Query         003127
Match_columns 845
No_of_seqs    351 out of 3112
Neff          9.1 
Searched_HMMs 13730
Date          Mon Mar 25 14:15:58 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003127.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003127hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1wpga4 f.33.1.1 (A:1-124,A:24 100.0   1E-30 7.5E-35  293.8  31.7  184  659-843   254-466 (472)
  2 d1wpga2 c.108.1.7 (A:344-360,A 100.0 1.2E-29   9E-34  241.1  15.3  146  486-633    19-168 (168)
  3 d1q3ia_ d.220.1.1 (A:) Sodium/ 100.0 3.4E-28 2.5E-32  243.1  20.4  199  292-491     1-213 (214)
  4 d2b8ea1 c.108.1.7 (A:416-434,A  99.9 2.7E-26   2E-30  208.8  11.4  125  477-631    11-135 (135)
  5 d1wpga1 b.82.7.1 (A:125-239) C  99.9 6.6E-25 4.8E-29  192.3   9.4   98   66-163     2-115 (115)
  6 d1qyia_ c.108.1.13 (A:) Hypoth  99.9 9.7E-30   7E-34  277.7 -28.4  322  269-630    31-373 (380)
  7 d1wpga3 d.220.1.1 (A:361-599)   99.9 1.9E-22 1.4E-26  204.8  14.6  161  323-484    48-239 (239)
  8 d1wr8a_ c.108.1.10 (A:) Phosph  99.5 1.9E-14 1.4E-18  144.4  14.2  146  486-633    18-223 (230)
  9 d1rkqa_ c.108.1.10 (A:) Hypoth  99.5 1.1E-14 7.7E-19  150.6  11.6  146  485-631    19-266 (271)
 10 d1l6ra_ c.108.1.10 (A:) Phosph  99.5 7.3E-14 5.3E-18  140.0  13.9  147  485-632    18-221 (225)
 11 d1nrwa_ c.108.1.10 (A:) Hypoth  99.5   6E-14 4.4E-18  145.9  13.5   69  563-632   212-283 (285)
 12 d1rlma_ c.108.1.10 (A:) Sugar   99.5 2.7E-14   2E-18  147.3  10.4   68  563-631   189-259 (269)
 13 d2rbka1 c.108.1.10 (A:2-261) S  99.4 6.4E-14 4.6E-18  143.8   9.4   69  563-632   185-256 (260)
 14 d1nf2a_ c.108.1.10 (A:) Hypoth  99.4 2.7E-13 1.9E-17  139.6  11.3   68  563-631   189-259 (267)
 15 d2b30a1 c.108.1.10 (A:18-300)   99.4 3.2E-13 2.3E-17  140.0  11.3   68  563-631   206-277 (283)
 16 d1k1ea_ c.108.1.5 (A:) Probabl  99.3 4.2E-12 3.1E-16  120.4  11.7  107  494-630    39-149 (177)
 17 d1s2oa1 c.108.1.10 (A:1-244) S  99.2 1.8E-11 1.3E-15  123.7  12.2  141  491-632    22-239 (244)
 18 d1wzca1 c.108.1.10 (A:1-243) P  99.2 1.9E-11 1.4E-15  123.1   8.3  132  485-617    15-235 (243)
 19 d1nnla_ c.108.1.4 (A:) Phospho  99.1 6.9E-11   5E-15  116.9   9.6  124  487-620    82-211 (217)
 20 d1j97a_ c.108.1.4 (A:) Phospho  99.0 3.5E-10 2.6E-14  110.6   9.5  131  486-630    74-209 (210)
 21 d1xvia_ c.108.1.10 (A:) Putati  99.0 1.5E-09 1.1E-13  107.9  12.6   43  486-528    20-62  (232)
 22 d1rkua_ c.108.1.11 (A:) Homose  99.0   2E-09 1.5E-13  104.7  12.9  130  487-632    69-198 (206)
 23 d2feaa1 c.108.1.20 (A:2-227) 2  98.9 8.1E-10 5.9E-14  109.7   9.0  143  487-638    75-221 (226)
 24 d2fuea1 c.108.1.10 (A:13-256)   98.7 1.1E-09 7.9E-14  109.5   1.7   55  563-618   184-243 (244)
 25 d1u02a_ c.108.1.15 (A:) Trehal  98.7 3.1E-08 2.3E-12   97.8  10.7   62  563-631   158-219 (229)
 26 d2amya1 c.108.1.10 (A:4-246) P  98.1 2.7E-07   2E-11   91.5   2.0   52  563-616   184-240 (243)
 27 d2hcfa1 c.108.1.6 (A:2-229) Hy  97.9   1E-05 7.4E-10   79.3   8.2  127  487-631    91-224 (228)
 28 d1te2a_ c.108.1.6 (A:) Phospha  97.8 1.1E-05 8.1E-10   78.3   7.3  117  487-620    88-207 (218)
 29 d2hsza1 c.108.1.6 (A:1-224) Ph  97.8 1.2E-05   9E-10   78.1   7.5  124  487-629    95-222 (224)
 30 d1swva_ c.108.1.3 (A:) Phospho  97.7 2.3E-05 1.7E-09   78.2   8.1   97  487-599    99-196 (257)
 31 d2ah5a1 c.108.1.6 (A:1-210) pr  97.6 5.6E-05 4.1E-09   72.6   7.8  118  487-629    84-208 (210)
 32 d2bdua1 c.108.1.21 (A:7-297) C  97.5 9.7E-05   7E-09   74.3   9.3  131  487-629   135-285 (291)
 33 d2gmwa1 c.108.1.19 (A:24-205)   97.4 0.00017 1.2E-08   67.6   8.7  136  487-631    27-181 (182)
 34 d1x42a1 c.108.1.1 (A:1-230) Hy  97.4 0.00021 1.5E-08   69.6   9.3  126  487-632   100-228 (230)
 35 d2go7a1 c.108.1.6 (A:3-206) Hy  97.2 0.00013 9.7E-09   69.5   5.8  118  487-629    82-200 (204)
 36 d1zs9a1 c.108.1.22 (A:4-256) E  97.0 0.00035 2.6E-08   68.4   7.0  118  486-620   126-248 (253)
 37 d2hdoa1 c.108.1.6 (A:1-207) Ph  97.0 0.00012 9.1E-09   70.0   3.3  120  487-627    82-204 (207)
 38 d2fi1a1 c.108.1.3 (A:4-190) Pu  97.0 0.00067 4.9E-08   63.5   8.4  109  487-616    79-187 (187)
 39 d1u7pa_ c.108.1.17 (A:) Magnes  97.0 0.00085 6.2E-08   61.4   8.2   90  487-600    46-138 (164)
 40 d1ltqa1 c.108.1.9 (A:153-301)   96.9  0.0012 8.7E-08   59.1   9.1  100  485-600    34-141 (149)
 41 d1yv9a1 c.108.1.14 (A:4-256) P  96.9 0.00019 1.4E-08   71.2   3.4   39  486-524    17-55  (253)
 42 d1vjra_ c.108.1.14 (A:) Hypoth  96.7  0.0019 1.4E-07   63.9   9.4   46  485-530    21-69  (261)
 43 d2gfha1 c.108.1.6 (A:1-247) N-  96.6  0.0039 2.9E-07   60.7  10.6  126  487-632   109-239 (247)
 44 d2c4na1 c.108.1.14 (A:1-250) N  96.4 0.00058 4.2E-08   67.4   3.1   50  481-530    13-65  (250)
 45 d1zrna_ c.108.1.1 (A:) L-2-Hal  96.4  0.0017 1.2E-07   62.1   6.3  123  487-628    93-218 (220)
 46 d1o08a_ c.108.1.6 (A:) beta-Ph  96.3  0.0019 1.4E-07   61.9   6.0  113  486-620    90-203 (221)
 47 d2o2xa1 c.108.1.19 (A:8-216) H  96.2  0.0037 2.7E-07   59.4   7.2  135  487-631    48-199 (209)
 48 d2a29a1 d.220.1.1 (A:316-451)   96.2  0.0081 5.9E-07   52.6   8.8  107  351-489    29-135 (136)
 49 d1wvia_ c.108.1.14 (A:) Putati  95.9  0.0053 3.8E-07   60.2   6.9   53  566-620   187-247 (253)
 50 d1y8aa1 c.108.1.24 (A:1-308) H  95.7   0.013 9.1E-07   54.8   8.2  139  487-631    81-255 (308)
 51 d2b82a1 c.108.1.12 (A:4-212) C  95.6  0.0049 3.6E-07   57.5   4.9   88  488-601    87-181 (209)
 52 d1cr6a1 c.108.1.2 (A:4-225) Ep  95.2  0.0068 4.9E-07   57.7   4.7  105  487-609    97-206 (222)
 53 d2fpwa1 c.108.1.19 (A:3-163) H  94.9  0.0043 3.1E-07   56.2   2.1  100  487-600    30-144 (161)
 54 d1qq5a_ c.108.1.1 (A:) L-2-Hal  94.2   0.052 3.8E-06   52.0   8.7   95  487-600    93-187 (245)
 55 d2fdra1 c.108.1.6 (A:3-224) Hy  94.1   0.024 1.7E-06   53.7   5.6  123  487-630    85-217 (222)
 56 d1zd3a1 c.108.1.2 (A:2-224) Ep  93.6   0.031 2.2E-06   52.6   5.5  100  487-603    99-203 (225)
 57 d2b0ca1 c.108.1.2 (A:8-204) Pu  89.4   0.011 7.9E-07   54.5  -3.4   93  487-603    84-185 (197)
 58 d2obba1 c.108.1.25 (A:1-122) H  79.9     1.1 7.9E-05   37.4   5.3   34  486-519    20-53  (122)
 59 d1xpja_ c.108.1.18 (A:) Hypoth  64.3     3.6 0.00026   34.1   4.8   27  487-513    24-50  (124)
 60 d1vioa2 d.66.1.5 (A:0-57) Pseu  62.1     1.7 0.00013   30.7   2.0   38   58-98     19-56  (58)
 61 d1dm9a_ d.66.1.3 (A:) Heat sho  49.9     3.8 0.00027   32.7   2.3   32   62-96     27-58  (104)
 62 d1wpga2 c.108.1.7 (A:344-360,A  45.4       4 0.00029   35.8   2.0   35  488-523    97-132 (168)
 63 d1c06a_ d.66.1.2 (A:) Ribosoma  44.7     6.5 0.00047   33.9   3.2   27   69-95     78-104 (159)
 64 d2b8ea2 d.220.1.1 (A:435-547)   43.9      20  0.0015   28.6   6.2   85  351-484    26-112 (113)
 65 d2z1ca1 b.40.14.1 (A:2-72) Hyd  35.1      28  0.0021   25.1   5.0   33   64-96     13-48  (71)
 66 d2gy9d1 d.66.1.2 (D:2-205) Rib  34.1     7.3 0.00053   35.1   1.8   33   61-95    115-147 (204)
 67 d1wu7a1 c.51.1.1 (A:330-426) H  33.4      36  0.0026   26.0   5.9   48  481-528     8-56  (97)
 68 d1dgsa2 b.40.4.6 (A:315-400) N  31.1     8.6 0.00063   29.2   1.5   27   78-104    48-75  (86)
 69 d2g80a1 c.108.1.22 (A:17-241)   29.9      10 0.00074   34.0   2.2   35  566-601   166-200 (225)
 70 d2uubd1 d.66.1.2 (D:2-209) Rib  29.9      14   0.001   33.2   2.9   26   69-94    125-150 (208)
 71 d1d7ya2 c.3.1.5 (A:116-236) NA  28.1      55   0.004   26.1   6.4   35   66-106    86-120 (121)
 72 d3d3ra1 b.40.14.1 (A:1-76) Hyd  27.0      37  0.0027   24.9   4.4   33   65-97     17-53  (76)
 73 d1gpja2 c.2.1.7 (A:144-302) Gl  26.4 1.7E+02   0.012   24.3   9.8  116  490-636    34-156 (159)
 74 d1kska3 d.66.1.5 (A:1-59) Pseu  25.9      13 0.00093   25.9   1.6   35   56-92     16-50  (59)
 75 d1dq3a1 b.86.1.2 (A:1-128,A:41  25.5      28  0.0021   29.9   4.3   34   66-99    100-134 (168)
 76 d1y81a1 c.2.1.8 (A:6-121) Hypo  24.8      30  0.0022   27.6   4.0   41  487-527    64-105 (116)
 77 d1yj5a1 c.108.1.9 (A:144-338)   24.2      21  0.0015   31.8   3.1   26  488-513    51-76  (195)
 78 d1iuka_ c.2.1.8 (A:) Hypotheti  22.3      18  0.0013   30.0   2.2   40  488-527    79-119 (136)
 79 d2ftsa2 b.103.1.1 (A:318-498)   21.9      40  0.0029   29.3   4.6   62   80-142    83-151 (181)
 80 d1p9ka_ d.66.1.6 (A:) Hypothet  21.4      12  0.0009   27.9   0.7   28   69-97     48-75  (79)
 81 d2b8ea1 c.108.1.7 (A:416-434,A  21.3      12  0.0009   31.1   0.8   16  276-291     2-17  (135)
 82 d1wr8a_ c.108.1.10 (A:) Phosph  20.5      17  0.0012   32.6   1.7   16  276-291     1-16  (230)
 83 d1nhpa2 c.3.1.5 (A:120-242) NA  20.2   1E+02  0.0076   24.2   6.7   39   64-105    84-122 (123)
 84 d2dsma1 d.372.1.1 (A:1-64) Hyp  20.1      20  0.0014   24.6   1.5   20   78-97     24-43  (64)

