Query 003131
Match_columns 845
No_of_seqs 485 out of 3736
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 14:23:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j09_A COPA, copper-exporting 100.0 1.5E-93 5.1E-98 846.2 32.8 573 203-844 3-575 (723)
2 3rfu_A Copper efflux ATPase; a 100.0 9.5E-90 3.2E-94 806.6 53.0 516 282-845 73-595 (736)
3 3j08_A COPA, copper-exporting 100.0 1.1E-84 3.7E-89 759.9 22.1 491 291-844 7-497 (645)
4 1mhs_A Proton pump, plasma mem 100.0 4.2E-67 1.4E-71 625.3 26.0 414 396-844 140-575 (920)
5 2zxe_A Na, K-ATPase alpha subu 100.0 1.6E-61 5.6E-66 593.0 42.4 416 397-844 134-639 (1028)
6 3b8c_A ATPase 2, plasma membra 100.0 8.6E-66 2.9E-70 615.0 2.1 411 396-844 92-528 (885)
7 3ixz_A Potassium-transporting 100.0 9.7E-60 3.3E-64 578.5 44.2 416 397-844 139-644 (1034)
8 3ar4_A Sarcoplasmic/endoplasmi 100.0 1.3E-59 4.5E-64 576.8 40.2 438 396-844 88-643 (995)
9 2hc8_A PACS, cation-transporti 100.0 2.7E-28 9.1E-33 215.8 11.7 111 425-541 2-112 (113)
10 2kij_A Copper-transporting ATP 99.9 3.2E-28 1.1E-32 219.5 9.3 123 419-541 2-124 (124)
11 2yj3_A Copper-transporting ATP 99.8 6.1E-25 2.1E-29 229.4 0.0 173 623-844 4-176 (263)
12 3a1c_A Probable copper-exporti 99.9 3.9E-21 1.3E-25 203.6 22.7 196 623-844 8-203 (287)
13 2ew9_A Copper-transporting ATP 99.8 9.3E-20 3.2E-24 172.8 15.1 145 45-195 3-147 (149)
14 1p6t_A Potential copper-transp 99.8 1.3E-18 4.5E-23 165.3 18.0 139 45-197 5-143 (151)
15 2ew9_A Copper-transporting ATP 99.8 1.5E-18 5.1E-23 164.5 16.6 141 128-271 4-146 (149)
16 2rop_A Copper-transporting ATP 99.8 9.6E-18 3.3E-22 167.6 16.4 154 44-197 18-191 (202)
17 1p6t_A Potential copper-transp 99.8 1.1E-17 3.9E-22 158.8 15.8 138 128-274 6-143 (151)
18 3skx_A Copper-exporting P-type 99.8 3.6E-17 1.2E-21 172.4 21.0 184 635-844 1-184 (280)
19 1svj_A Potassium-transporting 99.7 1.1E-16 3.7E-21 149.8 15.2 136 654-807 13-156 (156)
20 2rop_A Copper-transporting ATP 99.7 1.4E-16 4.8E-21 159.1 15.7 144 127-273 19-190 (202)
21 2kmv_A Copper-transporting ATP 99.7 3.7E-16 1.3E-20 151.2 17.7 129 656-804 1-185 (185)
22 2arf_A Wilson disease ATPase; 99.6 1.5E-14 5.1E-19 138.0 14.7 126 658-803 1-165 (165)
23 3dxs_X Copper-transporting ATP 99.2 4.7E-11 1.6E-15 97.5 8.5 68 129-196 3-70 (74)
24 3dxs_X Copper-transporting ATP 99.1 1.1E-10 3.8E-15 95.3 8.9 70 45-114 1-70 (74)
25 4a4j_A Pacszia, cation-transpo 99.1 1.5E-10 5.1E-15 93.0 8.5 66 129-195 3-68 (69)
26 2ofg_X Zinc-transporting ATPas 99.1 2E-10 6.7E-15 102.0 8.4 81 127-213 7-87 (111)
27 2ofg_X Zinc-transporting ATPas 99.1 5.1E-10 1.7E-14 99.3 9.9 83 43-139 5-87 (111)
28 4a4j_A Pacszia, cation-transpo 99.0 6.5E-10 2.2E-14 89.2 8.8 67 46-113 2-68 (69)
29 3fry_A Probable copper-exporti 99.0 5.8E-10 2E-14 90.7 6.4 66 127-197 4-69 (73)
30 1osd_A MERP, hypothetical prot 99.0 1.6E-09 5.5E-14 87.5 8.8 67 129-195 4-70 (72)
31 2l3m_A Copper-ION-binding prot 99.0 1.6E-09 5.5E-14 87.2 8.2 67 127-193 4-70 (71)
32 3iwl_A Copper transport protei 99.0 1.2E-09 4.2E-14 87.3 7.3 64 129-197 3-66 (68)
33 2l3m_A Copper-ION-binding prot 99.0 2.5E-09 8.4E-14 86.1 9.2 69 43-111 2-70 (71)
34 3fry_A Probable copper-exporti 99.0 7.8E-10 2.7E-14 89.9 6.2 66 44-114 3-68 (73)
35 3cjk_B Copper-transporting ATP 99.0 2.6E-09 9E-14 87.1 9.3 68 129-196 3-70 (75)
36 1y3j_A Copper-transporting ATP 98.9 1.8E-09 6.2E-14 88.7 8.3 69 128-196 3-71 (77)
37 3iwl_A Copper transport protei 98.9 1.2E-09 4.1E-14 87.4 7.0 66 45-115 1-66 (68)
38 1kvi_A Copper-transporting ATP 98.9 2.5E-09 8.5E-14 88.3 8.6 69 127-195 7-75 (79)
39 1cpz_A Protein (COPZ); copper 98.9 2.9E-09 9.9E-14 84.8 8.3 65 131-195 3-67 (68)
40 2g9o_A Copper-transporting ATP 98.9 2.4E-09 8.2E-14 91.0 7.9 70 129-198 4-76 (90)
41 2xmw_A PACS-N, cation-transpor 98.9 3.1E-09 1.1E-13 85.4 8.2 66 129-195 4-69 (71)
42 1aw0_A Menkes copper-transport 98.9 2.7E-09 9.2E-14 86.1 7.7 67 129-195 4-70 (72)
43 1q8l_A Copper-transporting ATP 98.9 3.5E-09 1.2E-13 88.6 8.3 70 128-197 9-78 (84)
44 2kt2_A Mercuric reductase; nme 98.9 3.2E-09 1.1E-13 85.0 7.3 64 131-195 3-66 (69)
45 1yg0_A COP associated protein; 98.9 4.9E-09 1.7E-13 82.9 8.2 63 130-193 3-65 (66)
46 2qif_A Copper chaperone COPZ; 98.9 5.9E-09 2E-13 82.9 8.2 64 130-193 4-67 (69)
47 1osd_A MERP, hypothetical prot 98.9 6.9E-09 2.3E-13 83.7 8.6 68 46-113 3-70 (72)
48 1opz_A Potential copper-transp 98.8 9.6E-09 3.3E-13 83.7 9.3 72 42-113 2-73 (76)
49 1opz_A Potential copper-transp 98.8 7.8E-09 2.7E-13 84.3 8.1 68 128-195 6-73 (76)
50 1kvi_A Copper-transporting ATP 98.8 7.2E-09 2.5E-13 85.4 8.0 70 44-113 6-75 (79)
51 1fvq_A Copper-transporting ATP 98.8 9.1E-09 3.1E-13 82.9 8.4 67 129-196 3-69 (72)
52 1yjr_A Copper-transporting ATP 98.8 5.1E-09 1.8E-13 85.2 6.9 67 129-195 5-71 (75)
53 2qif_A Copper chaperone COPZ; 98.8 1.3E-08 4.6E-13 80.8 9.1 66 46-111 2-67 (69)
54 1mwy_A ZNTA; open-faced beta-s 98.8 1E-08 3.5E-13 83.1 8.4 65 129-195 4-68 (73)
55 2g9o_A Copper-transporting ATP 98.8 1E-08 3.6E-13 87.0 8.7 70 46-115 3-75 (90)
56 2ldi_A Zinc-transporting ATPas 98.8 6.4E-09 2.2E-13 83.4 7.0 66 129-194 4-69 (71)
57 3cjk_B Copper-transporting ATP 98.8 1.5E-08 5E-13 82.6 9.1 67 47-113 3-69 (75)
58 1q8l_A Copper-transporting ATP 98.8 8.8E-09 3E-13 86.2 7.9 70 45-114 8-77 (84)
59 1y3j_A Copper-transporting ATP 98.8 4.9E-09 1.7E-13 86.0 5.7 69 45-113 2-70 (77)
60 1aw0_A Menkes copper-transport 98.8 1.1E-08 3.7E-13 82.5 7.7 67 47-113 4-70 (72)
61 1mwy_A ZNTA; open-faced beta-s 98.8 1.6E-08 5.3E-13 82.0 8.5 67 45-113 2-68 (73)
62 1jww_A Potential copper-transp 98.8 1.2E-08 4E-13 84.3 7.8 68 129-196 4-71 (80)
63 2xmw_A PACS-N, cation-transpor 98.8 1.6E-08 5.3E-13 81.2 8.2 66 46-112 3-68 (71)
64 1cpz_A Protein (COPZ); copper 98.8 1.7E-08 5.7E-13 80.3 8.0 64 49-112 3-66 (68)
65 2ldi_A Zinc-transporting ATPas 98.8 1.7E-08 5.7E-13 80.9 7.6 66 46-111 3-68 (71)
66 2kkh_A Putative heavy metal tr 98.8 3.2E-08 1.1E-12 84.9 9.8 74 41-114 11-84 (95)
67 2roe_A Heavy metal binding pro 98.8 1.4E-08 4.7E-13 80.5 6.9 62 131-195 3-64 (66)
68 1yg0_A COP associated protein; 98.7 2.2E-08 7.6E-13 79.0 7.9 64 47-111 2-65 (66)
69 2kkh_A Putative heavy metal tr 98.7 3.4E-08 1.2E-12 84.7 9.4 70 127-196 15-84 (95)
70 1cc8_A Protein (metallochapero 98.7 3.1E-08 1E-12 80.3 8.5 64 128-195 5-69 (73)
71 1fvq_A Copper-transporting ATP 98.7 2.2E-08 7.4E-13 80.7 7.4 66 47-113 3-68 (72)
72 2kt2_A Mercuric reductase; nme 98.7 2.5E-08 8.6E-13 79.6 7.2 64 49-113 3-66 (69)
73 1cc8_A Protein (metallochapero 98.7 4.3E-08 1.5E-12 79.5 8.7 65 45-113 4-69 (73)
74 1jww_A Potential copper-transp 98.7 2.6E-08 8.8E-13 82.2 7.3 69 45-113 2-70 (80)
75 1yjr_A Copper-transporting ATP 98.7 2.6E-08 8.9E-13 80.9 6.6 66 47-112 5-70 (75)
76 2kyz_A Heavy metal binding pro 98.7 1.3E-08 4.4E-13 80.9 4.6 61 130-195 3-63 (67)
77 2k2p_A Uncharacterized protein 98.7 2.3E-08 8E-13 83.6 5.8 64 127-193 21-84 (85)
78 2xmm_A SSR2857 protein, ATX1; 98.6 3.7E-08 1.3E-12 77.1 6.1 61 130-193 3-63 (64)
79 2crl_A Copper chaperone for su 98.6 1.5E-07 5.2E-12 81.0 10.0 68 127-198 18-85 (98)
80 2roe_A Heavy metal binding pro 98.6 4.9E-08 1.7E-12 77.2 6.0 61 49-112 3-63 (66)
81 2k2p_A Uncharacterized protein 98.6 4.9E-08 1.7E-12 81.6 6.2 64 45-111 21-84 (85)
82 2xmm_A SSR2857 protein, ATX1; 98.6 5.8E-08 2E-12 76.0 6.2 61 48-111 3-63 (64)
83 2crl_A Copper chaperone for su 98.6 1.9E-07 6.5E-12 80.4 9.6 68 45-116 18-85 (98)
84 2kyz_A Heavy metal binding pro 98.6 4.4E-08 1.5E-12 77.8 5.0 61 48-113 3-63 (67)
85 4fe3_A Cytosolic 5'-nucleotida 98.4 2.2E-08 7.5E-13 105.9 -0.2 43 802-844 139-181 (297)
86 2aj0_A Probable cadmium-transp 98.3 5E-07 1.7E-11 72.5 4.9 60 129-195 4-63 (71)
87 2aj0_A Probable cadmium-transp 98.3 1E-06 3.5E-11 70.6 6.5 60 47-113 4-63 (71)
88 3j09_A COPA, copper-exporting 98.2 1.9E-06 6.4E-11 101.9 7.8 67 129-195 3-69 (723)
89 1qup_A Superoxide dismutase 1 98.2 4.7E-06 1.6E-10 82.8 9.4 68 128-199 6-73 (222)
90 1qup_A Superoxide dismutase 1 98.0 1E-05 3.5E-10 80.4 8.9 66 46-115 6-71 (222)
91 1jk9_B CCS, copper chaperone f 98.0 9.6E-06 3.3E-10 81.8 8.2 68 128-199 7-74 (249)
92 1jk9_B CCS, copper chaperone f 97.9 1.7E-05 5.9E-10 80.0 8.1 88 46-142 7-94 (249)
93 3gwi_A Magnesium-transporting 97.3 0.00086 2.9E-08 63.6 9.5 127 664-804 3-165 (170)
94 3n07_A 3-deoxy-D-manno-octulos 94.1 0.009 3.1E-07 58.1 -0.1 63 782-844 23-92 (195)
95 1l6r_A Hypothetical protein TA 93.9 0.028 9.7E-07 56.0 3.2 57 785-844 6-62 (227)
96 1k1e_A Deoxy-D-mannose-octulos 93.0 0.085 2.9E-06 50.2 4.9 61 784-844 8-75 (180)
97 4gxt_A A conserved functionall 92.0 0.11 3.8E-06 56.0 4.7 51 793-843 210-260 (385)
98 3mn1_A Probable YRBI family ph 91.7 0.13 4.3E-06 49.5 4.2 45 794-844 42-86 (189)
99 3n1u_A Hydrolase, HAD superfam 90.7 0.046 1.6E-06 52.7 0.0 63 782-844 17-86 (191)
100 3ij5_A 3-deoxy-D-manno-octulos 90.4 0.2 6.8E-06 49.1 4.3 44 795-844 73-116 (211)
101 3fvv_A Uncharacterized protein 89.6 0.36 1.2E-05 47.6 5.5 41 804-844 92-132 (232)
102 3mmz_A Putative HAD family hyd 88.8 0.25 8.7E-06 46.7 3.6 33 812-844 47-79 (176)
103 1nnl_A L-3-phosphoserine phosp 88.3 0.36 1.2E-05 47.4 4.4 42 803-844 85-126 (225)
104 2wm8_A MDP-1, magnesium-depend 88.1 0.53 1.8E-05 44.8 5.4 41 804-844 68-109 (187)
105 2p9j_A Hypothetical protein AQ 87.5 0.5 1.7E-05 43.7 4.7 61 784-844 9-76 (162)
106 3n28_A Phosphoserine phosphata 87.1 0.43 1.5E-05 50.4 4.5 41 804-844 178-218 (335)
107 2pr7_A Haloacid dehalogenase/e 86.7 0.11 3.7E-06 46.4 -0.5 56 785-844 3-58 (137)
108 3ewi_A N-acylneuraminate cytid 85.9 0.13 4.6E-06 48.3 -0.3 44 792-843 30-75 (168)
109 4eze_A Haloacid dehalogenase-l 85.5 0.5 1.7E-05 49.5 3.8 41 804-844 179-219 (317)
110 2r8e_A 3-deoxy-D-manno-octulos 85.1 1.4 4.9E-05 41.8 6.7 63 782-844 24-93 (188)
111 4gwb_A Peptide methionine sulf 84.6 1.6 5.4E-05 40.3 6.2 48 140-187 9-71 (168)
112 3e8m_A Acylneuraminate cytidyl 83.5 0.89 3E-05 42.0 4.3 33 812-844 39-71 (164)
113 3ib6_A Uncharacterized protein 82.5 1.2 4.1E-05 42.3 4.9 41 804-844 34-77 (189)
114 1wr8_A Phosphoglycolate phosph 82.2 1.1 3.9E-05 44.1 4.7 57 785-844 4-60 (231)
115 2hsz_A Novel predicted phospha 82.0 1.2 4E-05 44.3 4.8 42 803-844 113-154 (243)
116 3p96_A Phosphoserine phosphata 81.4 1 3.5E-05 49.1 4.4 41 804-844 256-296 (415)
117 3qgm_A P-nitrophenyl phosphata 81.3 1.8 6E-05 43.7 5.9 57 784-844 8-67 (268)
118 1fvg_A Peptide methionine sulf 80.6 2.2 7.4E-05 40.5 5.6 48 140-187 50-116 (199)
119 2obb_A Hypothetical protein; s 79.6 2.3 7.7E-05 38.4 5.2 40 805-844 25-67 (142)
120 2nyv_A Pgpase, PGP, phosphogly 79.3 1.7 5.8E-05 42.4 4.8 42 803-844 82-123 (222)
121 1xvi_A MPGP, YEDP, putative ma 79.0 1.6 5.6E-05 44.4 4.7 59 783-844 8-66 (275)
122 3m1y_A Phosphoserine phosphata 79.0 1 3.5E-05 43.5 3.1 42 803-844 74-115 (217)
123 2gmw_A D,D-heptose 1,7-bisphos 78.9 2.2 7.6E-05 41.3 5.4 40 804-843 50-104 (211)
124 1nwa_A Peptide methionine sulf 78.5 2.8 9.6E-05 39.7 5.6 47 140-186 32-93 (203)
125 3bqh_A PILB, peptide methionin 77.9 2.6 8.9E-05 39.8 5.2 47 140-186 9-74 (193)
126 2j89_A Methionine sulfoxide re 77.9 2.8 9.7E-05 41.0 5.6 47 140-186 101-166 (261)
127 3kd3_A Phosphoserine phosphohy 77.5 1.8 6E-05 41.6 4.3 40 805-844 83-122 (219)
128 1ff3_A Peptide methionine sulf 77.3 2.8 9.4E-05 40.1 5.3 48 140-187 49-115 (211)
129 3l8h_A Putative haloacid dehal 76.9 2.6 9E-05 39.3 5.2 39 804-842 27-80 (179)
130 2v50_A Multidrug resistance pr 76.7 1E+02 0.0035 37.7 20.6 144 44-189 41-210 (1052)
131 2fpr_A Histidine biosynthesis 76.6 2 6.9E-05 40.3 4.2 41 804-844 42-97 (176)
132 4as2_A Phosphorylcholine phosp 76.2 5.9 0.0002 41.3 8.1 72 770-841 108-180 (327)
133 2pib_A Phosphorylated carbohyd 76.2 2.9 9.9E-05 39.8 5.4 42 803-844 83-124 (216)
134 1rku_A Homoserine kinase; phos 75.9 2.3 7.7E-05 40.7 4.5 40 804-844 69-108 (206)
135 2fea_A 2-hydroxy-3-keto-5-meth 75.8 1.5 5.2E-05 43.3 3.3 39 803-843 76-114 (236)
136 3pgv_A Haloacid dehalogenase-l 75.7 2.1 7.3E-05 43.7 4.5 62 780-844 17-78 (285)
137 1rkq_A Hypothetical protein YI 75.4 1.9 6.3E-05 44.1 3.9 57 785-844 6-62 (282)
138 3m9l_A Hydrolase, haloacid deh 75.0 2.7 9.2E-05 40.1 4.8 41 804-844 70-110 (205)
139 4ap9_A Phosphoserine phosphata 73.7 0.79 2.7E-05 43.5 0.5 40 804-844 79-118 (201)
140 1l7m_A Phosphoserine phosphata 72.8 2.3 7.8E-05 40.6 3.7 41 804-844 76-116 (211)
141 2no4_A (S)-2-haloacid dehaloge 72.8 3.7 0.00013 40.3 5.3 41 804-844 105-145 (240)
142 3e58_A Putative beta-phosphogl 72.5 3.3 0.00011 39.4 4.7 41 804-844 89-129 (214)
143 3nvb_A Uncharacterized protein 72.2 2.5 8.5E-05 45.1 3.9 69 772-840 210-292 (387)
144 4ex6_A ALNB; modified rossman 71.7 2.9 9.9E-05 40.8 4.2 42 803-844 103-144 (237)
145 3s6j_A Hydrolase, haloacid deh 70.9 4 0.00014 39.6 5.0 41 804-844 91-131 (233)
146 1zrn_A L-2-haloacid dehalogena 70.4 3.7 0.00013 39.9 4.7 41 804-844 95-135 (232)
147 3kbb_A Phosphorylated carbohyd 70.3 4.9 0.00017 38.6 5.4 41 804-844 84-124 (216)
148 3e0m_A Peptide methionine sulf 69.8 5.7 0.00019 40.4 5.7 48 140-187 9-73 (313)
149 2o2x_A Hypothetical protein; s 69.6 2.9 0.0001 40.6 3.6 41 803-843 55-110 (218)
150 2hcf_A Hydrolase, haloacid deh 69.0 3.8 0.00013 39.7 4.4 40 805-844 94-134 (234)
151 3mpo_A Predicted hydrolase of 68.6 7.8 0.00027 39.0 6.8 58 784-844 5-62 (279)
152 1qyi_A ZR25, hypothetical prot 68.3 4.7 0.00016 43.1 5.1 42 803-844 214-255 (384)
153 3sd7_A Putative phosphatase; s 68.3 2.9 9.8E-05 41.0 3.3 42 803-844 109-150 (240)
154 3kzx_A HAD-superfamily hydrola 68.2 2.9 9.9E-05 40.7 3.3 41 804-844 103-143 (231)
155 2hoq_A Putative HAD-hydrolase 67.4 4.7 0.00016 39.5 4.7 41 804-844 94-134 (241)
156 3ixz_A Potassium-transporting 67.4 35 0.0012 41.6 13.3 203 406-627 152-364 (1034)
157 3um9_A Haloacid dehalogenase, 67.3 5.4 0.00019 38.5 5.1 42 803-844 95-136 (230)
158 3pdw_A Uncharacterized hydrola 67.1 6.2 0.00021 39.5 5.6 57 784-844 6-65 (266)
159 1nrw_A Hypothetical protein, h 66.9 5.8 0.0002 40.4 5.4 57 785-844 5-61 (288)
160 3umb_A Dehalogenase-like hydro 66.8 4.9 0.00017 38.9 4.7 42 803-844 98-139 (233)
161 2b30_A Pvivax hypothetical pro 65.9 3.3 0.00011 42.7 3.2 56 784-842 27-85 (301)
162 2zg6_A Putative uncharacterize 65.5 3.3 0.00011 40.2 3.0 40 804-844 95-134 (220)
163 3epr_A Hydrolase, haloacid deh 64.9 5.4 0.00018 40.0 4.6 57 784-844 5-64 (264)
164 1vjr_A 4-nitrophenylphosphatas 64.2 6.1 0.00021 39.6 4.9 57 784-844 17-76 (271)
165 4dw8_A Haloacid dehalogenase-l 64.2 6.8 0.00023 39.5 5.3 57 784-843 5-61 (279)
166 3mc1_A Predicted phosphatase, 64.0 4 0.00014 39.4 3.3 42 803-844 85-126 (226)
167 2pq0_A Hypothetical conserved 64.0 5.6 0.00019 39.6 4.5 57 785-844 4-60 (258)
168 1te2_A Putative phosphatase; s 63.9 7.4 0.00025 37.2 5.3 41 804-844 94-134 (226)
169 3nuq_A Protein SSM1, putative 63.8 9 0.00031 38.6 6.1 42 803-844 141-184 (282)
170 3cnh_A Hydrolase family protei 63.1 5.7 0.00019 37.5 4.2 40 804-844 86-125 (200)
171 3pct_A Class C acid phosphatas 62.3 4.3 0.00015 40.6 3.2 42 803-844 100-145 (260)
172 2go7_A Hydrolase, haloacid deh 61.8 6.2 0.00021 37.0 4.2 40 804-844 85-124 (207)
173 3dnp_A Stress response protein 61.2 7.3 0.00025 39.5 4.8 58 784-844 6-63 (290)
174 2om6_A Probable phosphoserine 61.2 8.5 0.00029 37.1 5.2 41 804-844 99-142 (235)
175 4eek_A Beta-phosphoglucomutase 61.1 6.7 0.00023 38.9 4.4 42 803-844 109-150 (259)
176 3pim_A Peptide methionine sulf 60.7 5 0.00017 37.6 3.0 47 140-186 26-99 (187)
177 3dao_A Putative phosphatse; st 60.3 5 0.00017 40.8 3.4 62 779-843 16-78 (283)
178 1fvg_A Peptide methionine sulf 60.2 10 0.00034 35.9 5.0 49 215-263 51-118 (199)
179 3d6j_A Putative haloacid dehal 59.5 7.7 0.00026 37.0 4.5 39 806-844 91-129 (225)
180 2hi0_A Putative phosphoglycola 58.4 6.1 0.00021 38.8 3.5 39 805-843 111-149 (240)
181 4gwb_A Peptide methionine sulf 58.2 20 0.00068 33.0 6.5 49 58-106 9-72 (168)
182 2i7d_A 5'(3')-deoxyribonucleot 57.7 2.2 7.4E-05 40.6 0.0 40 803-842 72-112 (193)
183 3ocu_A Lipoprotein E; hydrolas 57.4 4.8 0.00016 40.4 2.5 42 803-844 100-145 (262)
184 3kc2_A Uncharacterized protein 57.2 5.8 0.0002 41.9 3.3 57 784-844 13-73 (352)
185 3iru_A Phoshonoacetaldehyde hy 55.6 9.2 0.00031 38.1 4.4 40 804-843 111-150 (277)
186 2oda_A Hypothetical protein ps 55.3 9.7 0.00033 36.2 4.3 35 804-838 36-70 (196)
187 3bqh_A PILB, peptide methionin 55.2 12 0.00041 35.2 4.6 49 215-263 10-77 (193)
188 2fi1_A Hydrolase, haloacid deh 54.8 12 0.00042 34.6 4.9 39 805-844 83-121 (190)
189 2ah5_A COG0546: predicted phos 54.3 6.4 0.00022 37.7 2.8 40 804-844 84-123 (210)
190 2i33_A Acid phosphatase; HAD s 54.3 8.3 0.00028 38.7 3.7 42 803-844 100-144 (258)
191 4dx5_A Acriflavine resistance 54.2 3.7E+02 0.013 32.7 20.1 145 44-189 41-210 (1057)
192 2p11_A Hypothetical protein; p 53.9 6.5 0.00022 38.3 2.9 40 803-843 95-134 (231)
193 3ne5_A Cation efflux system pr 53.8 3.7E+02 0.013 32.6 21.6 144 45-191 53-222 (1054)
194 3nas_A Beta-PGM, beta-phosphog 53.6 13 0.00043 35.9 5.0 39 804-844 92-130 (233)
195 3ddh_A Putative haloacid dehal 53.3 10 0.00034 36.4 4.1 41 804-844 105-146 (234)
196 2j89_A Methionine sulfoxide re 53.3 15 0.0005 36.1 5.0 49 215-263 102-169 (261)
