366666676532211211111 1 11223322
Q ss_pred -HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeE
Q 003127 566 -HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL 600 (845)
Q Consensus 566 -~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgI 600 (845)
...++.+..+ .+.++++||. .||+..-+.+|.--
T Consensus 174 f~~al~~l~v~-Pee~vhIgD~l~nD~~gA~~~G~~a 209 (237)
T KOG3085|consen 174 FQLALERLGVK-PEECVHIGDLLENDYEGARNLGWHA 209 (237)
T ss_pred HHHHHHHhCCC-hHHeEEecCccccccHhHHHcCCEE
Confidence 4455666555 6789999987 79999999887643
No 208
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.87 E-value=3.1e+02 Score=29.26 Aligned_cols=167 Identities=13% Similarity=0.171 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh--hHHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~--~~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++.++|.+. . ++.+...|.... .+..-++.+++.|++...
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P-~-----------------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 67 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEP-A-----------------------LAVILVGNDPASQVYVRNKILRAEEAGIRSLE 67 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677777888877666432 2 334444554444 346778888999999755
Q ss_pred Ec--CC-CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhh------------------cCCeeEEEEeChhcHH
Q 003127 509 VT--GD-NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKL------------------IPKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~T--Gd-~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~------------------~~~~~v~~~~~p~~K~ 566 (845)
.- .+ ..+...+.-++++=+... ++.+.-+--...++..+.+. ......|.-++|..=.
T Consensus 68 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii 147 (301)
T PRK14194 68 HRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCL 147 (301)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHH
Confidence 42 22 344555666666554332 23332222223333332222 2122234456666666
Q ss_pred HHHHHHHhh-cCCEEEEEcCC-ccCHH---HHHhCCeeEEeCCCCc---HHHHhccCEEeccC
Q 003127 567 TLVKHLRTT-LGEVVAVTGDG-TNDAP---ALHEADIGLAMGIAGT---EVAKESADVIILDD 621 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg-~ND~~---ml~~A~vgIamg~~~~---~~ak~~ad~v~~~~ 621 (845)
+++++.... .|+.++++|-| .-=.| +|.++|..+.+-++.+ ..+.+.||+++.--
T Consensus 148 ~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsav 210 (301)
T PRK14194 148 RLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAV 210 (301)
T ss_pred HHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEec
Confidence 666665432 26899999997 44333 5667777776542222 23456789988653
No 209
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=44.95 E-value=52 Score=31.98 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=64.2
Q ss_pred cCCCChhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc---------------------ccC
Q 003127 485 KDPMRPGVKESVAIC-RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF---------------------REK 542 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l-~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~---------------------~~~ 542 (845)
.+-.-+++.+..+++ .+.|.++++..|.+ |..+.+..+++-- ..-+++.++ ...
T Consensus 15 ~~~~~e~~v~~a~~~~~~~g~dViIsRG~t---a~~lr~~~~iPVV-~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~ 90 (176)
T PF06506_consen 15 IEASLEEAVEEARQLLESEGADVIISRGGT---AELLRKHVSIPVV-EIPISGFDILRALAKAKKYGPKIAVVGYPNIIP 90 (176)
T ss_dssp EE--HHHHHHHHHHHHTTTT-SEEEEEHHH---HHHHHCC-SS-EE-EE---HHHHHHHHHHCCCCTSEEEEEEESS-SC
T ss_pred EEecHHHHHHHHHHhhHhcCCeEEEECCHH---HHHHHHhCCCCEE-EECCCHhHHHHHHHHHHhcCCcEEEEecccccH
Confidence 344556777888888 88999999999875 4444444444210 000111111 001
Q ss_pred CHHHHhhhc-CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC
Q 003127 543 SDEELSKLI-PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 621 (845)
Q Consensus 543 ~~~~~~~~~-~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~ 621 (845)
..+.+.+++ .+...+.-.++++-...++.+++. |-.+. +|++.- ...-++.| -..++...
T Consensus 91 ~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~-G~~vi-VGg~~~-~~~A~~~g----------------l~~v~i~s 151 (176)
T PF06506_consen 91 GLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAE-GVDVI-VGGGVV-CRLARKLG----------------LPGVLIES 151 (176)
T ss_dssp CHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHT-T--EE-EESHHH-HHHHHHTT----------------SEEEESS-
T ss_pred HHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHc-CCcEE-ECCHHH-HHHHHHcC----------------CcEEEEEe
Confidence 122233322 122333334445555555555544 43332 244421 22222222 23456666
Q ss_pred ChhHHHHHHHHHHHHHHHHHH
Q 003127 622 NFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 622 ~~~~i~~~i~~gR~~~~~i~~ 642 (845)
+.+++..++.+++.+.+..++
T Consensus 152 g~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 152 GEESIRRALEEALRIARARRR 172 (176)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999988876653
No 210
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=43.02 E-value=46 Score=27.95 Aligned_cols=13 Identities=38% Similarity=0.340 Sum_probs=6.3
Q ss_pred CcCCCcEEEEcCC
Q 003127 82 DLLPGDIVHLCMG 94 (845)
Q Consensus 82 ~l~~GDii~l~~G 94 (845)
+|+|||-|....|
T Consensus 37 ~L~~Gd~VvT~gG 49 (84)
T TIGR00739 37 SLKKGDKVLTIGG 49 (84)
T ss_pred hCCCCCEEEECCC
Confidence 4445555544444
No 211
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=42.93 E-value=4.5e+02 Score=33.49 Aligned_cols=79 Identities=16% Similarity=0.136 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCc-e
Q 003127 31 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-V 109 (845)
Q Consensus 31 ~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~-~ 109 (845)
....++++++++++++..++++++.++..+..+..... +... ++-|-...+...|.+|-|.++++..+ +
T Consensus 104 ~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~-----~~~V-----iRdg~~~~I~~~~lv~GDiv~l~~Gd~I 173 (997)
T TIGR01106 104 LYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQ-----QALV-----IRDGEKMSINAEQVVVGDLVEVKGGDRI 173 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----eeEE-----EECCEEEEeeHHHCCCCCEEEECCCCEE
Confidence 34556677777788888888888888777666553221 1111 23477888889999999999998543 3
Q ss_pred eEecccCCCC
Q 003127 110 LINESSLTGE 119 (845)
Q Consensus 110 ~Vdes~LtGE 119 (845)
-.|=-.+.|+
T Consensus 174 PaD~~il~~~ 183 (997)
T TIGR01106 174 PADLRIISAQ 183 (997)
T ss_pred eeeEEEEEcc
Confidence 3344444444
No 212
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=42.89 E-value=2e+02 Score=30.09 Aligned_cols=40 Identities=15% Similarity=0.339 Sum_probs=23.6
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHH---HhCCe-eEEeC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL---HEADI-GLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml---~~A~v-gIamg 603 (845)
++-...++.+++..+ .-.++|=|.|+.+.. ..+|. |+.+|
T Consensus 188 ~~~~~~i~~ir~~t~-~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 188 KKLKKLIETIKKMTN-KPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred HHHHHHHHHHHHhcC-CCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 445677777777633 334459999855444 33322 56566
No 213
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=42.78 E-value=15 Score=29.14 Aligned_cols=27 Identities=33% Similarity=0.442 Sum_probs=15.1
Q ss_pred EEEECCeEEEEecCCcCCCcEEEEcCCC
Q 003127 68 QVARNGFRRKISIYDLLPGDIVHLCMGD 95 (845)
Q Consensus 68 ~V~r~g~~~~i~~~~l~~GDii~l~~G~ 95 (845)
.|..||+.+.-.-..|.+||+|.+ .|+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCE
Confidence 356799999999999999999999 443
No 214
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=40.66 E-value=90 Score=31.26 Aligned_cols=108 Identities=13% Similarity=0.064 Sum_probs=72.1
Q ss_pred EEeeecCCCChhH--HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 480 GIVGIKDPMRPGV--KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 480 G~~~~~d~l~~~~--~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
|.+-+++ ++|+- ++.+-.|++.+ -|+.|.-...-|.++.+.+||...-..++.-+...-. +..++
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~----------~~~~v 158 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI----------EKTVV 158 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC----------CCcee
Confidence 4455566 66654 67777777665 8999999999999999999998654333322221111 22367
Q ss_pred EEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 558 ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
|..+++.=....+...-.-.+.+.++-|+.+.+..-+..|..=
T Consensus 159 cKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~t 201 (244)
T KOG3109|consen 159 CKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKT 201 (244)
T ss_pred ecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhcccee
Confidence 7777665555555544332468999999999998888777553
No 215
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.06 E-value=3.5e+02 Score=28.60 Aligned_cols=166 Identities=13% Similarity=0.154 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++..+|.+. . ++.+-..|..... +...++.+++.|+++.+
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 66 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-G-----------------------LAVILVGDNPASQVYVRNKVKACEDNGFHSLK 66 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 44556677777788777666432 2 3344445544433 47788899999999766
Q ss_pred EcCC---CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcHH
Q 003127 509 VTGD---NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~TGd---~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K~ 566 (845)
.-=. ..+.....-++++=+..- ++++.-+--...++..+.+.+ .....|.-|+|..=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii 146 (285)
T PRK14189 67 DRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVM 146 (285)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHH
Confidence 5433 345566666666554332 233332222233333333222 111234455665555
Q ss_pred HHHHHHHhh-cCCEEEEEcCCcc---C-HHHHHhCCeeEEeCCCCcH---HHHhccCEEecc
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTN---D-APALHEADIGLAMGIAGTE---VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~N---D-~~ml~~A~vgIamg~~~~~---~ak~~ad~v~~~ 620 (845)
+++++.... .|+.++.+|-|.. - +.||...|.-|.+-...++ ..-..||+++..