No 1  
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.97  E-value=1e-30  Score=293.84  Aligned_cols=184  Identities=23%  Similarity=0.311  Sum_probs=150.2

Q ss_pred             HHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003127          659 FSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRG  738 (845)
Q Consensus       659 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (845)
                      +++.++..+.|+++.|++|+|+++|.+|+++++.|||++++|++||++++++++++.++..++.++++.+...+..++..
T Consensus       254 ~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~  333 (472)
T d1wpga4         254 FLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWW  333 (472)
T ss_dssp             HHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33566788999999999999999999999999999999999999999999999999999999888887766554433222


Q ss_pred             cccccC-----------------CCC---------CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHH
Q 003127          739 KAVFRL-----------------DGP---------DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFV  791 (845)
Q Consensus       739 ~~~~~~-----------------~~~---------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~  791 (845)
                      ..++..                 +..         .....++|++|.+++++|++|.+++|+ .+.++|+ ++++|++++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs-~~~s~~~~~~~~N~~l~  412 (472)
T d1wpga4         334 FMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRMPPWVNIWLL  412 (472)
T ss_dssp             TTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSC-SSCCTTTSCGGGCHHHH
T ss_pred             HHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhc-CCcchhhcCccccHHHH
Confidence            111100                 000         011246899999999999999999995 4556665 778999999


Q ss_pred             HHHHHHHHHHHHH--HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127          792 AVLTCTVLFQIII--IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ  843 (845)
Q Consensus       792 ~~~~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~  843 (845)
                      .++++++++++++  +|+++.+|+++|+++.+|+++++++++.++++|++|++.
T Consensus       413 ~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~  466 (472)
T d1wpga4         413 GSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA  466 (472)
T ss_dssp             HHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999888877544  677899999999999999999999999999999999874


No 2  
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.96  E-value=1.2e-29  Score=241.11  Aligned_cols=146  Identities=46%  Similarity=0.691  Sum_probs=138.8

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce----eeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI----AIEGPEFREKSDEELSKLIPKIQVMARSS  561 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~----~i~g~~~~~~~~~~~~~~~~~~~v~~~~~  561 (845)
                      ||+|++++++|+.||++|++++|+|||+..+|.++|+++|+..++..    .+.|.++......+..+...+..+|+|++
T Consensus        19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~   98 (168)
T d1wpga2          19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE   98 (168)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred             CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence            99999999999999999999999999999999999999999876543    57788888888888888888899999999


Q ss_pred             hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127          562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG  633 (845)
Q Consensus       562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g  633 (845)
                      |++|..+++.+|++ |++|+|+|||.||++||++||+||+|+ ++++.++++||+++.++++..+.++|++|
T Consensus        99 p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G  168 (168)
T d1wpga2          99 PSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG  168 (168)
T ss_dssp             HHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence            99999999999998 999999999999999999999999999 89999999999999999999999999998


No 3  
>d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.96  E-value=3.4e-28  Score=243.07  Aligned_cols=199  Identities=21%  Similarity=0.241  Sum_probs=156.3

Q ss_pred             CeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcC
Q 003127          292 HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLG  367 (845)
Q Consensus       292 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~  367 (845)
                      .|+|+++|++++.++.+.............++..+.+..+..+|+++.+..++.+    .....|||+|.||++++.+.+
T Consensus         1 ~MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~   80 (214)
T d1q3ia_           1 MMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSC   80 (214)
T ss_dssp             CCEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHH
T ss_pred             CeEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhC
Confidence            3899999999999887655444333334455667778888888988877654332    234589999999999999999


Q ss_pred             CChHHhhhhcceEEEecCCCCCceEEEEEEcC--CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHH
Q 003127          368 GDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEK  445 (845)
Q Consensus       368 ~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~--~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (845)
                      .+....+..+++++.+||+|.||+|+++++.+  ++.+++|+|||||.|+++|+.++. +|...|++++.++.+.+.+++
T Consensus        81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~  159 (214)
T d1q3ia_          81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE  159 (214)
T ss_dssp             SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence            99999999999999999999999999999865  456899999999999999998775 788999999999999999999


Q ss_pred             HHHhhchhhhheeeecCCCC--------CCCCCCCCCceEEEEEeeecCCCChh
Q 003127          446 FASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG  491 (845)
Q Consensus       446 ~~~~G~r~l~~a~~~i~~~~--------~~~~~~~e~~~~~lG~~~~~d~l~~~  491 (845)
                      |+.+|+||||+|||+++.+.        .++.+..++|++|+|+++++||+|++
T Consensus       160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~  213 (214)
T d1q3ia_         160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH  213 (214)
T ss_dssp             HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred             HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence            99999999999999998652        12335668999999999999999975


No 4  
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.93  E-value=2.7e-26  Score=208.77  Aligned_cols=125  Identities=41%  Similarity=0.619  Sum_probs=109.4

Q ss_pred             EEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127          477 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV  556 (845)
Q Consensus       477 ~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v  556 (845)
                      +..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++|+..                           +
T Consensus        11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------v   63 (135)
T d2b8ea1          11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------V   63 (135)
T ss_dssp             CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------E
T ss_pred             ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------h
Confidence            3445788999999999999999999999999999999999999999999964                           8


Q ss_pred             EEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127          557 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       557 ~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~  631 (845)
                      +++++|++|..+++.+|+  ++.|+|+|||.||+|||++||+||||+ ++++.++++||+++.++++.++.++|+
T Consensus        64 ~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~  135 (135)
T d2b8ea1          64 IAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ  135 (135)
T ss_dssp             ECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred             ccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence            999999999999999986  468999999999999999999999999 899999999999999999999998863


No 5  
>d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.91  E-value=6.6e-25  Score=192.33  Aligned_cols=98  Identities=35%  Similarity=0.515  Sum_probs=88.8

Q ss_pred             eeEEEECCeE--EEEecCCcCCCcEEEEcCCCeeeccEEEEeeC--ceeEecccCCCCCCcccccC------------CC
Q 003127           66 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN  129 (845)
Q Consensus        66 ~~~V~r~g~~--~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~--~~~Vdes~LtGEs~p~~k~~------------~~  129 (845)
                      .++|+|+|++  ++|+++||+|||+|.+++||+|||||+|+++.  ++.||||+|||||.|+.|..            ..
T Consensus         2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~   81 (115)
T d1wpga1           2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK   81 (115)
T ss_dssp             EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred             ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence            5789999985  78999999999999999999999999999743  48899999999999999852            35


Q ss_pred             CeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127          130 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL  163 (845)
Q Consensus       130 ~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~  163 (845)
                      |++|+||.+.+|+++++|++||.+|.+|||.+++
T Consensus        82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i  115 (115)
T d1wpga1          82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM  115 (115)
T ss_dssp             TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred             ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence            6899999999999999999999999999998753


No 6  
>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}
Probab=99.90  E-value=9.7e-30  Score=277.70  Aligned_cols=322  Identities=12%  Similarity=0.033  Sum_probs=212.4

Q ss_pred             hhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCee-EEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCc
Q 003127          269 AACETMGSATSICSDKTGTLTTNHMTVLKACICEEI-KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNK  347 (845)
Q Consensus       269 ~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  347 (845)
                      .+.|.||...++|+|||||+|.|+|++..+. .+.. ...+.        ...++ ..++. .....|+.+...      
T Consensus        31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-~~~il~~~k~--------~g~n~-~~dl~-~~~~~~~~~~~~------   93 (380)
T d1qyia_          31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-KDKILNKLKS--------LGLNS-NWDML-FIVFSIHLIDIL------   93 (380)
T ss_dssp             HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-TTHHHHHHHH--------TTCCC-HHHHH-HHHHHHHHHHHH------
T ss_pred             hchhhcccceeeecCcccchhhhhheeeeec-chhhhHhhhh--------cCCCh-hHHHH-HHHHHHHHHHHH------
Confidence            4568999999999999999999999874321 1110 00000        00111 12221 111122211111      


Q ss_pred             eEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCc
Q 003127          348 TEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE  427 (845)
Q Consensus       348 ~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~  427 (845)
                       ...++|++.+++...+..+......++.+.....+||++.+|+|++.....++.+..+.+|+++.+             
T Consensus        94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~-------------  159 (380)
T d1qyia_          94 -KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL-------------  159 (380)
T ss_dssp             -TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT-------------
T ss_pred             -hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhc-------------
Confidence             115677888877655443333444556677778899999999998876543333334445555433             


Q ss_pred             eecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCC--hhHHHHHHHHHHcCCE
Q 003127          428 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR--PGVKESVAICRSAGIT  505 (845)
Q Consensus       428 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~--~~~~~~I~~l~~~Gi~  505 (845)
                        .+++..+..+.....+++++|+|++++|++..+.....    ...+....|++..+++++  +++++++++|+++|++
T Consensus       160 --~~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~----~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~  233 (380)
T d1qyia_         160 --HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK----IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFE  233 (380)
T ss_dssp             --TCSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS----CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCE
T ss_pred             --CCcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc----cchhhHhcccccccccccchhhHHHHHHHHHHCCCe
Confidence              12223344566778899999999999999876543211    112233458888888855  5999999999999999


Q ss_pred             EEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHH---------hhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127          506 VRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEEL---------SKLIPKIQVMARSSPMDKHTLVKHLRT  574 (845)
Q Consensus       506 v~~~TGd~~~ta~~ia~~lgi~~~--~~~~i~g~~~~~~~~~~~---------~~~~~~~~v~~~~~p~~K~~~v~~l~~  574 (845)
                      ++|+|||+..++..+++++|+...  ...++++++.........         ...+.....++|.+|.+|..+++.++.
T Consensus       234 v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~  313 (380)
T d1qyia_         234 LGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIV  313 (380)
T ss_dssp             EEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCS
T ss_pred             EEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence            999999999999999999999752  223444433211000000         000111225678999999999999998


Q ss_pred             hcCCEEEEEcCCccCHHHHHhCC---eeEEeCCCCcHHHH----hccCEEeccCChhHHHHHH
Q 003127          575 TLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAK----ESADVIILDDNFSTIVTVA  630 (845)
Q Consensus       575 ~~g~~v~~~GDg~ND~~ml~~A~---vgIamg~~~~~~ak----~~ad~v~~~~~~~~i~~~i  630 (845)
                      . ++.++|+|||.||++|+|+||   +||+||..+++..+    ..||+++.+  +..+.+++
T Consensus       314 ~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~--~~el~~il  373 (380)
T d1qyia_         314 N-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH--LGELRGVL  373 (380)
T ss_dssp             C-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred             C-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC--HHHHHHHH
Confidence            8 899999999999999999999   99999977776544    379999954  77776654


No 7  
>d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=99.87  E-value=1.9e-22  Score=204.75  Aligned_cols=161  Identities=20%  Similarity=0.198  Sum_probs=132.4

Q ss_pred             hHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHHHcCCChHH----------------hhhhcceEEEecC
Q 003127          323 SASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGGDFQA----------------ERQASKIVKVEPF  385 (845)
Q Consensus       323 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~e~al~~~~~~~~~~~~~----------------~~~~~~~l~~~~F  385 (845)
                      +..+.+..+..+||++....++ .+.+...|+|+|.||+.++.+.|.+...                .++.+++++.+||
T Consensus        48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF  127 (239)
T d1wpga3          48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF  127 (239)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred             HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence            3455667778889888877653 4556778999999999999999876432                2467899999999


Q ss_pred             CCCCceEEEEEEcCCC-----eEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHH--HHhhchhhhhee
Q 003127          386 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC  458 (845)
Q Consensus       386 ~s~~k~~sviv~~~~~-----~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~r~l~~a~  458 (845)
                      +|+||||+++++.+++     .+++|+|||||.|+++|+.++. ++...|++++.++.+.+..+++  +++|+|||++||
T Consensus       128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~  206 (239)
T d1wpga3         128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT  206 (239)
T ss_dssp             ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred             cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence            9999999999997654     4789999999999999998765 6778899999999999999987  679999999999


Q ss_pred             eecCCCCCC-------CCCCCCCceEEEEEeee
Q 003127          459 MEIGNEFSA-------DAPIPTEGYTCIGIVGI  484 (845)
Q Consensus       459 ~~i~~~~~~-------~~~~~e~~~~~lG~~~~  484 (845)
                      |+++.+...       ....+|+|++|+|++++
T Consensus       207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi  239 (239)
T d1wpga3         207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM  239 (239)
T ss_dssp             ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred             EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence            999865321       12346889999999986


No 8  
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.54  E-value=1.9e-14  Score=144.39  Aligned_cols=146  Identities=20%  Similarity=0.228  Sum_probs=109.2

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc-------------------------
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR-------------------------  540 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~-------------------------  540 (845)
                      ..+.+.+.++|++|+++|++++++|||+...+..+++.+++..+- ..-+|..+.                         
T Consensus        18 ~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (230)
T d1wr8a_          18 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV-VAEDGGAISYKKKRIFLASMDEEWILWNEIRKRF   96 (230)
T ss_dssp             SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCE-EEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred             CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCccc-ccccceeeeccccccccccccHHHHHHHHHHHhc
Confidence            358899999999999999999999999999999999999886431 000110000                         