197 2gfh_A Haloacid dehalogenase-l 52.4 14 0.00047 36.9 5.1 40 804-844 121-160 (260)
198 3dv9_A Beta-phosphoglucomutase 51.3 11 0.00037 36.7 4.0 41 803-844 107-147 (247)
199 3n28_A Phosphoserine phosphata 50.1 16 0.00053 38.1 5.2 48 797-844 36-94 (335)
200 1yns_A E-1 enzyme; hydrolase f 49.7 18 0.00062 36.0 5.5 38 803-840 129-166 (261)
201 3qxg_A Inorganic pyrophosphata 48.1 12 0.00042 36.4 3.8 40 803-843 108-147 (243)
202 2oyc_A PLP phosphatase, pyrido 47.4 19 0.00065 36.8 5.3 57 784-844 21-80 (306)
203 1xpj_A Hypothetical protein; s 47.1 14 0.00047 32.2 3.6 28 804-831 24-51 (126)
204 2i6x_A Hydrolase, haloacid deh 47.0 8.8 0.0003 36.4 2.5 36 804-840 89-124 (211)
205 2hdo_A Phosphoglycolate phosph 46.9 7.5 0.00026 36.9 1.9 40 804-844 83-122 (209)
206 3qnm_A Haloacid dehalogenase-l 46.7 17 0.00057 35.0 4.6 40 804-844 107-146 (240)
207 1qq5_A Protein (L-2-haloacid d 46.4 17 0.00059 35.7 4.7 39 804-844 93-131 (253)
208 1swv_A Phosphonoacetaldehyde h 46.3 14 0.00047 36.7 3.9 40 804-843 103-142 (267)
209 3e0m_A Peptide methionine sulf 44.4 23 0.0008 35.9 5.1 49 215-263 10-75 (313)
210 1rlm_A Phosphatase; HAD family 44.3 9 0.00031 38.5 2.1 56 785-843 4-60 (271)
211 2pke_A Haloacid delahogenase-l 44.3 17 0.00057 35.7 4.2 40 804-844 112-151 (251)
212 1jdq_A TM006 protein, hypothet 44.2 1E+02 0.0035 25.3 8.3 56 48-113 27-82 (98)
213 2hx1_A Predicted sugar phospha 44.0 23 0.00079 35.6 5.2 57 784-844 14-73 (284)
214 1nwa_A Peptide methionine sulf 43.9 41 0.0014 31.9 6.3 49 58-106 32-95 (203)
215 2raq_A Conserved protein MTH88 43.7 66 0.0023 26.2 6.5 69 127-196 6-79 (97)
216 1q92_A 5(3)-deoxyribonucleotid 43.5 5.3 0.00018 37.9 0.3 40 803-842 74-114 (197)
217 1jdq_A TM006 protein, hypothet 43.4 1.1E+02 0.0036 25.3 8.2 58 130-197 27-84 (98)
218 2w43_A Hypothetical 2-haloalka 43.4 11 0.00039 35.4 2.7 39 804-844 74-112 (201)
219 1ff3_A Peptide methionine sulf 43.4 39 0.0013 32.2 6.2 59 42-106 39-116 (211)
220 2z51_A NIFU-like protein 2, ch 43.3 70 0.0024 28.9 7.6 119 98-234 14-152 (154)
221 3rfu_A Copper efflux ATPase; a 42.5 3E+02 0.01 31.9 14.9 86 530-627 318-404 (736)
222 3k1z_A Haloacid dehalogenase-l 42.3 17 0.00057 36.1 3.8 40 804-844 106-145 (263)
223 2hhl_A CTD small phosphatase-l 41.1 26 0.00088 33.3 4.7 42 802-844 66-107 (195)
224 3ed5_A YFNB; APC60080, bacillu 40.7 26 0.0009 33.5 4.9 41 803-844 102-142 (238)
225 1y8a_A Hypothetical protein AF 40.6 19 0.00064 37.4 4.0 39 804-843 103-141 (332)
226 2wf7_A Beta-PGM, beta-phosphog 39.3 20 0.00068 33.9 3.7 38 804-843 91-128 (221)
227 2ght_A Carboxy-terminal domain 38.4 31 0.0011 32.2 4.7 41 803-844 54-94 (181)
228 3u26_A PF00702 domain protein; 38.3 28 0.00094 33.3 4.6 40 804-844 100-139 (234)
229 2qlt_A (DL)-glycerol-3-phospha 38.3 23 0.00079 35.4 4.1 40 805-844 115-155 (275)
230 3zvl_A Bifunctional polynucleo 38.2 24 0.00081 38.1 4.4 39 805-843 88-138 (416)
231 2b0c_A Putative phosphatase; a 37.7 4.1 0.00014 38.7 -1.7 30 804-833 91-120 (206)
232 2x3d_A SSO6206; unknown functi 37.3 64 0.0022 26.2 5.5 54 143-196 20-78 (96)
233 3lvj_C Sulfurtransferase TUSA; 36.8 1.5E+02 0.0052 23.2 8.2 57 130-196 11-67 (82)
234 1ccw_A Protein (glutamate muta 36.2 92 0.0031 27.4 7.3 68 777-844 25-114 (137)
235 1ltq_A Polynucleotide kinase; 35.5 23 0.00077 36.1 3.6 32 801-832 185-216 (301)
236 2raq_A Conserved protein MTH88 35.3 1.2E+02 0.0042 24.7 6.9 66 202-268 7-77 (97)
237 2x3d_A SSO6206; unknown functi 34.4 1E+02 0.0036 25.0 6.3 52 217-268 20-76 (96)
238 2v50_A Multidrug resistance pr 34.2 91 0.0031 38.1 9.2 120 143-262 62-209 (1052)
239 3l5k_A Protein GS1, haloacid d 34.1 38 0.0013 32.9 4.9 34 803-836 111-144 (250)
240 2jsx_A Protein NAPD; TAT, proo 33.5 1.3E+02 0.0045 24.6 7.2 16 222-237 61-76 (95)
241 2ho4_A Haloacid dehalogenase-l 33.3 51 0.0017 32.1 5.7 56 784-843 7-65 (259)
242 4dx5_A Acriflavine resistance 33.0 1.5E+02 0.005 36.3 10.8 119 143-262 62-209 (1057)
243 1cn3_F Fragment of coat protei 32.7 17 0.00058 21.3 1.1 18 16-33 1-18 (29)
244 3fzq_A Putative hydrolase; YP_ 31.7 25 0.00086 34.9 3.1 57 785-844 6-62 (274)
245 2l69_A Rossmann 2X3 fold prote 31.3 1.6E+02 0.0056 23.4 6.9 88 167-271 3-105 (134)
246 3pim_A Peptide methionine sulf 31.2 79 0.0027 29.5 6.0 60 41-106 15-101 (187)
247 3hz7_A Uncharacterized protein 31.1 1.1E+02 0.0037 24.5 6.2 66 131-208 3-70 (87)
248 3f9r_A Phosphomannomutase; try 30.9 34 0.0012 33.7 3.9 49 785-836 5-53 (246)
249 3bpd_A Uncharacterized protein 30.5 50 0.0017 27.0 3.9 68 127-195 6-78 (100)
250 4dcc_A Putative haloacid dehal 29.3 40 0.0014 32.2 4.1 34 804-838 112-145 (229)
251 2amy_A PMM 2, phosphomannomuta 29.3 37 0.0013 33.2 3.9 53 783-842 5-57 (246)
252 3lvj_C Sulfurtransferase TUSA; 29.1 1.5E+02 0.0051 23.3 6.7 56 48-113 11-66 (82)
253 3ff4_A Uncharacterized protein 28.2 45 0.0015 28.8 3.7 15 810-824 95-109 (122)
254 1u02_A Trehalose-6-phosphate p 28.2 35 0.0012 33.3 3.4 54 786-840 3-58 (239)
255 3umg_A Haloacid dehalogenase; 28.2 47 0.0016 32.0 4.4 39 804-843 116-154 (254)
256 1je3_A EC005, hypothetical 8.6 28.0 1.6E+02 0.0055 24.1 6.8 57 47-113 27-83 (97)
257 2rbk_A Putative uncharacterize 27.9 17 0.00058 36.1 1.0 52 787-842 5-57 (261)
258 3bpd_A Uncharacterized protein 27.5 90 0.0031 25.5 4.9 66 202-268 7-77 (100)
259 1v95_A Nuclear receptor coacti 26.3 1.3E+02 0.0043 26.3 6.1 48 796-843 11-61 (130)
260 3smv_A S-(-)-azetidine-2-carbo 26.2 48 0.0016 31.5 4.0 38 804-842 99-136 (240)
261 1at0_A 17-hedgehog; developmen 26.1 1.5E+02 0.0052 26.2 7.0 21 450-470 83-103 (145)
262 2b82_A APHA, class B acid phos 26.0 31 0.0011 33.0 2.5 28 805-832 89-116 (211)
263 2x4d_A HLHPP, phospholysine ph 25.5 74 0.0025 31.0 5.4 61 784-844 12-75 (271)
264 1je3_A EC005, hypothetical 8.6 24.2 1.9E+02 0.0064 23.7 6.6 57 130-196 28-84 (97)
265 2jmz_A Hypothetical protein MJ 23.9 53 0.0018 30.7 3.6 27 450-476 112-138 (186)
266 3l7y_A Putative uncharacterize 23.7 41 0.0014 34.1 3.0 57 784-843 37-94 (304)
267 2wfc_A Peroxiredoxin 5, PRDX5; 23.5 93 0.0032 28.3 5.2 54 771-843 54-110 (167)
268 2i2x_B MTAC, methyltransferase 23.1 85 0.0029 31.1 5.2 66 777-843 145-224 (258)
269 3ewi_A N-acylneuraminate cytid 22.5 34 0.0012 31.5 1.9 25 641-665 3-27 (168)
270 3gi1_A LBP, laminin-binding pr 22.2 2.6E+02 0.009 27.9 8.7 53 791-843 196-252 (286)
271 2yxb_A Coenzyme B12-dependent 21.8 1.1E+02 0.0039 27.6 5.3 53 792-844 69-123 (161)
272 1yv9_A Hydrolase, haloacid deh 21.7 57 0.002 32.0 3.6 57 784-844 5-65 (264)
273 2fue_A PMM 1, PMMH-22, phospho 21.5 54 0.0018 32.4 3.3 50 783-836 12-61 (262)
274 2k1g_A Lipoprotein SPR; soluti 21.0 37 0.0013 30.0 1.7 21 452-472 61-81 (135)
275 3mng_A Peroxiredoxin-5, mitoch 20.9 1E+02 0.0035 28.3 4.9 16 772-787 67-82 (173)
276 4f82_A Thioredoxin reductase; 20.8 1.4E+02 0.0048 27.6 5.7 30 814-843 76-106 (176)
277 3umc_A Haloacid dehalogenase; 20.8 68 0.0023 30.9 3.9 39 804-843 120-158 (254)
278 1tp9_A Peroxiredoxin, PRX D (t 20.6 1.1E+02 0.0039 27.3 5.1 54 771-843 58-114 (162)
279 2c4n_A Protein NAGD; nucleotid 20.0 1.3E+02 0.0044 28.5 5.8 55 785-843 4-61 (250)
No 1
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.5e-93 Score=846.24 Aligned_cols=573 Identities=37% Similarity=0.591 Sum_probs=507.1
Q ss_pred eeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecCcccccccc
Q 003131 203 KILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMNPFARMTSR 282 (845)
Q Consensus 203 ~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~~~~ 282 (845)
+.++.|+||+|++|+.++|+.+++.+||.++++|+.++++.|+||+..++.+++.+.+++.| |+....+.....+
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~G---y~~~~~~~~~~~~-- 77 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG---YGVVDEQAAVSAE-- 77 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHC---CEESSCCCCCCCC--
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcC---Ccccccccccchh--
Confidence 46799999999999999999999999999999999999999999999999999999999999 7664332211111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcCC
Q 003131 283 DSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGS 362 (845)
Q Consensus 283 ~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~ 362 (845)
.++.++++++++.++++++|+++++++ .. ++...|+++++++|++||+|+|||++||+++++++
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~ 141 (723)
T 3j09_A 78 -VEHLSRMKRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRT 141 (723)
T ss_dssp -CCCCCCSCCCSSSTTTTHHHHHHHTTS-SC--------------SSSSCCSCCSTHHHHHHHHHHHHHHHTCCTTTTCS
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHH-hc--------------cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCC
Confidence 011122334455566677776655431 11 11234567788999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEe
Q 003131 363 TNMDVLVALGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVK 442 (845)
Q Consensus 363 ~~md~L~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~ 442 (845)
+|||+|+++|+.++|+||++.++.... ....||++++++++++++|+++|.++++|+++.+++|.++.|++++|+
T Consensus 142 ~~md~l~~l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~-- 216 (723)
T 3j09_A 142 LNMDVMYSMGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI-- 216 (723)
T ss_dssp TTSCSSCSCHHHHHHHHHHHHHHTTTT---CCCCCCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEE--
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEE--
Confidence 999999999999999999998875321 122389999999999999999999999999999999999999999999
Q ss_pred cCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEE
Q 003131 443 DKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQAT 522 (845)
Q Consensus 443 ~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~ 522 (845)
||| ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.++++|+
T Consensus 217 -r~g---~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~pv~K~~g~~v~~Gt~~~~g~~~~~v~ 292 (723)
T 3j09_A 217 -RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRAT 292 (723)
T ss_dssp -ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEE
T ss_pred -ECC---EEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCeEEecccccCCCcceeecCCCeeccceEEecCcEEEEEE
Confidence 888 7799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHh
Q 003131 523 KVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSI 602 (845)
Q Consensus 523 ~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 602 (845)
++|.+|.+++|.+++++++.+++|+|+.+|+++.+|+|++++++++++++|++.. ..++..++.+++
T Consensus 293 ~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~-------------~~~~~~~~~~~i 359 (723)
T 3j09_A 293 RVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA-------------HAPLLFAFTTLI 359 (723)
T ss_dssp ECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST-------------TCTTCCSHHHHH
T ss_pred EecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------CCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988775532 123445678899
Q ss_pred hhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHH
Q 003131 603 SVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTL 682 (845)
Q Consensus 603 ~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~ 682 (845)
++++++|||+|++++|+++..++.+++++|+++|+++++|.+|++|++|||||||||+|+|+|.++...+ .+.++++.+
T Consensus 360 ~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~-~~~~~~l~~ 438 (723)
T 3j09_A 360 AVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELLRL 438 (723)
T ss_dssp HHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESS-SCHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCC-CCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999874 577889999
Q ss_pred HhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhh
Q 003131 683 VASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLN 762 (845)
Q Consensus 683 ~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~ 762 (845)
+++++..++||+++|+++++...+. ......++++.+|+|+.+ ..+.+|+++++.
T Consensus 439 aa~~e~~s~hP~~~Ai~~~a~~~~~---------------------~~~~~~~~~~~~g~g~~~----~~~~~g~~~~~~ 493 (723)
T 3j09_A 439 AAIAERRSEHPIAEAIVKKALEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLME 493 (723)
T ss_dssp HHHHHTTCCSHHHHHHHHHHHHTTC---------------------CCCSCCCCEEETTTEEEE----TTEEEECHHHHH
T ss_pred HHHHhccCCCchhHHHHHHHHhcCC---------------------CcCCccceEEecCCceEE----EEEEECCHHHHH
Confidence 9999999999999999999987632 123445677888999877 678899999999
Q ss_pred hcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131 763 ESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
+.+...+++..+..++++.+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++|
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lg 573 (723)
T 3j09_A 494 DFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN 573 (723)
T ss_dssp HTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHT
T ss_pred hcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcC
Confidence 98888888888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 003131 843 VI 844 (845)
Q Consensus 843 I~ 844 (845)
|+
T Consensus 574 i~ 575 (723)
T 3j09_A 574 LD 575 (723)
T ss_dssp CS
T ss_pred Cc
Confidence 86
No 2
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=9.5e-90 Score=806.55 Aligned_cols=516 Identities=37% Similarity=0.567 Sum_probs=467.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcC
Q 003131 282 RDSEETSNMFRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNG 361 (845)
Q Consensus 282 ~~~~~~~~~~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~ 361 (845)
.+.++.+.++++++.++++++|+++++|..+..+ . .-.+.+..|++++|++|++||+|||||++||++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~ 144 (736)
T 3rfu_A 73 VVSPEYLDMRRRFWIALMLTIPVVILEMGGHGLK---H-----FISGNGSSWIQLLLATPVVLWGGWPFFKRGWQSLKTG 144 (736)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTT---S-----SCSTTHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---h-----hccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3456778889999999999999988877532210 0 0123467899999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhcC-------CCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCC
Q 003131 362 STNMDVLVALGTSAAYFYSVGALLYGVVTG-------FWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAP 434 (845)
Q Consensus 362 ~~~md~L~~l~~~~a~~~s~~~~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~ 434 (845)
.+|||+|+++|+.+||+||++.++...+.+ +..+.||++++++++++++|+++|.++++|+++++++|.++.|
T Consensus 145 ~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p 224 (736)
T 3rfu_A 145 QLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVP 224 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999988643321 1246799999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeec
Q 003131 435 ATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLH 514 (845)
Q Consensus 435 ~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~ 514 (845)
+++++++ +|| ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+++||++.+
T Consensus 225 ~~a~vv~--~dg---~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VDES~LTGES~Pv~K~~gd~v~~Gt~~~~ 299 (736)
T 3rfu_A 225 ESAHRIK--EDG---SEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAKEASAKVIGATINQT 299 (736)
T ss_dssp CEEEEEE--TTE---EEEEEETTTCCTTCEECCCSSEECCSCEEECSSCEEEECSSSTTCSSCEEECTTCEECTTCEEES
T ss_pred CEEEEEe--cCC---EEEEEEHhhCCCCCEEEECCCCcccccEEEEECceEeeecccCCccccEEeccCCcCCCceEecc
Confidence 9999883 377 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchH
Q 003131 515 GVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHF 594 (845)
Q Consensus 515 g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 594 (845)
|.++++|+++|.+|.+++|.+++++++.+|+|+|+.+|+++.+|+|+++++++++|++|++.+. ...|
T Consensus 300 G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~------------~~~~ 367 (736)
T 3rfu_A 300 GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP------------QPAL 367 (736)
T ss_dssp CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS------------SSST
T ss_pred ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CchH
Confidence 9999999999999999999999999999999999999999999999999999999999987641 1135
Q ss_pred HHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC
Q 003131 595 VFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM 674 (845)
Q Consensus 595 ~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~ 674 (845)
..++.+++++++++|||+|++++|++++.++++++++|+++|+++++|.+|++|+||||||||||+|+|+|.++. .++.
T Consensus 368 ~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~-~~~~ 446 (736)
T 3rfu_A 368 SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIV-TDDF 446 (736)
T ss_dssp THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEE-ESSS
T ss_pred HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEE-ecCC
Confidence 678899999999999999999999999999999999999999999999999999999999999999999999998 5667
Q ss_pred ChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEE
Q 003131 675 DRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVL 754 (845)
Q Consensus 675 ~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~ 754 (845)
+.++++.++++++..++||+++|++++++..+. ....+.+|++.+|+|+.+.++|..+.