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 147 KMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 555554422 2689999999866 2 3355555555543322222 245678988864
No 216
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=39.63 E-value=36 Score=30.55 Aligned_cols=40 Identities=28% Similarity=0.288 Sum_probs=31.0
Q ss_pred CChhHHHHHHHHHHcCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~-v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
..+.+.+.++++.+.|++ +|+.+|...+.+...+++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 567789999999999998 9999999999999999998874
No 217
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.28 E-value=4.4e+02 Score=27.86 Aligned_cols=166 Identities=15% Similarity=0.197 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHHHHh-hchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEE
Q 003127 431 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 507 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~-G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~ 507 (845)
+.++.++++.+.++++..+ |.+. . ++.+-..|..... +...++.+++.|+++.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 65 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVP-G-----------------------LVVILVGDNPASQVYVRNKERSALAAGFKSE 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCc-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 4455566777777777655 4322 1 3445555555443 3567889999999976
Q ss_pred EEcCC---CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhh------------------cCCeeEEEEeChhcH
Q 003127 508 MVTGD---NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKL------------------IPKIQVMARSSPMDK 565 (845)
Q Consensus 508 ~~TGd---~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~------------------~~~~~v~~~~~p~~K 565 (845)
...=. ..+.....-++++=+... ++++.-+--...+++.+.+. ......|.-|+|..=
T Consensus 66 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 145 (284)
T PRK14179 66 VVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGI 145 (284)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHH
Confidence 65433 245556666666544332 22332221123333333222 211123455666665
Q ss_pred HHHHHHHHhh-cCCEEEEEcC-CccCHH---HHHhCCeeEEeCCCCcH---HHHhccCEEecc
Q 003127 566 HTLVKHLRTT-LGEVVAVTGD-GTNDAP---ALHEADIGLAMGIAGTE---VAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~-~g~~v~~~GD-g~ND~~---ml~~A~vgIamg~~~~~---~ak~~ad~v~~~ 620 (845)
.++++..... .|+.++++|- |.-=.| +|.++|.-+.+-...++ ..-..||+++.-
T Consensus 146 i~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 146 MEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5666555432 2689999999 444444 56666666655312222 245679998864
No 218
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=39.24 E-value=79 Score=25.37 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=25.1
Q ss_pred CCeeEEEECCeEEEEec---CCcCCCcEEEEcCCCe
Q 003127 64 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGDQ 96 (845)
Q Consensus 64 ~~~~~V~r~g~~~~i~~---~~l~~GDii~l~~G~~ 96 (845)
...+.|-.+|..++++. .++.|||-|++..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 45678888999999864 5688999999999954
No 219
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=38.82 E-value=60 Score=29.10 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=30.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 526 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi 526 (845)
.-=.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 53 SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 53 SGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 34567899999999999999999998874 4446665554
No 220
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=37.68 E-value=74 Score=32.27 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=66.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC-CccCCce-e-eeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG-ILTDNGI-A-IEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lg-i~~~~~~-~-i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.+.||+.+.++.|+..|+.+.++|+.+..+...-.+..+ +...-.. + .+|++.. .....|+
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~----------------~gKP~Pd 155 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVK----------------NGKPDPD 155 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCcccc----------------CCCCCch
Confidence 456699999999999999999999997766655444444 3221111 1 1222221 1123444
Q ss_pred cHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 564 DKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 564 ~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
-=....+.+... . +.++++.|..+=+.|-++||.-+-|-
T Consensus 156 i~l~A~~~l~~~-~~~k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 156 IYLKAAKRLGVP-PPSKCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred HHHHHHHhcCCC-CccceEEECCCHHHHHHHHhcCCeEEEe
Confidence 445666666665 4 77888899999999999998877664
No 221
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=37.46 E-value=1.9e+02 Score=30.44 Aligned_cols=172 Identities=12% Similarity=0.128 Sum_probs=90.4
Q ss_pred EEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCC-----CCCC----------
Q 003127 405 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADA---------- 469 (845)
Q Consensus 405 ~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~-----~~~~---------- 469 (845)
+-.-|.+..+.+...+ .+-..+.-+=..-.++++..++++++|+.++.++.+.-++-. ..+.
T Consensus 74 irAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~ 150 (281)
T PRK12360 74 IRSHGVSKKVYKDLKD---KGLEIIDATCPFVKKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEV 150 (281)
T ss_pred EeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHH
Confidence 3345777777666542 122222222222356888899999999999999977655420 0000
Q ss_pred CCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCE------EEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 470 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT------VRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 470 ~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~------v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
+.+. ...=++++.=--...++..+.++.|++..-+ ++-+|-+....++.+|+++.+.
T Consensus 151 ~~l~-~~~kv~~vsQTT~~~~~~~~iv~~l~~~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~m---------------- 213 (281)
T PRK12360 151 ENIP-FLDKACVVAQTTIIPELWEDILNVIKLKSKELVFFNTICSATKKRQESAKELSKEVDVM---------------- 213 (281)
T ss_pred hhCc-cccCEEEEECCCCcHHHHHHHHHHHHHhCcccccCCCcchhhhhHHHHHHHHHHhCCEE----------------
Confidence 0000 0011333332223344555566666554333 3334555555556666555543
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcC-CccCHHHHH-hCCeeEEeCCCCcHH
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD-GTNDAPALH-EADIGLAMGIAGTEV 609 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GD-g~ND~~ml~-~A~vgIamg~~~~~~ 609 (845)
.|.......+-.++.+..++. +..+..+.+ ..-|.+.|+ ...+||.-| .+++.
T Consensus 214 -----------iVVGg~~SsNT~rL~eia~~~-~~~t~~Ie~~~el~~~~~~~~~~VGitaG-ASTP~ 268 (281)
T PRK12360 214 -----------IVIGGKHSSNTQKLVKICEKN-CPNTFHIETADELDLEMLKDYKIIGITAG-ASTPD 268 (281)
T ss_pred -----------EEecCCCCccHHHHHHHHHHH-CCCEEEECChHHCCHHHhCCCCEEEEEcc-CCCCH
Confidence 133334445566677766666 654555533 233556776 447899888 55553
No 222
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=35.96 E-value=55 Score=31.19 Aligned_cols=43 Identities=19% Similarity=0.073 Sum_probs=38.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
.=++||++.+.+++|++. +++++.|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345899999999999955 9999999999999999999998763
No 223
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=35.71 E-value=79 Score=27.88 Aligned_cols=13 Identities=38% Similarity=0.327 Sum_probs=6.2
Q ss_pred CcCCCcEEEEcCC
Q 003127 82 DLLPGDIVHLCMG 94 (845)
Q Consensus 82 ~l~~GDii~l~~G 94 (845)
+|++||-|....|
T Consensus 52 ~Lk~Gd~VvT~gG 64 (106)
T PRK05585 52 SLAKGDEVVTNGG 64 (106)
T ss_pred hcCCCCEEEECCC
Confidence 4445555544443
No 224
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=35.57 E-value=91 Score=27.63 Aligned_cols=6 Identities=50% Similarity=0.495 Sum_probs=2.3
Q ss_pred cEEEEc
Q 003127 87 DIVHLC 92 (845)
Q Consensus 87 Dii~l~ 92 (845)
|.+.++
T Consensus 61 ~~v~le 66 (109)
T PRK05886 61 DTVDLE 66 (109)
T ss_pred CEEEEE
Confidence 334433
No 225
>PF15584 Imm44: Immunity protein 44
Probab=35.47 E-value=17 Score=30.65 Aligned_cols=19 Identities=26% Similarity=0.660 Sum_probs=16.1
Q ss_pred CCcEEEEcCCCeeeccEEE
Q 003127 85 PGDIVHLCMGDQVPADGLF 103 (845)
Q Consensus 85 ~GDii~l~~G~~iPaD~~l 103 (845)
+.+-..|+.|+.|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4566788999999999986
No 226
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=35.04 E-value=3.8e+02 Score=28.51 Aligned_cols=85 Identities=21% Similarity=0.306 Sum_probs=50.7
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
.-.++...+.+. +..+++=|...++...+|+..+++ |++|-. -...|-|-..
T Consensus 88 si~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLt-------------------D~~HP~Q~LA 139 (310)
T COG0078 88 SIKDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP-----VINGLT-------------------DEFHPCQALA 139 (310)
T ss_pred cHHHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc-----eEcccc-------------------cccCcHHHHH
Confidence 344566666655 567888999999999999999986 333311 1124544433
Q ss_pred HHHHHHhhc----CCEEEEEcCCccCHH--HHHhCCeeE
Q 003127 568 LVKHLRTTL----GEVVAVTGDGTNDAP--ALHEADIGL 600 (845)
Q Consensus 568 ~v~~l~~~~----g~~v~~~GDg~ND~~--ml~~A~vgI 600 (845)
=+..+++++ |.+++++|||.|=+. |+-.|-+|.