Q ss_pred             ---------------------cCCHHHHhh---hc-CC-------eeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcC
Q 003127          541 ---------------------EKSDEELSK---LI-PK-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGD  585 (845)
Q Consensus       541 ---------------------~~~~~~~~~---~~-~~-------~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GD  585 (845)
                                           ....+.+.+   .+ ..       ..+-......+|...++.+.++++   +.++++||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD  176 (230)
T d1wr8a_          97 PNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD  176 (230)
T ss_dssp             TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred             ccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec
Confidence                                 001111111   11 11       112223345789999999887755   57899999


Q ss_pred             CccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127          586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG  633 (845)
Q Consensus       586 g~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g  633 (845)
                      |.||++|++.||+||||+ |+.+.+|+.||+++.+++.+++.+++++.
T Consensus       177 ~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~  223 (230)
T d1wr8a_         177 GENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI  223 (230)
T ss_dssp             SGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred             CccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence            999999999999999999 89999999999999999999999988754


No 9  
>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}
Probab=99.53  E-value=1.1e-14  Score=150.59  Aligned_cols=146  Identities=24%  Similarity=0.330  Sum_probs=108.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccc---------c------------
Q 003127          485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFR---------E------------  541 (845)
Q Consensus       485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i--~g~~~~---------~------------  541 (845)
                      +.++.+++.++|++|+++|++++++|||++..+..+.+++++..+...++  +|..+.         .            
T Consensus        19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~   98 (271)
T d1rkqa_          19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLE   98 (271)
T ss_dssp             TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHH
T ss_pred             CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHH
Confidence            34688999999999999999999999999999999999999876533111  111000         0            


Q ss_pred             ------------------------C------------------------------------CHHHHh---hhcC-----C
Q 003127          542 ------------------------K------------------------------------SDEELS---KLIP-----K  553 (845)
Q Consensus       542 ------------------------~------------------------------------~~~~~~---~~~~-----~  553 (845)
                                              .                                    ..+...   +.+.     .
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  178 (271)
T d1rkqa_          99 KLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK  178 (271)
T ss_dssp             HHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH
T ss_pred             HHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcc
Confidence                                    0                                    000000   0000     0


Q ss_pred             eeE------EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCC
Q 003127          554 IQV------MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN  622 (845)
Q Consensus       554 ~~v------~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~  622 (845)
                      ..+      +....|  .+|+..++.++++++   +.++++|||.||++||+.||+|+||+ |+.+.+|+.||+++.+++
T Consensus       179 ~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~  257 (271)
T d1rkqa_         179 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNL  257 (271)
T ss_dssp             EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTT
T ss_pred             eEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCC
Confidence            111      111223  479999999998765   46889999999999999999999999 999999999999999999


Q ss_pred             hhHHHHHHH
Q 003127          623 FSTIVTVAK  631 (845)
Q Consensus       623 ~~~i~~~i~  631 (845)
                      .+|++++++
T Consensus       258 ~~Gv~~~l~  266 (271)
T d1rkqa_         258 EDGVAFAIE  266 (271)
T ss_dssp             TTHHHHHHH
T ss_pred             cChHHHHHH
Confidence            999999886


No 10 
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.49  E-value=7.3e-14  Score=139.95  Aligned_cols=147  Identities=20%  Similarity=0.201  Sum_probs=108.2

Q ss_pred             cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCcc-c-ccCC--------------
Q 003127          485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPE-F-REKS--------------  543 (845)
Q Consensus       485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~~-~-~~~~--------------  543 (845)
                      +.++.+++.+++++|++.|++++++|||+...+..+++.+|+..+    ++ .+...+. . ....              
T Consensus        18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (225)
T d1l6ra_          18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR   97 (225)
T ss_dssp             TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred             CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence            456889999999999999999999999999999999999998643    11 0111000 0 0000              


Q ss_pred             ------------------------HHHHhhhc--CCeeEE-------EEeChhcHHHHHHHHHhhcC---CEEEEEcCCc
Q 003127          544 ------------------------DEELSKLI--PKIQVM-------ARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT  587 (845)
Q Consensus       544 ------------------------~~~~~~~~--~~~~v~-------~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~  587 (845)
                                              .+.+....  ....++       ......+|+..++.+.+++|   +.++++|||.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~  177 (225)
T d1l6ra_          98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN  177 (225)
T ss_dssp             SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred             cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence                                    00011000  111111       11233689999999987765   5688899999


Q ss_pred             cCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127          588 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       588 ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      ||++|++.||+||||+ |+.+.+|+.||+++..++.+++.+++++
T Consensus       178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~  221 (225)
T d1l6ra_         178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH  221 (225)
T ss_dssp             GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred             chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence            9999999999999999 8999999999999999999999998864


No 11 
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=99.49  E-value=6e-14  Score=145.94  Aligned_cols=69  Identities=32%  Similarity=0.404  Sum_probs=63.6

Q ss_pred             hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      .+|+..++.+.+++|   +.++++|||.||.+||+.||+||||+ ||++.+|+.||+++.+++.+|+.++|++
T Consensus       212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~  283 (285)
T d1nrwa_         212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH  283 (285)
T ss_dssp             CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred             chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence            379999999998876   56899999999999999999999999 9999999999999999999999998864


No 12 
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=99.48  E-value=2.7e-14  Score=147.33  Aligned_cols=68  Identities=28%  Similarity=0.318  Sum_probs=62.9

Q ss_pred             hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~  631 (845)
                      .+|+..++.+++++|   +.++++|||.||++||+.||+||||+ |+.+.+|+.||+++.+++.+|+++.|+
T Consensus       189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~  259 (269)
T d1rlma_         189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ  259 (269)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred             hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence            569999999988866   46889999999999999999999999 899999999999999999999998886


No 13 
>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.44  E-value=6.4e-14  Score=143.75  Aligned_cols=69  Identities=30%  Similarity=0.365  Sum_probs=63.4

Q ss_pred             hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      .+|+..++.+.+++|   +.++++|||.||++||+.||.||||+ ||.+.+|+.||+++.+++.+|+.++|++
T Consensus       185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~  256 (260)
T d2rbka1         185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH  256 (260)
T ss_dssp             CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred             CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence            579999999988766   57888999999999999999999999 9999999999999999999999999865


No 14 
>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}
Probab=99.41  E-value=2.7e-13  Score=139.61  Aligned_cols=68  Identities=32%  Similarity=0.455  Sum_probs=62.6

Q ss_pred             hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~  631 (845)
                      .+|+..++.+.+++|   +.|+++|||.||++||+.||+||||+ ||.+.+|+.||+++.+++.+|++++++
T Consensus       189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~  259 (267)
T d1nf2a_         189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE  259 (267)
T ss_dssp             CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred             CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence            479999999988766   46888899999999999999999999 999999999999999999999999875


No 15 
>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}
Probab=99.40  E-value=3.2e-13  Score=140.04  Aligned_cols=68  Identities=25%  Similarity=0.284  Sum_probs=58.7

Q ss_pred             hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC-ChhHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD-NFSTIVTVAK  631 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~-~~~~i~~~i~  631 (845)
                      ..|+..++.+.+.++   +.++++|||.||.+||+.||+|+||+ ||.+.+|+.||+++.++ +..++.++++
T Consensus       206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~  277 (283)
T d2b30a1         206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK  277 (283)
T ss_dssp             CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred             chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence            579999999888755   57999999999999999999999999 99999999999999755 4455777764


No 16 
>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}
Probab=99.30  E-value=4.2e-12  Score=120.38  Aligned_cols=107  Identities=19%  Similarity=0.252  Sum_probs=91.1

Q ss_pred             HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127          494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR  573 (845)
Q Consensus       494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~  573 (845)
                      .+|+.|++.|+.+.++||+....+...++++++..                           ++.  ...+|...++.+.
T Consensus        39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~   89 (177)
T d1k1ea_          39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM   89 (177)
T ss_dssp             HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred             HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence            48999999999999999999999999999999863                           222  3457877777776


Q ss_pred             hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH-HHHHH
Q 003127          574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST-IVTVA  630 (845)
Q Consensus       574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~-i~~~i  630 (845)
                      ++++   +.|+++||+.||++||+.|++|+||+ ++.+.+|+.||+|+..+.-+| +.+++
T Consensus        90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~  149 (177)
T d1k1ea_          90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMS  149 (177)
T ss_dssp             HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred             HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHH
Confidence            6545   68999999999999999999999999 999999999999999887666 44443


No 17 
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=99.22  E-value=1.8e-11  Score=123.73  Aligned_cols=141  Identities=15%  Similarity=0.153  Sum_probs=100.8

Q ss_pred             hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc---------------CC-----------
Q 003127          491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE---------------KS-----------  543 (845)
Q Consensus       491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i-~g~~~~~---------------~~-----------  543 (845)
                      +..+++.++++.|++++++|||+...+..+.+++++..+...+- +|..+..               ..           
T Consensus        22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (244)
T d1s2oa1          22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF  101 (244)
T ss_dssp             HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence            45566777788999999999999999999999999876532111 1111100               00           


Q ss_pred             -------------------------H---HHHhhh----cCCee--------EEEEeChhcHHHHHHHHHhhcC---CEE
Q 003127          544 -------------------------D---EELSKL----IPKIQ--------VMARSSPMDKHTLVKHLRTTLG---EVV  580 (845)
Q Consensus       544 -------------------------~---~~~~~~----~~~~~--------v~~~~~p~~K~~~v~~l~~~~g---~~v  580 (845)
                                               +   +.+.+.    .....        +-......+|+..++.+.+.+|   +.+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~  181 (244)
T d1s2oa1         102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT  181 (244)
T ss_dssp             TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred             ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence                                     0   001000    01111        1112334689999999998866   568


Q ss_pred             EEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC-------EEeccCChhHHHHHHHH
Q 003127          581 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW  632 (845)
Q Consensus       581 ~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad-------~v~~~~~~~~i~~~i~~  632 (845)
                      +++|||.||.+||+.||.|+||+ |+.+.+|+.||       ++...++.+|+.+++++
T Consensus       182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~  239 (244)
T d1s2oa1         182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH  239 (244)
T ss_dssp             EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred             EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence            88999999999999999999999 99999999888       67778888899998865


No 18 
>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.15  E-value=1.9e-11  Score=123.14  Aligned_cols=132  Identities=15%  Similarity=0.114  Sum_probs=87.6

Q ss_pred             cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCcccc-------------------
Q 003127          485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPEFR-------------------  540 (845)
Q Consensus       485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~~~~-------------------  540 (845)
                      .+...+.++++|++|+++|++++++|||++..+..+.+++++..+    ++ .+.......                   
T Consensus        15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (243)
T d1wzca1          15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGI   94 (243)
T ss_dssp             SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCCC----------CEEEECSC
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhh
Confidence            455678899999999999999999999999999999999998642    11 111100000                   


Q ss_pred             ----------------------cC-----------CHHHHhhhcC----------------------CeeEE------EE
Q 003127          541 ----------------------EK-----------SDEELSKLIP----------------------KIQVM------AR  559 (845)
Q Consensus       541 ----------------------~~-----------~~~~~~~~~~----------------------~~~v~------~~  559 (845)
                                            ..           ..+.......                      ...+.      .-
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (243)
T d1wzca1          95 RVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV  174 (243)
T ss_dssp             CHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSCHHHHHHHTTCEEEECSSSEEE
T ss_pred             hHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHHHHHhhhhcCeEEeecccccch
Confidence                                  00           0000000000                      00000      01


Q ss_pred             eChhcHHHHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEE
Q 003127          560 SSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI  617 (845)
Q Consensus       560 ~~p~~K~~~v~~l~~~~g----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v  617 (845)
                      .....|...++.+.++++    +.++++|||.||++||+.||.||||| |+.+.+++.+|.+
T Consensus       175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i  235 (243)
T d1wzca1         175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI  235 (243)
T ss_dssp             ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCH
T ss_pred             hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeC-CCChHHHhhhhHH
Confidence            122568877777665432    48889999999999999999999999 8888877776654


No 19 
>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10  E-value=6.9e-11  Score=116.94  Aligned_cols=124  Identities=19%  Similarity=0.278  Sum_probs=91.2

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE----eCh
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR----SSP  562 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~----~~p  562 (845)
                      +++|++.+.++.||++|++++++||.....+.++++.+|+...+  ++.. ++......       ...-+..    ..+
T Consensus        82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an-~~~~~~~G-------~~~g~~~~~p~~~~  151 (217)
T d1nnla_          82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN-RLKFYFNG-------EYAGFDETQPTAES  151 (217)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE-CEEECTTS-------CEEEECTTSGGGST
T ss_pred             ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeee-eeeeeehh-------ccccceeeeeeecc
Confidence            46899999999999999999999999999999999999997431  1100 00000000       0000001    235


Q ss_pred             hcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeCCC-CcHHHHhccCEEecc
Q 003127          563 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIA-GTEVAKESADVIILD  620 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg~~-~~~~ak~~ad~v~~~  620 (845)
                      ..|.++++.++++.+ +.++++|||.||++|++.||++||++.+ ..+..++.||+++.+
T Consensus       152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~  211 (217)
T d1nnla_         152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD  211 (217)
T ss_dssp             THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred             chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence            779999999987644 5789999999999999999999999733 345677889999855


No 20 
>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.00  E-value=3.5e-10  Score=110.62  Aligned_cols=131  Identities=18%  Similarity=0.232  Sum_probs=94.2