T Consensus 447 ~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~---------------------~~~~~~~f~~~~g~gv~~~~~g~~~~ 505 (736)
T 3rfu_A 447 VEDNALALAAALEHQSEHPLANAIVHAAKEKGL---------------------SLGSVEAFEAPTGKGVVGQVDGHHVA 505 (736)
T ss_dssp CHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCC---------------------CCCCCSCCCCCTTTEEEECSSSSCEE
T ss_pred CHHHHHHHHHHHhhcCCChHHHHHHHHHHhcCC---------------------CccCcccccccCCceEEEEECCEEEE
Confidence 888999999999999999999999999976631 22345678889999999999999999
Q ss_pred EeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHH
Q 003131 755 VGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTA 834 (845)
Q Consensus 755 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA 834 (845)
+|+++++.+.+.+.+ ++.+..+++..+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|
T Consensus 506 ~G~~~~~~~~~~~~~-~~~~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a 584 (736)
T 3rfu_A 506 IGNARLMQEHGGDNA-PLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTA 584 (736)
T ss_dssp EESHHHHHHHCCCCH-HHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred EcCHHHHHHcCCChh-HHHHHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 999999988876643 4566678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCC
Q 003131 835 HAVAREVCVID 845 (845)
Q Consensus 835 ~~iA~~~GI~~ 845 (845)
.++|+++||++
T Consensus 585 ~~ia~~lgi~~ 595 (736)
T 3rfu_A 585 EAVAGTLGIKK 595 (736)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHHcCCCE
Confidence 99999999963
No 3
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.1e-84 Score=759.89 Aligned_cols=491 Identities=40% Similarity=0.644 Sum_probs=443.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhhHHHHhhhccCCCchHHHHHHHHHHHhhhccChHHHHHHHHHHHcCCCCchHHHH
Q 003131 291 FRLFISSLFLSIPVFFIRVICPHIPLVYALLLWRCGPFLMGDWLNWALVSVVQFVIGKRFYTAAGRALRNGSTNMDVLVA 370 (845)
Q Consensus 291 ~~~~~~a~ilal~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~ 370 (845)
+++++.++++++|+++++|. ++ ++...|+++++++|++||+|+|||++||++++++++|||+|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~l~~~~~~~~g~~~~~~a~~~l~~~~~~md~L~~ 71 (645)
T 3j08_A 7 KRKLYVAAFAGVLLLFLAHF-IS--------------LPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYS 71 (645)
T ss_dssp SSSSSSSSCSHHHHHHHTTT-CC--------------SCCCSSSCCCTHHHHHHHHHHHHHHHTCCTTTTCSGGGCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHH-hh--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 34566677888888776542 11 1223467788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceee
Q 003131 371 LGTSAAYFYSVGALLYGVVTGFWSPTYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE 450 (845)
Q Consensus 371 l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~ 450 (845)
+|+.++|+||++.++.... ....||++++++++++++|+++|.++++|+++.+++|.++.|++++|+ ||| +
T Consensus 72 l~~~~a~~~s~~~~~~~~~---~~~~~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~---r~g---~ 142 (645)
T 3j08_A 72 MGVGAAFLASVLSTAGVLP---REYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVI---RDG---K 142 (645)
T ss_dssp CHHHHHHHHHHHHHHHHCC---SCSSCCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEE---ETT---E
T ss_pred HHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE---ECC---E
Confidence 9999999999998876421 122489999999999999999999999999999999999999999999 888 7
Q ss_pred eEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHH
Q 003131 451 EREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVL 530 (845)
Q Consensus 451 ~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~ 530 (845)
+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.++++|+++|.+|.+
T Consensus 143 ~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~~VdeS~LTGES~Pv~K~~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l 222 (645)
T 3j08_A 143 EIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLL 222 (645)
T ss_dssp EEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTCEECTTCEECSSCEEEEEEECGGGSHH
T ss_pred EEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcEEEEcccccCCCCceecCCCCEeeccEEEecCcEEEEEEEcCCccHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecc
Q 003131 531 SQIISLVETAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACP 610 (845)
Q Consensus 531 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P 610 (845)
++|.+++++++.+++|+|+.+|+++.+|+|++++++++++++|++... .++..++.+++++++++||
T Consensus 223 ~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~-------------~~~~~~~~~~i~vlvia~P 289 (645)
T 3j08_A 223 AQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAH-------------APLLFAFTTLIAVLVVACP 289 (645)
T ss_dssp HHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCS-------------CSCCCTTTTTHHHHHHHSC
T ss_pred HHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------CcHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999887754321 1233456778999999999
Q ss_pred cccchhhHHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccC
Q 003131 611 CALGLATPTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASS 690 (845)
Q Consensus 611 ~~L~la~p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s 690 (845)
|+|++++|+++..++.+++|+|+++|+++++|.+|++|++|||||||||+|+|+|.+++..+ .+.++++.+++.++..+
T Consensus 290 ~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~-~~~~~~l~~aa~~e~~s 368 (645)
T 3j08_A 290 CAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN-GDERELLRLAAIAERRS 368 (645)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESS-SCHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCC-CCHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999874 57888999999999999
Q ss_pred CChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCCh
Q 003131 691 EHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPD 770 (845)
Q Consensus 691 ~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~ 770 (845)
.||+++|++++++..+. ......++++.+|+|+.+ ..+.+|+++++.+.+...++
T Consensus 369 ~hPla~Aiv~~a~~~g~---------------------~~~~~~~~~~~~g~g~~~----~~v~~g~~~~~~~~~~~~~~ 423 (645)
T 3j08_A 369 EHPIAEAIVKKALEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSN 423 (645)
T ss_dssp CSHHHHHHHHHHHHTTC---------------------CCCSCCCCEEETTTEEEE----TTEEEECHHHHHHTTCCCCH
T ss_pred CChhHHHHHHHHHhcCC---------------------CcCCccceEEecCCceEE----EEEEECCHHHHHhcCCCccH
Confidence 99999999999987632 123345677888999877 67889999999998888888
Q ss_pred hhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 771 HVESFVVELEESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 771 ~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++++..+++..+|++++++++|++++|+++++|++|++++++|++||++|++++|+|||+..+|.++|+++||+
T Consensus 424 ~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~ 497 (645)
T 3j08_A 424 EVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 497 (645)
T ss_dssp HHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999985
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=4.2e-67 Score=625.30 Aligned_cols=414 Identities=19% Similarity=0.313 Sum_probs=347.5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCc
Q 003131 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA 475 (845)
Q Consensus 396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPa 475 (845)
.|++ +++++++++++.+++.++++|+.+++++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+|||
T Consensus 140 ~~~~-~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPa 212 (920)
T 1mhs_A 140 DWVD-FGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVL---RDG---TLKEIEAPEVVPGDILQVEEGTIIPA 212 (920)
T ss_dssp CSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEE---CSS---SEEECCTTTSCTTSEEEECTTCBCSS
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEE---ECC---EEEEEEHHHcCCCCEEEeCCCCcccc
Confidence 3554 3456677788899999999999999999999999999999 888 67899999999999999999999999
Q ss_pred cEEEEecce--eeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHH
Q 003131 476 DGIVVWGTS--YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADF 553 (845)
Q Consensus 476 Dg~ll~G~~--~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~ 553 (845)
||+|++|++ .||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+++.+++
T Consensus 213 Dg~ll~g~~~l~VDES~LTGES~PV~K~~gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~ 292 (920)
T 1mhs_A 213 DGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292 (920)
T ss_dssp EEEEEEESSCCEEBCTTTSSCCCCEECCSSCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHH
T ss_pred ceEEEecCceeeeeccccCCCCcceEecCCCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHH
Confidence 999999986 799999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCe
Q 003131 554 VASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633 (845)
Q Consensus 554 ~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gi 633 (845)
++.+++++++++++++|+.|++. ..++..++.+++++++++|||+|++++|++++.++.+|+|+|+
T Consensus 293 i~~~l~~~~~~~~~i~~~~~~~~--------------~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~i 358 (920)
T 1mhs_A 293 IGTILLILVIFTLLIVWVSSFYR--------------SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKA 358 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTT--------------TCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--------------CCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCe
Confidence 99999988877776655433221 2357788999999999999999999999999999999999999
Q ss_pred EEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhh-hhccCC--ChhHHHHHHHHhhcCcCCC
Q 003131 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVAS-AEASSE--HPLAKAVVEYARHFHFFDD 710 (845)
Q Consensus 634 lvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~s~--~p~~~al~~~~~~~~~~~~ 710 (845)
++|+++++|.||++|+||||||||||+|+|+|.+++..++.+.++++..++. .+..+. ||++.|+++++...+...
T Consensus 359 lvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al~~~~~~~~~~~- 437 (920)
T 1mhs_A 359 IVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAK- 437 (920)
T ss_dssp CCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHHHHHHHHSSSCC-
T ss_pred EEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHHHHHHHhcccch-
Confidence 9999999999999999999999999999999999877665555565544332 233455 999999999887653100
Q ss_pred CCCCCCCCCCccccCCCccccccccccccCCCceEEEEc---Ce--EEEEeehhhhhhcC---CCCCh----hhHHHHHH
Q 003131 711 PSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS---GK--QVLVGNRKLLNESG---ITIPD----HVESFVVE 778 (845)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~---g~--~~~~g~~~~~~~~~---~~~~~----~~~~~~~~ 778 (845)
............+|++. ++++.+.++ |. .+.+|+++++.+.. .++++ .+.+..++
T Consensus 438 ------------~~~~~~~~~~~~pF~s~-~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~ 504 (920)
T 1mhs_A 438 ------------SVLSKYKVLQFHPFDPV-SKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAE 504 (920)
T ss_dssp ------------GGGSCCCEEEEEEEETT-TTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHH
T ss_pred ------------hhccccceeEEeeccCC-CCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHH
Confidence 00001122334455544 667777773 54 35579999876532 22333 24456678
Q ss_pred HHHccCeEEEEEECC-----eEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 779 LEESARTGILVAYDD-----NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 779 ~~~~g~~~l~va~~~-----~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+|+|++++|++. +|+|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 505 ~a~~G~RvL~vA~~~~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~ 575 (920)
T 1mhs_A 505 FATRGFRSLGVARKRGEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLG 575 (920)
T ss_dssp HHTSSCCCCEECCCSSSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSS
T ss_pred HHhCCCEEEEEEEeccccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCC
Confidence 899999999999863 899999999999999999999999999999999999999999999999995
No 5
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.6e-61 Score=593.00 Aligned_cols=416 Identities=20% Similarity=0.271 Sum_probs=338.2
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131 397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD 476 (845)
Q Consensus 397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD 476 (845)
++..+++++++++++..++.++++|+.+.+++|.++.|..++|+ ||| ++++|++++|+|||+|.|++||+||||
T Consensus 134 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~---Rdg---~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 207 (1028)
T 2zxe_A 134 NLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVI---RDG---EKSTINAEFVVAGDLVEVKGGDRIPAD 207 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEEETTCBCCSE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE---ECC---EEEEEEHHHCCcCCEEEECCCCEeece
Confidence 44456667777888999999999999999999999999999999 888 679999999999999999999999999
Q ss_pred EEEEecc-eeeeccccCCcceeeeccCCC----------ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCC
Q 003131 477 GIVVWGT-SYVNESMVTGEAVPVLKEINS----------PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA 545 (845)
Q Consensus 477 g~ll~G~-~~Vdes~LTGEs~pv~k~~~~----------~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 545 (845)
|+|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.++++|++||.+|.+|+|.+++.+++.+++
T Consensus 208 ~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t 287 (1028)
T 2zxe_A 208 LRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRT 287 (1028)
T ss_dssp EEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCC
T ss_pred EEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCC
Confidence 9999996 579999999999999999886 49999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH
Q 003131 546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT 625 (845)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~ 625 (845)
|+|+.+++++.+++++++++++++++++++.+ .+|..++.+++++++++|||+|++++|++++.+.
T Consensus 288 ~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~ 353 (1028)
T 2zxe_A 288 PIAIEIEHFIHIITGVAVFLGVSFFILSLILG--------------YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTA 353 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--------------CCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 99999999999999999999888887755431 2467788899999999999999999999999999
Q ss_pred HHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCC-----------------Ch--hhHHHHHhhh
Q 003131 626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKM-----------------DR--GEFLTLVASA 686 (845)
Q Consensus 626 ~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-----------------~~--~~~~~~~~~~ 686 (845)
.+|+++|++||+++++|.||++|+||||||||||+|+|+|.+++..+.. +. .+++..++.+
T Consensus 354 ~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc 433 (1028)
T 2zxe_A 354 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALC 433 (1028)
T ss_dssp HHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHS
T ss_pred HHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998764210 11 1344444432
Q ss_pred h------cc----------CCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEE--
Q 003131 687 E------AS----------SEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFI-- 748 (845)
Q Consensus 687 ~------~~----------s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~-- 748 (845)
. .. .++|++.|++++++..+.. ...... ........+|++..++.....-
T Consensus 434 ~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~---------~~~~~~---~~~~~~~~pF~s~rk~msvi~~~~ 501 (1028)
T 2zxe_A 434 NRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS---------VQGMRD---RNPKIVEIPFNSTNKYQLSIHENE 501 (1028)
T ss_dssp CCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSC---------HHHHHH---HSCEEEEECCCTTTCEEEEEEECS
T ss_pred CCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCC---------HHHHHH---hCceEEEeccCcccceEEEEEecc
Confidence 1 11 2467788999998764210 000000 0111223355555444333322
Q ss_pred ---cCe--EEEEeehhhhhhc-------CC--CCC----hhhHHHHHHHHHccCeEEEEEE-------------------
Q 003131 749 ---SGK--QVLVGNRKLLNES-------GI--TIP----DHVESFVVELEESARTGILVAY------------------- 791 (845)
Q Consensus 749 ---~g~--~~~~g~~~~~~~~-------~~--~~~----~~~~~~~~~~~~~g~~~l~va~------------------- 791 (845)
+|. .+..|+++.+.+. |. ++. +.+.+..++++.+|+|++++|+
T Consensus 502 ~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~ 581 (1028)
T 2zxe_A 502 KSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEP 581 (1028)
T ss_dssp CTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTT
T ss_pred CCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhh
Confidence 132 3456777654331 11 122 2345567788999999999986
Q ss_pred -----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 792 -----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 792 -----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.+||+++||.
T Consensus 582 ~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~ 639 (1028)
T 2zxe_A 582 NFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 639 (1028)
T ss_dssp CSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred hhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 35899999999999999999999999999999999999999999999999996
No 6
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=8.6e-66 Score=615.03 Aligned_cols=411 Identities=18% Similarity=0.279 Sum_probs=332.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCc
Q 003131 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPA 475 (845)
Q Consensus 396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPa 475 (845)
.|++. ++++++++++.+++.++++|+++++++|.++.|.+++|+ ||| ++++|++++|+|||+|.|++||+|||
T Consensus 92 ~~~~~-~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~---RdG---~~~~I~~~~Lv~GDiV~l~~Gd~IPa 164 (885)
T 3b8c_A 92 DWQDF-VGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVL---RDG---KWSEQEAAILVPGDIVSIKLGDIIPA 164 (885)
T ss_dssp CCTTH-HHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCC---CSS---CSCCCCTTTTCTTSBCCCCSSCCCSS
T ss_pred cHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEee
Confidence 56654 466677788999999999999999999999999999998 888 56899999999999999999999999
Q ss_pred cEEEEecce-eeeccccCCcceeeeccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCChhhHHHHHH
Q 003131 476 DGIVVWGTS-YVNESMVTGEAVPVLKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKAPIQKFADFV 554 (845)
Q Consensus 476 Dg~ll~G~~-~Vdes~LTGEs~pv~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~ 554 (845)
||+|++|++ .||||+|||||.|+.|++|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++ +.+++|+|+.++++
T Consensus 165 Dg~ll~g~~l~VdES~LTGES~Pv~K~~g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i 243 (885)
T 3b8c_A 165 DARLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAI 243 (885)
T ss_dssp CCCCCCSSCBCCCCCSTTCCSSCCCBSSCCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHH
T ss_pred ceEEEEcCcccccccccCCCCcceEecCCCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHH
Confidence 999999997 5999999999999999999999999999999999999999999999999988876 67899999999999
Q ss_pred hhhHHHHH-HHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHHHHhcCe
Q 003131 555 ASIFVPIV-VTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGV 633 (845)
Q Consensus 555 ~~~~~~~~-~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~~~~~gi 633 (845)
++++++.+ +.+++++++.|++. ..+|..++.+++++++++|||+||+++|++++.+..+|+|+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~i 309 (885)
T 3b8c_A 244 GNFCICSIAIGMVIEIIVMYPIQ--------------RRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 309 (885)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTT--------------CSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc--------------cCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCe
Confidence 98865433 32333333322211 1234457888999999999999999999999999999999999
Q ss_pred EEecchHHHhhcCCcEEEecCCCccccCCeEEEEEE--ec-cCCChhhHHHHHhhhhcc-CCChhHHHHHHHHhhcCcCC
Q 003131 634 LIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAK--VF-TKMDRGEFLTLVASAEAS-SEHPLAKAVVEYARHFHFFD 709 (845)
Q Consensus 634 lvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~--~~-~~~~~~~~~~~~~~~~~~-s~~p~~~al~~~~~~~~~~~ 709 (845)
++|+++++|.||++|+||||||||||+|+|+|.+.. .+ .+.+.++++.+++.++.. ++||++.|+++++....
T Consensus 310 lvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~--- 386 (885)
T 3b8c_A 310 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPK--- 386 (885)
T ss_dssp CCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTT---
T ss_pred EeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchh---
Confidence 999999999999999999999999999999997432 22 234567888888877764 89999999998765310
Q ss_pred CCCCCCCCCCCccccCCCccccccccccccCCCceEEE--EcCe--EEEEeehhhhhhcC---CCCChhhHHHHHHHHHc
Q 003131 710 DPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCF--ISGK--QVLVGNRKLLNESG---ITIPDHVESFVVELEES 782 (845)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~--~~g~--~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~ 782 (845)
. ... ........+|++..++..... .+|. .+.+|+++.+.+.+ ...++++.+..++++.+
T Consensus 387 ~---~~~----------~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~ 453 (885)
T 3b8c_A 387 E---ARA----------GIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAER 453 (885)
T ss_dssp C---CCC----------SSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTT
T ss_pred h---Hhh----------cCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhC
Confidence 0 000 000111222332222211000 1333 34468888665432 23456677778889999
Q ss_pred cCeEEEEEEC-------------CeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 783 ARTGILVAYD-------------DNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 783 g~~~l~va~~-------------~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
|+|++++|++ ++|+|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||.
T Consensus 454 G~rvl~vA~~~~~~~~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 454 GLRSLAVARQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528 (885)
T ss_dssp TCEEEEECCBCCCSSSSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred CCeEEEEEEeccccccccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence 9999999985 5899999999999999999999999999999999999999999999999994
No 7
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=9.7e-60 Score=578.46 Aligned_cols=416 Identities=20% Similarity=0.236 Sum_probs=335.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131 397 YFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPAD 476 (845)
Q Consensus 397 ~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaD 476 (845)
++..+++++++++++..+..++++|+.+++++|.++.|.+++|+ ||| ++++|++++|+|||||.|++||+||||
T Consensus 139 ~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~Vi---RdG---~~~~I~~~eLv~GDiV~l~~Gd~VPAD 212 (1034)
T 3ixz_A 139 NLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVI---RDG---DKFQINADQLVVGDLVEMKGGDRVPAD 212 (1034)
T ss_pred chhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEE---ECC---EEEEEEHHHCCCCcEEEEcCCceecCC
Confidence 44456677777888999999999999999999999999999999 888 779999999999999999999999999
Q ss_pred EEEEecce-eeeccccCCcceeeeccCC----------CceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhccCC
Q 003131 477 GIVVWGTS-YVNESMVTGEAVPVLKEIN----------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMSKA 545 (845)
Q Consensus 477 g~ll~G~~-~Vdes~LTGEs~pv~k~~~----------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 545 (845)
|+|++|.. .||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+|.+++.+.+.+++
T Consensus 213 ~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~t 292 (1034)
T 3ixz_A 213 IRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKT 292 (1034)
T ss_pred eEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCC
Confidence 99999986 5999999999999999765 458999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHH
Q 003131 546 PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVAT 625 (845)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~ 625 (845)
|+++.+++++.++.+++++++++.+++|++.+ .+|..++.+++++++++|||+|+++++++++.+.
T Consensus 293 pl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~ 358 (1034)
T 3ixz_A 293 PIAIEIEHFVDIIAGLAILFGATFFIVAMCIG--------------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTA 358 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHH
Confidence 99999999999999999888888887776542 3578889999999999999999999999999999
Q ss_pred HHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCC-------------------hhhHHHHHhhh
Q 003131 626 GVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMD-------------------RGEFLTLVASA 686 (845)
Q Consensus 626 ~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------------~~~~~~~~~~~ 686 (845)
.+|+++|+++|+++++|.||++++||||||||||+|+|+|.+++..+... ...++..++.+
T Consensus 359 ~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 359 KRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred HHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999987643210 01333333322
Q ss_pred hc----------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEc-
Q 003131 687 EA----------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFIS- 749 (845)
Q Consensus 687 ~~----------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~- 749 (845)
.. ..++|.+.|+++++...+..... . .. ........+|++..++.......
T Consensus 439 ~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~------~---~~---~~~~~~~~pF~s~rk~m~~v~~~~ 506 (1034)
T 3ixz_A 439 NRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG------Y---RE---RFPKVCEIPFNSTNKFQLSIHTLE 506 (1034)
T ss_pred ccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH------H---HH---hCcceEEeeecCCCceEEEEEEec
Confidence 11 13578999999988765310000 0 00 11112233454444432222211
Q ss_pred ----Ce--EEEEeehhhhhhc-------CCC--CC----hhhHHHHHHHHHccCeEEEEEE-------------------
Q 003131 750 ----GK--QVLVGNRKLLNES-------GIT--IP----DHVESFVVELEESARTGILVAY------------------- 791 (845)
Q Consensus 750 ----g~--~~~~g~~~~~~~~-------~~~--~~----~~~~~~~~~~~~~g~~~l~va~------------------- 791 (845)
|. .+..|+++.+.+. +.. .. +.+.+...+++.+|+|++++|+
T Consensus 507 ~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~ 586 (1034)
T 3ixz_A 507 DPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAM 586 (1034)
T ss_pred CCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhh
Confidence 11 2334555543321 211 22 2245566788999999999886
Q ss_pred -----CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 792 -----DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 792 -----~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
|++|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||.