T Consensus 140 Dl~Ti~E~~g~l~g~k~a~vGDgNNv~nSl~~~~a~~G~ 178 (310)
T COG0078 140 DLMTIKEHFGSLKGLKLAYVGDGNNVANSLLLAAAKLGM 178 (310)
T ss_pred HHHHHHHhcCcccCcEEEEEcCcchHHHHHHHHHHHhCC
Confidence 333333332 478999999944222 444444443
No 227
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.08 E-value=5.2e+02 Score=27.51 Aligned_cols=165 Identities=12% Similarity=0.192 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHHHHHh-hchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh--hHHHHHHHHHHcCCEEE
Q 003127 431 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 507 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~-G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~--~~~~~I~~l~~~Gi~v~ 507 (845)
+.++.++++.+.++++.++ |.+. . ++.+-..|.... .+....+.+++.|+++.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVP-G-----------------------LTVIIVGEDPASQVYVRNKAKSCKEIGMNST 64 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-e-----------------------EEEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 3445567777777777665 4322 2 334444444443 34778888999999976
Q ss_pred EEcCC---CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhh------------------hcCCe--eEEEEeChh
Q 003127 508 MVTGD---NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSK------------------LIPKI--QVMARSSPM 563 (845)
Q Consensus 508 ~~TGd---~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~------------------~~~~~--~v~~~~~p~ 563 (845)
..-=. ..+.....-++++-+... ++++.-+--...++..+.+ ++.+. .-|.-|+|.
T Consensus 65 ~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ 144 (295)
T PRK14174 65 VIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPY 144 (295)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHH
Confidence 55322 344555666666554432 2333222112333332222 22111 234456666
Q ss_pred cHHHHHHHHHhh-cCCEEEEEcCCcc---CHH-HHH------hCCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 564 DKHTLVKHLRTT-LGEVVAVTGDGTN---DAP-ALH------EADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 564 ~K~~~v~~l~~~-~g~~v~~~GDg~N---D~~-ml~------~A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
.=.++++..... .|+.++++|.|.. -+. ||. .|.|-++.. +..+ ..-..||+++..
T Consensus 145 ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 145 GILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 555555555422 2689999999865 233 332 356666554 2222 345779998865
No 228
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=33.77 E-value=1.5e+02 Score=26.72 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh-cCCeeEEEEeC--hhcHHH
Q 003127 491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL-IPKIQVMARSS--PMDKHT 567 (845)
Q Consensus 491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~-~~~~~v~~~~~--p~~K~~ 567 (845)
+..++++.+.+++.-.+.-+|.....|...+..+.........+.+.+... ...... -....++...+ +.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 356778888888877788888888888888777754433222222211110 000011 12222333222 234566
Q ss_pred HHHHHHhhcCCE-EEEEcCCccCHHHHHhCCeeEEeC
Q 003127 568 LVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 568 ~v~~l~~~~g~~-v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.++..+++ |-. +.++++..| ++-+.+|+.+-..
T Consensus 79 ~~~~a~~~-g~~iv~iT~~~~~--~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKER-GAKVIAITDSANS--PLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHc-CCeEEEEcCCCCC--hhHHhcCEEEEcC
Confidence 77777777 644 445554433 4446677777554
No 229
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=33.25 E-value=73 Score=26.61 Aligned_cols=14 Identities=43% Similarity=0.442 Sum_probs=0.4
Q ss_pred CCcCCCcEEEEcCC
Q 003127 81 YDLLPGDIVHLCMG 94 (845)
Q Consensus 81 ~~l~~GDii~l~~G 94 (845)
++|+|||-|....|
T Consensus 35 ~~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 35 ASLKPGDEVVTIGG 48 (82)
T ss_dssp G-------------
T ss_pred HcCCCCCEEEECCc
Confidence 35667776666655
No 230
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=32.81 E-value=1.1e+03 Score=30.36 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh----h-cC-Cee----EEEECCeEEEEecCCcCCCcEEEEcCCC---eeec
Q 003127 33 IVMSILLVVFVTATSDYKQSLQFKDLDRE----K-KK-ITV----QVARNGFRRKISIYDLLPGDIVHLCMGD---QVPA 99 (845)
Q Consensus 33 i~~~l~~~~~~~~~~~~~~~~~~~~l~~~----~-~~-~~~----~V~r~g~~~~i~~~~l~~GDii~l~~G~---~iPa 99 (845)
+++.+++..+..++.|+++.++.++..+. . +. ... .=++-|....+...|.+|-|.+.+...+ ..-+
T Consensus 57 L~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v 136 (1057)
T TIGR01652 57 LAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYV 136 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEE
Confidence 34445566778888999888887776542 1 11 111 2235588899999999999999998533 2344
Q ss_pred cEEEEeeC
Q 003127 100 DGLFVSGF 107 (845)
Q Consensus 100 D~~ll~~~ 107 (845)
|=--++|+
T Consensus 137 ~~s~l~GE 144 (1057)
T TIGR01652 137 ETANLDGE 144 (1057)
T ss_pred EeeccCCe
Confidence 44444443
No 231
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=32.61 E-value=34 Score=33.70 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
++-|++.|++++|++.|.+++++|+++.
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 5678999999999999999999999874
No 232
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=32.36 E-value=3.8e+02 Score=24.26 Aligned_cols=84 Identities=15% Similarity=0.257 Sum_probs=48.4
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh-
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p- 562 (845)
+-+++.++..+.+++ |+.+.+......+......+.... ++++..+
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~-----------------------------ii~~~~~~ 49 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA-----------------------------IIVGSGTP 49 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE-----------------------------EEESTTST
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE-----------------------------EEEcCCCC
Confidence 445666666665555 778888775555444333333221 3344433
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCcc--CHHHHHhCCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTN--DAPALHEADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~N--D~~ml~~A~vgIamg 603 (845)
-. ..+++.+. + =+-+...|-|.| |++++++-|+-++=.
T Consensus 50 ~~-~~~l~~~~-~-Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 50 LT-AEVLEAAP-N-LKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp BS-HHHHHHHT-T--SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred cC-HHHHhccc-e-eEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 33 34455552 2 257888899988 899999999888643
No 233
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=32.20 E-value=98 Score=26.80 Aligned_cols=13 Identities=38% Similarity=0.322 Sum_probs=7.2
Q ss_pred CcCCCcEEEEcCC
Q 003127 82 DLLPGDIVHLCMG 94 (845)
Q Consensus 82 ~l~~GDii~l~~G 94 (845)
+|++||-|....|
T Consensus 43 sL~kGD~VvT~gG 55 (97)
T COG1862 43 SLKKGDEVVTIGG 55 (97)
T ss_pred hccCCCEEEEcCC
Confidence 4555665555554
No 234
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=31.66 E-value=25 Score=29.28 Aligned_cols=26 Identities=31% Similarity=0.330 Sum_probs=17.6
Q ss_pred EecCCcCCCcEEEEc-CCCeeeccEEE
Q 003127 78 ISIYDLLPGDIVHLC-MGDQVPADGLF 103 (845)
Q Consensus 78 i~~~~l~~GDii~l~-~G~~iPaD~~l 103 (845)
+.-.+|.+||.|.+. .||+||-=..+
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~v 71 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVGV 71 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEEE
T ss_pred HHHcCCCCCCEEEEEECCCccceEeEe
Confidence 334689999999886 79999963333
No 235
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=30.41 E-value=3.7e+02 Score=23.46 Aligned_cols=105 Identities=15% Similarity=0.069 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 569 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 569 (845)
+-..+..+.|++.+++++++.-|... ..-+++-|. .++.|+..+...-++..-.-.+..+.+-.+++....+.
T Consensus 8 ~~~~~i~~~L~~~~~~vvvid~d~~~--~~~~~~~~~-----~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~~ 80 (116)
T PF02254_consen 8 RIGREIAEQLKEGGIDVVVIDRDPER--VEELREEGV-----EVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLIA 80 (116)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHH--HHHHHHTTS-----EEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEECCcHH--HHHHHhccc-----ccccccchhhhHHhhcCccccCEEEEccCCHHHHHHHH
Confidence 34577888999988899999888755 223334442 35555443322111111111122233333455556666
Q ss_pred HHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 570 KHLRTTLG-EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 570 ~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..+++..+ ..+.+.-+..+....|+.+|+-..
T Consensus 81 ~~~r~~~~~~~ii~~~~~~~~~~~l~~~g~d~v 113 (116)
T PF02254_consen 81 LLARELNPDIRIIARVNDPENAELLRQAGADHV 113 (116)
T ss_dssp HHHHHHTTTSEEEEEESSHHHHHHHHHTT-SEE
T ss_pred HHHHHHCCCCeEEEEECCHHHHHHHHHCCcCEE
Confidence 77776434 466666777788888888876543
No 236
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=30.34 E-value=58 Score=31.03 Aligned_cols=43 Identities=21% Similarity=0.284 Sum_probs=32.2
Q ss_pred EEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Q 003127 477 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 521 (845)
Q Consensus 477 ~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia 521 (845)
.++|+-.-- -.+++.+++++.++.|++++-+||++-.....++
T Consensus 112 vLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 112 VLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred EEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 344444322 4678899999999999999999999965555444
No 237
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.22 E-value=26 Score=34.26 Aligned_cols=14 Identities=36% Similarity=0.385 Sum_probs=12.4
Q ss_pred EEeccCCccCCCCe
Q 003127 280 ICSDKTGTLTTNHM 293 (845)
Q Consensus 280 i~~DKTGTLT~~~m 293 (845)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999998873
No 238
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=30.01 E-value=4.8e+02 Score=25.11 Aligned_cols=121 Identities=7% Similarity=0.147 Sum_probs=70.5
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe----ChhcHHH
Q 003127 492 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS----SPMDKHT 567 (845)
Q Consensus 492 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~----~p~~K~~ 567 (845)
..+.++.+.+.|.++.++-|+. +.+...++.+.-..++ ..+.... ++++-..