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE--eChh
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SSPM  563 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~--~~p~  563 (845)
                      .++.+++.+.++.++..|..++++||.....+....++.+....-...+..+...            .......  ..+.
T Consensus        74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~  141 (210)
T d1j97a_          74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------LTGDVEGEVLKEN  141 (210)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------EEEEEECSSCSTT
T ss_pred             hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------ccccccccccccc
Confidence            4678889999999999999999999999999999999888764211111100000            0000000  1223


Q ss_pred             cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127          564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA  630 (845)
Q Consensus       564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i  630 (845)
                      .|...++.+.+.++   +.++++|||.||++|++.||+||||  |+.+..|+.||+++.++++++|.++|
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l  209 (210)
T d1j97a_         142 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI  209 (210)
T ss_dssp             HHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred             cccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence            44555555444322   5688899999999999999999999  58899999999999988899887654


No 21 
>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}
Probab=98.96  E-value=1.5e-09  Score=107.91  Aligned_cols=43  Identities=9%  Similarity=0.050  Sum_probs=39.8

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT  528 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~  528 (845)
                      ..+.+.+++++++|+++|++++++|||+...+..+.+++++..
T Consensus        20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~   62 (232)
T d1xvia_          20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG   62 (232)
T ss_dssp             CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred             CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence            3578899999999999999999999999999999999999863


No 22 
>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.95  E-value=2e-09  Score=104.72  Aligned_cols=130  Identities=17%  Similarity=0.120  Sum_probs=91.8

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      +..++....++.+ +.+.+.+..|+.............+.............            ...........+..+.
T Consensus        69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~  135 (206)
T d1rkua_          69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD------------SDRVVGYQLRQKDPKR  135 (206)
T ss_dssp             CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT------------TSCEEEEECCSSSHHH
T ss_pred             cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeec------------ccccccccccchhhHH
Confidence            3455666666655 57899999999999999999999998643111110000            0011123334455667


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      ..++.++.. .+.|+++|||.||++||+.||+||||+ +..+..++++|+++. ++++++.+.|.+
T Consensus       136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~  198 (206)
T d1rkua_         136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK  198 (206)
T ss_dssp             HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred             HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence            777888777 789999999999999999999999995 666677788899775 457777776644


No 23 
>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}
Probab=98.92  E-value=8.1e-10  Score=109.73  Aligned_cols=143  Identities=13%  Similarity=0.081  Sum_probs=101.9

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC---ceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM  563 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~---~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~  563 (845)
                      ++.|++.+.++.|+++|++++++|+.....+..+.+++|+....   .....+......      ..........+..|.
T Consensus        75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~  148 (226)
T d2feaa1          75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC  148 (226)
T ss_dssp             CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred             chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence            47899999999999999999999999999999999999876421   011111111000      000001122345778


Q ss_pred             cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhc-cCEEeccCChhHHHHHHHHHHHHHH
Q 003127          564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKWGRSVYI  638 (845)
Q Consensus       564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~-ad~v~~~~~~~~i~~~i~~gR~~~~  638 (845)
                      .|..+++.++.. ++.++++||+.||++|+++||+++|++ ...+.+++. .++. .-++++.+...+++-....+
T Consensus       149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~  221 (226)
T d2feaa1         149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQE  221 (226)
T ss_dssp             CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHH
T ss_pred             HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHH
Confidence            899999999877 789999999999999999999999998 555554443 4443 34578888887766544443


No 24 
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.72  E-value=1.1e-09  Score=109.53  Aligned_cols=55  Identities=13%  Similarity=0.244  Sum_probs=48.9

Q ss_pred             hcHHHHHHHHHhhcCCEEEEEcCC----ccCHHHHHhCC-eeEEeCCCCcHHHHhccCEEe
Q 003127          563 MDKHTLVKHLRTTLGEVVAVTGDG----TNDAPALHEAD-IGLAMGIAGTEVAKESADVII  618 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g~~v~~~GDg----~ND~~ml~~A~-vgIamg~~~~~~ak~~ad~v~  618 (845)
                      .+|+..++.|.+...+.|+++||+    .||.+||+.|+ .|+||+ |+.|.+|..+|+++
T Consensus       184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~  243 (244)
T d2fuea1         184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF  243 (244)
T ss_dssp             CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred             ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence            689999999987645789999995    59999999998 799999 99999999999875


No 25 
>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=98.67  E-value=3.1e-08  Score=97.76  Aligned_cols=62  Identities=19%  Similarity=0.382  Sum_probs=46.9

Q ss_pred             hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127          563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~  631 (845)
                      .+|+..++.+.++  +.++++||+.||++||+.|+.|+||+ +|..  +.+|++.+.+  .+.+.++++
T Consensus       158 ~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l~  219 (229)
T d1u02a_         158 VNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKILK  219 (229)
T ss_dssp             CCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred             CCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHHH
Confidence            6899999999876  45678899999999999997766665 3332  5689999865  555655553


No 26 
>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.13  E-value=2.7e-07  Score=91.54  Aligned_cols=52  Identities=21%  Similarity=0.369  Sum_probs=39.4

Q ss_pred             hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhCC-eeEEeCCCCcHHHHhccCE
Q 003127          563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADV  616 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~A~-vgIamg~~~~~~ak~~ad~  616 (845)
                      .+|+..++.|.....+.++++||    |.||++||+.|| .|++|+ + .+.+++.++.
T Consensus       184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~~  240 (243)
T d2amya1         184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICEL  240 (243)
T ss_dssp             CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHHH
T ss_pred             cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHHH
Confidence            68999999887654578999999    789999999998 678776 4 5556665543


No 27 
>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}
Probab=97.88  E-value=1e-05  Score=79.29  Aligned_cols=127  Identities=16%  Similarity=0.183  Sum_probs=83.8

Q ss_pred             CCChhHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127          487 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK  565 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K  565 (845)
                      ++-|++.+.+++|++.| +++.++|+.+...+....+.+|+...-..++.+++....                ...|..-
T Consensus        91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------------k~~p~~~  154 (228)
T d2hcfa1          91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR----------------NELPHIA  154 (228)
T ss_dssp             EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG----------------GGHHHHH
T ss_pred             eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccc----------------cchhHHH
Confidence            34689999999999987 899999999999999999999997643333333221100                0011111


Q ss_pred             HHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHH-HHhccCEEeccCChhHHHHHHH
Q 003127          566 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       566 ~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~-ak~~ad~v~~~~~~~~i~~~i~  631 (845)
                      ...++.+...  ..+.++||||+.+|+.|-+.||+   +|+.|....+. .+..||+++.+  ++.+.++|.
T Consensus       155 ~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~--~~el~~~l~  224 (228)
T d2hcfa1         155 LERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA  224 (228)
T ss_dssp             HHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred             HHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECC--HHHHHHHHH
Confidence            2222333211  12579999999999999999994   45556333333 44468999854  777776654


No 28 
>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}
Probab=97.82  E-value=1.1e-05  Score=78.31  Aligned_cols=117  Identities=16%  Similarity=0.212  Sum_probs=82.0

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.+++++|+++|+++.++|+.+...+..+.+.+|+...-..++.+++...                .+..|+--.
T Consensus        88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~----------------~Kp~~~~~~  151 (218)
T d1te2a_          88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY----------------SKPHPQVYL  151 (218)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC----------------CTTSTHHHH
T ss_pred             cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----------------chhhHHHHH
Confidence            3568999999999999999999999999999999999999754434444433210                112233334


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe-C--CCCcHHHHhccCEEecc
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-G--IAGTEVAKESADVIILD  620 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam-g--~~~~~~ak~~ad~v~~~  620 (845)
                      .+++.+.-. .+.++++||+.+|+.|-+.||+.... .  ....+.....||+++.+
T Consensus       152 ~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~  207 (218)
T d1te2a_         152 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS  207 (218)
T ss_dssp             HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred             HHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence            555555544 47899999999999999999975432 2  11112233568988765


No 29 
>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}
Probab=97.81  E-value=1.2e-05  Score=78.13  Aligned_cols=124  Identities=22%  Similarity=0.281  Sum_probs=86.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.+.++.|++.|+++.++|+.....+....+++|+...-..++...+...                ....|+--.
T Consensus        95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~  158 (224)
T d2hsza1          95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY  158 (224)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred             chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc----------------ccccchhhH
Confidence            4679999999999999999999999999999999999999754333333322110                112234344


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC--CCC-cHHHHhccCEEeccCChhHHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG--IAG-TEVAKESADVIILDDNFSTIVTV  629 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg--~~~-~~~ak~~ad~v~~~~~~~~i~~~  629 (845)
                      .+.+.++-. .+.++++||+.+|+.+-+.||+ .|.+.  .+. .+.....+|+++.+  +..+.++
T Consensus       159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~i  222 (224)
T d2hsza1         159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKI  222 (224)
T ss_dssp             HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGG
T ss_pred             HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHh
Confidence            455555544 5789999999999999999997 34343  111 22345568999854  6666554


No 30 
>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}
Probab=97.73  E-value=2.3e-05  Score=78.19  Aligned_cols=97  Identities=20%  Similarity=0.171  Sum_probs=71.6

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK  565 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K  565 (845)
                      ++.|++.++++.|+++|+++.++||.+...+..+.+.+|+..-. +.++++++..                ..+..|+.-
T Consensus        99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~----------------~~KP~p~~~  162 (257)
T d1swva_          99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC  162 (257)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred             ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccc----------------ccccChHHH
Confidence            57899999999999999999999999999999999999986421 2333332211                012234444


Q ss_pred             HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127          566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG  599 (845)
Q Consensus       566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg  599 (845)
                      ..+++.+.....+.++++||+.+|+.+-+.||+-
T Consensus       163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~  196 (257)
T d1swva_         163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW  196 (257)
T ss_dssp             HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred             HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence            5566666543136799999999999999999973


No 31 
>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.57  E-value=5.6e-05  Score=72.60  Aligned_cols=118  Identities=17%  Similarity=0.145  Sum_probs=81.8

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.+++.+.++.++..| ++.++|+.+...++...+.+|+...-..++.                      +...+..|-
T Consensus        84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~----------------------~~~~~~~~p  140 (210)
T d2ah5a1          84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYG----------------------SSPEAPHKA  140 (210)
T ss_dssp             EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE----------------------ECSSCCSHH
T ss_pred             cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccccc----------------------ccccccccc
Confidence            46789999999998775 8999999999999999999998754322222                      222233344


Q ss_pred             HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe-eEEe--CCCCcHHH-HhccCEEeccCChhHHHHH
Q 003127          567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAM--GIAGTEVA-KESADVIILDDNFSTIVTV  629 (845)
Q Consensus       567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v-gIam--g~~~~~~a-k~~ad~v~~~~~~~~i~~~  629 (845)
                      ...+...+++|   +.++++||+.||+.+-+.||+ .|++  |.+..+.. ...+|+++.+  +..+.+.
T Consensus       141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~  208 (210)
T d2ah5a1         141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY  208 (210)
T ss_dssp             HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred             cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence            44444444434   678899999999999999997 3444  42333333 3458999855  6666554


No 32 
>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.53  E-value=9.7e-05  Score=74.26  Aligned_cols=131  Identities=15%  Similarity=0.242  Sum_probs=82.4

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhcCCeeEEEE-----e
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMAR-----S  560 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~-~~~~~~~~~~~~~~~~~~v~~~-----~  560 (845)
                      ++|+++++.++.|++.|+++.++||--...+.++++++|+..++..+++.. ++..   ..         +...     .
T Consensus       135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~---~~---------~~~~~~~~~i  202 (291)
T d2bdua1         135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE---NG---------VLKGFKGELI  202 (291)
T ss_dssp             CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT---TS---------BEEEECSSCC
T ss_pred             CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC---Ce---------eEeeccCCcc
Confidence            589999999999999999999999999999999999999986654333211 1100   00         0011     1


Q ss_pred             ChhcHHHHH----HHHHhhc-CCEEEEEcCCccCHHHHHhC---CeeEEeCC-CCc-HH----HHhccCEEeccCChhHH
Q 003127          561 SPMDKHTLV----KHLRTTL-GEVVAVTGDGTNDAPALHEA---DIGLAMGI-AGT-EV----AKESADVIILDDNFSTI  626 (845)
Q Consensus       561 ~p~~K~~~v----~~l~~~~-g~~v~~~GDg~ND~~ml~~A---~vgIamg~-~~~-~~----ak~~ad~v~~~~~~~~i  626 (845)
                      ....|...+    ...+... ...+.++|||.||+.|.+.+   +.+++.|- +.. +.    -+++-|+|+.+|.--.+
T Consensus       203 ~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v  282 (291)
T d2bdua1         203 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEV  282 (291)
T ss_dssp             CTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHH
T ss_pred             ccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhH
Confidence            223443333    2222221 35788889999999999743   33333331 222 21    23678999887665554


Q ss_pred             HHH
Q 003127          627 VTV  629 (845)
Q Consensus       627 ~~~  629 (845)
                      +..
T Consensus       283 ~~~  285 (291)
T d2bdua1         283 VNS  285 (291)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443


No 33 
>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}
Probab=97.41  E-value=0.00017  Score=67.61  Aligned_cols=136  Identities=17%  Similarity=0.143  Sum_probs=76.5

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLI  551 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---------------a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~  551 (845)
                      ++-|++.+++++|+++|++++++|..+...               ........|+... ...+......... ...    
T Consensus        27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~cp~~p~~~~-~~~----  100 (182)
T d2gmwa1          27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-GIYYCPHHPQGSV-EEF----  100 (182)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCBTTCSS-GGG----
T ss_pred             eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc-ceeeccccccccc-ccc----
Confidence            456899999999999999999999987321               1111222222211 0111000000000 000    