T Consensus 587 ~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~ 644 (1034)
T 3ixz_A 587 NFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644 (1034)
T ss_pred hccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 45799999999999999999999999999999999999999999999999995
No 8
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=1.3e-59 Score=576.78 Aligned_cols=438 Identities=19% Similarity=0.258 Sum_probs=330.3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHccCCCeEEEEEecCCCceee-eEEeecCCcCCCCEEEEcCCCccC
Q 003131 396 TYFETSAMLITFVLFGKYLEILAKGKTSDAIKKLVELAPATALLVVKDKVGKCIE-EREIDALLIQSGDTLKVLPGTKLP 474 (845)
Q Consensus 396 ~~~~~~~~i~~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~-~~~i~~~~l~~GDii~v~~G~~vP 474 (845)
.|++.. +++++++++..++.++++|+++++++|.++.|.+++|+ |||+ + .++|++++|+|||+|.|++||+||
T Consensus 88 ~~~~~~-~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~---R~g~--~~~~~I~~~~lv~GDiV~l~~Gd~IP 161 (995)
T 3ar4_A 88 AFVEPF-VILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVY---RADR--KSVQRIKARDIVPGDIVEVAVGDKVP 161 (995)
T ss_dssp SSHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEE---BTTC--SSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred hHHHhH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEE---eCCC--ceEEEEEHHHCCCCCEEEECCCCccc
Confidence 566644 44556677788888888889999999999999999999 7772 2 489999999999999999999999
Q ss_pred ccEEEEecc---eeeeccccCCcceeeeccCC-------------CceeccceeecceEEEEEEEecCccHHHHHHHHHH
Q 003131 475 ADGIVVWGT---SYVNESMVTGEAVPVLKEIN-------------SPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVE 538 (845)
Q Consensus 475 aDg~ll~G~---~~Vdes~LTGEs~pv~k~~~-------------~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~ 538 (845)
|||+|++|+ +.||||+|||||.|+.|+++ +.+|+||.+.+|.++++|++||.+|.+|+|.++++
T Consensus 162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 241 (995)
T 3ar4_A 162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241 (995)
T ss_dssp SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence 999997654 47999999999999999987 58999999999999999999999999999999999
Q ss_pred hhhccCChhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCC-CCCCcCCCCCchHHHHHHHHhhhheeecccccchhh
Q 003131 539 TAQMSKAPIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGA-YPEQWLPENGTHFVFALMFSISVVVIACPCALGLAT 617 (845)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~ 617 (845)
+++.+++|+|+.+++++.+++++++++++++|++|+.... .. ....|. ..+...+..++++++++|||+|++++
T Consensus 242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~ai~l~v~aiP~~Lp~~v 316 (995)
T 3ar4_A 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-DPVHGGSWI----RGAIYYFKIAVALAVAAIPEGLPAVI 316 (995)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-SCSSSSCHH----HHHHHHHHHHHHHHHHHSCTTHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchHH----HHHHHHHHHHHHHHHHhcCcchHHHH
Confidence 9999999999999999999999988888877665432110 00 000111 12345677899999999999999999
Q ss_pred HHHHHHHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccC-----------------CCh----
Q 003131 618 PTAVMVATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTK-----------------MDR---- 676 (845)
Q Consensus 618 p~~~~~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------------~~~---- 676 (845)
|++++.+..+|+++|+++|+++++|.||++|+||||||||||+|+|+|.+++..+. .++
T Consensus 317 t~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 396 (995)
T 3ar4_A 317 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEV 396 (995)
T ss_dssp HHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCE
T ss_pred HHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCcccc
Confidence 99999999999999999999999999999999999999999999999999875420 000
Q ss_pred ---------------hhHHHHHhhhhc-------------cCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCcc----cc
Q 003131 677 ---------------GEFLTLVASAEA-------------SSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSK----ES 724 (845)
Q Consensus 677 ---------------~~~~~~~~~~~~-------------~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~----~~ 724 (845)
.+++...+.+.. ..++|.+.|++.++++.+..+............. ..
T Consensus 397 ~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~ 476 (995)
T 3ar4_A 397 LKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVI 476 (995)
T ss_dssp EETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhh
Confidence 112222222111 1368999999999887654211100000000000 00
Q ss_pred CCCccccccccccccCCCceEEEE--cC-------eEEEEeehhhhhhcC---------CCCC----hhhHHHHHHH--H
Q 003131 725 TGSGWLLDVSDFSALPGRGIQCFI--SG-------KQVLVGNRKLLNESG---------ITIP----DHVESFVVEL--E 780 (845)
Q Consensus 725 ~~~~~~~~~~~~~~~~g~gi~~~~--~g-------~~~~~g~~~~~~~~~---------~~~~----~~~~~~~~~~--~ 780 (845)
..........+|++..++.-.... +| ..+..|+++.+.+.+ .+.+ +.+.+..+++ +
T Consensus 477 ~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 556 (995)
T 3ar4_A 477 RQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTG 556 (995)
T ss_dssp HHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHS
T ss_pred hhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhh
Confidence 001112233455554433211111 22 244567766543321 1122 1244556677 8
Q ss_pred HccCeEEEEEE-----------------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003131 781 ESARTGILVAY-----------------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAV 837 (845)
Q Consensus 781 ~~g~~~l~va~-----------------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~i 837 (845)
.+|+|++++|| |++|+|+++++|++|++++++|++||++||+++|+|||++.||.++
T Consensus 557 ~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~i 636 (995)
T 3ar4_A 557 RDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAI 636 (995)
T ss_dssp TTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred hccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHH
Confidence 89999999986 3479999999999999999999999999999999999999999999
Q ss_pred HHHcCCC
Q 003131 838 AREVCVI 844 (845)
Q Consensus 838 A~~~GI~ 844 (845)
|+++||.
T Consensus 637 a~~lgi~ 643 (995)
T 3ar4_A 637 CRRIGIF 643 (995)
T ss_dssp HHHHTSS
T ss_pred HHHcCcC
Confidence 9999995
No 9
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.95 E-value=2.7e-28 Score=215.79 Aligned_cols=111 Identities=50% Similarity=0.766 Sum_probs=106.2
Q ss_pred HHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceeeeccCCC
Q 003131 425 AIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPVLKEINS 504 (845)
Q Consensus 425 ~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv~k~~~~ 504 (845)
++++|.++.|..++++ ||| ++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|.+|+
T Consensus 2 al~~L~~l~p~~a~v~---r~g---~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~~vdeS~LTGEs~pv~k~~g~ 75 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVI---RDG---KEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGD 75 (113)
T ss_dssp HHHHHHHHSCSEEEEE---ETT---EEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCEEEECHHHHCCSSCEEECTTC
T ss_pred HHHHHhcCCCCEEEEE---ECC---EEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceEEEEccccCCCCccEEECCCC
Confidence 5678888999999999 788 6789999999999999999999999999999999999999999999999999999
Q ss_pred ceeccceeecceEEEEEEEecCccHHHHHHHHHHhhh
Q 003131 505 PVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541 (845)
Q Consensus 505 ~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 541 (845)
.+|+||++.+|.++++|+++|.+|.+++|.+++++++
T Consensus 76 ~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a~ 112 (113)
T 2hc8_A 76 EVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAM 112 (113)
T ss_dssp EECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHHH
T ss_pred EEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998875
No 10
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.95 E-value=3.2e-28 Score=219.45 Aligned_cols=123 Identities=47% Similarity=0.675 Sum_probs=107.8
Q ss_pred hhhHHHHHHHHHccCCCeEEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEecceeeeccccCCcceee
Q 003131 419 KGKTSDAIKKLVELAPATALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVWGTSYVNESMVTGEAVPV 498 (845)
Q Consensus 419 ~~k~~~~l~~l~~~~~~~~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~G~~~Vdes~LTGEs~pv 498 (845)
++|+.+++++|.++.|..+++++.++++....+++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~~vdeS~LTGEs~pv 81 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHSMVDESLITGEAMPV 81 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCCEEECTTTTCCSSCE
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccEEEEeccccCCCccE
Confidence 45788899999999999999994322332112578999999999999999999999999999999999999999999999
Q ss_pred eccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhh
Q 003131 499 LKEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQ 541 (845)
Q Consensus 499 ~k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 541 (845)
.|.+|+.+|+||++.+|.+.++|+++|.+|.+++|.+++++++
T Consensus 82 ~k~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a~ 124 (124)
T 2kij_A 82 AKKPGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEAQ 124 (124)
T ss_dssp ECCTTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTTC
T ss_pred EeCCCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999987653
No 11
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.82 E-value=6.1e-25 Score=229.37 Aligned_cols=173 Identities=29% Similarity=0.425 Sum_probs=151.4
Q ss_pred HHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHH
Q 003131 623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA 702 (845)
Q Consensus 623 ~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~ 702 (845)
.++++++|+||++|+++++|.++++++||||||||||+|+|.+.++. +.++++.++++++..|.||+++|+.+++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~-----~~~~~l~~~~~~e~~s~hp~a~ai~~~~ 78 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI-----GDSLSLAYAASVEALSSHPIAKAIVKYA 78 (263)
Confidence 56788999999999999999999999999999999999999999875 4567899999999999999999999887
Q ss_pred hhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHc
Q 003131 703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEES 782 (845)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (845)
+..+. ......++...+|.|+...+++..+.+|++. +
T Consensus 79 ~~~g~---------------------~~~~~~~~~~~~G~g~~~~~~~~~~~~G~~~----------------------~ 115 (263)
T 2yj3_A 79 KEQGV---------------------KILEVKDFKEISGIGVRGKISDKIIEVKKAE----------------------N 115 (263)
Confidence 65421 1234456788889999998888877777643 2
Q ss_pred cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+ ++++++..+.|.+.+.|+++|+++++|+.|++.|+++.|+|||+..++..+++++||.
T Consensus 116 ~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 176 (263)
T 2yj3_A 116 NND-IAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ 176 (263)
Confidence 345 7788899999999999999999999999999999999999999999999999999985
No 12
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.87 E-value=3.9e-21 Score=203.63 Aligned_cols=196 Identities=39% Similarity=0.621 Sum_probs=165.7
Q ss_pred HHHHHHHhcCeEEecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHH
Q 003131 623 VATGVGANNGVLIKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYA 702 (845)
Q Consensus 623 ~~~~~~~~~gilvk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~ 702 (845)
.+.++++|+||++|+++++|.++++++|+||||||||.+.+.+.+++..++ +.++++.++++++..+.||++.|+.+++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-~~~~~l~~~~~~e~~s~hp~~~a~~~~~ 86 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-DERELLRLAAIAERRSEHPIAEAIVKKA 86 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-CHHHHHHHHHHHTTTCCSHHHHHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-CHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999988877 8889999999999999999999999998
Q ss_pred hhcCcCCCCCCCCCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHc
Q 003131 703 RHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEES 782 (845)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 782 (845)
+..+. .......+....|.|+.. ..+.+|+..++...+.+.|+.+++....+..+
T Consensus 87 ~~~g~---------------------~~~~~~~~~~~~G~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (287)
T 3a1c_A 87 LEHGI---------------------ELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFGVAVSNEVELALEKLERE 141 (287)
T ss_dssp HHTTC---------------------CCCCCSCEEEETTTEEEE----TTEEEECHHHHHHTTCCCCHHHHHHHHHHHHT
T ss_pred HhcCC---------------------CccccccceeecCCCeEE----EEEEECCHHHHHhcCCCccHHHHHHHHHHHhC
Confidence 77642 011223455667887766 45666887777766666655666777788889
Q ss_pred cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
|.+++++++|+.+++.+...++++|++.++++.|++.|+++.++||++...+..+.+.+||.
T Consensus 142 g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 203 (287)
T 3a1c_A 142 AKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD 203 (287)
T ss_dssp TCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred CCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999985
No 13
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.82 E-value=9.3e-20 Score=172.84 Aligned_cols=145 Identities=38% Similarity=0.631 Sum_probs=128.3
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCC
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP 124 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 124 (845)
|.+..|.|+||+|++|+..+++.+.+++||..+.+++.++++.+.+++...+.+++.+.+++.||.+...... .
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~------~ 76 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDY------A 76 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCS------C
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeeccc------c
Confidence 5677899999999999999999999999999999999999999999876677889999999999987543210 0
Q ss_pred CceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 125 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
....+..+.|+||+|++|+++|+++|.+++||.++.+|+.++++.|.|++..++.++|.+.|+++||++.+
T Consensus 77 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 77 GSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp CSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred cccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 11235679999999999999999999999999999999999999999999888999999999999998764
No 14
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.80 E-value=1.3e-18 Score=165.29 Aligned_cols=139 Identities=35% Similarity=0.608 Sum_probs=126.2
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCC
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKP 124 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~ 124 (845)
+++..|.|+||+|++|+..+++.+.+++||..+.+++..+++.+.+++...+.+++.+.+++.||.+.
T Consensus 5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------------ 72 (151)
T 1p6t_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------------ 72 (151)
T ss_dssp CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------------
T ss_pred ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------------
Confidence 35667999999999999999999999999999999999999999887666678889999999999752
Q ss_pred CceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131 125 QGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (845)
Q Consensus 125 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 197 (845)
..+..+.|+||+|++|+++|++.|.+++||.++.+|+.++++.|.|+|..++.++|.+.|+++||.+.+..
T Consensus 73 --~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 143 (151)
T 1p6t_A 73 --TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 143 (151)
T ss_dssp --CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred --ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence 13467999999999999999999999999999999999999999999988899999999999999987644
No 15
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=164.45 Aligned_cols=141 Identities=33% Similarity=0.515 Sum_probs=128.3
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc--CCcceeE
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS--SGQDKIL 205 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~--~~~~~~~ 205 (845)
.+..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.+++.+.+++.||.+..... ....+..
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~ 83 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIE 83 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEEE
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeecccccccceeE
Confidence 45678999999999999999999999999999999999999999998878889999999999999875432 1235678
Q ss_pred EEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEe
Q 003131 206 LQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIR 271 (845)
Q Consensus 206 ~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 271 (845)
|.|.||+|++|+..+++.|++++||.++.+|+.++.+.|+|+|..++.+++.+.|++.| |.+.
T Consensus 84 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~ 146 (149)
T 2ew9_A 84 LTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIG---FHAS 146 (149)
T ss_dssp EEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHT---CEEE
T ss_pred EEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCC---CceE
Confidence 99999999999999999999999999999999999999999999899999999999999 7654
No 16
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.75 E-value=9.6e-18 Score=167.58 Aligned_cols=154 Identities=34% Similarity=0.562 Sum_probs=125.9
Q ss_pred CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcC---cchhhhcccC--
Q 003131 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAG---FEAEILAESS-- 118 (845)
Q Consensus 44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~~~~-- 118 (845)
.+.+..|.|+||+|++|++.|++++.+++||..+.+++..+++.+.+++...+.+++.+++++.| |.+.......
T Consensus 18 ~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~ 97 (202)
T 2rop_A 18 HVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGS 97 (202)
T ss_dssp --CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-------
T ss_pred ccEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccc
Confidence 34667899999999999999999999999999999999999999999877778889999999883 6553211000
Q ss_pred --------------C-CCCCCCceeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHH
Q 003131 119 --------------T-SGPKPQGTIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIA 183 (845)
Q Consensus 119 --------------~-~~~~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~ 183 (845)
. .........+..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.|++..++.++|.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~ 177 (202)
T 2rop_A 98 GTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELR 177 (202)
T ss_dssp ----------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHH
T ss_pred cccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHH
Confidence 0 0000011245789999999999999999999999999999999999999999999888999999
Q ss_pred HHHHhcCCceeeec
Q 003131 184 NAIEDAGFEASFVQ 197 (845)
Q Consensus 184 ~~i~~~G~~~~~~~ 197 (845)
+.|+++||.+....
T Consensus 178 ~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 178 AAIEDMGFEASVVS 191 (202)
T ss_dssp HHHHHHTSCEEEC-
T ss_pred HHHHHcCCceEEcC
Confidence 99999999987643
No 17
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.75 E-value=1.1e-17 Score=158.75 Aligned_cols=138 Identities=27% Similarity=0.447 Sum_probs=126.7
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCCcceeEEE
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQ 207 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~ 207 (845)
.+..+.|+||+|++|+.++++.+.+++||.++.+++.++++.+.|++...+.+++.+.+++.||.+. ..++.|.
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~------~~~~~~~ 79 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV------TEKAEFD 79 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC------CEEEEEE
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc------ccccEEE
Confidence 3457899999999999999999999999999999999999999999877788899999999999763 2467899
Q ss_pred EecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEeecC
Q 003131 208 VTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIRVMN 274 (845)
Q Consensus 208 v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~~~~ 274 (845)
|.||+|++|+..+++.|.+++||.++.+|+.++++.|+|+|..++.+++.+.|++.| |.+....
T Consensus 80 v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G---y~~~~~~ 143 (151)
T 1p6t_A 80 IEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG---YKLKLKG 143 (151)
T ss_dssp ESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHT---CCEEESC
T ss_pred ecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcC---CCeEEcC
Confidence 999999999999999999999999999999999999999999999999999999999 8766543
No 18
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.75 E-value=3.6e-17 Score=172.42 Aligned_cols=184 Identities=36% Similarity=0.574 Sum_probs=160.3
Q ss_pred EecchHHHhhcCCcEEEecCCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhcCcCCCCCCC
Q 003131 635 IKGGDALERAQKIKYVIFDKTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHFHFFDDPSLN 714 (845)
Q Consensus 635 vk~~~~~e~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~~~~~~~~~~ 714 (845)
+|+++++|.+++++.|+||++||||.|++.|.++..+++ +.++++.++++++..+.||+..++.+++...+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~------- 72 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-SEDELLQIAASLEARSEHPIAAAIVEEAEKRGF------- 72 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-CHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTC-------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-CHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCC-------
Confidence 589999999999999999999999999999999999887 889999999999999999999999999887632
Q ss_pred CCCCCCccccCCCccccccccccccCCCceEEEEcCeEEEEeehhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCe
Q 003131 715 PDGQSHSKESTGSGWLLDVSDFSALPGRGIQCFISGKQVLVGNRKLLNESGITIPDHVESFVVELEESARTGILVAYDDN 794 (845)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~ 794 (845)
.......+....|.|+...++|..+..|+..++...+...+.. ..++...+.+.+++++++.
T Consensus 73 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3skx_A 73 --------------GLTEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRELGIKTDES----VEKLKQQGKTVVFILKNGE 134 (280)
T ss_dssp --------------CCCCCEEEEEETTTEEEEEETTEEEEEECHHHHHHTTCCCCTT----HHHHHTTTCEEEEEEETTE
T ss_pred --------------CCCCccceeecCCCEEEEEECCEEEEEecHHHHHHcCCCchHH----HHHHHhCCCeEEEEEECCE
Confidence 1123345677789999999999999999999988877665532 3456778889999999999
Q ss_pred EEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 795 ~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++|.+.+.|+++|++.++++.|++.|+++.|+||++...+..+.+++|+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 184 (280)
T 3skx_A 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD 184 (280)
T ss_dssp EEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS
T ss_pred EEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh
Confidence 99999999999999999999999999999999999999999999999985
No 19
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=99.71 E-value=1.1e-16 Score=149.77 Aligned_cols=136 Identities=18% Similarity=0.254 Sum_probs=109.4
Q ss_pred CCCccccCCeEEEEEEeccCCChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcc--c
Q 003131 654 KTGTLTQGRATVTTAKVFTKMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGW--L 730 (845)
Q Consensus 654 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~ 730 (845)
..||+|-|++.++++.+.++.++++++.+++++|..|+||+++||+++++.. +.... ... .
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E~~SeHPla~AIv~~A~~~~~l~~~----------------~~~~~~ 76 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRER----------------DVQSLH 76 (156)
T ss_dssp --------CEEEEEEEECTTSCHHHHHHHHHHTTSSCCSHHHHHHHHHHHHHTTCCCC----------------CHHHHT
T ss_pred CCCceecCCCeEEEEEecCCCCHHHHHHHHHHHhCcCCCHHHHHHHHHHHHhcCCCcc----------------cccccc
Confidence 4799999999999999988889999999999999999999999999999875 31000 000 1
Q ss_pred cccccccccCC-CceEEEEcCeEEEEee----hhhhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCCC
Q 003131 731 LDVSDFSALPG-RGIQCFISGKQVLVGN----RKLLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADPV 805 (845)
Q Consensus 731 ~~~~~~~~~~g-~gi~~~~~g~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~l 805 (845)
.++.+|+..+| +|+ .++|..+.+|+ .+|+.+.++.+|+++++..++++.+|+++++|+.|++++|+|++.|++
T Consensus 77 ~~~~~F~a~~G~~Gv--~v~G~~v~vGn~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~i 154 (156)
T 1svj_A 77 ATFVPFTAQSRMSGI--NIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIV 154 (156)
T ss_dssp CEEEEEETTTTEEEE--EETTEEEEEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECC
T ss_pred cceeeccccCCCCeE--EECCEEEEEeCcHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCC
Confidence 23468899999 899 45999999999 678888899888778888889999999999999999999999999999
Q ss_pred Ch
Q 003131 806 KR 807 (845)
Q Consensus 806 r~ 807 (845)
||
T Consensus 155 K~ 156 (156)
T 1svj_A 155 KG 156 (156)
T ss_dssp CC
T ss_pred CC
Confidence 96
No 20
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.70 E-value=1.4e-16 Score=159.09 Aligned_cols=144 Identities=29% Similarity=0.523 Sum_probs=125.7
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhc---CCceeeecc-----
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS----- 198 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---G~~~~~~~~----- 198 (845)
..+..+.|+||+|++|+.+|++.|.+++||.++.+++.++++.|.|++...+.++|.+.++++ ||.+.....
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~~ 98 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSG 98 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC--------
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEecccccccc
Confidence 345679999999999999999999999999999999999999999999888899999999998 366532110
Q ss_pred --------------------CCcceeEEEEecccchhhhHHHHhhhccCCCceEEEeecCCCeEEEEeCCCCCChhhHHH
Q 003131 199 --------------------SGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFRFDKISGELEVLFDPEALSSRSLVD 258 (845)
Q Consensus 199 --------------------~~~~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~~~~~~i~~ 258 (845)
....+..|.|.||+|+.|+..|++.|..++||.++.+|+.++.+.|.|+|..++.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~ 178 (202)
T 2rop_A 99 TDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRA 178 (202)
T ss_dssp ---------------------CCEEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHH
T ss_pred ccccccccccccccccccccccceEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHH
Confidence 011457899999999999999999999999999999999999999999998899999999
Q ss_pred hhhhcCCCcceEeec
Q 003131 259 GIAGRSNGKFQIRVM 273 (845)
Q Consensus 259 ~i~~~g~~~~~~~~~ 273 (845)
.|++.| |.+...
T Consensus 179 ~i~~~G---y~~~~~ 190 (202)
T 2rop_A 179 AIEDMG---FEASVV 190 (202)
T ss_dssp HHHHHT---SCEEEC
T ss_pred HHHHcC---CceEEc
Confidence 999999 876554
No 21
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=99.70 E-value=3.7e-16 Score=151.16 Aligned_cols=129 Identities=36% Similarity=0.632 Sum_probs=112.6
Q ss_pred CccccCCeEEEEEEecc---CCChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcccc
Q 003131 656 GTLTQGRATVTTAKVFT---KMDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGWLL 731 (845)
Q Consensus 656 GTLT~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (845)
||||+|+|.|.++..+. .++.++++.+++++|..|+||+++||+++++.. +. ....