T Consensus 37 ~~~l~~~~~~~~~~ifllG~~~-~~~~~~~~~l~~~yP~-----------------------l~ivg~~~g~f~~~~~~~ 92 (172)
T PF03808_consen 37 FPDLLRRAEQRGKRIFLLGGSE-EVLEKAAANLRRRYPG-----------------------LRIVGYHHGYFDEEEEEA 92 (172)
T ss_pred HHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHHHCCC-----------------------eEEEEecCCCCChhhHHH
Confidence 4678888888999999987765 5555555544433222 2222222 3456677
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHH-------HhCCeeEEeCCCCcHH---HHhccCEEeccCChhHHHHHHHHHHHHH
Q 003127 568 LVKHLRTTLGEVVAVTGDGTNDAPAL-------HEADIGLAMGIAGTEV---AKESADVIILDDNFSTIVTVAKWGRSVY 637 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg~ND~~ml-------~~A~vgIamg~~~~~~---ak~~ad~v~~~~~~~~i~~~i~~gR~~~ 637 (845)
+++.+++. +..++.+|-|.---+.+ -.+.+.+++| .+-+. .+..|.-.+.+-+++.+..++++=|+.+
T Consensus 93 i~~~I~~~-~pdiv~vglG~PkQE~~~~~~~~~l~~~v~i~vG-~~~d~~aG~~~raP~w~~~~glEWlyRl~~eP~Rl~ 170 (172)
T PF03808_consen 93 IINRINAS-GPDIVFVGLGAPKQERWIARHRQRLPAGVIIGVG-GAFDFLAGKVKRAPKWMRRLGLEWLYRLLQEPKRLW 170 (172)
T ss_pred HHHHHHHc-CCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC-chhhhhccCcCccCHHHHHcCcHHHHHHHhChHhhh
Confidence 77777766 66666777776543322 1234666666 44443 1233444455566777777777766654
Q ss_pred H
Q 003127 638 I 638 (845)
Q Consensus 638 ~ 638 (845)
+
T Consensus 171 r 171 (172)
T PF03808_consen 171 R 171 (172)
T ss_pred c
Confidence 3
No 239
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.93 E-value=7e+02 Score=26.55 Aligned_cols=166 Identities=11% Similarity=0.144 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHHHHh-hchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh--hHHHHHHHHHHcCCEEE
Q 003127 431 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 507 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~-G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~--~~~~~I~~l~~~Gi~v~ 507 (845)
+.++.++++.+.++++..+ |.+. . +..+...|.... .+...++.+++.|+++.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p-~-----------------------La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~ 65 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTP-G-----------------------LAVVLVGEDPASQVYVRSKGKQTKEAGMASF 65 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 3445566677777777655 4322 2 334444444443 34678889999999866
Q ss_pred EE--cC-CCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcH
Q 003127 508 MV--TG-DNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDK 565 (845)
Q Consensus 508 ~~--TG-d~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K 565 (845)
+. .. -..+...+.-++++=+... ++++.-+--...++.++.+.+ .+...|.-++|..=
T Consensus 66 ~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai 145 (296)
T PRK14188 66 EHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGC 145 (296)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHH
Confidence 65 22 2445566666777655432 233322221233333322222 12223445666655
Q ss_pred HHHHHHHHhh-cCCEEEEEcCC-ccCH---HHHHhCCeeEEeCCC---CcHHHHhccCEEecc
Q 003127 566 HTLVKHLRTT-LGEVVAVTGDG-TNDA---PALHEADIGLAMGIA---GTEVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~-~g~~v~~~GDg-~ND~---~ml~~A~vgIamg~~---~~~~ak~~ad~v~~~ 620 (845)
.++++...-. .|+.++++|-+ .-=. .+|..+|..+.+-.+ ..+.+.+.||+++.-
T Consensus 146 ~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 146 MMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred HHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 5566554321 26899999944 3333 356677877766521 223455678988764
No 240
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=29.53 E-value=2.9e+02 Score=28.52 Aligned_cols=122 Identities=13% Similarity=0.176 Sum_probs=65.7
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHH
Q 003127 492 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 571 (845)
Q Consensus 492 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 571 (845)
..+.++.+.+.|.++.++ |-.+..+...++.+.-.. + .-+.|..-- .| +|++...+++.
T Consensus 94 ~~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y-~-l~i~g~~~G---------------yf---~~~e~~~i~~~ 152 (243)
T PRK03692 94 WEALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQW-N-VNIVGSQDG---------------YF---TPEQRQALFER 152 (243)
T ss_pred HHHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHh-C-CEEEEEeCC---------------CC---CHHHHHHHHHH
Confidence 356777778889999999 666677666666654322 1 111110000 01 23444456666
Q ss_pred HHhhcCCEEEEEcCCccCHHH-------HHhCCeeEEeCCCCcHH---HHhccCEEeccCChhHHHHHHHHHHHH
Q 003127 572 LRTTLGEVVAVTGDGTNDAPA-------LHEADIGLAMGIAGTEV---AKESADVIILDDNFSTIVTVAKWGRSV 636 (845)
Q Consensus 572 l~~~~g~~v~~~GDg~ND~~m-------l~~A~vgIamg~~~~~~---ak~~ad~v~~~~~~~~i~~~i~~gR~~ 636 (845)
+.+. +..++.+|=|.-==+. .-.+.+.+++| .+-|. ...-|.-...+-+++.+..++++-|+.
T Consensus 153 I~~s-~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvG-g~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~ 225 (243)
T PRK03692 153 IHAS-GAKIVTVAMGSPKQEIFMRDCRLVYPDALYMGVG-GTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI 225 (243)
T ss_pred HHhc-CCCEEEEECCCcHHHHHHHHHHHhCCCCEEEEeC-eEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHH
Confidence 6655 5556666665431111 11234444445 33332 233344455667899999999887774
No 241
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=29.19 E-value=1.3e+03 Score=29.27 Aligned_cols=37 Identities=24% Similarity=0.169 Sum_probs=27.2
Q ss_pred ECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCc
Q 003127 71 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 108 (845)
Q Consensus 71 r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~ 108 (845)
.-|....+...|.+|.|.+.++. +..-+|=-.|.|++
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~g-~~l~VdES~LTGES 221 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFISG-LSLEIDESSITGES 221 (941)
T ss_pred CCCCEEEECCCCEecccEEEEEc-CcEEEEecccCCCC
Confidence 45889999999999999999964 34445555555554
No 242
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=29.18 E-value=1.5e+02 Score=24.67 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=38.0
Q ss_pred eeecCCCChhHHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 003127 482 VGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 527 (845)
Q Consensus 482 ~~~~d~l~~~~~~~I~~l~~~Gi~v~~-~TGd~~~ta~~ia~~lgi~ 527 (845)
+.+.+...+.+.+..+.|+++|+++.+ ..+++...-...|++.|..
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 344566778889999999999999988 5778888888889988875
No 243
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=29.06 E-value=65 Score=27.89 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=23.0
Q ss_pred EEEECCeEEEEecCCcCCCcEEEEcCCCee
Q 003127 68 QVARNGFRRKISIYDLLPGDIVHLCMGDQV 97 (845)
Q Consensus 68 ~V~r~g~~~~i~~~~l~~GDii~l~~G~~i 97 (845)
+|.-||+.. -++.++++||+|.|.-|...
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 344477766 78999999999999988654
No 244
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=28.76 E-value=4e+02 Score=27.38 Aligned_cols=36 Identities=11% Similarity=0.125 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCC--CHHHHHHHHHHcC
Q 003127 490 PGVKESVAICRSAGITVRMVTGD--NINTAKAIARECG 525 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd--~~~ta~~ia~~lg 525 (845)
++..+.++.+++.|+++.++-.- +.+....+++...
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~ 153 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSP 153 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCC
Confidence 56778888889999986555443 3556666666543
No 245
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=28.70 E-value=90 Score=32.88 Aligned_cols=48 Identities=19% Similarity=0.378 Sum_probs=41.5
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 527 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~ 527 (845)
|.+...+.+-|++.|+++.|++.|-++.++|-.+-.+-+..+++ +|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 88888999999999999999999999999999988777777663 5554
No 246
>PLN02645 phosphoglycolate phosphatase
Probab=28.41 E-value=1e+02 Score=33.13 Aligned_cols=51 Identities=14% Similarity=0.152 Sum_probs=32.8
Q ss_pred CCEEEEEcCCc-cCHHHHHhCCeeEE---eCCCCcHHHH-----hccCEEeccCChhHHHHH
Q 003127 577 GEVVAVTGDGT-NDAPALHEADIGLA---MGIAGTEVAK-----ESADVIILDDNFSTIVTV 629 (845)
Q Consensus 577 g~~v~~~GDg~-ND~~ml~~A~vgIa---mg~~~~~~ak-----~~ad~v~~~~~~~~i~~~ 629 (845)
.+.++||||.. +|+.+-+.||+--. -|....+... ..+|+++.+ +..+.++
T Consensus 247 ~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~--~~~l~~~ 306 (311)
T PLN02645 247 KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSK--ISDFLTL 306 (311)
T ss_pred cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECC--HHHHHHH
Confidence 46899999997 99999999995432 2322222222 247888854 6655543
No 247
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=28.22 E-value=1.3e+02 Score=30.92 Aligned_cols=44 Identities=20% Similarity=0.254 Sum_probs=37.3
Q ss_pred cCCCChhH-HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGV-KESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~-~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
......+. ++.|++|+++|+.|+-++-|.-.+=..+.+++|+..