Q ss_pred             CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee--EEeC--CCCcHHHHhccCEEeccCChhHHH
Q 003127          552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAMG--IAGTEVAKESADVIILDDNFSTIV  627 (845)
Q Consensus       552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg--Iamg--~~~~~~ak~~ad~v~~~~~~~~i~  627 (845)
                      .....+....|.--..+++.+.-. .+.+.||||..+|+.+=+.||++  +.+.  ....+.....||+++.+  +..+.
T Consensus       101 ~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~  177 (182)
T d2gmwa1         101 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLP  177 (182)
T ss_dssp             BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHH
T ss_pred             cccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHH
Confidence            000001122233335555555544 36789999999999999999985  3333  12234566679999855  88888


Q ss_pred             HHHH
Q 003127          628 TVAK  631 (845)
Q Consensus       628 ~~i~  631 (845)
                      ++|+
T Consensus       178 ~~ik  181 (182)
T d2gmwa1         178 QAIK  181 (182)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            7765


No 34 
>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.38  E-value=0.00021  Score=69.60  Aligned_cols=126  Identities=16%  Similarity=0.157  Sum_probs=83.9

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.+++++|+ +|++++++|+..........+.+|+...-..++...+..                ..+.+|+-=.
T Consensus       100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~  162 (230)
T d1x42a1         100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE  162 (230)
T ss_dssp             CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred             cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc----------------ccchhhHHHH
Confidence            46789999999996 589999999999999999999999875322222221110                0011122223


Q ss_pred             HHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEe-CC-CCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIam-g~-~~~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      .+++.+.-. .+.++++||+ .+|+.+-+.||+.... .. .........+|+++.+  ++.+.++|++
T Consensus       163 ~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~  228 (230)
T d1x42a1         163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVDE  228 (230)
T ss_dssp             HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHHH
T ss_pred             HHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHHH
Confidence            344444333 3679999998 6899999999986432 11 2233455678999866  8888887753


No 35 
>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.23  E-value=0.00013  Score=69.54  Aligned_cols=118  Identities=18%  Similarity=0.182  Sum_probs=77.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.++++.|+++|+++.++|+... .+..+.+.+|+...-..++..++..                ..+..|+--.
T Consensus        82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~----------------~~Kp~~~~~~  144 (204)
T d2go7a1          82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT  144 (204)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred             cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccc----------------ccchhHHHHH
Confidence            3579999999999999999999999765 5567889999875322222221110                0112333344


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE-EeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIVTV  629 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI-amg~~~~~~ak~~ad~v~~~~~~~~i~~~  629 (845)
                      .+++.+.-. .+.+++|||+.+|+.+-+.||+.. .+. .+.    ..+|+.+.+  +..+.++
T Consensus       145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~~--~~dl~~l  200 (204)
T d2go7a1         145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQA--LADISRI  200 (204)
T ss_dssp             HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECSS--TTHHHHH
T ss_pred             HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecCC--HHHHHHH
Confidence            555555443 468999999999999999999854 344 332    235555533  5555544


No 36 
>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}
Probab=97.05  E-value=0.00035  Score=68.39  Aligned_cols=118  Identities=16%  Similarity=0.140  Sum_probs=79.7

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-cccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPMD  564 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g-~~~~~~~~~~~~~~~~~~~v~~~~~p~~  564 (845)
                      -.+.|++.+.+++|+++|+++.++|+..........+.+|+..-....... ++.                ...+..|+-
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------~~~KP~p~~  189 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK----------------IGHKVESES  189 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG----------------GCCTTCHHH
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc----------------cccCCCcHH
Confidence            356899999999999999999999999999999999989875421110000 000                001222333


Q ss_pred             HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhccCEEecc
Q 003127          565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILD  620 (845)
Q Consensus       565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~ad~v~~~  620 (845)
                      =...++.+.-. .+.++|+||..+|+.+-++||+....    |+...+.....++.++.+
T Consensus       190 ~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s  248 (253)
T d1zs9a1         190 YRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS  248 (253)
T ss_dssp             HHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred             HHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence            34455555444 47899999999999999999996654    433333445566777754


No 37 
>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}
Probab=97.03  E-value=0.00012  Score=69.95  Aligned_cols=120  Identities=13%  Similarity=0.225  Sum_probs=80.2

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.+.+++|+ +++++.++|+.....+....+.+|+...-..++.+++..                .....|+--.
T Consensus        82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~  144 (207)
T d2hdoa1          82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL  144 (207)
T ss_dssp             EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred             ccccchhhhhhhhc-ccccccccccccccccccccccccccccccccccccccc----------------cchhhhhhhc
Confidence            35689999999997 479999999999999999999999875322232222211                0111233334


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe---CCCCcHHHHhccCEEeccCChhHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIV  627 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam---g~~~~~~ak~~ad~v~~~~~~~~i~  627 (845)
                      .+++.++-. .+.+++|||+.+|+.+-+.||+....   | ..+....+.+|+++.+  +..+.
T Consensus       145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~~--l~dll  204 (207)
T d2hdoa1         145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQK--PLDIL  204 (207)
T ss_dssp             HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEESS--GGGGG
T ss_pred             ccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeCC--HHHHH
Confidence            455544433 36788999999999999999998664   3 2223334567888743  55443


No 38 
>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.02  E-value=0.00067  Score=63.49  Aligned_cols=109  Identities=15%  Similarity=0.065  Sum_probs=72.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.+++++.+++|++.|+++.++|+.+.... ...+.+|+...-..++.+++...                ....|+--.
T Consensus        79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~  141 (187)
T d2fi1a1          79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPESML  141 (187)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCHHHH
T ss_pred             cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc----------------cCCCHHHHH
Confidence            4578999999999999999999999876554 56788888753222332222110                011222223


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV  616 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~  616 (845)
                      .+.+.+.   .+.++++||+.+|+.+-+.||+-...= ++.+..++..|+
T Consensus       142 ~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~  187 (187)
T d2fi1a1         142 YLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI  187 (187)
T ss_dssp             HHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred             HHHHHcC---CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence            3333332   245889999999999999999985543 566666666553


No 39 
>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1,  Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.95  E-value=0.00085  Score=61.38  Aligned_cols=90  Identities=10%  Similarity=0.006  Sum_probs=62.4

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--h
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNI-NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M  563 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~-~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~  563 (845)
                      ++.|++.++++.|+++|+++.++|+.+. ..+....+..++......                       +.....|  +
T Consensus        46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~  102 (164)
T d1u7pa_          46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT  102 (164)
T ss_dssp             CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred             ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee-----------------------eecccCCChH
Confidence            5789999999999999999999997654 556667777776532111                       2222222  2


Q ss_pred             cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127          564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL  600 (845)
Q Consensus       564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI  600 (845)
                      .-..+.+.+.-. .+.++++||..+|+.+-++||+-.
T Consensus       103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~  138 (164)
T d1u7pa_         103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTC  138 (164)
T ss_dssp             HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEE
Confidence            223333333333 368899999999999999999844


No 40 
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.95  E-value=0.0012  Score=59.08  Aligned_cols=100  Identities=14%  Similarity=0.144  Sum_probs=62.1

Q ss_pred             cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh--cCCeeEEE----
Q 003127          485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL--IPKIQVMA----  558 (845)
Q Consensus       485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~--~~~~~v~~----  558 (845)
                      ++++.|++.+.++.|+++|++++++|||+......+.+.++...                ......  ......+.    
T Consensus        34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~----------------~~~~~~~~~~~~~~~~~~~~   97 (149)
T d1ltqa1          34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR----------------KWVEDIAGVPLVMQCQREQG   97 (149)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH----------------HHHHHTTCCCCSEEEECCTT
T ss_pred             cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh----------------hhhhhcCCCcEEEeeccccc
Confidence            57889999999999999999999999998422111111110000                000000  00011121    


Q ss_pred             --EeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127          559 --RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL  600 (845)
Q Consensus       559 --~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI  600 (845)
                        |..+.-|..+.+.+.....+.++++||...|+.|.+.+|+-.
T Consensus        98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~  141 (149)
T d1ltqa1          98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC  141 (149)
T ss_dssp             CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred             ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcE
Confidence              122356777777776653456788999999999999999864


No 41 
>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}
Probab=96.90  E-value=0.00019  Score=71.18  Aligned_cols=39  Identities=15%  Similarity=0.197  Sum_probs=30.7

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC  524 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l  524 (845)
                      ++.-+++.++|++|+++|++++++|++...+...+++++
T Consensus        17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L   55 (253)
T d1yv9a1          17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL   55 (253)
T ss_dssp             TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred             CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence            333488999999999999999999987766666665543


No 42 
>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}
Probab=96.74  E-value=0.0019  Score=63.90  Aligned_cols=46  Identities=15%  Similarity=0.158  Sum_probs=35.3

Q ss_pred             cCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccCC
Q 003127          485 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTDN  530 (845)
Q Consensus       485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~~  530 (845)
                      .+++-+++.+++++|+++|++++++|+   ++........+++|+....
T Consensus        21 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~   69 (261)
T d1vjra_          21 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD   69 (261)
T ss_dssp             TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG
T ss_pred             CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccc
Confidence            344458999999999999999999984   5566666667778876443


No 43 
>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.60  E-value=0.0039  Score=60.67  Aligned_cols=126  Identities=12%  Similarity=0.097  Sum_probs=82.1

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.|++.++++.|+ .|++++++|+.+........+.+|+...-..++.+.+..                ..+.+|+-=.
T Consensus       109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~p~~~~  171 (247)
T d2gfha1         109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK----------------EEKPAPSIFY  171 (247)
T ss_dssp             CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred             ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccc----------------cchhhhhhHH
Confidence            36799999999998 589999999999999999999999875332333222211                0011122113


Q ss_pred             HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee-EEeCC-CC--cHHHHhccCEEeccCChhHHHHHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG-LAMGI-AG--TEVAKESADVIILDDNFSTIVTVAKW  632 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vg-Iamg~-~~--~~~ak~~ad~v~~~~~~~~i~~~i~~  632 (845)
                      .+++.+.-. .+.++++||.. +|+.+-+.||+. +..-. .+  .+.....+|+++.+  +..+.++|+.
T Consensus       172 ~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~  239 (247)
T d2gfha1         172 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS  239 (247)
T ss_dssp             HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred             HHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHHH
Confidence            344444333 35788999995 899999999996 43210 11  11233457898865  7778777753


No 44 
>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}
Probab=96.44  E-value=0.00058  Score=67.36  Aligned_cols=50  Identities=12%  Similarity=0.140  Sum_probs=37.5

Q ss_pred             EeeecCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccCC
Q 003127          481 IVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTDN  530 (845)
Q Consensus       481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~~~  530 (845)
                      ++.-.+++=+++.++|+.|+++|++++++|   ++.........+++|+..+.
T Consensus        13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~   65 (250)
T d2c4na1          13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD   65 (250)
T ss_dssp             TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG
T ss_pred             eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccc
Confidence            333344445789999999999999999998   56667777767788886543


No 45 
>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}
Probab=96.41  E-value=0.0017  Score=62.06  Aligned_cols=123  Identities=9%  Similarity=0.046  Sum_probs=85.6

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      .+.+++.++++.+++.|+++.++|+-.........+..++...-..++...+...                .+.+|+-=.
T Consensus        93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~----------------~KP~p~~~~  156 (220)
T d1zrna_          93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------YKPDNRVYE  156 (220)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC----------------CTTSHHHHH
T ss_pred             cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec----------------cccHHHHHH
Confidence            3568899999999999999999999999999999999888765444443333210                112233334


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC---CCcHHHHhccCEEeccCChhHHHH
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVT  628 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~---~~~~~ak~~ad~v~~~~~~~~i~~  628 (845)
                      .+++.+.-. .+.++++||..+|+.+-+.||+-.+.-+   ...+.....+|+++.+  +..+.+
T Consensus       157 ~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~  218 (220)
T d1zrna_         157 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVE  218 (220)
T ss_dssp             HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHT
T ss_pred             HHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHh
Confidence            455555444 4689999999999999999998855321   1222344568998854  766654


No 46 
>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}
Probab=96.32  E-value=0.0019  Score=61.89  Aligned_cols=113  Identities=12%  Similarity=0.109  Sum_probs=74.1

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK  565 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K  565 (845)
                      .++-|++.+.++.|++.|+++.++|+...  +....+..|+...-..++.+++..                ..+..|+-=
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~  151 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA----------------ASKPAPDIF  151 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS----------------SCTTSTHHH
T ss_pred             ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc----------------ccccChHHH
Confidence            45678999999999999999999999865  567888889876444444433321                011122222


Q ss_pred             HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEecc
Q 003127          566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILD  620 (845)
Q Consensus       566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~  620 (845)
                      ..+.+.+.-. .+.++++||+.+|+.+-+.||+ .|.++ ++  .....++.++.+
T Consensus       152 ~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~~  203 (221)
T d1o08a_         152 IAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVPD  203 (221)
T ss_dssp             HHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEESS
T ss_pred             HHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcCC
Confidence            3344444333 3678999999999999999997 44444 32  223445665543


No 47 
>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}
Probab=96.19  E-value=0.0037  Score=59.35  Aligned_cols=135  Identities=19%  Similarity=0.180  Sum_probs=67.2