T Consensus 1 GTLT~G~p~V~~v~~~~~~~~~~~~~lL~laaa~E~~SeHPlA~AIv~~a~~~~~~--------------------~~~~ 60 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDT--------------------ETLG 60 (185)
T ss_dssp CCCCSCCCEEEEEEECSCTTTSCHHHHHHHHHHGGGSSSCHHHHHHHHHHHHHHTC--------------------SCCC
T ss_pred CCCcCCcEEEEEEEecCCcCCCCHHHHHHHHHHHHccCCCHHHHHHHHHHHhhcCC--------------------CCCC
Confidence 89999999999998874 357788999999999999999999999998753 10 0123
Q ss_pred ccccccccCCCceEEEEcC----------------------------------------------------eEEEEeehh
Q 003131 732 DVSDFSALPGRGIQCFISG----------------------------------------------------KQVLVGNRK 759 (845)
Q Consensus 732 ~~~~~~~~~g~gi~~~~~g----------------------------------------------------~~~~~g~~~ 759 (845)
.+.+|+..+|+|+++.++| .++++|+++
T Consensus 61 ~~~~f~~i~G~Gv~~~V~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~ 140 (185)
T 2kmv_A 61 TCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIIDAQISNALNAQQYKVLIGNRE 140 (185)
T ss_dssp CCBCCEEETTTEEEEEECCSGGGSSCSSCCCCSCCCCCCCCCCTTTTSCCCCCCCCCCCSTTTTTGGGSCCEEEEEECHH
T ss_pred CccceEEeccceEEEEECCccccccccccccccccccccccccccccccccccccccccccccccccCCCceEEEECCHH
Confidence 4678999999999999998 589999999
Q ss_pred hhhhcCCCCChhhHHHHHHHHHccCeEEEEEECCeEEEEEEeeCC
Q 003131 760 LLNESGITIPDHVESFVVELEESARTGILVAYDDNLIGVMGIADP 804 (845)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~lG~~~~~D~ 804 (845)
|+.++++.+++.....+.+++.+|.++++++.|++++|+|++.|+
T Consensus 141 ~m~~~gi~i~~~~~~~~~~~~~~G~T~V~vaidg~l~g~iavaD~ 185 (185)
T 2kmv_A 141 WMIRNGLVINNDVNDFMTEHERKGRTAVLVAVDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEETTEEEEEEEEECC
T ss_pred HHHHcCCCCCHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEEEcC
Confidence 999999988877777778888999999999999999999999995
No 22
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=99.58 E-value=1.5e-14 Score=137.98 Aligned_cols=126 Identities=37% Similarity=0.524 Sum_probs=108.4
Q ss_pred cccCCeEEEEEEeccC---CChhhHHHHHhhhhccCCChhHHHHHHHHhhc-CcCCCCCCCCCCCCCccccCCCcccccc
Q 003131 658 LTQGRATVTTAKVFTK---MDRGEFLTLVASAEASSEHPLAKAVVEYARHF-HFFDDPSLNPDGQSHSKESTGSGWLLDV 733 (845)
Q Consensus 658 LT~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~s~~p~~~al~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (845)
||+|+|.|.++..+.+ .+.++++.+++++|..|+||+++||+++++.. +. .....+
T Consensus 1 LT~G~p~V~~v~~~~~~~~~~~~~lL~laaslE~~SeHPlA~AIv~~a~~~~~~--------------------~~~~~~ 60 (165)
T 2arf_A 1 AGHMVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGT--------------------ETLGYC 60 (165)
T ss_dssp CCCCCCCEEEEEECCCTTTSCHHHHHHHHHHHHTTSCSTTHHHHHHHHHHHHTC--------------------CCCCCE
T ss_pred CCCceeEEEEEEeeCCcCCCCHHHHHHHHHHHHccCCChHHHHHHHHHHHhcCC--------------------CCCCCc
Confidence 8999999999987653 46788999999999999999999999998654 10 001346
Q ss_pred ccccccCCCceEEEEcCe-----------------------------------EEEEeehhhhhhcCCCCChhhHHHHHH
Q 003131 734 SDFSALPGRGIQCFISGK-----------------------------------QVLVGNRKLLNESGITIPDHVESFVVE 778 (845)
Q Consensus 734 ~~~~~~~g~gi~~~~~g~-----------------------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~ 778 (845)
.+|+.++|+|+++.++|. ++++|+++|+.++++.+++.....+..
T Consensus 61 ~~f~~i~G~Gv~a~v~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iGn~~~m~~~gi~~~~~~~~~~~~ 140 (165)
T 2arf_A 61 TDFQAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWLRRNGLTISSDVSDAMTD 140 (165)
T ss_dssp EEEEEETTTEEEEEEECHHHHHSCCCCCCCCCCCCSSSSCCCCCCCCCCCCEEEEEEECHHHHHHHHCSSCHHHHHHHHH
T ss_pred CceEEecCccEEEEEcCcccccccccccccccccccccccccccccccCCCceEEEEcCHHHHHhcCCCCCHHHHHHHHH
Confidence 789999999999999986 899999999999888887766666777
Q ss_pred HHHccCeEEEEEECCeEEEEEEeeC
Q 003131 779 LEESARTGILVAYDDNLIGVMGIAD 803 (845)
Q Consensus 779 ~~~~g~~~l~va~~~~~lG~~~~~D 803 (845)
++.+|.++++++.|++++|+|++.|
T Consensus 141 ~~~~G~T~v~va~dg~~~g~i~l~D 165 (165)
T 2arf_A 141 HEMKGQTAILVAIDGVLCGMIAIAD 165 (165)
T ss_dssp HHTTTSEEEEEEETTEEEEEEEECC
T ss_pred HHhCCCeEEEEEECCEEEEEEEEEC
Confidence 8889999999999999999999988
No 23
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.19 E-value=4.7e-11 Score=97.53 Aligned_cols=68 Identities=47% Similarity=0.730 Sum_probs=64.5
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
+..+.|+||+|++|+.+|+++|++++||.++.+|+.++++.|.|++..++.++|.+.|+++||++.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence 46789999999999999999999999999999999999999999998889999999999999998764
No 24
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.15 E-value=1.1e-10 Score=95.25 Aligned_cols=70 Identities=84% Similarity=1.210 Sum_probs=65.1
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (845)
|.+..|.|+||+|++|+..|++++++++||.++.+|+.++++.+.+++...+.+++.+++++.||.+++.
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEIL 70 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEE
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEc
Confidence 4567899999999999999999999999999999999999999999887789999999999999998654
No 25
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.12 E-value=1.5e-10 Score=93.01 Aligned_cols=66 Identities=27% Similarity=0.516 Sum_probs=62.0
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|+++|++++||.++.+|+.++++.|.| +...++++|.+.|++.||++.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 45789999999999999999999999999999999999999999 6778999999999999999864
No 26
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.09 E-value=2e-10 Score=102.02 Aligned_cols=81 Identities=32% Similarity=0.477 Sum_probs=73.6
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCCcceeEE
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILL 206 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~ 206 (845)
..+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++..++.++|.+.|+++||.+.. ....+
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~------~~~~l 80 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE------PKSSV 80 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC------CCCCC
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee------cceee
Confidence 345689999999999999999999999999999999999999999999878889999999999998764 23568
Q ss_pred EEecccc
Q 003131 207 QVTGVLC 213 (845)
Q Consensus 207 ~v~gm~c 213 (845)
.|.||.|
T Consensus 81 ~V~G~~~ 87 (111)
T 2ofg_X 81 TLNGHKH 87 (111)
T ss_dssp CCCCCCC
T ss_pred eccCccC
Confidence 9999999
No 27
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.06 E-value=5.1e-10 Score=99.34 Aligned_cols=83 Identities=31% Similarity=0.533 Sum_probs=72.9
Q ss_pred CCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCC
Q 003131 43 DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGP 122 (845)
Q Consensus 43 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~ 122 (845)
..+.+..|.|+||+|++|++.|++++.+++||..+.+|+.++++.+.+++...+.+++.++++++||.+...
T Consensus 5 ~~~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~~-------- 76 (111)
T 2ofg_X 5 SPLKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAEP-------- 76 (111)
T ss_dssp -CCEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEECC--------
T ss_pred CcceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeeec--------
Confidence 346678899999999999999999999999999999999999999999877678899999999999976421
Q ss_pred CCCceeeeccccCCccc
Q 003131 123 KPQGTIVGQYTIGGMTC 139 (845)
Q Consensus 123 ~~~~~~~~~~~v~gm~C 139 (845)
...+.|+||.|
T Consensus 77 ------~~~l~V~G~~~ 87 (111)
T 2ofg_X 77 ------KSSVTLNGHKH 87 (111)
T ss_dssp ------CCCCCCCCCCC
T ss_pred ------ceeeeccCccC
Confidence 23689999999
No 28
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.04 E-value=6.5e-10 Score=89.25 Aligned_cols=67 Identities=27% Similarity=0.542 Sum_probs=61.8
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
++..|.|+||+|++|+..|++++++++||.++.+|+.++++.+.| +...+.+++.+++++.||.+++
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 456799999999999999999999999999999999999999999 5678899999999999998753
No 29
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.98 E-value=5.8e-10 Score=90.68 Aligned_cols=66 Identities=24% Similarity=0.384 Sum_probs=61.0
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 197 (845)
..+..+.|+||+|++|+.+|+++|++ +||..+.+|+.++++.|.|+ +.++|.+.|+++||++.+..
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEECC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEecC
Confidence 45678999999999999999999999 99999999999999999998 68999999999999988754
No 30
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.97 E-value=1.6e-09 Score=87.48 Aligned_cols=67 Identities=28% Similarity=0.486 Sum_probs=62.8
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 4578999999999999999999999999999999999999999999888899999999999998764
No 31
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.96 E-value=1.6e-09 Score=87.24 Aligned_cols=67 Identities=34% Similarity=0.595 Sum_probs=62.5
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 193 (845)
..+..+.|+||+|++|+..|++.|.+++||.++.+++.++++.|.|++...+.++|.+.++++||.+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3456799999999999999999999999999999999999999999988888999999999999975
No 32
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.95 E-value=1.2e-09 Score=87.32 Aligned_cols=64 Identities=23% Similarity=0.463 Sum_probs=58.6
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 197 (845)
+..|.| ||+|++|+.+|+++|++++|| ++.+|+.++++.|.++ .++++|.+.|++.||++.+..
T Consensus 3 ~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 3 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEEE
T ss_pred eEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEecC
Confidence 457899 999999999999999999999 9999999999999973 578999999999999998643
No 33
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.95 E-value=2.5e-09 Score=86.14 Aligned_cols=69 Identities=32% Similarity=0.657 Sum_probs=63.4
Q ss_pred CCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 43 DGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 43 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
+.+.+..|.|+||+|++|+..+++.+.+++||..+.+++..+++.+.+++...+.+++.+.+++.||.+
T Consensus 2 ~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 2 NAMEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp CSEEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred CCcEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 346678899999999999999999999999999999999999999999877778899999999999975
No 34
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.95 E-value=7.8e-10 Score=89.91 Aligned_cols=66 Identities=23% Similarity=0.401 Sum_probs=60.8
Q ss_pred CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (845)
Q Consensus 44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (845)
.|.+..|.|+||+|++|+.+|++++++ +||..+.+|+.++++++.++ +.+++.+++++.||.+.+.
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~ 68 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLR 68 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEEC
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEec
Confidence 467788999999999999999999999 99999999999999999876 6889999999999998654
No 35
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.95 E-value=2.6e-09 Score=87.11 Aligned_cols=68 Identities=29% Similarity=0.552 Sum_probs=63.3
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+.+.
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 70 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 70 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEee
Confidence 35788999999999999999999999999999999999999999998888999999999999998653
No 36
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.95 E-value=1.8e-09 Score=88.66 Aligned_cols=69 Identities=38% Similarity=0.589 Sum_probs=64.1
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
.+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+...
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEE
T ss_pred EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEEC
Confidence 456799999999999999999999999999999999999999999988788899999999999998654
No 37
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.95 E-value=1.2e-09 Score=87.36 Aligned_cols=66 Identities=24% Similarity=0.376 Sum_probs=59.0
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA 115 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 115 (845)
|.+..|.| ||+|++|+.+|++++++++|| ++.+|+.++++++.+ ..+++++.+++++.||.+.+++
T Consensus 1 m~~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~---~~~~~~i~~~i~~~Gy~~~~~~ 66 (68)
T 3iwl_A 1 MPKHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIES---EHSMDTLLATLKKTGKTVSYLG 66 (68)
T ss_dssp -CEEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEE---SSCHHHHHHHHHTTCSCEEEEE
T ss_pred CceEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEe---cCCHHHHHHHHHHcCCceEecC
Confidence 35678999 999999999999999999999 999999999999986 3578999999999999986643
No 38
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.93 E-value=2.5e-09 Score=88.27 Aligned_cols=69 Identities=29% Similarity=0.540 Sum_probs=64.3
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
..+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 456689999999999999999999999999999999999999999999878899999999999998765
No 39
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.92 E-value=2.9e-09 Score=84.79 Aligned_cols=65 Identities=28% Similarity=0.624 Sum_probs=61.0
Q ss_pred ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+.|+||+|++|+..|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.+++.||++..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 57899999999999999999999999999999999999999998878899999999999998753
No 40
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.91 E-value=2.4e-09 Score=90.99 Aligned_cols=70 Identities=27% Similarity=0.509 Sum_probs=64.1
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhc---CCceeeecc
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDA---GFEASFVQS 198 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---G~~~~~~~~ 198 (845)
+..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.|++..++.++|.+.|+++ ||++.+..+
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~ 76 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE 76 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence 4578999999999999999999999999999999999999999999878889999999999 598876543
No 41
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.91 E-value=3.1e-09 Score=85.44 Aligned_cols=66 Identities=30% Similarity=0.545 Sum_probs=59.2
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+..|++.|.+++||.++.+|+.++++.|.|++. .+.++|.+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~~ 69 (71)
T 2xmw_A 4 TINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHARV 69 (71)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCcee
Confidence 45789999999999999999999999999999999999999999976 7889999999999998764
No 42
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.90 E-value=2.7e-09 Score=86.13 Aligned_cols=67 Identities=48% Similarity=0.814 Sum_probs=62.4
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 3578999999999999999999999999999999999999999998878899999999999998764
No 43
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.89 E-value=3.5e-09 Score=88.63 Aligned_cols=70 Identities=33% Similarity=0.627 Sum_probs=64.8
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 197 (845)
.+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++..++.++|.+.++++||.+.+..
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 4568999999999999999999999999999999999999999999987889999999999999987643
No 44
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.88 E-value=3.2e-09 Score=84.96 Aligned_cols=64 Identities=30% Similarity=0.598 Sum_probs=60.1
Q ss_pred ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.+.|++. .+.++|.+.++++||.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 578999999999999999999999999999999999999999987 6889999999999998764
No 45
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.88 E-value=4.9e-09 Score=82.88 Aligned_cols=63 Identities=29% Similarity=0.499 Sum_probs=58.8
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 193 (845)
..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++.. +.++|.+.++++||++
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 46889999999999999999999999999999999999999999874 8899999999999975
No 46
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.86 E-value=5.9e-09 Score=82.95 Aligned_cols=64 Identities=36% Similarity=0.624 Sum_probs=60.5
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 193 (845)
..+.|+||+|++|+..+++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4688999999999999999999999999999999999999999998888999999999999975
No 47
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.86 E-value=6.9e-09 Score=83.68 Aligned_cols=68 Identities=31% Similarity=0.576 Sum_probs=62.3
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
.+..|.|+||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 45679999999999999999999999999999999999999999987777889999999999997643
No 48
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.85 E-value=9.6e-09 Score=83.73 Aligned_cols=72 Identities=33% Similarity=0.596 Sum_probs=64.7
Q ss_pred CCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 42 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
...+.+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+.+
T Consensus 2 ~~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 2 LSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CCCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred CccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 345677789999999999999999999999999999999999999999987777889999999999997643
No 49
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.83 E-value=7.8e-09 Score=84.28 Aligned_cols=68 Identities=37% Similarity=0.556 Sum_probs=63.1
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+..+.|+||+|++|+..|++.|.+++||.++.+|+.++++.|.|++...+.++|.+.++++||.+..
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 45679999999999999999999999999999999999999999998888899999999999998754
No 50
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.83 E-value=7.2e-09 Score=85.45 Aligned_cols=70 Identities=33% Similarity=0.693 Sum_probs=63.7
Q ss_pred CceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 44 GMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 44 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+..+..|.|+||+|++|+..+++++.+++||.++.+|+.++++.+.+++...+.+++.+++++.||.+.+
T Consensus 6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (79)
T 1kvi_A 6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEE
T ss_pred CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEe
Confidence 3566789999999999999999999999999999999999999999987767889999999999998654
No 51
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.83 E-value=9.1e-09 Score=82.95 Aligned_cols=67 Identities=36% Similarity=0.662 Sum_probs=61.8
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
+..+.|+||+|++|+.+|++.+.+++||.++.+|+.++++.+.|+ ...+.++|.+.++++||.+.+.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEEc
Confidence 347889999999999999999999999999999999999999999 6678899999999999988753
No 52
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.83 E-value=5.1e-09 Score=85.22 Aligned_cols=67 Identities=42% Similarity=0.704 Sum_probs=62.2
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+..
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence 3578999999999999999999999999999999999999999998877888999999999998764
No 53
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.82 E-value=1.3e-08 Score=80.83 Aligned_cols=66 Identities=39% Similarity=0.655 Sum_probs=60.8
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
.+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 456799999999999999999999999999999999999999999877778889999999999975
No 54
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.82 E-value=1e-08 Score=83.06 Aligned_cols=65 Identities=31% Similarity=0.505 Sum_probs=59.9
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.|.|++. ..++|.+.++++||.+..
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD 68 (73)
T ss_dssp EEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence 45789999999999999999999999999999999999999999984 378899999999998764
No 55
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.82 E-value=1e-08 Score=86.97 Aligned_cols=70 Identities=27% Similarity=0.449 Sum_probs=63.1
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhc---Ccchhhhc
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDA---GFEAEILA 115 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---Gy~~~~~~ 115 (845)
++..|.|+||+|++|+..|++++.+++||.++.+|+.++++.+.+++...+.+++.++++++ ||.+.+..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~ 75 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITS 75 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCC
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeC
Confidence 45679999999999999999999999999999999999999999987777889999999999 59876543
No 56
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.82 E-value=6.4e-09 Score=83.41 Aligned_cols=66 Identities=39% Similarity=0.623 Sum_probs=61.4
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCcee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEAS 194 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 194 (845)
+..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.+++.+.++++||.+.
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 4 TQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 456899999999999999999999999999999999999999999877888999999999999864
No 57
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.81 E-value=1.5e-08 Score=82.59 Aligned_cols=67 Identities=33% Similarity=0.681 Sum_probs=61.7
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+.+++...+.+++.+.+++.||.+.+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 69 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVI 69 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEE
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence 4569999999999999999999999999999999999999999987777889999999999998754
No 58
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.81 E-value=8.8e-09 Score=86.18 Aligned_cols=70 Identities=34% Similarity=0.654 Sum_probs=63.7
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (845)
..+..|.|+||+|++|+..|++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.+.
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 77 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVK 77 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECS
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEec
Confidence 3567799999999999999999999999999999999999999999877778899999999999987553
No 59
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.79 E-value=4.9e-09 Score=86.01 Aligned_cols=69 Identities=33% Similarity=0.586 Sum_probs=63.4
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
|.+..|.|+||+|++|+..|++++.+++||..+.+++.++++.+.+++...+.+++.+++++.||.+.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 70 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATV 70 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEE
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEE
Confidence 567789999999999999999999999999999999999999999987767888999999999998754
No 60
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.79 E-value=1.1e-08 Score=82.51 Aligned_cols=67 Identities=36% Similarity=0.682 Sum_probs=61.2
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+..|.|+||+|++|+..+++++.+++||.++.+|+..+++.+.+++.....+++.+.+++.||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 4579999999999999999999999999999999999999999987667888999999999997643
No 61
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.79 E-value=1.6e-08 Score=81.99 Aligned_cols=67 Identities=33% Similarity=0.481 Sum_probs=60.4
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
|++..|.|+||+|++|+..|++.+.+++||..+.+|+.++++.+.+++. ..+++.+.+++.||.+..
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~ 68 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRD 68 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCcccc
Confidence 5677899999999999999999999999999999999999999999763 477899999999998753
No 62
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.79 E-value=1.2e-08 Score=84.28 Aligned_cols=68 Identities=35% Similarity=0.614 Sum_probs=63.1
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
+..+.|+||+|++|+.++++.|.+++||.++.+|+.++++.+.|++...+.++|.+.++++||.+...
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (80)
T 1jww_A 4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLK 71 (80)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEec
Confidence 45789999999999999999999999999999999999999999988788999999999999988653
No 63
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.78 E-value=1.6e-08 Score=81.23 Aligned_cols=66 Identities=30% Similarity=0.575 Sum_probs=58.4
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (845)
.+..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+.+++. .+.+++.+.+++.||.+.
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHAR 68 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCce
Confidence 346799999999999999999999999999999999999999999765 778899999999999764
No 64
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.77 E-value=1.7e-08 Score=80.26 Aligned_cols=64 Identities=38% Similarity=0.610 Sum_probs=59.5
Q ss_pred EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (845)
Q Consensus 49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (845)
.|.++||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.++
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4889999999999999999999999999999999999999998777788999999999999764
No 65
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.76 E-value=1.7e-08 Score=80.89 Aligned_cols=66 Identities=41% Similarity=0.666 Sum_probs=60.8
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
++..|.|+||+|++|+..+++.+.+++||..+.+|+.++++.+.+++...+.+++.+.+++.||.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 456799999999999999999999999999999999999999999876677889999999999975
No 66
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.75 E-value=3.2e-08 Score=84.95 Aligned_cols=74 Identities=26% Similarity=0.336 Sum_probs=65.9
Q ss_pred cCCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhh
Q 003131 41 IGDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEIL 114 (845)
Q Consensus 41 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 114 (845)
....|.+..|.|+||+|++|+..|++.+.+++||..+.+++..+.+.+.+++...+.+.+.++++++||.+.+.
T Consensus 11 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 84 (95)
T 2kkh_A 11 KVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVR 84 (95)
T ss_dssp CSSCSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred cccceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEe
Confidence 34456778899999999999999999999999999999999999999999876677889999999999987554
No 67
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.75 E-value=1.4e-08 Score=80.46 Aligned_cols=62 Identities=29% Similarity=0.588 Sum_probs=56.8
Q ss_pred ccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 131 QYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 131 ~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.| + ...+.++|.+.++++||.+..
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcEe
Confidence 5789999999999999999999999999999999999999 3 457889999999999998754
No 68
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.74 E-value=2.2e-08 Score=78.99 Aligned_cols=64 Identities=28% Similarity=0.444 Sum_probs=58.2
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
+..|.|+||+|++|+..+++++.+++||..+.+|+.++++.+.+++.. +.+++.+.+++.||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 346899999999999999999999999999999999999999987653 7889999999999964
No 69
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.74 E-value=3.4e-08 Score=84.74 Aligned_cols=70 Identities=30% Similarity=0.377 Sum_probs=64.6
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
..+..+.|+||+|++|+..|++.|.+++||..+.+++..+++.|.|++..++.+.|.+.++++||.+...
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 84 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVR 84 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEES
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEe
Confidence 4567899999999999999999999999999999999999999999988778899999999999988654
No 70
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.73 E-value=3.1e-08 Score=80.31 Aligned_cols=64 Identities=27% Similarity=0.379 Sum_probs=58.6
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCC-CeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLP-GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~-GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+..+.|+ |+|++|+.+|+++|.+++ ||.++.+|+.++++.|.++ .+.++|.+.|+++||++..
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEE
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCcee
Confidence 34578999 999999999999999999 9999999999999999973 5789999999999999865
No 71
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.73 E-value=2.2e-08 Score=80.67 Aligned_cols=66 Identities=42% Similarity=0.813 Sum_probs=60.7
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+..|.++||+|++|+..+++.+.+++||.++.+|+.++++.+.++ ...+.+++.+.+++.||.+.+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~ 68 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEI 68 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEE
Confidence 467999999999999999999999999999999999999999998 667889999999999998754
No 72
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.71 E-value=2.5e-08 Score=79.60 Aligned_cols=64 Identities=28% Similarity=0.552 Sum_probs=58.7
Q ss_pred EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
.|.|+||+|++|+..+++++.+++||.++.+|+..+++.+.+++. ...+++.+.++++||.+.+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 388999999999999999999999999999999999999998765 6788999999999998643
No 73
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.71 E-value=4.3e-08 Score=79.45 Aligned_cols=65 Identities=29% Similarity=0.437 Sum_probs=59.0
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCC-CceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLK-GVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~-gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+.+..|.|+ |+|++|+.+|++++.+++ ||.++.+|+.++++.+.+ ..+.+++.+++++.||.+..