T Consensus 190 ~t~m~~~~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 190 DTSMDADILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 33444444 889999999999999999999999999999999864
No 248
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=28.18 E-value=3.6e+02 Score=26.27 Aligned_cols=125 Identities=9% Similarity=0.089 Sum_probs=64.2
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHH
Q 003127 492 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 571 (845)
Q Consensus 492 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 571 (845)
..+.++.+.+.|.++.++ |-.+..+...++.+.-..++..+. |. ... .+|++-..+++.
T Consensus 37 ~~~l~~~~~~~~~~vfll-G~~~~v~~~~~~~l~~~yP~l~i~-g~-~g~------------------f~~~~~~~i~~~ 95 (177)
T TIGR00696 37 MEELCQRAGKEKLPIFLY-GGKPDVLQQLKVKLIKEYPKLKIV-GA-FGP------------------LEPEERKAALAK 95 (177)
T ss_pred HHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCCCCEEE-EE-CCC------------------CChHHHHHHHHH
Confidence 357778888899999999 666677777777765443332221 11 000 012333334444
Q ss_pred HHhhcCCEEEEEcCCccCHHHH-------HhCCeeEEeCCCCcHH---HHhccCEEeccCChhHHHHHHHHHHHHHHH
Q 003127 572 LRTTLGEVVAVTGDGTNDAPAL-------HEADIGLAMGIAGTEV---AKESADVIILDDNFSTIVTVAKWGRSVYIN 639 (845)
Q Consensus 572 l~~~~g~~v~~~GDg~ND~~ml-------~~A~vgIamg~~~~~~---ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~ 639 (845)
+.+. +..++.+|=|.-=-+.+ ...++.+++| .+-|. .+.-|.-...+-+++-+..++++=|+..++
T Consensus 96 I~~s-~~dil~VglG~PkQE~~~~~~~~~~~~~v~~gvG-g~fd~~aG~~~rAP~w~~~~gLEWlyRl~~eP~R~~R~ 171 (177)
T TIGR00696 96 IARS-GAGIVFVGLGCPKQEIWMRNHRHLKPDAVMIGVG-GSFDVFSGLVKRAPRWLMRLGLEWLYRLRMEPWRWKRM 171 (177)
T ss_pred HHHc-CCCEEEEEcCCcHhHHHHHHhHHhCCCcEEEEec-eeeeecccCcCcCCHHHHHhCchHHHHhhhCcHHHHHh
Confidence 4444 44444444443321111 0122333333 22222 133344445566788999998887765443
No 249
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.98 E-value=7.3e+02 Score=26.22 Aligned_cols=166 Identities=18% Similarity=0.219 Sum_probs=88.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++..+|.+. . ++.+-..|..... +....+.+++.|++...
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIES-C-----------------------LAVILVGDNPASQTYVKSKAKACEECGIKSLV 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34555667777777777666432 2 3344445544443 36778888999999665
Q ss_pred EcCC---CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CC-eeEEEEeChhcH
Q 003127 509 VTGD---NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PK-IQVMARSSPMDK 565 (845)
Q Consensus 509 ~TGd---~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~-~~v~~~~~p~~K 565 (845)
.-=. ..+.....-++++=+... ++.+.-+--...+++++.+.+ .. ..-|.-++|..=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14166 65 YHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHH
Confidence 5333 345556666666544332 233332222233333332222 11 123445666666
Q ss_pred HHHHHHHHhh-cCCEEEEEcCCccC----HHHHHhCCeeEEeCCCCcH---HHHhccCEEecc
Q 003127 566 HTLVKHLRTT-LGEVVAVTGDGTND----APALHEADIGLAMGIAGTE---VAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~-~g~~v~~~GDg~ND----~~ml~~A~vgIamg~~~~~---~ak~~ad~v~~~ 620 (845)
.++++..... .|+.++++|-|..= +.||...|--|.+-.+-+. ..-..||+++..
T Consensus 145 i~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 145 MKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 6666665422 36899999988652 3355555555544323332 234678988764
No 250
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=27.54 E-value=89 Score=24.02 Aligned_cols=28 Identities=29% Similarity=0.382 Sum_probs=20.9
Q ss_pred hcCCeeEEEECCeEEEEecCCcCCCcEEEE
Q 003127 62 KKKITVQVARNGFRRKISIYDLLPGDIVHL 91 (845)
Q Consensus 62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l 91 (845)
.....+.| ||+...-+...|.+||.|.+
T Consensus 31 i~~G~V~V--Ng~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 31 LQENEVLV--NGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred HHcCCEEE--CCEEccCCCCCCCCCCEEEe
Confidence 33444554 89877777889999999976
No 251
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=27.48 E-value=29 Score=36.53 Aligned_cols=169 Identities=14% Similarity=0.214 Sum_probs=79.2
Q ss_pred eCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCC-----CCC--CC---------C-
Q 003127 408 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSA--DA---------P- 470 (845)
Q Consensus 408 kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~-----~~~--~~---------~- 470 (845)
-|.+..+.+...+ .+-..+..+=..-.++++..++++++|+.++.++.+.-++- ... .. .
T Consensus 72 HGv~~~~~~~l~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~ 148 (281)
T PF02401_consen 72 HGVPPEVYEELKE---RGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEK 148 (281)
T ss_dssp T---HHHHHHHHH---TTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHH
T ss_pred CCCCHHHHHHHHH---cCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcc
Confidence 4777777666542 12233333333456788999999999999999887644331 000 00 0
Q ss_pred CCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEE--------EEcCCCHHHHHHHHHHcCCccCCceeeeCcccccC
Q 003127 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVR--------MVTGDNINTAKAIARECGILTDNGIAIEGPEFREK 542 (845)
Q Consensus 471 ~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~--------~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~ 542 (845)
....+..-++++.=--...++..+.++.|++..-... -+|-+....+..+|+++.+.
T Consensus 149 l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m--------------- 213 (281)
T PF02401_consen 149 LPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM--------------- 213 (281)
T ss_dssp GGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE---------------
T ss_pred cCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE---------------
Confidence 0000111223333222334444555555555443333 22233333333343333321
Q ss_pred CHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCH--HHHHhC-CeeEEeCCCCcHH
Q 003127 543 SDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA--PALHEA-DIGLAMGIAGTEV 609 (845)
Q Consensus 543 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~--~ml~~A-~vgIamg~~~~~~ 609 (845)
.|...-...+-.++.+..++. +..+..+.+ ..|+ .+|+.+ .+||.-| .+++.
T Consensus 214 ------------iVIGg~~SsNT~kL~eia~~~-~~~t~~Ie~-~~el~~~~l~~~~~VGItaG-ASTP~ 268 (281)
T PF02401_consen 214 ------------IVIGGKNSSNTRKLAEIAKEH-GKPTYHIET-ADELDPEWLKGVKKVGITAG-ASTPD 268 (281)
T ss_dssp ------------EEES-TT-HHHHHHHHHHHHC-TTCEEEESS-GGG--HHHHTT-SEEEEEE--TTS-H
T ss_pred ------------EEecCCCCccHHHHHHHHHHh-CCCEEEeCC-ccccCHhHhCCCCEEEEEcc-CCCCH
Confidence 244444556777788887776 766666654 5555 467766 8899888 55553
No 252
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=27.35 E-value=1.4e+03 Score=29.31 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=26.8
Q ss_pred CCCcEEEEcCCCeeeccEEEEe---eCceeEecccCCCC
Q 003127 84 LPGDIVHLCMGDQVPADGLFVS---GFSVLINESSLTGE 119 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~---~~~~~Vdes~LtGE 119 (845)
+-|....+...|.+|-|.++++ |+.+-.|=-.+.|+
T Consensus 235 Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 235 RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 4588999999999999999998 43344455555553
No 253
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=27.34 E-value=65 Score=28.98 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTA 517 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 517 (845)
.-.+++.++++.+++.|.+++.+|+.+....
T Consensus 57 G~t~e~~~~~~~a~~~g~~vi~iT~~~~s~l 87 (126)
T cd05008 57 GETADTLAALRLAKEKGAKTVAITNVVGSTL 87 (126)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEECCCCChH
Confidence 4556799999999999999999999865443
No 254
>PRK13670 hypothetical protein; Provisional
Probab=27.32 E-value=4e+02 Score=29.67 Aligned_cols=98 Identities=21% Similarity=0.244 Sum_probs=63.5
Q ss_pred EEEEEeeecCCCChhHHHHHHHHHH---cCCEEEEEcCC----------CHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 477 TCIGIVGIKDPMRPGVKESVAICRS---AGITVRMVTGD----------NINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 477 ~~lG~~~~~d~l~~~~~~~I~~l~~---~Gi~v~~~TGd----------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
..+|+|+==|++..|-...|+++++ +|..+++++|+ +...=..++.++|++. ++.-
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~----viel------- 70 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDL----VVEL------- 70 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCE----EEEe-------
Confidence 4689999999999999999988875 47788888776 2333345566666542 1111
Q ss_pred HHHHhhhcCCeeEEEEeChhcHH-HHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 544 DEELSKLIPKIQVMARSSPMDKH-TLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~-~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
+- .++..+|++=. ..|+.| +.+|-..+++|....|...|+..