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCC--------HH-------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDN--------IN-------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI  551 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~-------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~  551 (845)
                      ++-|++.+++++|+++|++++++|..+        ..       ......++.|+...  .+...........    ...
T Consensus        48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~----~~~  121 (209)
T d2o2xa1          48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD--MVLACAYHEAGVG----PLA  121 (209)
T ss_dssp             CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECCCTTCCS----TTC
T ss_pred             EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccc--eEEEecccccccc----ccc
Confidence            467999999999999999999999532        11       12222333343211  0000000000000    000


Q ss_pred             CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEecc-CChhHHHHH
Q 003127          552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILD-DNFSTIVTV  629 (845)
Q Consensus       552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~-~~~~~i~~~  629 (845)
                      .+-..+..-+|.--.++++.+.-. .+.+.||||..+|+.+-+.||+ +|.+. .|...  ...+....+ .+...+.++
T Consensus       122 ~~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g~~~--~~~~~~~~~~~~~~e~~dl  197 (209)
T d2o2xa1         122 IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLV-DGEAA--VQPGFAIRPLRDSSELGDL  197 (209)
T ss_dssp             CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEE-TCCCE--EETTEEEEEESSHHHHHHH
T ss_pred             ccccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEe-CCCCc--ccCCccccCccchhHHHHH
Confidence            000000011222233444444433 3678999999999999999998 55554 33322  112333322 334555555


Q ss_pred             HH
Q 003127          630 AK  631 (845)
Q Consensus       630 i~  631 (845)
                      +.
T Consensus       198 l~  199 (209)
T d2o2xa1         198 LA  199 (209)
T ss_dssp             HH
T ss_pred             HH
Confidence            44


No 48 
>d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]}
Probab=96.15  E-value=0.0081  Score=52.59  Aligned_cols=107  Identities=20%  Similarity=0.322  Sum_probs=71.1

Q ss_pred             cCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceec
Q 003127          351 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP  430 (845)
Q Consensus       351 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~  430 (845)
                      +.||..+|++++|++.+..... ...+.-....||....+..++.+.   +  ..+..|++..+......    .+..  
T Consensus        29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~---g--~~v~~G~~~~~~~~~~~----~g~~--   96 (136)
T d2a29a1          29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINID---N--RMIRKGSVDAIRRHVEA----NGGH--   96 (136)
T ss_dssp             CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEET---T--EEEEEECHHHHHHHHHH----HTCC--
T ss_pred             CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEEC---C--EEEEecHHHHHHHHHHH----cCCC--
Confidence            6799999999999887543221 112233345677766665555432   2  34567998777554321    1211  


Q ss_pred             CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCC
Q 003127          431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR  489 (845)
Q Consensus       431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~  489 (845)
                      ++    ..+.+..+++..+|..++.+|                .|.+++|++++.|+++
T Consensus        97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK  135 (136)
T d2a29a1          97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK  135 (136)
T ss_dssp             CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred             Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence            12    346778899999999998888                3568999999999986


No 49 
>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}
Probab=95.86  E-value=0.0053  Score=60.22  Aligned_cols=53  Identities=21%  Similarity=0.245  Sum_probs=35.6

Q ss_pred             HHHHHHHHhhcCCEEEEEcCCcc-CHHHHHhCCe-eEEeCCCC---cHHHHhc---cCEEecc
Q 003127          566 HTLVKHLRTTLGEVVAVTGDGTN-DAPALHEADI-GLAMGIAG---TEVAKES---ADVIILD  620 (845)
Q Consensus       566 ~~~v~~l~~~~g~~v~~~GDg~N-D~~ml~~A~v-gIamg~~~---~~~ak~~---ad~v~~~  620 (845)
                      ..+++.++.. .+.++||||+.+ |+.+-++||+ +|.+. +|   .+..++.   +|+++.+
T Consensus       187 ~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~s  247 (253)
T d1wvia_         187 NKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLSS  247 (253)
T ss_dssp             HHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEESC
T ss_pred             eehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEECC
Confidence            4455555444 478999999965 9999999999 66664 32   2233333   4898854


No 50 
>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.74  E-value=0.013  Score=54.80  Aligned_cols=139  Identities=19%  Similarity=0.281  Sum_probs=91.7

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccC--------------------CHHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREK--------------------SDEE  546 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~--------------------~~~~  546 (845)
                      .+-|++.++++.+++. ...+++|---.+-++++++.+|+..+  ..-+.-+++..                    +.++
T Consensus        81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e--~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee  157 (308)
T d1y8aa1          81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE--LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE  157 (308)
T ss_dssp             CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE--EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred             eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce--eecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence            3578999999999877 67788888888889999999999521  22222222211                    1112


Q ss_pred             Hhhh----c---------CCeeEEEEeChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCe--eEEeCCCCcHHH
Q 003127          547 LSKL----I---------PKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVA  610 (845)
Q Consensus       547 ~~~~----~---------~~~~v~~~~~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~v--gIamg~~~~~~a  610 (845)
                      +.+.    +         .++...   -...|.++++......+ ...+.+||+..|++||+.|.=  |+|+.-||.+-+
T Consensus       158 l~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Ya  234 (308)
T d1y8aa1         158 LFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYA  234 (308)
T ss_dssp             HHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHH
T ss_pred             HHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccc
Confidence            2111    1         111111   12457777776655434 345788999999999997732  555556899999


Q ss_pred             HhccCEEeccCChhHHHHHHH
Q 003127          611 KESADVIILDDNFSTIVTVAK  631 (845)
Q Consensus       611 k~~ad~v~~~~~~~~i~~~i~  631 (845)
                      -..||+.+.+.+...+..++.
T Consensus       235 l~eA~VaiiS~~~~a~~~i~d  255 (308)
T d1y8aa1         235 LKHADVVIISPTAMSEAKVIE  255 (308)
T ss_dssp             HTTCSEEEECSSTHHHHHHHH
T ss_pred             ccccceEEeccchhHHHHHHH
Confidence            999999999888777666554


No 51 
>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}
Probab=95.58  E-value=0.0049  Score=57.52  Aligned_cols=88  Identities=18%  Similarity=0.283  Sum_probs=62.1

Q ss_pred             CChhHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127          488 MRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSS  561 (845)
Q Consensus       488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~  561 (845)
                      +.+++++.++.+++.|++++.+|||..    .|++++.+.+|+...+  ...+.+.+                     ..
T Consensus        87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~---------------------~~  145 (209)
T d2b82a1          87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK---------------------PG  145 (209)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC---------------------TT
T ss_pred             cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC---------------------CC
Confidence            457999999999999999999999963    4677777778986432  11111111                     12


Q ss_pred             hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEE
Q 003127          562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLA  601 (845)
Q Consensus       562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIa  601 (845)
                      ...|...++.     -+.++++||..+|..+-+.||+ +|-
T Consensus       146 K~~rr~~Ik~-----y~I~l~~GD~l~Df~aA~eagi~~iR  181 (209)
T d2b82a1         146 QNTKSQWLQD-----KNIRIFYGDSDNDITAARDVGARGIR  181 (209)
T ss_dssp             CCCSHHHHHH-----TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred             chHHHHHHHH-----cCeEEEecCCHHHHhHHHHcCCCceE
Confidence            2445555543     2588999999999999999984 443


No 52 
>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.19  E-value=0.0068  Score=57.68  Aligned_cols=105  Identities=12%  Similarity=0.150  Sum_probs=67.3

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP  562 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p  562 (845)
                      ++.+++.+.+++|+++|+++.++|+..    ...........|+...-..++.+++..                .....|
T Consensus        97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~----------------~~KP~p  160 (222)
T d1cr6a1          97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG----------------MIKPEP  160 (222)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS----------------CCTTCH
T ss_pred             CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhcc----------------CCCCCh
Confidence            367999999999999999999999643    334444455566543222232222111                011234


Q ss_pred             hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHH
Q 003127          563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEV  609 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~  609 (845)
                      +--...++.++-. .+.++|+||..+|+.+-+.||+ +|-+. ++.+.
T Consensus       161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~  206 (222)
T d1cr6a1         161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA  206 (222)
T ss_dssp             HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred             HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence            4445566666555 5778999999999999999997 44444 44443


No 53 
>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}
Probab=94.91  E-value=0.0043  Score=56.20  Aligned_cols=100  Identities=16%  Similarity=0.116  Sum_probs=54.3

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCC--------HHHH-------HHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDN--------INTA-------KAIARECGILTDNGIAIEGPEFREKSDEELSKLI  551 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta-------~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~  551 (845)
                      ++-|++.+++++|+++|++++++|..+        ....       .......|+... ...++...-...         
T Consensus        30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~i~~~~~~~~~~---------   99 (161)
T d2fpwa1          30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD-EVLICPHLPADE---------   99 (161)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE-EEEEECCCGGGC---------
T ss_pred             eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc-eeeecccccccc---------
Confidence            467899999999999999999999753        1111       222233333210 000100000000         


Q ss_pred             CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127          552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL  600 (845)
Q Consensus       552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI  600 (845)
                         .-+....|.-=.++++.+.-. .+.+.||||...|+.|-+.||+--
T Consensus       100 ---~~~~KP~p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~  144 (161)
T d2fpwa1         100 ---CDCRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGING  144 (161)
T ss_dssp             ---CSSSTTSSGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred             ---ccccccccHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeE
Confidence               000011222223444444433 367899999999999999999864


No 54 
>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}
Probab=94.24  E-value=0.052  Score=51.97  Aligned_cols=95  Identities=12%  Similarity=0.094  Sum_probs=67.5

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH  566 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~  566 (845)
                      ++.+++.+++++|+  |+++.++|..+...+....+..|+...-..++.+++...                .+..|+-=.
T Consensus        93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~----------------~KP~p~~f~  154 (245)
T d1qq5a_          93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV----------------FKPHPDSYA  154 (245)
T ss_dssp             CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTSHHHHH
T ss_pred             ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccc----------------cCccHHHHH
Confidence            45688899999885  789999999999999999999998765444444433211                112233224


Q ss_pred             HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127          567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL  600 (845)
Q Consensus       567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI  600 (845)
                      .+++.+.-+ .+.+++|||+.+|+.+=+.||+.-
T Consensus       155 ~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~t  187 (245)
T d1qq5a_         155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSV  187 (245)
T ss_dssp             HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEE
T ss_pred             HHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeE
Confidence            455555444 467999999999999999999753


No 55 
>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=94.08  E-value=0.024  Score=53.71  Aligned_cols=123  Identities=10%  Similarity=0.115  Sum_probs=75.8

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK  565 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~-~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K  565 (845)
                      .+.+++.+.+++++   .+..++|+.....+....+.+|+...... +..+++...              -.++..|+.=
T Consensus        85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------~~~KP~~~~~  147 (222)
T d2fdra1          85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA--------------DRVKPKPDIF  147 (222)
T ss_dssp             CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT--------------TCCTTSSHHH
T ss_pred             chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccccc--------------cccccCHHHH
Confidence            46778888887775   45679999999999999999999753211 111111000              0001122222


Q ss_pred             HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCc-------HH-HHhccCEEeccCChhHHHHHH
Q 003127          566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-------EV-AKESADVIILDDNFSTIVTVA  630 (845)
Q Consensus       566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~-------~~-ak~~ad~v~~~~~~~~i~~~i  630 (845)
                      ....+.+.-. .+.+++|||+.+|+.+-+.||+- |.+. ++.       +. ....||+++.+  +..+..+|
T Consensus       148 ~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll  217 (222)
T d2fdra1         148 LHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI  217 (222)
T ss_dssp             HHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred             HHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence            3444444433 46899999999999999999974 3333 222       11 23349999966  66666655


No 56 
>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.65  E-value=0.031  Score=52.59  Aligned_cols=100  Identities=13%  Similarity=0.187  Sum_probs=59.4

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH----HHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP  562 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~----~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p  562 (845)
                      ++.+++.+.+++|+++|++++++|........    ......++...-..++.+++..                ....+|
T Consensus        99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~----------------~~KP~~  162 (225)
T d1zd3a1          99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG----------------MVKPEP  162 (225)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT----------------CCTTCH
T ss_pred             CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc----------------cchhHH
Confidence            36789999999999999999999976433222    2222233322111222111100                001122


Q ss_pred             hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC
Q 003127          563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG  603 (845)
Q Consensus       563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg  603 (845)
                      +-=..+++.+... .+.+++|||...|+.+-++||+ +|.+.
T Consensus       163 ~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~  203 (225)
T d1zd3a1         163 QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQ  203 (225)
T ss_dssp             HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred             HHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence            2224444444433 3678899999999999999999 55453


No 57 
>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}
Probab=89.43  E-value=0.011  Score=54.49  Aligned_cols=93  Identities=13%  Similarity=0.135  Sum_probs=57.2

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----e
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S  560 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l-gi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~  560 (845)
                      ++.+++.+.++.+++.|+++.++|+.+...+....... |+.                     ..+..  +++.     .
T Consensus        84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~---------------------~~fd~--v~~s~~~~~~  140 (197)
T d2b0ca1          84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR---------------------DAADH--IYLSQDLGMR  140 (197)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH---------------------HHCSE--EEEHHHHTCC
T ss_pred             ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch---------------------hhccc--eeeccccccc
Confidence            46789999999999999999999987654332222211 111                     11111  2211     1