T Consensus 4 m~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~Gy~~~~ 69 (73)
T 1cc8_A 4 IKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYT---TLPYDFILEKIKKTGKEVRS 69 (73)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTSSCEEE
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEE---eCCHHHHHHHHHHhCCCcee
Confidence 456789999 999999999999999999 999999999999999986 35788999999999998754
No 74
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.70 E-value=2.6e-08 Score=82.17 Aligned_cols=69 Identities=30% Similarity=0.619 Sum_probs=62.8
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
|.+..|.|+||+|++|+..+++.+.+++||..+.+|+..+++.+.+++...+.+++.+.+++.||.+..
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKL 70 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEE
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEe
Confidence 356679999999999999999999999999999999999999999987777888999999999998754
No 75
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.68 E-value=2.6e-08 Score=80.93 Aligned_cols=66 Identities=39% Similarity=0.718 Sum_probs=60.0
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (845)
+..|.|+||+|++|+..+++.+.+++||.++.+|+..+++.+.+++...+.+++.+.+++.||.+.
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 70 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPS 70 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence 356899999999999999999999999999999999999999998766677889999999999764
No 76
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.68 E-value=1.3e-08 Score=80.93 Aligned_cols=61 Identities=20% Similarity=0.313 Sum_probs=56.3
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
..+.|+||+|++|+.+|+++|.++ ||.++.+|+.++++.+.+++. ++|.+.++++||++..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceee
Confidence 368899999999999999999999 999999999999999999874 7899999999998764
No 77
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.66 E-value=2.3e-08 Score=83.64 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=58.2
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 193 (845)
..+..+.|+||+|++|+.+|+++|.+++||.++.+|+.++++.|.++ .+.++|.+.|+++||++
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 34567999999999999999999999999999999999999999974 57899999999999975
No 78
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.64 E-value=3.7e-08 Score=77.12 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=55.8
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCce
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEA 193 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 193 (845)
..+.|+||+|++|+.+|++.|.+++||.++.+|+.++++.+.+ ..+.++|.+.++++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 3688999999999999999999999999999999999999984 357889999999999975
No 79
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=1.5e-07 Score=81.02 Aligned_cols=68 Identities=24% Similarity=0.441 Sum_probs=61.1
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeecc
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQS 198 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 198 (845)
..+..|.|+ |+|++|+.+|+++|.+++||.++.+|+.++++.|.|+ .+.++|.+.|+++||++.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence 345689999 9999999999999999999999999999999999984 5789999999999999877543
No 80
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.61 E-value=4.9e-08 Score=77.20 Aligned_cols=61 Identities=34% Similarity=0.574 Sum_probs=55.6
Q ss_pred EEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchh
Q 003131 49 QVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAE 112 (845)
Q Consensus 49 ~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 112 (845)
.|.|+||+|++|+..+++++.+++||.++.+|+.++++.+ + ...+.+++.+++++.||.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcE
Confidence 4889999999999999999999999999999999999998 3 45788999999999999864
No 81
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.60 E-value=4.9e-08 Score=81.65 Aligned_cols=64 Identities=20% Similarity=0.233 Sum_probs=57.5
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
+.+..|.|+||+|++|+..|++++.+++||.++.+|+.++++.+.++ .+.+++.++++++||.+
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 45567999999999999999999999999999999999999999852 57889999999999975
No 82
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.60 E-value=5.8e-08 Score=75.99 Aligned_cols=61 Identities=30% Similarity=0.517 Sum_probs=55.4
Q ss_pred EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcch
Q 003131 48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEA 111 (845)
Q Consensus 48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~ 111 (845)
..|.|+||+|++|+..+++.+.+++||.++.+|+.++++.+.. ..+.+++.+++++.||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999999999873 356889999999999975
No 83
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=1.9e-07 Score=80.38 Aligned_cols=68 Identities=24% Similarity=0.431 Sum_probs=61.0
Q ss_pred ceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcc
Q 003131 45 MRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAE 116 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 116 (845)
+.+..|.|+ |+|++|+++|+++|.+++||.++.+|+.++++++.++ .+.+++.+++++.||.+.+...
T Consensus 18 ~~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~ 85 (98)
T 2crl_A 18 LCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGM 85 (98)
T ss_dssp CEEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEES
T ss_pred ceEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccC
Confidence 456789999 9999999999999999999999999999999999873 5688999999999999876544
No 84
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.58 E-value=4.4e-08 Score=77.80 Aligned_cols=61 Identities=21% Similarity=0.351 Sum_probs=55.1
Q ss_pred EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
..|.|+||+|++|+..+++++.++ ||..+.+|+.++++.+.+++. +++.+++++.||.+.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceee
Confidence 569999999999999999999999 999999999999999987643 7899999999998643
No 85
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.44 E-value=2.2e-08 Score=105.93 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=41.4
Q ss_pred eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 802 ~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+++||+++++++.|+++|++++|+|||+..++.++|+++|+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~ 181 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY 181 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999999999999999985
No 86
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.31 E-value=5e-07 Score=72.47 Aligned_cols=60 Identities=23% Similarity=0.445 Sum_probs=53.1
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+.+|++.|.+++||.++.+|+..+++.|.+++. .+.|+++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-------~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS-------IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC-------HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc-------HHHHHHhCCCccc
Confidence 34688999999999999999999999999999999999999998862 3577899998654
No 87
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.29 E-value=1e-06 Score=70.59 Aligned_cols=60 Identities=23% Similarity=0.404 Sum_probs=52.4
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
+..|.|+||+|++|+..|++++.+++||.++.+|+..+++.+.++. . .+.++++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA---S----IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC---C----HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC---c----HHHHHHhCCCccc
Confidence 4679999999999999999999999999999999999999998754 2 4567889997654
No 88
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.17 E-value=1.9e-06 Score=101.93 Aligned_cols=67 Identities=34% Similarity=0.520 Sum_probs=63.2
Q ss_pred eeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 129 VGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 129 ~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
+..+.|+||+|++|+++||+.+++++||.++++|+.++++.|+||+...+.+++.+.++++||++..
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~ 69 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD 69 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence 3478999999999999999999999999999999999999999999989999999999999999754
No 89
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.16 E-value=4.7e-06 Score=82.78 Aligned_cols=68 Identities=24% Similarity=0.500 Sum_probs=60.5
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccC
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS 199 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 199 (845)
.+..+.|+ |+|++|+.+||++|++++||.++++|+.++++.|.++ .++++|.+.|+++||++.+....
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEECCS
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccccCC
Confidence 34578999 9999999999999999999999999999999999963 57899999999999998775543
No 90
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.04 E-value=1e-05 Score=80.37 Aligned_cols=66 Identities=21% Similarity=0.351 Sum_probs=59.0
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhc
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILA 115 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 115 (845)
.+..|.|+ |+|++|+++||+++++++||.++.+|+.++++++.. ..+.+++.++++++||.+.+..
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aI~~~Gy~a~~~~ 71 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRG 71 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHHTTCCCEEEC
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEec---cCCHHHHHHHHHHcCCcccccc
Confidence 45679999 999999999999999999999999999999999985 3578899999999999876543
No 91
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.01 E-value=9.6e-06 Score=81.83 Aligned_cols=68 Identities=24% Similarity=0.493 Sum_probs=60.4
Q ss_pred eeeccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccC
Q 003131 128 IVGQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSS 199 (845)
Q Consensus 128 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 199 (845)
.+..+.|+ |+|++|+.+||++|++++||.++++|+.++++.|.. ..++++|.+.|+++||++.+....
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~ 74 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAG 74 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEES
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCC
Confidence 34578999 999999999999999999999999999999999984 357899999999999998775443
No 92
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.92 E-value=1.7e-05 Score=79.97 Aligned_cols=88 Identities=17% Similarity=0.227 Sum_probs=68.5
Q ss_pred eEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhhhcccCCCCCCCC
Q 003131 46 RRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEILAESSTSGPKPQ 125 (845)
Q Consensus 46 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~~~~~~ 125 (845)
.+..|.|+ |+|++|+.+||+++++++||.++.+|+.++++.+.. ..+++++.++++++||.+.+...... +
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~~~-----~ 77 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAGKP-----N 77 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEESST-----T
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCCcc-----c
Confidence 55679999 999999999999999999999999999999999974 35788999999999999866543221 1
Q ss_pred ceeeeccccCCccchhh
Q 003131 126 GTIVGQYTIGGMTCAAC 142 (845)
Q Consensus 126 ~~~~~~~~v~gm~C~~C 142 (845)
......+.-....|..|
T Consensus 78 ~~Av~~l~~~~~~~~~~ 94 (249)
T 1jk9_B 78 SSAVAILETFQKYTIDQ 94 (249)
T ss_dssp SEEEEEEEESSCCTTSC
T ss_pred ceeEEEecccccccccc
Confidence 12333344445567666
No 93
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=97.29 E-value=0.00086 Score=63.57 Aligned_cols=127 Identities=13% Similarity=0.017 Sum_probs=75.6
Q ss_pred EEEEEEeccCCChhhHHHHHhhhh---ccCCChhHHHHHHHHhhcCcCCCCCCCCCCCCCccccCCCccccccccccccC
Q 003131 664 TVTTAKVFTKMDRGEFLTLVASAE---ASSEHPLAKAVVEYARHFHFFDDPSLNPDGQSHSKESTGSGWLLDVSDFSALP 740 (845)
Q Consensus 664 ~v~~~~~~~~~~~~~~~~~~~~~~---~~s~~p~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (845)
.+.......+.+.++++.+++... ....+|++.||++++...+.. ............+|++..
T Consensus 3 ~l~~~~d~~G~~~~~vl~~a~L~s~~~~~~~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~r 68 (170)
T 3gwi_A 3 VLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFER 68 (170)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHCCSCCCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCccc
Confidence 344555566777788888876655 346899999999876432100 000011123344555555
Q ss_pred CCceEEEE--cCe--EEEEeehhhhhhcCC---------CCC----hhhHHHHHHHHHccCeEEEEEE------------
Q 003131 741 GRGIQCFI--SGK--QVLVGNRKLLNESGI---------TIP----DHVESFVVELEESARTGILVAY------------ 791 (845)
Q Consensus 741 g~gi~~~~--~g~--~~~~g~~~~~~~~~~---------~~~----~~~~~~~~~~~~~g~~~l~va~------------ 791 (845)
++.....- +|. .+..|+++.+...+. ++. ..+.+..++++.+|+|+++||+
T Consensus 69 Krmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~ 148 (170)
T 3gwi_A 69 RRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQR 148 (170)
T ss_dssp CEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCG
T ss_pred CcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCc
Confidence 43322222 132 355677765543221 112 2456677889999999999997
Q ss_pred ----CCeEEEEEEeeCC
Q 003131 792 ----DDNLIGVMGIADP 804 (845)
Q Consensus 792 ----~~~~lG~~~~~D~ 804 (845)
|++|+|+++|-|.
T Consensus 149 ~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 149 ADESDLILEGYIAFLDH 165 (170)
T ss_dssp GGSCSEEEEEEEEEEC-
T ss_pred cccCCcEEEehhccccc
Confidence 5689999999885
No 94
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=94.06 E-value=0.009 Score=58.06 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=50.2
Q ss_pred ccCeEEEEEECCeEEEEEEeeCCCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 782 SARTGILVAYDDNLIGVMGIADPVKREAAVV-------VEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 782 ~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~-------I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+.+.+..|+++..--...++.++++++. |+.|+++|+++.|+||++...+..+++++||.
T Consensus 23 ~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~ 92 (195)
T 3n07_A 23 KQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS 92 (195)
T ss_dssp HTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC
T ss_pred hCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc
Confidence 3577888888988765222333344555555 99999999999999999999999999999986
No 95
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=93.87 E-value=0.028 Score=55.98 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=49.0
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.|++++.- ...+.+++.++|++|++.|++++++||++...+..+++++|+.
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~ 62 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGIN 62 (227)
T ss_dssp CEEEEEHHHHSBCT---TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCC
T ss_pred EEEEEECCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCC
Confidence 45666677777652 5568899999999999999999999999999999999999875
No 96
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=93.02 E-value=0.085 Score=50.25 Aligned_cols=61 Identities=7% Similarity=0.099 Sum_probs=47.5
Q ss_pred CeEEEEEECCeEEE-EEEeeC------CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIG-VMGIAD------PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG-~~~~~D------~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+.+-.|++++- -..+.. .+.++..++|+.|++.|+++.++||++...+..+++++|+.
T Consensus 8 ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~ 75 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 75 (180)
T ss_dssp CCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC
T ss_pred CeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc
Confidence 45667777776542 112211 35678889999999999999999999999999999999985
No 97
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=91.99 E-value=0.11 Score=55.98 Aligned_cols=51 Identities=12% Similarity=0.003 Sum_probs=44.1
Q ss_pred CeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 793 DNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 793 ~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
+.+.+...-...++|++++.|+.||+.|++|+|+||.....++.+|+++|+
T Consensus 210 g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 210 GRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 344445555566899999999999999999999999999999999999975
No 98
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=91.67 E-value=0.13 Score=49.51 Aligned_cols=45 Identities=16% Similarity=0.211 Sum_probs=37.7
Q ss_pred eEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 794 NLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 794 ~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
..++.+.+.|.+ +|+.|++.|+++.|+||++...+..+++++||.
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~ 86 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE 86 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH
Confidence 445555544433 999999999999999999999999999999986
No 99
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=90.72 E-value=0.046 Score=52.74 Aligned_cols=63 Identities=11% Similarity=0.093 Sum_probs=49.3
Q ss_pred ccCeEEEEEECCeEEEEEEeeCCCChhHHHH-------HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 782 SARTGILVAYDDNLIGVMGIADPVKREAAVV-------VEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 782 ~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~-------I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+.+.+-.|+++..--...++..+++++. |+.|++.|+++.++||++...+..+++++|+.
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~ 86 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT 86 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc
Confidence 3577888888887755222333334555555 99999999999999999999999999999986
No 100
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=90.38 E-value=0.2 Score=49.08 Aligned_cols=44 Identities=11% Similarity=0.189 Sum_probs=37.2
Q ss_pred EEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 795 LIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 795 ~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+..+.+.|.+ +|+.|+++|+++.++||++...+..+++++||.
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~ 116 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT 116 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 44555544433 999999999999999999999999999999986
No 101
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=89.55 E-value=0.36 Score=47.56 Aligned_cols=41 Identities=29% Similarity=0.256 Sum_probs=39.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.++|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999985
No 102
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=88.80 E-value=0.25 Score=46.69 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=31.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 812 ~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+|+.|+++|+++.++||++...+..+++++||.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~ 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe
Confidence 899999999999999999999999999999984
No 103
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=88.27 E-value=0.36 Score=47.36 Aligned_cols=42 Identities=14% Similarity=0.166 Sum_probs=39.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 126 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIP 126 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999999999985
No 104
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=88.11 E-value=0.53 Score=44.78 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=37.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDN-WRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~-~~tA~~iA~~~GI~ 844 (845)
++.|++.++|+.|++.|+++.++||-. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 68889999998875
No 105
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=87.54 E-value=0.5 Score=43.68 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=46.9
Q ss_pred CeEEEEEECCeEEE-EEEe------eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIG-VMGI------ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG-~~~~------~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+.+-.|++++- -..+ ...+.+++.++++.|++.|+++.++||.+...+..+.+++|+.
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 76 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE 76 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH
Confidence 45666666666541 1111 2234678899999999999999999999999999999999985
No 106
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=87.15 E-value=0.43 Score=50.41 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=39.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++|++.+.++.|++.|+++.|+||+....+..+++++|+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~ 218 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLD 218 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCC
Confidence 78999999999999999999999999999999999999985
No 107
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=86.65 E-value=0.11 Score=46.42 Aligned_cols=56 Identities=25% Similarity=0.264 Sum_probs=42.4
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+.+-.|+++ .-..++.|++.+++++|++.|+++.++|+.+...+..+.+.+|+.
T Consensus 3 k~i~~D~DgtL----~~~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 3 RGLIVDYAGVL----DGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp CEEEECSTTTT----SSCHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred cEEEEecccee----cCCCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 44555566665 112346788999999999999999999999888877777777653
No 108
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=85.89 E-value=0.13 Score=48.26 Aligned_cols=44 Identities=14% Similarity=0.180 Sum_probs=36.1
Q ss_pred CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCC
Q 003131 792 DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAR--EVCV 843 (845)
Q Consensus 792 ~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~--~~GI 843 (845)
+++.++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ ++||
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi 75 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDC 75 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCC
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCc
Confidence 4456777777776 3899999999999999999 67788888 6676
No 109
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=85.50 E-value=0.5 Score=49.47 Aligned_cols=41 Identities=5% Similarity=0.046 Sum_probs=39.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++|++.++++.|++.|+++.++||.....+..+.+++|+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~ 219 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLD 219 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999999999985
No 110
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=85.13 E-value=1.4 Score=41.83 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=47.2
Q ss_pred ccCeEEEEEECCeEE-EEEEeeCCC------ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 782 SARTGILVAYDDNLI-GVMGIADPV------KREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 782 ~g~~~l~va~~~~~l-G~~~~~D~l------r~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+.+.+-.|+++. +-..+.... ......+|+.|++.|+++.++||++...+..+++++|+.
T Consensus 24 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~ 93 (188)
T 2r8e_A 24 ENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT 93 (188)
T ss_dssp HTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC
T ss_pred hcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc
Confidence 467788888888765 333232211 122235899999999999999999999999999999985
No 111
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=84.63 E-value=1.6 Score=40.27 Aligned_cols=48 Identities=27% Similarity=0.403 Sum_probs=42.0
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCCC---------------eEEEEeCCCCCCHHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALATS---------------LGEVEYDPTVISKDDIANAIE 187 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~ 187 (845)
++|-|-+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..=
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 468888999999999999999887754 789999999999999988663
No 112
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=83.52 E-value=0.89 Score=42.01 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=31.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 812 VVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 812 ~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++.|++.|+++.++||++...+..+++++|+.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~ 71 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD 71 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence 899999999999999999999999999999985
No 113
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=82.52 E-value=1.2 Score=42.33 Aligned_cols=41 Identities=12% Similarity=0.279 Sum_probs=33.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNW---RTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~---~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++.|+++.++|+-.. ..+..+-+.+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 5788999999999999999999997665 7788888888874
No 114
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=82.18 E-value=1.1 Score=44.12 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=47.7
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.|++++.- ...+.+.+.+++++|++.|+++++.||-....+..+.+++|+.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~ 60 (231)
T 1wr8_A 4 KAISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTS 60 (231)
T ss_dssp CEEEEESTTTTBCT---TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCC
T ss_pred eEEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCC
Confidence 45666677777642 4457899999999999999999999999999999999998874
No 115
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=82.02 E-value=1.2 Score=44.29 Aligned_cols=42 Identities=12% Similarity=0.094 Sum_probs=38.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 357799999999999999999999999999999999999874
No 116
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=81.37 E-value=1 Score=49.05 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=39.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~ 296 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLD 296 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCcc
Confidence 79999999999999999999999999999999999999985
No 117
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=81.28 E-value=1.8 Score=43.67 Aligned_cols=57 Identities=16% Similarity=0.173 Sum_probs=45.5
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG---DNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG---D~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.||+++- .+.+-++++++|++|++.|++++++|| -.........+++|+.
T Consensus 8 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 8 KKGYIIDIDGVIGK----SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp CSEEEEECBTTTEE----TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEC----CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 56778888888764 455668999999999999999999999 5666666666777764
No 118
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=80.63 E-value=2.2 Score=40.48 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=41.2
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCCCe-------------------EEEEeCCCCCCHHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALATSL-------------------GEVEYDPTVISKDDIANAIE 187 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~~-------------------~~v~~~~~~~~~~~i~~~i~ 187 (845)
+.|-|-+|..+.+++||.++.+-++.+. +.|.|||..++.++|++..=
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4588889999999999999998877653 89999999999999988653
No 119
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=79.58 E-value=2.3 Score=38.38 Aligned_cols=40 Identities=13% Similarity=-0.076 Sum_probs=33.6
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDN---WRTAHAVAREVCVI 844 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~---~~tA~~iA~~~GI~ 844 (845)
+-+++.++|++|++.|+++++.||=+ ...+....++.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 35799999999999999999999977 55677777787774
No 120
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=79.29 E-value=1.7 Score=42.38 Aligned_cols=42 Identities=12% Similarity=0.079 Sum_probs=38.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 356899999999999999999999999999999999998874
No 121
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=78.98 E-value=1.6 Score=44.37 Aligned_cols=59 Identities=10% Similarity=0.047 Sum_probs=49.1
Q ss_pred cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
..+.+++-.|++++.- .+.+-+.+.++|++|++.|+++++.||=....+..+.+++|+.
T Consensus 8 ~~~li~~DlDGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CCEEEEEECTTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CceEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3567788889988641 2345577899999999999999999999999999999999874
No 122
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=78.96 E-value=1 Score=43.49 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=39.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 115 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLD 115 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcc
Confidence 468999999999999999999999999999999999999875
No 123
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=78.86 E-value=2.2 Score=41.32 Aligned_cols=40 Identities=20% Similarity=0.069 Sum_probs=35.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDN---------------WRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~---------------~~tA~~iA~~~GI 843 (845)
++.|++.+++++|++.|+++.++|+.. ...+..+.+++|+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 104 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDV 104 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCC
Confidence 678999999999999999999999999 4667777788776
No 124
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=78.49 E-value=2.8 Score=39.73 Aligned_cols=47 Identities=23% Similarity=0.441 Sum_probs=40.5
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCC---------------CeEEEEeCCCCCCHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALAT---------------SLGEVEYDPTVISKDDIANAI 186 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i 186 (845)
+.|-|-+|..+.+++||.++.+-++. +.+.|.|||..++.++|++..