T Consensus 71 --------pf--~~a~~sae~F~~~aV~iL-~~l~v~~lv~G~e~g~~~~L~~~ 113 (388)
T PRK13670 71 --------PF--LYSVQSADFFAEGAVSIL-DALGVDSLVFGSESGDIEDFQKI 113 (388)
T ss_pred --------CC--chHhCCHHHHHHhHHHHH-HHcCCCEEEEcCCCCCHHHHHHH
Confidence 00 25566666544 345566 44476777889887777776643
No 255
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=27.21 E-value=47 Score=30.00 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=27.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA 519 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 519 (845)
.-.+++.++++.+|++|++++.+|+.+.....+
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~ 90 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNSTLAK 90 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCchhh
Confidence 356889999999999999999999987544433
No 256
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.90 E-value=2.4e+02 Score=24.65 Aligned_cols=28 Identities=7% Similarity=0.208 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhccc
Q 003127 786 KNYVFVAVLTCTVLFQIIIIELLGTFAN 813 (845)
Q Consensus 786 ~n~~~~~~~~~~~~~~~~~v~~~~~~f~ 813 (845)
++..++..+..++++.++.-.++|.+++
T Consensus 40 ~~l~~~g~IG~~~v~pil~G~~lG~WLD 67 (100)
T TIGR02230 40 EGLGMFGLIGWSVAIPTLLGVAVGIWLD 67 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555554444445555544
No 257
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=26.73 E-value=3.8e+02 Score=25.84 Aligned_cols=105 Identities=14% Similarity=0.023 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH--HH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK--HT 567 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K--~~ 567 (845)
++..++++.+.+++.-.++-.|.+...|..++.++.-.......+......... -.++.++...+.+.+ .+
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~-------~~Dv~I~iS~sG~t~~~i~ 90 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVGETTTPSIK-------KGDLLIAISGSGETESLVT 90 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEEEeCCcccCCCC-------CCCEEEEEeCCCCcHHHHH
Confidence 345678888888886677777888888888888774433222222211100000 123334444454444 57
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
+++..+++ |..++.+-|.. +.|+-+.||+.+.+.
T Consensus 91 ~~~~ak~~-g~~ii~IT~~~-~s~la~~ad~~l~~~ 124 (179)
T TIGR03127 91 VAKKAKEI-GATVAAITTNP-ESTLGKLADVVVEIP 124 (179)
T ss_pred HHHHHHHC-CCeEEEEECCC-CCchHHhCCEEEEeC
Confidence 77778877 75554444332 257778899988776
No 258
>PRK04980 hypothetical protein; Provisional
Probab=26.62 E-value=1.5e+02 Score=25.90 Aligned_cols=56 Identities=14% Similarity=0.096 Sum_probs=37.9
Q ss_pred cCCeeEEEECCeEEEEecCCcCCCcEEEEc--CCCeeeccEEEEeeCceeEe-----cccCCCCCCcc
Q 003127 63 KKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLIN-----ESSLTGESEPV 123 (845)
Q Consensus 63 ~~~~~~V~r~g~~~~i~~~~l~~GDii~l~--~G~~iPaD~~ll~~~~~~Vd-----es~LtGEs~p~ 123 (845)
+.+|..-+||+. ....+|||++.+. .+++.-|+..+++-.-...| .+...|+|.+.
T Consensus 17 sGkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~e 79 (102)
T PRK04980 17 AGRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPE 79 (102)
T ss_pred cCCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHH
Confidence 344555567753 4579999999998 88899999999997532222 24445665443
No 259
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=26.20 E-value=60 Score=30.98 Aligned_cols=25 Identities=28% Similarity=0.488 Sum_probs=21.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGD 512 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd 512 (845)
+.++++++|+++++.|++++++|--
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCc
Confidence 4567999999999999999999943
No 260
>PLN02591 tryptophan synthase
Probab=25.72 E-value=4.6e+02 Score=27.19 Aligned_cols=96 Identities=21% Similarity=0.224 Sum_probs=52.6
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEc-CCC-HHHHHHHHHHcC-CccCCceeeeCcccccCCHHHHhhhcCCeeEE-EE-e
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVT-GDN-INTAKAIARECG-ILTDNGIAIEGPEFREKSDEELSKLIPKIQVM-AR-S 560 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~T-Gd~-~~ta~~ia~~lg-i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~-~~-~ 560 (845)
|=+-++..+..+.+++.|+..+.+- -.. .+..+.+++... ... +++-.- +- .+ .
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY----~Vs~~G-----------------vTG~~~~ 172 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY----LVSSTG-----------------VTGARAS 172 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE----EeeCCC-----------------CcCCCcC
Confidence 3344777788888888888744443 444 345666666542 210 100000 00 01 1
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCcc---CHHHHHhC-CeeEEeC
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTN---DAPALHEA-DIGLAMG 603 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~N---D~~ml~~A-~vgIamg 603 (845)
.|.+-...++.+++. ...-.++|=|.+ |+..+... -=|+-+|
T Consensus 173 ~~~~~~~~i~~vk~~-~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 173 VSGRVESLLQELKEV-TDKPVAVGFGISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred CchhHHHHHHHHHhc-CCCceEEeCCCCCHHHHHHHHhcCCCEEEEC
Confidence 245566778888876 455556699988 55555443 3355556
No 261
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.92 E-value=64 Score=29.03 Aligned_cols=31 Identities=16% Similarity=0.104 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTA 517 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 517 (845)
.-.+++.++++.+|+.|.+++.+|+......
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (120)
T cd05710 58 GNTKETVAAAKFAKEKGATVIGLTDDEDSPL 88 (120)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEECCCCCcH
Confidence 3568899999999999999999999876443
No 262
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.69 E-value=2.2e+02 Score=29.31 Aligned_cols=135 Identities=14% Similarity=0.165 Sum_probs=73.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-cccccC-----CHHHHhhhcCCeeEEEEeC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREK-----SDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g-~~~~~~-----~~~~~~~~~~~~~v~~~~~ 561 (845)
+|+++.+..+.|++.+|++.++|..--.....+.++.....++..+++. .++.+. ..+.+.. .|.+.+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lih------tfnkn~ 212 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIH------TFNKNS 212 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHH------HHccch
Confidence 6889999999999999999999988777777777766554444322211 011100 0111111 122221
Q ss_pred hhcHHHHHHHHHhh-cCCEEEEEcCCccCHHHHHhC-Ce----eEEeCCCCcHH----HHhccCEEeccCChhHHHHH
Q 003127 562 PMDKHTLVKHLRTT-LGEVVAVTGDGTNDAPALHEA-DI----GLAMGIAGTEV----AKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 562 p~~K~~~v~~l~~~-~g~~v~~~GDg~ND~~ml~~A-~v----gIamg~~~~~~----ak~~ad~v~~~~~~~~i~~~ 629 (845)
..-+. --+.+... -+..|...||+.-|+.|-.-+ ++ -|..++..-|+ -++.-|+++.+|....++.-
T Consensus 213 ~v~~~-~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~s 289 (298)
T KOG3128|consen 213 SVLQN-ESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVANS 289 (298)
T ss_pred HHHHh-hhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhHH
Confidence 11110 01111111 134677779999999886532 11 11123112222 45678999988876666543
No 263
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=24.62 E-value=1.6e+02 Score=24.80 Aligned_cols=49 Identities=20% Similarity=0.214 Sum_probs=38.6
Q ss_pred EEeeecC---CCChhHHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCCcc
Q 003127 480 GIVGIKD---PMRPGVKESVAICRSAGITVRMV-TGDNINTAKAIARECGILT 528 (845)
Q Consensus 480 G~~~~~d---~l~~~~~~~I~~l~~~Gi~v~~~-TGd~~~ta~~ia~~lgi~~ 528 (845)
.++.+.+ ...+-+.+..++|+++|+++.+- ++++...-..-|...|+.-
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 3455566 67778899999999999998888 6667778888888888753
No 264
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=24.04 E-value=1.5e+03 Score=28.46 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCc
Q 003127 31 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS 108 (845)
Q Consensus 31 ~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~ 108 (845)
+.-.+.+++++++++...++++++.++.-+........ +. .+ ++-|....+...|.+|-|.++++..+
T Consensus 36 ~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~-----~~-~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd 103 (917)
T TIGR01116 36 FVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESE-----HA-KV----LRDGRWSVIKAKDLVPGDIVELAVGD 103 (917)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----ce-EE----EECCEEEEEEHHHCCCCCEEEECCCC
Confidence 33445566777778877888887777665556542211 11 11 23488899999999999999999654
No 265
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.95 E-value=51 Score=24.96 Aligned_cols=12 Identities=42% Similarity=0.579 Sum_probs=10.2
Q ss_pred CCCcEEEEcCCC
Q 003127 84 LPGDIVHLCMGD 95 (845)
Q Consensus 84 ~~GDii~l~~G~ 95 (845)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 266
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.40 E-value=7.3e+02 Score=26.15 Aligned_cols=168 Identities=15% Similarity=0.164 Sum_probs=88.0
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh--hHHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~--~~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++.+.+.++++..+|.+.-. ++.+-..|.... .+..-.+.+++.|+++..
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~-----------------------Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPK-----------------------IASILVGNDGGSIYYMNNQEKVANSLGIDFKK 66 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCce-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3445566777777777666643222 233444444443 345678889999999765
Q ss_pred E--cCC-CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcHH
Q 003127 509 V--TGD-NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~--TGd-~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K~ 566 (845)
. ..+ ..+.....-++++=+..- ++.+.-+--...+++.+.+.+ .....|.-|+|..=.