Q ss_pred             Ch--hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC
Q 003127          561 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG  603 (845)
Q Consensus       561 ~p--~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg  603 (845)
                      .|  +-=..+++.+.-. .+.++++||+.+|+.+-+.||+ +|.+.
T Consensus       141 Kp~~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~  185 (197)
T d2b0ca1         141 KPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVK  185 (197)
T ss_dssp             TTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred             ccchHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence            12  2223333443333 3679999999999999999997 55554


No 58 
>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=79.89  E-value=1.1  Score=37.39  Aligned_cols=34  Identities=6%  Similarity=-0.048  Sum_probs=29.0

Q ss_pred             CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q 003127          486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKA  519 (845)
Q Consensus       486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~  519 (845)
                      +++-+++.+.+++|++.|+++++.|+|....-..
T Consensus        20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~   53 (122)
T d2obba1          20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDE   53 (122)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHH
Confidence            3577899999999999999999999998755433


No 59 
>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}
Probab=64.33  E-value=3.6  Score=34.06  Aligned_cols=27  Identities=22%  Similarity=0.213  Sum_probs=25.5

Q ss_pred             CCChhHHHHHHHHHHcCCEEEEEcCCC
Q 003127          487 PMRPGVKESVAICRSAGITVRMVTGDN  513 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~  513 (845)
                      .+.+++.+.++.|++.|+++++.|+|.
T Consensus        24 ~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_          24 LPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            578999999999999999999999996


No 60 
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=62.11  E-value=1.7  Score=30.66  Aligned_cols=38  Identities=13%  Similarity=0.151  Sum_probs=28.3

Q ss_pred             HhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeee
Q 003127           58 LDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVP   98 (845)
Q Consensus        58 l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iP   98 (845)
                      .++......+.|  ||+...-+..++.+||.|.+. |+.+|
T Consensus        19 a~~lI~~g~V~V--ng~~v~~~~~~v~~~d~I~~~-g~~l~   56 (58)
T d1vioa2          19 ATKAIRQSAVKI--NGEIVKSGSVQISQEDEIYFE-DELLT   56 (58)
T ss_dssp             HHHHHHTTCEEE--TTEECCCTTCEECTTSCEEET-TEECC
T ss_pred             HHHHHHcCeEEE--CCEEeCCCCCCCCCCCEEEEC-CEEcc
Confidence            334444455554  999998899999999999995 77765


No 61 
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=49.93  E-value=3.8  Score=32.75  Aligned_cols=32  Identities=22%  Similarity=0.143  Sum_probs=24.6

Q ss_pred             hcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCe
Q 003127           62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ   96 (845)
Q Consensus        62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~   96 (845)
                      .....++|  ||+..+ ++.++++||+|.+..|..
T Consensus        27 i~~G~V~v--Ng~~vK-ps~~vk~GDvI~i~~~~~   58 (104)
T d1dm9a_          27 IEGGKVHY--NGQRSK-PSKIVELNATLTLRQGND   58 (104)
T ss_dssp             HHTTCEEE--TTEECC-TTCBCCTTCEEEEEETTE
T ss_pred             HHcCCeee--CCeecc-ccccCCCCCEEEEEeCCe
Confidence            33444544  998765 899999999999998864


No 62 
>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=45.39  E-value=4  Score=35.82  Aligned_cols=35  Identities=26%  Similarity=0.364  Sum_probs=22.2

Q ss_pred             CChhH-HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH
Q 003127          488 MRPGV-KESVAICRSAGITVRMVTGDNINTAKAIARE  523 (845)
Q Consensus       488 l~~~~-~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~  523 (845)
                      ..|+- ...++.|++.|.. +..+||....+.++.+.
T Consensus        97 ~~p~~K~~lv~~l~~~g~~-Va~vGDG~nD~~AL~~A  132 (168)
T d1wpga2          97 VEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPALKKA  132 (168)
T ss_dssp             CCHHHHHHHHHHHHHTTCC-EEEEECSGGGHHHHHHS
T ss_pred             cchhHHHHHHHHHHhcccc-eeEEecCCCCHHHHHhC
Confidence            34443 5667778888854 56668887766655543


No 63 
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=44.68  E-value=6.5  Score=33.92  Aligned_cols=27  Identities=22%  Similarity=0.409  Sum_probs=23.7

Q ss_pred             EEECCeEEEEecCCcCCCcEEEEcCCC
Q 003127           69 VARNGFRRKISIYDLLPGDIVHLCMGD   95 (845)
Q Consensus        69 V~r~g~~~~i~~~~l~~GDii~l~~G~   95 (845)
                      +.-||+...||+-.+.|||+|.+++..
T Consensus        78 i~vNgk~v~iPSy~vk~GDvIsvkeks  104 (159)
T d1c06a_          78 ILVDGSRVNIPSYRVKPGQTIAVREKS  104 (159)
T ss_dssp             EEETTEECCCSSCCCCSSCEEEECGGG
T ss_pred             eEccceEEEecceeecCCcEEeecccc
Confidence            445999999999999999999998653


No 64 
>d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=43.88  E-value=20  Score=28.56  Aligned_cols=85  Identities=20%  Similarity=0.264  Sum_probs=51.4

Q ss_pred             cCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEE--EEeCcHHHHHHhchhccccCCce
Q 003127          351 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV--HCKGASEIILAACDKFLNSNGEV  428 (845)
Q Consensus       351 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~--~~kGa~~~il~~~~~~~~~~~~~  428 (845)
                      +.||..+|+++++++.+......         ..|..          .++.++..  +.-|+++.+-+.        +..
T Consensus        26 S~HPlA~AIv~~a~~~~~~~~~~---------~~~~~----------~~G~Gi~g~~v~vG~~~~~~~~--------~~~   78 (113)
T d2b8ea2          26 SEHPIAEAIVKKALEHGIELGEP---------EKVEV----------IAGEGVVADGILVGNKRLMEDF--------GVA   78 (113)
T ss_dssp             CCSHHHHHHHHHHHTTTCCCCCC---------SCEEE----------ETTTEEEETTEEEECHHHHHHT--------TCC
T ss_pred             CCCchHHHHHHHHHHhcCCCCcc---------cccee----------eccceEEeEEEEECcHHHHHhc--------CCC
Confidence            78999999999998876543211         11111          11222211  233777665432        111


Q ss_pred             ecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeee
Q 003127          429 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI  484 (845)
Q Consensus       429 ~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~  484 (845)
                        ++    +.+.+..+++..+|..++.++.                |..++|++++
T Consensus        79 --~~----~~~~~~~~~~~~~G~T~v~va~----------------d~~~~G~ial  112 (113)
T d2b8ea2          79 --VS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAV  112 (113)
T ss_dssp             --CC----HHHHHHHHHHHTTTCEEEEEEE----------------TTEEEEEEEE
T ss_pred             --CC----HHHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEE
Confidence              22    3466788899999998888773                5578888875


No 65 
>d2z1ca1 b.40.14.1 (A:2-72) Hydrogenase expression/formation protein HypC {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=35.06  E-value=28  Score=25.15  Aligned_cols=33  Identities=27%  Similarity=0.350  Sum_probs=26.4

Q ss_pred             CCeeEEEECCeEEEEec---CCcCCCcEEEEcCCCe
Q 003127           64 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGDQ   96 (845)
Q Consensus        64 ~~~~~V~r~g~~~~i~~---~~l~~GDii~l~~G~~   96 (845)
                      ...+.|-.+|..++++.   .|++|||-|++..|-.
T Consensus        13 ~~~A~vd~~G~~r~v~l~lv~e~~vGDyVLVh~G~A   48 (71)
T d2z1ca1          13 GPVAVVDFGGVKREVRLDLMPDTKPGDWVIVHTGFA   48 (71)
T ss_dssp             TTEEEEEETTEEEEEECTTSTTCCTTCEEEEETTEE
T ss_pred             CCEEEEEcCCeEEEEEEEeeCCCCCCCEEEEeechh
Confidence            34677888898888774   5789999999999944


No 66 
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]}
Probab=34.12  E-value=7.3  Score=35.07  Aligned_cols=33  Identities=24%  Similarity=0.326  Sum_probs=26.9

Q ss_pred             hhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCC
Q 003127           61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD   95 (845)
Q Consensus        61 ~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~   95 (845)
                      ..+...+.|  ||+...||+-.+.|||+|.+++..
T Consensus       115 ~v~Hghi~V--Ngk~VnIPSy~vk~GDvIsvkeks  147 (204)
T d2gy9d1         115 LVSHKAIMV--NGRVVNIASYQVSPNDVVSIREKA  147 (204)
T ss_dssp             HHHTTCEEE--SSSBCCCTTCBCCTTCBEEECTTG
T ss_pred             HHHhcceec--CCEEEEeccEeecCCCEEEeccch
Confidence            344444444  999999999999999999999765


No 67 
>d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=33.41  E-value=36  Score=25.98  Aligned_cols=48  Identities=15%  Similarity=0.123  Sum_probs=40.0

Q ss_pred             EeeecCCCChhHHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCCcc
Q 003127          481 IVGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGILT  528 (845)
Q Consensus       481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~-~TGd~~~ta~~ia~~lgi~~  528 (845)
                      ++.+.+.-.+.+.+..+.|+++|+++-+ .++++...-...|...|+..
T Consensus         8 i~~~g~~~~~~~~~l~~~Lr~~gi~v~~d~~~~~l~kq~~~A~~~~~~~   56 (97)
T d1wu7a1           8 ICRVGKINSSIMNEYSRKLRERGMNVTVEIMERGLSAQLKYASAIGADF   56 (97)
T ss_dssp             EEEESSCCHHHHHHHHHHHHTTTCEEEECCSCCCHHHHHHHHHHTTCSE
T ss_pred             EEEeCHHHHHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhcCCCe
Confidence            3445677788999999999999999988 47778888999999999853


No 68 
>d1dgsa2 b.40.4.6 (A:315-400) NAD+-dependent DNA ligase {Thermus filiformis [TaxId: 276]}
Probab=31.11  E-value=8.6  Score=29.25  Aligned_cols=27  Identities=26%  Similarity=0.289  Sum_probs=20.4

Q ss_pred             EecCCcCCCcEEEEc-CCCeeeccEEEE
Q 003127           78 ISIYDLLPGDIVHLC-MGDQVPADGLFV  104 (845)
Q Consensus        78 i~~~~l~~GDii~l~-~G~~iPaD~~ll  104 (845)
                      +.-.+|.+||.|.+. .||+||-=..++
T Consensus        48 i~~~~i~~Gd~V~i~raGdVIP~I~~vi   75 (86)
T d1dgsa2          48 IEELDIRIGDWVLVHKAGGVIPEVLRVL   75 (86)
T ss_dssp             HHHTTCBSSCEEEEEEETTTEEEEEEEC
T ss_pred             HhhcCCCcCceEEEEECCCCccceeEee
Confidence            344689999999887 799999644443


No 69 
>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.95  E-value=10  Score=33.96  Aligned_cols=35  Identities=11%  Similarity=0.160  Sum_probs=26.4

Q ss_pred             HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127          566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA  601 (845)
Q Consensus       566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa  601 (845)
                      ..+++.+.-. .+.+++|||..+|+.+-++||+--+
T Consensus       166 ~~~~~~lg~~-p~e~l~VgD~~~Dv~~A~~aG~~ti  200 (225)
T d2g80a1         166 ANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATG  200 (225)
T ss_dssp             HHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred             HHHHHhcccC-chhceeecCCHHHHHHHHHcCCEEE
Confidence            3445555444 4789999999999999999998433


No 70 
>d2uubd1 d.66.1.2 (D:2-209) Ribosomal protein S4 {Thermus thermophilus [TaxId: 274]}
Probab=29.94  E-value=14  Score=33.23  Aligned_cols=26  Identities=27%  Similarity=0.492  Sum_probs=23.4

Q ss_pred             EEECCeEEEEecCCcCCCcEEEEcCC
Q 003127           69 VARNGFRRKISIYDLLPGDIVHLCMG   94 (845)
Q Consensus        69 V~r~g~~~~i~~~~l~~GDii~l~~G   94 (845)
                      |.-||+...||+-.+.|||+|.+++.
T Consensus       125 i~vNg~~v~ips~~~~~gd~I~vrek  150 (208)
T d2uubd1         125 ITVNGRRVDLPSYRVRPGDEIAVAEK  150 (208)
T ss_dssp             EEETTEECCCTTCBCCTTCEEEECGG
T ss_pred             eecCCeEEEeccEEecCCceeehhhc
Confidence            44599999999999999999999875


No 71 
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=28.06  E-value=55  Score=26.05  Aligned_cols=35  Identities=20%  Similarity=0.108  Sum_probs=25.4

Q ss_pred             eeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEee
Q 003127           66 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSG  106 (845)
Q Consensus        66 ~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~  106 (845)
                      -++++.+.+..++.      .+.+.+..|+.+|||.+++..
T Consensus        86 GV~i~~~~~v~~~~------~~~v~l~dg~~i~~D~vi~a~  120 (121)
T d1d7ya2          86 GVDLRFERSVTGSV------DGVVLLDDGTRIAADMVVVGI  120 (121)
T ss_dssp             TCEEEESCCEEEEE------TTEEEETTSCEEECSEEEECS
T ss_pred             CcEEEeCCEEEEEe------CCEEEECCCCEEECCEEEEee
Confidence            45666666655543      346889999999999999763