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~F 93 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFF 93 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHH
Confidence 45888899999999999998887665 468899999999999998865
No 125
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=77.90 E-value=2.6 Score=39.75 Aligned_cols=47 Identities=30% Similarity=0.437 Sum_probs=40.4
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCCC-------------------eEEEEeCCCCCCHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALATS-------------------LGEVEYDPTVISKDDIANAI 186 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 186 (845)
+.|-|-+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 468888999999999999998877655 38899999999999998865
No 126
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=77.90 E-value=2.8 Score=41.04 Aligned_cols=47 Identities=30% Similarity=0.521 Sum_probs=40.8
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCCC-------------------eEEEEeCCCCCCHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALATS-------------------LGEVEYDPTVISKDDIANAI 186 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-------------------~~~v~~~~~~~~~~~i~~~i 186 (845)
++|-|-+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~F 166 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVL 166 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHH
Confidence 458888999999999999999887665 38999999999999998865
No 127
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=77.53 E-value=1.8 Score=41.61 Aligned_cols=40 Identities=13% Similarity=0.127 Sum_probs=38.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 122 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIP 122 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCC
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCC
Confidence 7899999999999999999999999999999999999884
No 128
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=77.35 E-value=2.8 Score=40.14 Aligned_cols=48 Identities=25% Similarity=0.376 Sum_probs=40.9
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCC-------------------CeEEEEeCCCCCCHHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALAT-------------------SLGEVEYDPTVISKDDIANAIE 187 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~-------------------~~~~v~~~~~~~~~~~i~~~i~ 187 (845)
+.|-|-+|..+.+++||.++.+-++. +.+.|.|||..++.++|++..=
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~ 115 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFW 115 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 35888899999999999999988774 3589999999999999988653
No 129
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=76.95 E-value=2.6 Score=39.29 Aligned_cols=39 Identities=10% Similarity=0.040 Sum_probs=33.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNW---------------RTAHAVAREVC 842 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~---------------~tA~~iA~~~G 842 (845)
++.|++.+++++|++.|+++.++|+... ..+..+.+++|
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 80 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG 80 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999886 55666667777
No 130
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=76.75 E-value=1e+02 Score=37.65 Aligned_cols=144 Identities=15% Similarity=0.165 Sum_probs=83.8
Q ss_pred CceEEEEEeCCCCchh----hHHHHHHhhhCCCCceEEEEEee---ccEEEEEECCCCCCH----HHHHHHHHhc--Ccc
Q 003131 44 GMRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVALL---QNKADVVFDPDLVKD----EDIKNAIEDA--GFE 110 (845)
Q Consensus 44 ~~~~~~~~v~gm~C~~----C~~~ie~~l~~~~gv~~~~v~~~---~~~~~v~~~~~~~~~----~~i~~~i~~~--Gy~ 110 (845)
..-.+...-+|.+-.. -...+|+.+++.|||.++..... .....+.+++.. +. .++.+.+.+. .+.
T Consensus 41 ~~v~v~~~~pg~s~~~~~~~v~~~iE~~l~~~~~v~~v~s~sg~~~~~~i~v~~~~~~-~~~~~~~~v~~~l~~~~~~lP 119 (1052)
T 2v50_A 41 PAIAVQVSYPGASAETVQDTVVQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGT-DPDIAQVQVQNKLQLATPLLP 119 (1052)
T ss_dssp CEEEEEEECTTCCHHHHHHHTHHHHHTTCCSCTTEEEEECCEETTSEEEEEEEECSSC-CHHHHHHHHHHHHHHHGGGSC
T ss_pred ceEEEEEEeCCCCHHHHHHHHHHHHHHHHcCCCCceEEEEEecCCCeEEEEEEEECCC-CHHHHHHHHHHHHHHHHhhCC
Confidence 3344556667766543 35678888999999998875431 234456665432 22 3555555543 122
Q ss_pred hhhhcccCCCCCCCCceeeeccccCCcc-------chh-hHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCC-----CC
Q 003131 111 AEILAESSTSGPKPQGTIVGQYTIGGMT-------CAA-CVNSVEGILRGLPGVKRAVVALATSLGEVEYDPT-----VI 177 (845)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~v~gm~-------C~~-C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~-----~~ 177 (845)
... ...............+.+.+.|-+ -.. -.+.+++.|++++||.++.++-....+.|..|++ .+
T Consensus 120 ~~~-~~p~i~~~~~~~~~~~~~~l~g~~~~~~~~~L~~~a~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gl 198 (1052)
T 2v50_A 120 QEV-QRQGIRVTKAVKNFLMVVGVVSTDGSMTKEDLSNYIVSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQL 198 (1052)
T ss_dssp HHH-HTTCCEEECEEEEEEEEEEEEESSTTSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTC
T ss_pred CCC-CCCeeEecCCCCcceEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCC
Confidence 111 000000000011123445554432 112 2357899999999999999875566788888874 37
Q ss_pred CHHHHHHHHHhc
Q 003131 178 SKDDIANAIEDA 189 (845)
Q Consensus 178 ~~~~i~~~i~~~ 189 (845)
+..++.+.|+..
T Consensus 199 s~~~v~~~l~~~ 210 (1052)
T 2v50_A 199 TPGDVSSAIQAQ 210 (1052)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHhc
Confidence 889999999865
No 131
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=76.57 E-value=2 Score=40.29 Aligned_cols=41 Identities=17% Similarity=0.109 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGD---------------NWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD---------------~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++.|+++.++|+- ....+..+.+.+|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 456777788887763
No 132
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=76.25 E-value=5.9 Score=41.29 Aligned_cols=72 Identities=14% Similarity=0.113 Sum_probs=51.7
Q ss_pred hhhHHHHHHHHHccCe-EEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003131 770 DHVESFVVELEESART-GILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREV 841 (845)
Q Consensus 770 ~~~~~~~~~~~~~g~~-~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~ 841 (845)
+++++..+++.+.+.. .....+.......-.....+.+++.+.++.|+++|++|+++||=....++.+|..+
T Consensus 108 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 108 RELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp HHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3455555555444332 22233344444444556678999999999999999999999999999999999884
No 133
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=76.21 E-value=2.9 Score=39.85 Aligned_cols=42 Identities=12% Similarity=-0.010 Sum_probs=38.6
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~ 124 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChH
Confidence 357899999999999999999999999999999999998874
No 134
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=75.90 E-value=2.3 Score=40.73 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=37.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~ 108 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFP 108 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCc
Confidence 5799999999999999 999999999999999999999985
No 135
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=75.81 E-value=1.5 Score=43.29 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=35.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
-+++|++.++++.|+++|+++.++|+.....+..+.+ |+
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l 114 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GI 114 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TT
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cC
Confidence 4789999999999999999999999999988888877 65
No 136
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=75.72 E-value=2.1 Score=43.65 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=51.0
Q ss_pred HHccCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 780 EESARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 780 ~~~g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.....+.+++-.|++++- =...+-+.+.++|++|++.|+++++.||-....+..+.+++|+.
T Consensus 17 ~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 17 FQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp ----CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred ccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 344567888889999864 24568889999999999999999999999999999999999874
No 137
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=75.44 E-value=1.9 Score=44.09 Aligned_cols=57 Identities=18% Similarity=0.228 Sum_probs=47.9
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.|++++. -...+-+++.++|++|++.|+++++.||=....+..+.+++|+.
T Consensus 6 kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 6 KLIAIDMDGTLLL---PDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp CEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred eEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4566777888764 13457789999999999999999999999999999999999874
No 138
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=75.03 E-value=2.7 Score=40.14 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=37.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 110 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLA 110 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCch
Confidence 56789999999999999999999999999999999998874
No 139
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=73.66 E-value=0.79 Score=43.55 Aligned_cols=40 Identities=25% Similarity=0.278 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~ 118 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDE 118 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSE
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCch
Confidence 8999999999999999999999999998888888 777763
No 140
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=72.85 E-value=2.3 Score=40.55 Aligned_cols=41 Identities=12% Similarity=0.091 Sum_probs=36.8
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.++++++++.|++.|+++.++||.....+..+.+++|+.
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~ 116 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD 116 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Confidence 56789999999999999999999999998888888888764
No 141
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=72.82 E-value=3.7 Score=40.28 Aligned_cols=41 Identities=17% Similarity=0.108 Sum_probs=37.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999999999999988874
No 142
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=72.49 E-value=3.3 Score=39.39 Aligned_cols=41 Identities=7% Similarity=-0.002 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 129 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQ 129 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcH
Confidence 57899999999999999999999999999999999998874
No 143
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=72.18 E-value=2.5 Score=45.06 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=54.4
Q ss_pred hHHHHHHHHHccCeEEEEEECCeEEEEE---------EeeCCCC-----hhHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003131 772 VESFVVELEESARTGILVAYDDNLIGVM---------GIADPVK-----REAAVVVEGLLKMGVRPVMVTGDNWRTAHAV 837 (845)
Q Consensus 772 ~~~~~~~~~~~g~~~l~va~~~~~lG~~---------~~~D~lr-----~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~i 837 (845)
+...+..+..++.+++.+-.|+++.+-. .+.|... +++++.++.|+++|+++.++|+-+...+..+
T Consensus 210 ~~~~~~~l~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~ 289 (387)
T 3nvb_A 210 TIDIIAAIQGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEP 289 (387)
T ss_dssp HHHHHHHHTTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 3445667778888999888887764421 2334333 7899999999999999999999999999999
Q ss_pred HHH
Q 003131 838 ARE 840 (845)
Q Consensus 838 A~~ 840 (845)
.++
T Consensus 290 l~~ 292 (387)
T 3nvb_A 290 FER 292 (387)
T ss_dssp HHH
T ss_pred Hhh
Confidence 987
No 144
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=71.74 E-value=2.9 Score=40.84 Aligned_cols=42 Identities=19% Similarity=0.095 Sum_probs=38.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
..+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 144 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLD 144 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCch
Confidence 357899999999999999999999999999999999988864
No 145
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=70.94 E-value=4 Score=39.56 Aligned_cols=41 Identities=17% Similarity=0.047 Sum_probs=37.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 45799999999999999999999999999999999988875
No 146
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=70.39 E-value=3.7 Score=39.89 Aligned_cols=41 Identities=12% Similarity=0.138 Sum_probs=37.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 47799999999999999999999999999999988888874
No 147
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=70.27 E-value=4.9 Score=38.59 Aligned_cols=41 Identities=12% Similarity=0.022 Sum_probs=37.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++.|+++.++|+-+...+..+-+.+|+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 46799999999999999999999999999999999998875
No 148
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=69.76 E-value=5.7 Score=40.35 Aligned_cols=48 Identities=23% Similarity=0.272 Sum_probs=41.3
Q ss_pred hhhHHHHHHHhcCCCCeeeEEeecCCC-----------------eEEEEeCCCCCCHHHHHHHHH
Q 003131 140 AACVNSVEGILRGLPGVKRAVVALATS-----------------LGEVEYDPTVISKDDIANAIE 187 (845)
Q Consensus 140 ~~C~~~ie~~l~~~~GV~~~~v~~~~~-----------------~~~v~~~~~~~~~~~i~~~i~ 187 (845)
+.|-|-+|..+.+++||.++.+-++.+ .+.|.|||..++.++|++..=
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 468888999999999999999887755 389999999999999988653
No 149
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=69.58 E-value=2.9 Score=40.59 Aligned_cols=41 Identities=17% Similarity=0.144 Sum_probs=36.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNW---------------RTAHAVAREVCV 843 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~---------------~tA~~iA~~~GI 843 (845)
.++.|++.++|++|++.|+++.++|+-.. .....+.+++|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999887 677778888875
No 150
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=69.02 E-value=3.8 Score=39.74 Aligned_cols=40 Identities=10% Similarity=0.018 Sum_probs=36.9
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 805 VKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 805 lr~~~~~~I~~L~~~-gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 679999999999999 9999999999999999988888875
No 151
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=68.57 E-value=7.8 Score=39.02 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=42.2
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.|++++-- ...+-+...++|++|++.|+++++.||=....+..+.+++|+.
T Consensus 5 ~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNE---KNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDID 62 (279)
T ss_dssp CCEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCC
T ss_pred eEEEEEcCcCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 456777778887642 3468899999999999999999999999999999999999874
No 152
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=68.32 E-value=4.7 Score=43.11 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=38.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.++++.|+++|+++.++|+-....+..+-+.+|+.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~ 255 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLL 255 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCCh
Confidence 368899999999999999999999999999999888888874
No 153
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=68.26 E-value=2.9 Score=41.04 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=38.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDID 150 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcH
Confidence 357899999999999999999999999999999999998874
No 154
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=68.24 E-value=2.9 Score=40.68 Aligned_cols=41 Identities=10% Similarity=0.089 Sum_probs=37.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 46899999999999999999999999999999999998874
No 155
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=67.36 E-value=4.7 Score=39.54 Aligned_cols=41 Identities=15% Similarity=-0.011 Sum_probs=37.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46899999999999999999999999988888888888874
No 156
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=67.36 E-value=35 Score=41.65 Aligned_cols=203 Identities=15% Similarity=0.100 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHccCCCe----EEEEEecCCCceeeeEEeecCCcCCCCEEEEcCCCccCccEEEEe
Q 003131 406 TFVLFGKYLEILAKGKTSDAIKKLVELAPAT----ALLVVKDKVGKCIEEREIDALLIQSGDTLKVLPGTKLPADGIVVW 481 (845)
Q Consensus 406 ~~~~~~~~l~~~~~~k~~~~l~~l~~~~~~~----~~v~~~~r~g~~~~~~~i~~~~l~~GDii~v~~G~~vPaDg~ll~ 481 (845)
+-..++.+.|. ...++.++++++....... .++.+.-++=..+....+...|.+|-|.++++.++. -+|=-.+.
T Consensus 152 i~~~~~~~qe~-ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l-~VdES~LT 229 (1034)
T 3ixz_A 152 VTGCFGYYQEF-KSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGR-KVDNSSLT 229 (1034)
T ss_pred HHHHHHHHHHH-HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCCc-eEEecccC
Confidence 33345555555 4557888888875432221 111111111111145778888999999988875542 24555555
Q ss_pred ccee-eeccccCCcceeee----ccCCCceeccceeecceEEEEEEEecCccHHHHHHHHHHhhhcc-CChhhHHHHHHh
Q 003131 482 GTSY-VNESMVTGEAVPVL----KEINSPVIGGTINLHGVLHIQATKVGSDAVLSQIISLVETAQMS-KAPIQKFADFVA 555 (845)
Q Consensus 482 G~~~-Vdes~LTGEs~pv~----k~~~~~v~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~-~~~~~~~~~~~~ 555 (845)
|++. |.-+.-.-+..|.. --.|..+..|+...-=...+.=+..| .+.+..+..+..+.+ ...+.++...+.
T Consensus 230 GES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~G---kI~~~~~~~~~~~tpl~~~~~~~~~~l~ 306 (1034)
T 3ixz_A 230 GESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIG---RIASLASGVENEKTPIAIEIEHFVDIIA 306 (1034)
T ss_pred CCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhh---HHHHhhcccccCCCcHHHHHHHHHHHHH
Confidence 6554 32211111111211 13456666665321000000111111 111111111111100 113455556665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheeecccccchhhHHHHHHHHHH
Q 003131 556 SIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGV 627 (845)
Q Consensus 556 ~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~~P~~L~la~p~~~~~~~~~ 627 (845)
.+.+.+.+++.++.++...-+. ..+..++..+++.+..+.|.++.++..++.....++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~ 364 (1034)
T 3ixz_A 307 GLAILFGATFFIVAMCIGYTFL--------------RAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASK 364 (1034)
T ss_pred HHHHHHHHHHHHHHHHhcchHH--------------HHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhC
Confidence 5555444444433332211111 134556667778888888998888888887654443
No 157
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=67.27 E-value=5.4 Score=38.47 Aligned_cols=42 Identities=7% Similarity=0.125 Sum_probs=38.0
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.+++.+.++.|++.|+++.++|+........+.+.+|+.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 136 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLT 136 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 467899999999999999999999999999999888888864
No 158
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=67.12 E-value=6.2 Score=39.47 Aligned_cols=57 Identities=19% Similarity=0.170 Sum_probs=44.0
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG---DNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG---D~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.|++++- .+.+-++++++|++|+++|++++++|| -.........+++|+.
T Consensus 6 ~kli~~DlDGTLl~----~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 6 YKGYLIDLDGTMYN----GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp CSEEEEECSSSTTC----HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCcCceEe----CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 45677777888653 255668999999999999999999988 5566666666777763
No 159
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=66.86 E-value=5.8 Score=40.36 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=47.6
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.||+++.- +..+.+...++|++|++.|+++.+.||=+...+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 5 KLIAIDLDGTLLNS---KHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK 61 (288)
T ss_dssp CEEEEECCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred EEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45667778887542 4457889999999999999999999999999999999988864
No 160
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=66.77 E-value=4.9 Score=38.93 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=38.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 139 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMS 139 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcH
Confidence 356799999999999999999999999999999998888875
No 161
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=65.89 E-value=3.3 Score=42.72 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=47.8
Q ss_pred CeEEEEEECCeEEEEEEe-eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcC
Q 003131 784 RTGILVAYDDNLIGVMGI-ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVA--REVC 842 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~-~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA--~~~G 842 (845)
.+.+++-.|++++. - ...+-+++.++|++|++.|+++++.||=....+..+. +++|
T Consensus 27 ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 27 IKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLK 85 (301)
T ss_dssp CCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred ccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence 46788888999863 2 3457889999999999999999999999999999998 8876
No 162
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=65.55 E-value=3.3 Score=40.15 Aligned_cols=40 Identities=13% Similarity=0.146 Sum_probs=34.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++.|+++.++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 4679999999999999999999998866 467788888864
No 163
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=64.91 E-value=5.4 Score=39.98 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=44.4
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.|++++- -...+ ++++++|++|+++|++++++| |-.........+++|+.
T Consensus 5 ~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~ 64 (264)
T 3epr_A 5 YKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVE 64 (264)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCC
T ss_pred CCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 35566666777543 23456 899999999999999999999 77777777788888874
No 164
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=64.25 E-value=6.1 Score=39.58 Aligned_cols=57 Identities=16% Similarity=0.024 Sum_probs=46.7
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.||+++-- .++-+++.++|++|++.|++++++| |-.........+++|+.
T Consensus 17 ~~~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 17 IELFILDMDGTFYLD----DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp CCEEEECCBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CCEEEEcCcCcEEeC----CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 456777778887642 5677899999999999999999999 87888887788888874
No 165
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=64.15 E-value=6.8 Score=39.46 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=48.1
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+++-.|++++- =...+-+.+.++|++|++.|+++++.||-....+..+.+++|+
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 5 YKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM 61 (279)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred ceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence 45667777888752 2346789999999999999999999999999999999999886
No 166
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=64.00 E-value=4 Score=39.39 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=38.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 126 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLA 126 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCH
Confidence 367899999999999999999999999999999999988874
No 167
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=63.99 E-value=5.6 Score=39.63 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=46.1
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.|++++-- ...+.+.+.++|++|++.|+++++.||-+...+..+.+++|+.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 4 KIVFFDIDGTLLDE---QKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID 60 (258)
T ss_dssp CEEEECTBTTTBCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred eEEEEeCCCCCcCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence 34555556666542 3568899999999999999999999999999988998888764
No 168
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=63.87 E-value=7.4 Score=37.20 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++.+.++.|++.|+++.++|+........+.+.+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~ 134 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 134 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcH
Confidence 45789999999999999999999999998888888888764
No 169
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=63.77 E-value=9 Score=38.58 Aligned_cols=42 Identities=12% Similarity=-0.042 Sum_probs=38.2
Q ss_pred CCCChhHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGV--RPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi--~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-++.|++.++++.|++.|+ ++.++|+.....+..+.+.+|+.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~ 184 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIA 184 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcc
Confidence 3578999999999999999 99999999999999999988875
No 170
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=63.06 E-value=5.7 Score=37.48 Aligned_cols=40 Identities=10% Similarity=-0.016 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++.| ++.++|+.+......+.+.+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999999888888888763
No 171
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=62.34 E-value=4.3 Score=40.62 Aligned_cols=42 Identities=7% Similarity=-0.094 Sum_probs=30.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNW----RTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~----~tA~~iA~~~GI~ 844 (845)
.++.|++.+.++.|++.|+++.++||=.. ..+..--+++||+
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 45678888888888888888888887543 4556666667775
No 172
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=61.79 E-value=6.2 Score=37.02 Aligned_cols=40 Identities=13% Similarity=0.082 Sum_probs=34.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++.+.++.|++.|+++.++|++...... +.+.+|+.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~ 124 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVE 124 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCG
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCch
Confidence 35799999999999999999999999988877 77777763
No 173
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=61.20 E-value=7.3 Score=39.51 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=49.0
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.||+++- =...+-+.+.++|++|++.|+++++.||=....+..+.+++|+.
T Consensus 6 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 6 KQLLALNIDGALLR---SNGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred ceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 45677777888753 23468899999999999999999999999999999999999875
No 174
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=61.17 E-value=8.5 Score=37.07 Aligned_cols=41 Identities=5% Similarity=0.022 Sum_probs=36.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDN---WRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~---~~tA~~iA~~~GI~ 844 (845)
.+.+++.+.++.|++.|+++.++|+.. ......+.+.+|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999999 88888888888764
No 175
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=61.05 E-value=6.7 Score=38.87 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=37.7
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 446789999999999999999999999999999999888863
No 176
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=60.68 E-value=5 Score=37.56 Aligned_cols=47 Identities=21% Similarity=0.405 Sum_probs=38.1
Q ss_pred hhhHHHHHHHhcCC--CCeeeEEeecCCC-------------------------eEEEEeCCCCCCHHHHHHHH
Q 003131 140 AACVNSVEGILRGL--PGVKRAVVALATS-------------------------LGEVEYDPTVISKDDIANAI 186 (845)
Q Consensus 140 ~~C~~~ie~~l~~~--~GV~~~~v~~~~~-------------------------~~~v~~~~~~~~~~~i~~~i 186 (845)
+.|-|-+|..+.++ +||.++.+-++.+ .+.|.|||..++.++|++..
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~F 99 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFF 99 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHH
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHH
Confidence 45778888888888 8998877766544 38899999999999998866
No 177
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=60.27 E-value=5 Score=40.77 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=49.1
Q ss_pred HHHccCeEEEEEECCeEEEEEEeeC-CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 779 LEESARTGILVAYDDNLIGVMGIAD-PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 779 ~~~~g~~~l~va~~~~~lG~~~~~D-~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
+.....+.+++-.|++++- -.. .+-+.+.++|++|++.|+++++.||=....+..+.+++|+
T Consensus 16 ~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 16 YFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp ---CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGG
T ss_pred hhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3455567788888998751 122 5789999999999999999999999999999998888764
No 178
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=60.24 E-value=10 Score=35.95 Aligned_cols=49 Identities=22% Similarity=0.173 Sum_probs=40.8
Q ss_pred hhhHHHHhhhccCCCceEEEeecCCC-------------------eEEEEeCCCCCChhhHHHhhhhc
Q 003131 215 LDAHFLEGILSNFKGVRQFRFDKISG-------------------ELEVLFDPEALSSRSLVDGIAGR 263 (845)
Q Consensus 215 ~c~~~ie~~l~~~~gV~~~~v~~~~~-------------------~~~V~~d~~~~~~~~i~~~i~~~ 263 (845)
.|-.-+|..+..++||.++.+-.+++ .+.|.|||..++.++|++..-..
T Consensus 51 GCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~~ 118 (199)
T 1fvg_A 51 GCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWEN 118 (199)
T ss_dssp SSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHHT
T ss_pred CCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46677888899999999999877653 47899999999999999886654
No 179
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=59.55 E-value=7.7 Score=37.04 Aligned_cols=39 Identities=13% Similarity=0.032 Sum_probs=35.5
Q ss_pred ChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 806 KREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 806 r~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+++.+.++.|++.|+++.++|+........+.+.+|+.
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 689999999999999999999999999888888888864
No 180
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=58.42 E-value=6.1 Score=38.77 Aligned_cols=39 Identities=13% Similarity=0.140 Sum_probs=35.0
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
+.|++.+.++.|++.|+++.++|+.....+..+-+.+|+
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 568999999999999999999999988888888888775
No 181
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=58.18 E-value=20 Score=32.95 Aligned_cols=49 Identities=18% Similarity=0.354 Sum_probs=41.7
Q ss_pred hhhHHHHHHhhhCCCCceEEEEEeecc---------------EEEEEECCCCCCHHHHHHHHHh
Q 003131 58 AACSNSVEGALMGLKGVAKASVALLQN---------------KADVVFDPDLVKDEDIKNAIED 106 (845)
Q Consensus 58 ~~C~~~ie~~l~~~~gv~~~~v~~~~~---------------~~~v~~~~~~~~~~~i~~~i~~ 106 (845)
++|=|-+|..+.+++||.++.+-+..+ .+.|.||+..++.+++.+..=.