T Consensus 67 ~~l~~~~~~~el~~~I~~lN~d~~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~ 146 (278)
T PRK14172 67 IKLDESISEEDLINEIEELNKDNNVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVI 146 (278)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHH
Confidence 4 333 244455555666544332 233322211233333332222 122234556776666
Q ss_pred HHHHHHHhh-cCCEEEEEcCCccC----HHHHHhCCeeEEeCCCCcH---HHHhccCEEeccC
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTND----APALHEADIGLAMGIAGTE---VAKESADVIILDD 621 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~ND----~~ml~~A~vgIamg~~~~~---~ak~~ad~v~~~~ 621 (845)
++++...-. .|+.++++|.|..= ..||...|.-|.+-.+-+. ..-..||+++..-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAv 209 (278)
T PRK14172 147 TLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAI 209 (278)
T ss_pred HHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcC
Confidence 666665432 26899999988552 3355555555544322222 2345689887643
No 267
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=23.03 E-value=1e+02 Score=23.53 Aligned_cols=25 Identities=24% Similarity=0.319 Sum_probs=18.6
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
++-.+.++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 5678999999999999999886543
No 268
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=22.94 E-value=87 Score=26.61 Aligned_cols=26 Identities=27% Similarity=0.249 Sum_probs=19.7
Q ss_pred eEEEECCeEEEEecCCcCCCcEEEEc
Q 003127 67 VQVARNGFRRKISIYDLLPGDIVHLC 92 (845)
Q Consensus 67 ~~V~r~g~~~~i~~~~l~~GDii~l~ 92 (845)
..+.++|+.+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34455666678899999999999864
No 269
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.87 E-value=9.2e+02 Score=25.50 Aligned_cols=166 Identities=16% Similarity=0.210 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++..+|.+. . ++.+-..|..... +...++.+++.|+++..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 65 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKP-G-----------------------LAVVLVGDNQASRTYVRNKQKRTEEAGMKSVL 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677777777776666432 2 3444445544443 36778888999998654
Q ss_pred --EcCCC-HHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcHH
Q 003127 509 --VTGDN-INTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 566 (845)
Q Consensus 509 --~TGd~-~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K~ 566 (845)
+..+. .+...+.-++++=+..- ++++.-+--..+++.++.+.+ ....-|.-|+|..=.
T Consensus 66 ~~l~~~~~~~el~~~I~~lN~D~~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~~~~~~~PcTp~avi 145 (284)
T PRK14170 66 IELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGII 145 (284)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhCCCCCCCCCCHHHHH
Confidence 33332 34455666666544332 233322222233333332222 111224456666555
Q ss_pred HHHHHHHhh-cCCEEEEEcCCccC----HHHHHh--CCeeEEeCCCCcH--HHHhccCEEeccC
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE--VAKESADVIILDD 621 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~ND----~~ml~~--A~vgIamg~~~~~--~ak~~ad~v~~~~ 621 (845)
++++..... .|+.++++|-|..= +.||.. |-|-++-. ...+ ..-..||+++..-
T Consensus 146 ~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs-~T~~l~~~~~~ADIvI~Av 208 (284)
T PRK14170 146 ELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHS-RTKDLPQVAKEADILVVAT 208 (284)
T ss_pred HHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-CCCCHHHHHhhCCEEEEec
Confidence 666554422 26899999988541 224443 44444443 2222 2346689887643
No 270
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=22.45 E-value=1.9e+02 Score=30.71 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLV 569 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 569 (845)
++..+.++.+.+.|++-+++=|-.+..-+ .+.|- ...+.+.+-...-..+++.+++..+++.+--
T Consensus 54 d~l~~~v~~~~~~Gi~~v~lFgv~~~~~K---D~~gs-----~A~~~~g~v~~air~iK~~~p~l~vi~DVcl------- 118 (320)
T cd04823 54 DELLKEAEEAVDLGIPAVALFPVTPPELK---SEDGS-----EAYNPDNLVCRAIRAIKEAFPELGIITDVAL------- 118 (320)
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCcccC---Ccccc-----cccCCCChHHHHHHHHHHhCCCcEEEEeeec-------
Confidence 66788899999999999888765211100 00000 0010011111111223333344444433210
Q ss_pred HHHHhhcCCEEEEEcCC--ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 570 KHLRTTLGEVVAVTGDG--TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 570 ~~l~~~~g~~v~~~GDg--~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
...-.+ |+. ..+.|| .||...=.-|...++ .|+.-||+|-.++=.+|-+.+|++
T Consensus 119 c~YT~h-GHc-Gil~~~~idND~Tl~~L~~~Avs-------~A~AGADiVAPSdMMDGrV~aIR~ 174 (320)
T cd04823 119 DPYTSH-GHD-GIVRDGGILNDETVEVLCKQALV-------QAEAGADIVAPSDMMDGRIGAIRE 174 (320)
T ss_pred cCCCCC-Ccc-eeccCCcCcCHHHHHHHHHHHHH-------HHHhCCCEEEcccchhhHHHHHHH
Confidence 000111 322 222333 477665555544442 357789999999999988877754
No 271
>COG4996 Predicted phosphatase [General function prediction only]
Probab=22.23 E-value=1.4e+02 Score=27.25 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=40.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
+-.+.+++++.++.+|+.|.-+..+|-..+..|....+.+++..
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~ 82 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQ 82 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhh
Confidence 34588999999999999999999999999999999999999875
No 272
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.20 E-value=1.6e+02 Score=26.48 Aligned_cols=55 Identities=16% Similarity=0.195 Sum_probs=41.1
Q ss_pred CceEEEEEeeecCCCChhHHHHHHHHHHcCC-E-EEEEcCCCHHHHHHHHHHcCCcc
Q 003127 474 EGYTCIGIVGIKDPMRPGVKESVAICRSAGI-T-VRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 474 ~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi-~-v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
.+-.++++-.......+.+++.++.|+++|. + .+++-|..+..-.+..++.|++.
T Consensus 49 ~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~ 105 (122)
T cd02071 49 EDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAE 105 (122)
T ss_pred cCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCE
Confidence 3455677777777888889999999999977 3 46677777666667777899763
No 273
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=22.03 E-value=4.7e+02 Score=27.54 Aligned_cols=135 Identities=13% Similarity=0.192 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhhchhhhheeeecCCCC-------CCCC------------C-CCCCceEEEEEeeecCCCChhHHHHH
Q 003127 437 NHLNETIEKFASEALRTLCLACMEIGNEF-------SADA------------P-IPTEGYTCIGIVGIKDPMRPGVKESV 496 (845)
Q Consensus 437 ~~~~~~~~~~~~~G~r~l~~a~~~i~~~~-------~~~~------------~-~~e~~~~~lG~~~~~d~l~~~~~~~I 496 (845)
.+..+..++++++|+.++.++.+.-++-. +... . ...+++.++--+. --.+++.+.+
T Consensus 101 tKvh~~v~~~~~~G~~iIliG~~gHpEv~Gt~Gq~~~~~~~lve~~~d~~~l~~~~~~~l~~~tQTT---ls~ddt~~Iv 177 (294)
T COG0761 101 TKVHKEVERYAREGYEIILIGHKGHPEVIGTMGQYPEGGVLLVESVEDVANLKVQLPDKLAFVTQTT---LSVDDTAEIV 177 (294)
T ss_pred hHHHHHHHHHHhCCCEEEEEccCCCCceeeeccccCCCceEEEecHHHHHhcccCCcccEEEEeeee---cCHHHHHHHH
Confidence 45778899999999999999987655420 0000 0 0111233333332 2345666777
Q ss_pred HHHHHcCC--------EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHH
Q 003127 497 AICRSAGI--------TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 568 (845)
Q Consensus 497 ~~l~~~Gi--------~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 568 (845)
+.|++.=- .++.+|-.....++.+|.++.+.- |.......+-.++
T Consensus 178 ~~l~~r~p~~~~~~~~~ICyAT~nRQ~Avk~la~~~Dl~i---------------------------VVG~~nSSNs~rL 230 (294)
T COG0761 178 AALKERFPKIEVPPFNDICYATQNRQDAVKELAPEVDLVI---------------------------VVGSKNSSNSNRL 230 (294)
T ss_pred HHHHHhCccccCCcccccchhhhhHHHHHHHHhhcCCEEE---------------------------EECCCCCccHHHH
Confidence 77665532 166666667777777777666541 3333334455556
Q ss_pred HHHHHhhcCCEEEEEcCCccCH--HHHHh-CCeeEEeC
Q 003127 569 VKHLRTTLGEVVAVTGDGTNDA--PALHE-ADIGLAMG 603 (845)
Q Consensus 569 v~~l~~~~g~~v~~~GDg~ND~--~ml~~-A~vgIamg 603 (845)
.+.-++. |.....+ |...|+ +-++. -.+||.-|
T Consensus 231 ~eiA~~~-g~~aylI-d~~~ei~~~w~~~~~~VGvTAG 266 (294)
T COG0761 231 AEIAKRH-GKPAYLI-DDAEEIDPEWLKGVKTVGVTAG 266 (294)
T ss_pred HHHHHHh-CCCeEEe-CChHhCCHHHhcCccEEEEecC
Confidence 6666666 6544444 444443 34443 56888877
No 274
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=21.90 E-value=2.5e+02 Score=30.21 Aligned_cols=92 Identities=25% Similarity=0.313 Sum_probs=58.4
Q ss_pred HHHHHHHHHcCCE---EEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 493 KESVAICRSAGIT---VRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 493 ~~~I~~l~~~Gi~---v~~~TGd~~~---ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.-.|-.|-..||= =+=+|+|+.+ .+..+.+.+|+......+++-+ -|.|+. -+-.