No 72 
>d3d3ra1 b.40.14.1 (A:1-76) Hydrogenase expression/formation protein HypC {Shewanella oneidensis [TaxId: 70863]}
Probab=27.01  E-value=37  Score=24.90  Aligned_cols=33  Identities=33%  Similarity=0.386  Sum_probs=25.5

Q ss_pred             CeeEEEECCeEEEEec----CCcCCCcEEEEcCCCee
Q 003127           65 ITVQVARNGFRRKISI----YDLLPGDIVHLCMGDQV   97 (845)
Q Consensus        65 ~~~~V~r~g~~~~i~~----~~l~~GDii~l~~G~~i   97 (845)
                      ..++|-.+|..++++.    +++.|||-|++..|-.+
T Consensus        17 ~~a~vd~~G~~r~v~l~lv~e~v~vGDyVLVH~G~Ai   53 (76)
T d3d3ra1          17 QSVTVDTLGVRRDVSSHLMTEPLAIGDYVLIHIGFVM   53 (76)
T ss_dssp             TEEEEEETTEEEEEECTTBSSCCCTTCEEEEEEEEEE
T ss_pred             cEEEEECCCeEEEEEEEeccCCCCCCCEEEEecchhh
Confidence            4577888898888863    34889999999988443


No 73 
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=26.41  E-value=1.7e+02  Score=24.26  Aligned_cols=116  Identities=16%  Similarity=0.166  Sum_probs=68.3

Q ss_pred             hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC--h---hc
Q 003127          490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS--P---MD  564 (845)
Q Consensus       490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~--p---~~  564 (845)
                      +-.....+.|.+.|++-+.+++|+.+.+..+++++|....             .-+++.+.+.+..+...++  |   ..
T Consensus        34 ~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~-------------~~~~~~~~l~~~Divi~atss~~~ii~  100 (159)
T d1gpja2          34 EMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV-------------RFDELVDHLARSDVVVSATAAPHPVIH  100 (159)
T ss_dssp             HHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC-------------CGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred             HHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccc-------------cchhHHHHhccCCEEEEecCCCCcccc
Confidence            3346778889999999999999999999999999986421             1123333333333333333  3   34


Q ss_pred             HHHHHHHHHhhc-CC-EEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHH
Q 003127          565 KHTLVKHLRTTL-GE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV  636 (845)
Q Consensus       565 K~~~v~~l~~~~-g~-~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~  636 (845)
                      |..+-+.++.+. ++ .+.+              |+|+  --+-.+.+.+..++.+.+  .+.+....++.+..
T Consensus       101 ~~~i~~~~~~r~~~~~~~ii--------------Dlav--Pr~vd~~v~~~~~v~l~~--ld~l~~~~~~n~~~  156 (159)
T d1gpja2         101 VDDVREALRKRDRRSPILII--------------DIAN--PRDVEEGVENIEDVEVRT--IDDLRVIARENLER  156 (159)
T ss_dssp             HHHHHHHHHHCSSCCCEEEE--------------ECCS--SCSBCTTGGGSTTEEEEE--HHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHhcccCCCeEEE--------------eecC--CCCcChhhhccCCeEEEe--HHHHHHHHHHHHHH
Confidence            555555555431 22 2333              3433  323334456666777765  77777776655543


No 74 
>d1kska3 d.66.1.5 (A:1-59) Pseudouridine synthase RsuA N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.93  E-value=13  Score=25.89  Aligned_cols=35  Identities=23%  Similarity=0.173  Sum_probs=24.3

Q ss_pred             HHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEc
Q 003127           56 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC   92 (845)
Q Consensus        56 ~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~   92 (845)
                      .+.++......++  -||+...-+..++.+||.|.+.
T Consensus        16 ~~a~~lI~~g~V~--Vng~~v~~~~~~V~~~d~I~~d   50 (59)
T d1kska3          16 AIAGREIRGNRVT--VDGEIVRNAAFKLLPEHDVAYD   50 (59)
T ss_dssp             HHHHHHHHTTCEE--ETTEECCCTTCEECTTCCEEET
T ss_pred             HHHHHHHHcCcEE--ECCEEeecCCcCcCCCCEEEEC
Confidence            3344444444454  4999998889999999988773


No 75 
>d1dq3a1 b.86.1.2 (A:1-128,A:415-454) PI-Pfui intein {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=25.49  E-value=28  Score=29.93  Aligned_cols=34  Identities=24%  Similarity=0.065  Sum_probs=25.1

Q ss_pred             eeEEEE-CCeEEEEecCCcCCCcEEEEcCCCeeec
Q 003127           66 TVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPA   99 (845)
Q Consensus        66 ~~~V~r-~g~~~~i~~~~l~~GDii~l~~G~~iPa   99 (845)
                      ...|.+ +|+.+.+++++|.+||.+.-..|...+.
T Consensus       100 p~~v~~~~~~~~~~~a~~L~~GD~l~~~~~~~~v~  134 (168)
T d1dq3a1         100 PFFVLTPDFKIVEKRADELKEGDILIGGMGLEVVR  134 (168)
T ss_dssp             EEEEECTTSCEEEEETTTCCTTCEECBCCHCEEEE
T ss_pred             eEEEecCCCeEEEEEcccCCCCCEEEecCcceeEE
Confidence            344555 4678889999999999998666665543


No 76 
>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.76  E-value=30  Score=27.64  Aligned_cols=41  Identities=10%  Similarity=0.074  Sum_probs=34.6

Q ss_pred             CCChhHHHHHHHHHHcCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 003127          487 PMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL  527 (845)
Q Consensus       487 ~l~~~~~~~I~~l~~~Gi~-v~~~TGd~~~ta~~ia~~lgi~  527 (845)
                      -..+.+.++++++.+.|++ +|+-+|-..+.+...+++.|+.
T Consensus        64 vp~~~~~~~l~~~~~~g~k~v~~~~g~~~~~~~~~a~~~gi~  105 (116)
T d1y81a1          64 VPPKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE  105 (116)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE
T ss_pred             eCHHHHHHHHHHHHhcCCceEEeccchhhHHHHHHHHHcCCE
Confidence            4567779999999999999 6666888888999999999974


No 77 
>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.23  E-value=21  Score=31.79  Aligned_cols=26  Identities=12%  Similarity=0.252  Sum_probs=23.5

Q ss_pred             CChhHHHHHHHHHHcCCEEEEEcCCC
Q 003127          488 MRPGVKESVAICRSAGITVRMVTGDN  513 (845)
Q Consensus       488 l~~~~~~~I~~l~~~Gi~v~~~TGd~  513 (845)
                      +.|++.++|++|+++|+.++++|.-+
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~   76 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQM   76 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECH
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcc
Confidence            47999999999999999999999753


No 78 
>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}
Probab=22.27  E-value=18  Score=29.96  Aligned_cols=40  Identities=13%  Similarity=0.077  Sum_probs=35.1

Q ss_pred             CChhHHHHHHHHHHcCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 003127          488 MRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL  527 (845)
Q Consensus       488 l~~~~~~~I~~l~~~Gi~-v~~~TGd~~~ta~~ia~~lgi~  527 (845)
                      ..+.+.++++++.+.|++ +|+-+|-..+.+...|++.|+.
T Consensus        79 p~~~v~~~v~~~~~~g~k~i~~q~G~~~~e~~~~a~~~Gi~  119 (136)
T d1iuka_          79 PPSALMDHLPEVLALRPGLVWLQSGIRHPEFEKALKEAGIP  119 (136)
T ss_dssp             CHHHHTTTHHHHHHHCCSCEEECTTCCCHHHHHHHHHTTCC
T ss_pred             cHHHHHHHHHHHHhhCCCeEEEecCccCHHHHHHHHHcCCE
Confidence            467788999999999997 7788898889999999999985


No 79 
>d2ftsa2 b.103.1.1 (A:318-498) Gephyrin, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.94  E-value=40  Score=29.30  Aligned_cols=62  Identities=18%  Similarity=0.293  Sum_probs=41.2

Q ss_pred             cCCcCCCcEEEEcCCCeee--ccEEEEeeCceeEecccCCCCCCcc-----cccCCCCeEEeccEEEece
Q 003127           80 IYDLLPGDIVHLCMGDQVP--ADGLFVSGFSVLINESSLTGESEPV-----NVNALNPFLLSGTKVQNGS  142 (845)
Q Consensus        80 ~~~l~~GDii~l~~G~~iP--aD~~ll~~~~~~Vdes~LtGEs~p~-----~k~~~~~~v~~Gt~v~~g~  142 (845)
                      ...+.+|+-+.+..|..+|  ||+++..-+ +.+.....+|.....     ...+++++-..|+-+..|+
T Consensus        83 ~~~l~~g~av~I~TGa~lP~gaDaVV~~E~-~~~~~~~~~~~~~~~i~i~~~~~~g~~Ir~~GeD~~~G~  151 (181)
T d2ftsa2          83 TQTVMPGQVMRVTTGAPIPCGADAVVQVED-TELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGE  151 (181)
T ss_dssp             CCCCCTTEEEEECTTCBCCTTCCEEEEGGG-EEEEEESTTSSCEEEEEECSCCCTTTTEECTTSSBCTTC
T ss_pred             cccccCceEEEcccCcccccccceEEEeee-eEEeccccccccccceEEeccccCCCccccchhccCCCC
Confidence            4679999999999999998  788887764 565444444332211     1123566667777777666


No 80 
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=21.40  E-value=12  Score=27.86  Aligned_cols=28  Identities=21%  Similarity=0.351  Sum_probs=23.3

Q ss_pred             EEECCeEEEEecCCcCCCcEEEEcCCCee
Q 003127           69 VARNGFRRKISIYDLLPGDIVHLCMGDQV   97 (845)
Q Consensus        69 V~r~g~~~~i~~~~l~~GDii~l~~G~~i   97 (845)
                      |.-||+...-+...+.+||+|.+. |+.+
T Consensus        48 V~VNG~~~~~p~~~V~~~d~I~vd-G~~i   75 (79)
T d1p9ka_          48 VKVDGAVETRKRCKIVAGQTVSFA-GHSV   75 (79)
T ss_dssp             HEETTBCCCCSSCCCCSSEEEEET-TEEE
T ss_pred             cccCCEEeccccccCCCCCEEEEC-CEEE
Confidence            445999999999999999999986 6654


No 81 
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.31  E-value=12  Score=31.09  Aligned_cols=16  Identities=50%  Similarity=0.615  Sum_probs=13.8

Q ss_pred             CcEEEEeccCCccCCC
Q 003127          276 SATSICSDKTGTLTTN  291 (845)
Q Consensus       276 ~v~~i~~DKTGTLT~~  291 (845)
                      +++++++||||++|.+
T Consensus         2 ~~~~~~~d~~~~~~~g   17 (135)
T d2b8ea1           2 KVTAVIFDKTGTLTKG   17 (135)
T ss_dssp             HCCEEEEECCCCCBCS
T ss_pred             eEEEEEECCceEEEEe
Confidence            3678999999999965


No 82 
>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}
Probab=20.52  E-value=17  Score=32.58  Aligned_cols=16  Identities=31%  Similarity=0.356  Sum_probs=13.7

Q ss_pred             CcEEEEeccCCccCCC
Q 003127          276 SATSICSDKTGTLTTN  291 (845)
Q Consensus       276 ~v~~i~~DKTGTLT~~  291 (845)
                      +++.||||..|||+.+
T Consensus         1 kiK~i~~D~DGTL~~~   16 (230)
T d1wr8a_           1 KIKAISIDIDGTITYP   16 (230)
T ss_dssp             CCCEEEEESTTTTBCT
T ss_pred             CceEEEEecCCCCcCC
Confidence            4678999999999964


No 83 
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=20.19  E-value=1e+02  Score=24.22  Aligned_cols=39  Identities=10%  Similarity=-0.032  Sum_probs=26.5

Q ss_pred             CCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEe
Q 003127           64 KITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS  105 (845)
Q Consensus        64 ~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~  105 (845)
                      ...+.++.+-+.+++..+.  ... ..+..|+.+|||.+++.
T Consensus        84 ~~gv~~~~~~~v~~i~~~~--~~~-~v~~dg~~i~~D~vi~a  122 (123)
T d1nhpa2          84 ANNITIATGETVERYEGDG--RVQ-KVVTDKNAYDADLVVVA  122 (123)
T ss_dssp             TTTEEEEESCCEEEEECSS--BCC-EEEESSCEEECSEEEEC
T ss_pred             cCCeEEEeCceEEEEEcCC--CEE-EEEeCCCEEECCEEEEE
Confidence            3457777777777776432  122 34788999999999874


No 84 
>d2dsma1 d.372.1.1 (A:1-64) Hypothetical protein YqaI {Bacillus subtilis [TaxId: 1423]}
Probab=20.14  E-value=20  Score=24.63  Aligned_cols=20  Identities=15%  Similarity=0.064  Sum_probs=16.0

Q ss_pred             EecCCcCCCcEEEEcCCCee
Q 003127           78 ISIYDLLPGDIVHLCMGDQV   97 (845)
Q Consensus        78 i~~~~l~~GDii~l~~G~~i   97 (845)
                      +.-+++-|||-+++.+|+++
T Consensus        24 ~~Gsev~p~Dd~li~pGEv~   43 (64)
T d2dsma1          24 FYGDEVTPVDDYVIDGGEII   43 (64)
T ss_dssp             TTSSCBCTTSCEEEETTEEE
T ss_pred             hhccccccCCceEEcCCeee
Confidence            44678899999999988865


Done!