T Consensus 213 aigig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCP------------------tCGR~~-~dl~ 273 (346)
T TIGR00612 213 SAGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACP------------------SCGRTG-FDVE 273 (346)
T ss_pred HHHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECC------------------CCCCcC-CCHH
Confidence 3456677777763 2346888854 5678899999976544444332 233432 2333
Q ss_pred HHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 567 TLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 567 ~~v~~l~~~~-----g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+++.+.+++ +-.|+..|=-.|--.--+.||+|||-|
T Consensus 274 ~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 274 KVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 3333333221 247888899999999999999999966
No 275
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=21.57 E-value=2.7e+02 Score=27.15 Aligned_cols=98 Identities=14% Similarity=0.257 Sum_probs=55.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCC---eeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK---IQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~---~~v~~~~~ 561 (845)
.-++-|++.++|++-++.|+++.+-|..+...-+-+- |-.. .-++..++.. ..+-....
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~F---ghs~---------------agdL~~lfsGyfDttiG~KrE 162 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFF---GHSD---------------AGDLNSLFSGYFDTTIGKKRE 162 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhh---cccc---------------cccHHhhhcceeecccccccc
Confidence 5688999999999999999999998877653222111 1100 0011111111 00111111
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
...-.+|.+.+... ...+++..|..+.+.+-+ ++|++.+
T Consensus 163 ~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~--~vGl~t~ 201 (229)
T COG4229 163 SQSYAKIAGDIGLP-PAEILFLSDNPEELKAAA--GVGLATG 201 (229)
T ss_pred chhHHHHHHhcCCC-chheEEecCCHHHHHHHH--hcchhee
Confidence 12335666666544 578999999888777755 4555444
No 276
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=21.21 E-value=1.1e+02 Score=24.90 Aligned_cols=26 Identities=27% Similarity=0.188 Sum_probs=23.1
Q ss_pred EEEECCeEEEEecCCcCCCcEEEEcC
Q 003127 68 QVARNGFRRKISIYDLLPGDIVHLCM 93 (845)
Q Consensus 68 ~V~r~g~~~~i~~~~l~~GDii~l~~ 93 (845)
.|..||+.+.-.-..|..||+|.+..
T Consensus 38 ~V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 38 EVKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred eEEECCeeeeccCCEeecCCEEEECC
Confidence 67789999999999999999998864
No 277
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=21.07 E-value=1.7e+02 Score=27.07 Aligned_cols=37 Identities=19% Similarity=0.140 Sum_probs=32.9
Q ss_pred ceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcC
Q 003127 475 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 511 (845)
Q Consensus 475 ~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TG 511 (845)
+..-++++|+.+++...+-..-+.|+++|++|+-+--
T Consensus 15 ~~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 15 SAKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred hCceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 3456889999999999999999999999999999865
No 278
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=21.02 E-value=3.7e+02 Score=28.87 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.0
Q ss_pred CceEEEEEeeecCCCChhHHHHHHHHHHc---CCEEEEEcCCCHHHHHHHHHH
Q 003127 474 EGYTCIGIVGIKDPMRPGVKESVAICRSA---GITVRMVTGDNINTAKAIARE 523 (845)
Q Consensus 474 ~~~~~lG~~~~~d~l~~~~~~~I~~l~~~---Gi~v~~~TGd~~~ta~~ia~~ 523 (845)
.|+.=+=.++=+..+.|+..++++.+++. |..+...+-|++..+++++.-
T Consensus 165 ~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 165 WDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 45555556665566889999999999988 999988888999999888764
No 279
>PF01479 S4: S4 domain; InterPro: IPR002942 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterised, small proteins that may be involved in translation regulation []. The S4 domain probably mediates binding to RNA.; GO: 0003723 RNA binding; PDB: 3BBU_A 1DM9_B 2K6P_A 3U5G_E 3U5C_E 3IZB_D 2XZM_D 2XZN_D 3O30_E 3O2Z_E ....
Probab=21.00 E-value=81 Score=22.89 Aligned_cols=21 Identities=38% Similarity=0.491 Sum_probs=17.7
Q ss_pred EEECCeEEEEecCCcCCCcEE
Q 003127 69 VARNGFRRKISIYDLLPGDIV 89 (845)
Q Consensus 69 V~r~g~~~~i~~~~l~~GDii 89 (845)
|.-||+..+-+...+.+||+|
T Consensus 28 V~VNg~~v~~~~~~v~~~d~I 48 (48)
T PF01479_consen 28 VKVNGKVVKDPSYIVKPGDVI 48 (48)
T ss_dssp EEETTEEESSTTSBESTTEEE
T ss_pred EEECCEEEcCCCCCCCCcCCC
Confidence 344999998899999999986
No 280
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.80 E-value=1e+03 Score=25.32 Aligned_cols=165 Identities=18% Similarity=0.195 Sum_probs=87.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++...|.+. -++.+-..|..... +....+.+++.|+++-+
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P------------------------~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 65 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTP------------------------GLATVLMSDDPASETYVSMKQRDCEEVGIEAID 65 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677777777776666432 23444445554443 36778888999998755
Q ss_pred EcC--C-CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcHH
Q 003127 509 VTG--D-NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~TG--d-~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K~ 566 (845)
.-= + ..+.....-++++=+..- ++.+.-+--...++.++.+.+ ....-|.-|+|..=.
T Consensus 66 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi 145 (297)
T PRK14167 66 VEIDPDAPAEELYDTIDELNADEDVHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQ 145 (297)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHH
Confidence 432 2 234455555666544332 222222222233333332222 122234456676666
Q ss_pred HHHHHHHhh-cCCEEEEEcCCcc---CH-HHHHh------CCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTN---DA-PALHE------ADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~N---D~-~ml~~------A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
++++..+-. .|+.++.+|-|.. -+ -||.. |-|-++-. ...+ ..-..||+++..
T Consensus 146 ~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs-~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 146 KLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHS-RTDDLAAKTRRADIVVAA 211 (297)
T ss_pred HHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCC-CCCCHHHHHhhCCEEEEc
Confidence 666665432 2689999998855 22 24443 44555543 2222 245678998864
No 281
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.71 E-value=9.4e+02 Score=25.45 Aligned_cols=165 Identities=14% Similarity=0.192 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChh--HHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~--~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++.+.+.++.+..+|.+. . ++.+-..|..... +....+.+++.|+++..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p-~-----------------------Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~ 66 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTP-K-----------------------LSVILVGNDGASQSYVRSKKKAAEKIGMISEI 66 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34555667777777776666432 2 3344444544433 46778889999998655
Q ss_pred E--cCC-CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhc------------------CCeeEEEEeChhcHH
Q 003127 509 V--TGD-NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~--TGd-~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~------------------~~~~v~~~~~p~~K~ 566 (845)
. ..+ ..+...+.-++++-+... ++.+.-+--...++.++.+.+ .+-..|.-|+|..=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~ 146 (286)
T PRK14175 67 VHLEETATEEEVLNELNRLNNDDSVSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYIDEQTFVPCTPLGIM 146 (286)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcCCCCCCCCcHHHHH
Confidence 4 322 234556666666644332 233332222233333333322 111234456666656
Q ss_pred HHHHHHHhh-cCCEEEEEcCCcc----CHHHHHh--CCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTN----DAPALHE--ADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~N----D~~ml~~--A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
++++...-. .|+.++.+|-|.. =+.||.. |.|-++-. ...+ ..-..||+++..
T Consensus 147 ~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 147 EILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVSA 208 (286)
T ss_pred HHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEEC
Confidence 666655322 2689999999862 2234444 44444432 2222 234668888765
No 282
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.10 E-value=1e+03 Score=25.10 Aligned_cols=165 Identities=15% Similarity=0.199 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh--hHHHHHHHHHHcCCEEEE
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 508 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~--~~~~~I~~l~~~Gi~v~~ 508 (845)
+.++.++++.+.++++..+|.+. -++.+-..|.... .+....+.+++.|+++..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P------------------------~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 66 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVP------------------------GLAVILVGDDPASHSYVRGKKKAAEKVGIYSEL 66 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34455666777777776665432 1333444444433 336778889999999766
Q ss_pred E--cCC-CHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhh------------------hcCCeeEEEEeChhcHH
Q 003127 509 V--TGD-NINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSK------------------LIPKIQVMARSSPMDKH 566 (845)
Q Consensus 509 ~--TGd-~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~------------------~~~~~~v~~~~~p~~K~ 566 (845)
. ..+ ..+.....-++++=+... ++.+.-+--...++..+.+ +..+...|.-|+|..=.
T Consensus 67 ~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~PLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~ 146 (284)
T PRK14190 67 YEFPADITEEELLALIDRLNADPRINGILVQLPLPKHIDEKAVIERISPEKDVDGFHPINVGRMMLGQDTFLPCTPHGIL 146 (284)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccCHhhHHHHhcCCCCCCCCCHHHHH
Confidence 4 333 234455556666544332 2333222222333333222 22222234556776666
Q ss_pred HHHHHHHhh-cCCEEEEEcCCccC----HHHHHh--CCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~ND----~~ml~~--A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
++++...-. .|+.++.+|-+..= +.||.. |-|-++-. ...+ ..-..||+++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs-~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 147 ELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS-KTKNLAELTKQADILIVA 208 (284)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 666665422 26889999987541 224433 44444433 2222 244678888754
Done!