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 578999999999999999999977654 6778899999999998886644
No 182
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=57.67 E-value=2.2 Score=40.63 Aligned_cols=40 Identities=13% Similarity=0.036 Sum_probs=33.1
Q ss_pred CCCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcC
Q 003131 803 DPVKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~-gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
-++.|++.++++.|++. |+++.++|+-....+..+.+.+|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~g 112 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYR 112 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhC
Confidence 36789999999999999 99999999987766666655554
No 183
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=57.37 E-value=4.8 Score=40.38 Aligned_cols=42 Identities=7% Similarity=-0.138 Sum_probs=30.3
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNW----RTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~----~tA~~iA~~~GI~ 844 (845)
+++.|++.+.++.|++.|+++.++||=+. ..+..--+++||+
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 45678888888888888888888886533 4555556667765
No 184
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=57.23 E-value=5.8 Score=41.86 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=42.3
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDN----WRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~----~~tA~~iA~~~GI~ 844 (845)
.+.+.+-.|+++ .-.+.+-|++.++++.|++.|+++.++|+-. ...+..+++.+||+
T Consensus 13 ~~~~l~D~DGvl----~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 13 KIAFAFDIDGVL----FRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp CEEEEECCBTTT----EETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCee----EcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 344555556554 2345666999999999999999999999875 45677777778874
No 185
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=55.56 E-value=9.2 Score=38.07 Aligned_cols=40 Identities=13% Similarity=-0.041 Sum_probs=35.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~ 150 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKE 150 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCc
Confidence 5789999999999999999999999999888888877664
No 186
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=55.25 E-value=9.7 Score=36.21 Aligned_cols=35 Identities=11% Similarity=0.047 Sum_probs=29.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVA 838 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA 838 (845)
++.|++.++++.|++.|+++.++||-....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 56799999999999999999999998887765544
No 187
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=55.20 E-value=12 Score=35.22 Aligned_cols=49 Identities=18% Similarity=0.144 Sum_probs=39.9
Q ss_pred hhhHHHHhhhccCCCceEEEeecCCC-------------------eEEEEeCCCCCChhhHHHhhhhc
Q 003131 215 LDAHFLEGILSNFKGVRQFRFDKISG-------------------ELEVLFDPEALSSRSLVDGIAGR 263 (845)
Q Consensus 215 ~c~~~ie~~l~~~~gV~~~~v~~~~~-------------------~~~V~~d~~~~~~~~i~~~i~~~ 263 (845)
.|-.-+|..+..++||.++.+-.+++ .+.|.|||..++.++|++..-..
T Consensus 10 GCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~~~ 77 (193)
T 3bqh_A 10 GCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRV 77 (193)
T ss_dssp SCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred CCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 46677888899999999998776553 37899999999999999876543
No 188
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=54.79 E-value=12 Score=34.61 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=31.7
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++.+.++.|++.|+++.++|++.. .+..+.+.+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 578999999999999999999998765 456666777653
No 189
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=54.31 E-value=6.4 Score=37.70 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=35.6
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++ |+++.++|+.+...+..+-+.+|+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~ 123 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCch
Confidence 467999999999999 9999999999888888888888874
No 190
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=54.30 E-value=8.3 Score=38.65 Aligned_cols=42 Identities=7% Similarity=-0.062 Sum_probs=30.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDN---WRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~---~~tA~~iA~~~GI~ 844 (845)
.++.|++.++|+.|++.|+++.++||-. .......-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4567888999999999999999999866 33334444556664
No 191
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=54.17 E-value=3.7e+02 Score=32.66 Aligned_cols=145 Identities=12% Similarity=0.154 Sum_probs=80.7
Q ss_pred CceEEEEEeCCCCchh----hHHHHHHhhhCCCCceEEEEEe-e--ccEEEEEECCCCCCHH----HHHHHHHhc--Ccc
Q 003131 44 GMRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVAL-L--QNKADVVFDPDLVKDE----DIKNAIEDA--GFE 110 (845)
Q Consensus 44 ~~~~~~~~v~gm~C~~----C~~~ie~~l~~~~gv~~~~v~~-~--~~~~~v~~~~~~~~~~----~i~~~i~~~--Gy~ 110 (845)
..-.+...-+|.+-.. -...+|+.++..+|+.++...- . .....+.++.. .+.+ ++.+.+.+. .+.
T Consensus 41 ~~v~V~~~~pgas~~~ve~~vt~~iE~~l~~~~~v~~i~s~s~~~g~~~i~v~~~~~-~d~~~a~~~v~~~~~~~~~~lP 119 (1057)
T 4dx5_A 41 PAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESG-TDADIAQVQVQNKLQLAMPLLP 119 (1057)
T ss_dssp CEEEEEEECTTCCHHHHHHHTHHHHHHTCCSCTTEEEEEEEEETTSEEEEEEEECTT-CCHHHHHHHHHHHHHHHGGGSC
T ss_pred ceEEEEEEeCCCCHHHHHHHHHHHHHHHHcCCCCcEEEEEEecCCCeEEEEEEEeCC-CCHHHHHHHHHHHHHHHHhhCC
Confidence 3344556667766543 3567889999999999886543 2 23455666554 3433 444444432 122
Q ss_pred hhhhcccCC-CCCCCCceeeeccccCC--ccc---hhh-HHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCC-----CCC
Q 003131 111 AEILAESST-SGPKPQGTIVGQYTIGG--MTC---AAC-VNSVEGILRGLPGVKRAVVALATSLGEVEYDPT-----VIS 178 (845)
Q Consensus 111 ~~~~~~~~~-~~~~~~~~~~~~~~v~g--m~C---~~C-~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~-----~~~ 178 (845)
....++... ........-.+.+.-++ ++- ..- .+.+++.|++++||.++.+.-....+.|..|++ .++
T Consensus 120 ~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt 199 (1057)
T 4dx5_A 120 QEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLT 199 (1057)
T ss_dssp HHHHHHCCEEEEBCSSCSEEEEEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCC
T ss_pred CccCCCcceeccCCCcceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCC
Confidence 111100000 00000111122222211 111 122 367899999999999999865556778888874 378
Q ss_pred HHHHHHHHHhc
Q 003131 179 KDDIANAIEDA 189 (845)
Q Consensus 179 ~~~i~~~i~~~ 189 (845)
..++.+.|+..
T Consensus 200 ~~~v~~~l~~~ 210 (1057)
T 4dx5_A 200 PVDVITAIKAQ 210 (1057)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 89999999864
No 192
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=53.94 E-value=6.5 Score=38.31 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=36.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
-++.|++.++++.|++.| ++.++|+-....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999998888888888876
No 193
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=53.76 E-value=3.7e+02 Score=32.60 Aligned_cols=144 Identities=13% Similarity=0.151 Sum_probs=78.7
Q ss_pred ceEEEEEeCCCCchh----hHHHHHHhhhCCCCceEEEEEee--ccEEEEEECCCCCCH----HHHHHHHHhcC--cchh
Q 003131 45 MRRIQVGVTGMTCAA----CSNSVEGALMGLKGVAKASVALL--QNKADVVFDPDLVKD----EDIKNAIEDAG--FEAE 112 (845)
Q Consensus 45 ~~~~~~~v~gm~C~~----C~~~ie~~l~~~~gv~~~~v~~~--~~~~~v~~~~~~~~~----~~i~~~i~~~G--y~~~ 112 (845)
.-.+...-+|.+-.. -...+|+.+++.|||.++.-.-. .....+.+++. .+. +++.+.+.+.- +...
T Consensus 53 ~v~V~~~~pg~s~~~~~~~v~~~iE~~l~~~~~v~~v~s~s~~g~~~i~v~~~~~-~d~~~~~~~v~~~~~~~~~~lP~~ 131 (1054)
T 3ne5_A 53 QVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDG-TDPYWARSRVLEYLNQVQGKLPAG 131 (1054)
T ss_dssp EEEEEEECTTCCHHHHHHHTHHHHHHHHTTSTTEEEEEEEEETTEEEEEEEECTT-CCHHHHHHHHHHHHHTTSTTSCSS
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCceEEEEEEeCCeEEEEEEEECC-CCHHHHHHHHHHHHHHHHhcCCCc
Confidence 334455556765433 34568999999999998853322 33556666654 233 23444444331 1100
Q ss_pred hhcccCCCCCCCCceeeeccccC---C-ccch---hhHH-HHHHHhcCCCCeeeEEeecC-CCeEEEEeCCC-----CCC
Q 003131 113 ILAESSTSGPKPQGTIVGQYTIG---G-MTCA---ACVN-SVEGILRGLPGVKRAVVALA-TSLGEVEYDPT-----VIS 178 (845)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~---g-m~C~---~C~~-~ie~~l~~~~GV~~~~v~~~-~~~~~v~~~~~-----~~~ 178 (845)
. .... ............+.+. | .+-. .-+. .++..|++++||.++.+.-. ...+.|..|++ .++
T Consensus 132 ~-~~~~-~~~~~~~~~~~~~~l~~~~g~~~~~~L~~~a~~~~~~~l~~~pgv~~V~~~g~~~~~i~i~id~~kl~~~gls 209 (1054)
T 3ne5_A 132 V-SAEL-GPDATGVGWIYEYALVDRSGKHDLADLRSLQDWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGIS 209 (1054)
T ss_dssp C-CEEE-CCSSCGGGEEEEEEEEESSSSSCHHHHHHHHHHTHHHHHTTSTTEEEEEEEESCCEEEEEEECHHHHHHTTCC
T ss_pred C-CCCC-CCCCCCccceEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCCcEEEEEEECHHHHHHcCCC
Confidence 0 0000 0000111112233332 1 2211 1233 36778999999999987643 35788888874 478
Q ss_pred HHHHHHHHHhcCC
Q 003131 179 KDDIANAIEDAGF 191 (845)
Q Consensus 179 ~~~i~~~i~~~G~ 191 (845)
..++.+.|+....
T Consensus 210 ~~~v~~~l~~~~~ 222 (1054)
T 3ne5_A 210 LAEVKSALDASNQ 222 (1054)
T ss_dssp HHHHHHHHHTSSC
T ss_pred HHHHHHHHHHhcC
Confidence 8999999987643
No 194
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=53.56 E-value=13 Score=35.90 Aligned_cols=39 Identities=10% Similarity=0.130 Sum_probs=33.2
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~ 130 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAII 130 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCT
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcH
Confidence 4789999999999999999999999754 67777777764
No 195
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.33 E-value=10 Score=36.42 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=36.0
Q ss_pred CCChhHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMG-VRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~g-i~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+++.+.++.|++.| +++.++|+........+.+.+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~ 146 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLS 146 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcH
Confidence 56889999999999999 999999998888888888888763
No 196
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=53.31 E-value=15 Score=36.06 Aligned_cols=49 Identities=22% Similarity=0.225 Sum_probs=40.6
Q ss_pred hhhHHHHhhhccCCCceEEEeecCCC-------------------eEEEEeCCCCCChhhHHHhhhhc
Q 003131 215 LDAHFLEGILSNFKGVRQFRFDKISG-------------------ELEVLFDPEALSSRSLVDGIAGR 263 (845)
Q Consensus 215 ~c~~~ie~~l~~~~gV~~~~v~~~~~-------------------~~~V~~d~~~~~~~~i~~~i~~~ 263 (845)
.|-.-+|..+..++||.++.+-.+++ .+.|.|||..++-++|++..-..
T Consensus 102 GCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw~~ 169 (261)
T 2j89_A 102 GCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLWAR 169 (261)
T ss_dssp SSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred CCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHHHh
Confidence 56677888899999999999877653 47899999999999999876554
No 197
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=52.40 E-value=14 Score=36.86 Aligned_cols=40 Identities=15% Similarity=0.205 Sum_probs=35.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++ ++++.++|+.+...+..+-+.+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 678999999999998 6999999999999888888888874
No 198
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=51.34 E-value=11 Score=36.74 Aligned_cols=41 Identities=17% Similarity=0.140 Sum_probs=32.1
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.++.+++.+.++.|++.|+++.++|+..........+. |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887776666655 653
No 199
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=50.11 E-value=16 Score=38.08 Aligned_cols=48 Identities=2% Similarity=-0.006 Sum_probs=41.4
Q ss_pred EEEEeeCCCChhHHHHHHHHH-hC----------CCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 797 GVMGIADPVKREAAVVVEGLL-KM----------GVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 797 G~~~~~D~lr~~~~~~I~~L~-~~----------gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
|++.+..++-++..+++.++. .. |+.++++||+.......+++++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld 94 (335)
T 3n28_A 36 SWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELD 94 (335)
T ss_dssp CEEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCE
T ss_pred eEEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCC
Confidence 456678888899999999888 33 7899999999999999999999985
No 200
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=49.69 E-value=18 Score=36.04 Aligned_cols=38 Identities=5% Similarity=0.052 Sum_probs=33.5
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~ 840 (845)
-++.|++.++++.|+++|+++.++|.-+...+..+-+.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 47899999999999999999999999998887776553
No 201
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=48.11 E-value=12 Score=36.43 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=33.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l 147 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NF 147 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hH
Confidence 36789999999999999999999999887776665555 55
No 202
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=47.40 E-value=19 Score=36.81 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=44.6
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.|++++- .+++-+++.+++++|++.|++++++| |-.........+++|+.
T Consensus 21 ~k~i~~D~DGTL~~----~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 21 AQGVLFDCDGVLWN----GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp CSEEEECSBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEECCCCcEec----CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56777777888763 45677899999999999999999999 56666666666677764
No 203
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=47.13 E-value=14 Score=32.23 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCH
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNW 831 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~ 831 (845)
++.+++.+++++|++.|+++.+.||-..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 4668999999999999999999999865
No 204
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=47.04 E-value=8.8 Score=36.45 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=32.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~ 840 (845)
++.|++.+.++.|++ |+++.++|+........+.+.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467999999999999 999999999988888877776
No 205
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=46.85 E-value=7.5 Score=36.92 Aligned_cols=40 Identities=15% Similarity=0.083 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 4689999999999999 999999999999888888888763
No 206
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=46.74 E-value=17 Score=35.01 Aligned_cols=40 Identities=15% Similarity=-0.012 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.+++.+.++.|+ .|+++.++|+........+-+.+|+.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~ 146 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVD 146 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChH
Confidence 56899999999999 89999999999998888888888764
No 207
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=46.37 E-value=17 Score=35.67 Aligned_cols=39 Identities=10% Similarity=0.098 Sum_probs=35.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|+ |+++.++|+.+...+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999999998888874
No 208
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=46.32 E-value=14 Score=36.65 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+++.+.++.|++.|+++.++|++....+..+.+.+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999998888887777654
No 209
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=44.36 E-value=23 Score=35.90 Aligned_cols=49 Identities=20% Similarity=0.173 Sum_probs=40.6
Q ss_pred hhhHHHHhhhccCCCceEEEeecCCC-----------------eEEEEeCCCCCChhhHHHhhhhc
Q 003131 215 LDAHFLEGILSNFKGVRQFRFDKISG-----------------ELEVLFDPEALSSRSLVDGIAGR 263 (845)
Q Consensus 215 ~c~~~ie~~l~~~~gV~~~~v~~~~~-----------------~~~V~~d~~~~~~~~i~~~i~~~ 263 (845)
.|---+|..+..++||.++.+-.+++ .+.|.|||..++.++|++..-..
T Consensus 10 GCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~~ 75 (313)
T 3e0m_A 10 GCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFRV 75 (313)
T ss_dssp SCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHHH
T ss_pred CCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHhh
Confidence 46677888999999999999877654 37899999999999999876543
No 210
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=44.26 E-value=9 Score=38.50 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=42.6
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhH-HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREA-AVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~-~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
+.+++-.|++++.- ...+-+.. .++|++|++.|+++++.||=+...+..+.+++++
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 60 (271)
T 1rlm_A 4 KVIVTDMDGTFLND---AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKD 60 (271)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTT
T ss_pred cEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCC
Confidence 45666667777541 23456664 8999999999999999999999888777766653
No 211
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=44.26 E-value=17 Score=35.66 Aligned_cols=40 Identities=10% Similarity=0.035 Sum_probs=34.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.+++.++++.|+ .|+++.++|+.....+....+.+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56799999999999 89999999999988888888777763
No 212
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=44.16 E-value=1e+02 Score=25.35 Aligned_cols=56 Identities=21% Similarity=0.275 Sum_probs=43.5
Q ss_pred EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
..+...|+.|+.-.-...+++.+++. .+...|..++. ...+.+...++..||.+..
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~ 82 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGHEVLE 82 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSCCEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEE
Confidence 56999999999999999999998743 23455655544 4467888899999998754
No 213
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=43.96 E-value=23 Score=35.60 Aligned_cols=57 Identities=11% Similarity=-0.049 Sum_probs=44.1
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTG---DNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTG---D~~~tA~~iA~~~GI~ 844 (845)
.+.+.+-.|++++- .+++-+++.++|++|++.|++++++|+ -.........+++|+.
T Consensus 14 ~k~i~~D~DGtL~~----~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 14 YKCIFFDAFGVLKT----YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp CSEEEECSBTTTEE----TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCEEEEcCcCCcCc----CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 56677777887754 345568999999999999999999996 5556666666777774
No 214
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=43.86 E-value=41 Score=31.86 Aligned_cols=49 Identities=14% Similarity=0.312 Sum_probs=40.7
Q ss_pred hhhHHHHHHhhhCCCCceEEEEEeec---------------cEEEEEECCCCCCHHHHHHHHHh
Q 003131 58 AACSNSVEGALMGLKGVAKASVALLQ---------------NKADVVFDPDLVKDEDIKNAIED 106 (845)
Q Consensus 58 ~~C~~~ie~~l~~~~gv~~~~v~~~~---------------~~~~v~~~~~~~~~~~i~~~i~~ 106 (845)
++|=|-+|..+.+++||.++.+-+.. +.+.|.||+..++.+++.+..=+
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff~ 95 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFFQ 95 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 67888899999999999999987654 45778899999999998876543
No 215
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=43.69 E-value=66 Score=26.23 Aligned_cols=69 Identities=22% Similarity=0.094 Sum_probs=50.6
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEE-----eecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAV-----VALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~-----v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
.+++.+.+-..|-++ .-.+-+.|.+++||..+. ++..+..+.++.....++.++|.++|+++|-..+-.
T Consensus 6 irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 6 LIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV 79 (97)
T ss_dssp EEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 455555555444333 455667788888987755 456778888888888899999999999999887753
No 216
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=43.52 E-value=5.3 Score=37.95 Aligned_cols=40 Identities=8% Similarity=-0.108 Sum_probs=31.3
Q ss_pred CCCChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcC
Q 003131 803 DPVKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~-gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
-++.|++.++++.|++. |+++.++|+-....+..+-+.+|
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~ 114 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYA 114 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhc
Confidence 36789999999999999 99999999977655444444433
No 217
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=43.45 E-value=1.1e+02 Score=25.30 Aligned_cols=58 Identities=19% Similarity=0.262 Sum_probs=43.5
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeec
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQ 197 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 197 (845)
..+...|+.|+.-.-+..++|++++. .+.+.|..|.. ...++|.+.++..||+.....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYP-MSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSC-THHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEE
Confidence 46889999999999999999998632 12344444433 457899999999999986544
No 218
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=43.44 E-value=11 Score=35.37 Aligned_cols=39 Identities=0% Similarity=0.043 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 56799999 9999999 999999999999888888888874
No 219
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=43.37 E-value=39 Score=32.22 Aligned_cols=59 Identities=20% Similarity=0.295 Sum_probs=45.2
Q ss_pred CCCceEEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeec-------------------cEEEEEECCCCCCHHHHHH
Q 003131 42 GDGMRRIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQ-------------------NKADVVFDPDLVKDEDIKN 102 (845)
Q Consensus 42 ~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~-------------------~~~~v~~~~~~~~~~~i~~ 102 (845)
..++.++.| + ++|=|-+|..+.+++||.++.+-+.. +.+.|.||+..++.+++.+
T Consensus 39 ~~~~~~a~f---a---gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~ 112 (211)
T 1ff3_A 39 PDGMEIAIF---A---MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQ 112 (211)
T ss_dssp CTTCEEEEE---E---CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHH
T ss_pred CCCceEEEE---e---cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHH
Confidence 345555554 2 57888889999999999999997763 3577889999999999887
Q ss_pred HHHh
Q 003131 103 AIED 106 (845)
Q Consensus 103 ~i~~ 106 (845)
..=+
T Consensus 113 ~F~~ 116 (211)
T 1ff3_A 113 VFWE 116 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 220
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=43.31 E-value=70 Score=28.92 Aligned_cols=119 Identities=13% Similarity=0.215 Sum_probs=64.5
Q ss_pred HHHHHHHHhcCcchhhhcccCCCCCCCCceeeeccccCCccchhhHH-------HHHHHhc-CCCCeeeEEeecCCCeEE
Q 003131 98 EDIKNAIEDAGFEAEILAESSTSGPKPQGTIVGQYTIGGMTCAACVN-------SVEGILR-GLPGVKRAVVALATSLGE 169 (845)
Q Consensus 98 ~~i~~~i~~~Gy~~~~~~~~~~~~~~~~~~~~~~~~v~gm~C~~C~~-------~ie~~l~-~~~GV~~~~v~~~~~~~~ 169 (845)
+++...+...|-+++..+-. . ..+.++..| .|.+|.. .||+.|. .+|.+..+........
T Consensus 14 ~~iRP~l~~dGGdvelv~v~-------~--~~V~v~l~G-aC~gC~ss~~Tlk~~Ie~~L~~~vpev~~V~~v~~~~e-- 81 (154)
T 2z51_A 14 DEIRPYLMSDGGNVALHEID-------G--NVVRVKLQG-ACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEET-- 81 (154)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-------T--TEEEEEEEH-HHHTCHHHHHHHHHHHHHHHHHHCTTCCEEEECCSSCC--
T ss_pred HHhChHHHhcCCeEEEEEEE-------C--CEEEEEEEC-CCCCCCccHhHHHHHHHHHHHHhCCCceEEEEccCchh--
Confidence 34555666666666554321 1 134555545 4777753 4556664 5677766554322110
Q ss_pred EEeCCCCCCHHHHHHHHHhc--------CCceeeeccCCcceeEEEEecccchhhh---HHHHhhhc-cCCCceEEE
Q 003131 170 VEYDPTVISKDDIANAIEDA--------GFEASFVQSSGQDKILLQVTGVLCELDA---HFLEGILS-NFKGVRQFR 234 (845)
Q Consensus 170 v~~~~~~~~~~~i~~~i~~~--------G~~~~~~~~~~~~~~~~~v~gm~c~~c~---~~ie~~l~-~~~gV~~~~ 234 (845)
.-..+.+.+.+.|++. |=++.+..- +.+.+++++.|- |..|. ..||+.|. ..|+|..+.
T Consensus 82 ----~l~L~~~~v~~~L~~iRP~L~~~dGGdvelv~v-~~~~v~v~l~Ga-c~~~~Tlk~~Ie~~l~e~vP~i~~V~ 152 (154)
T 2z51_A 82 ----GLELNEENIEKVLEEIRPYLIGTADGSLDLVEI-EDPIVKIRITGP-AAGVMTVRVAVTQKLREKIPSIAAVQ 152 (154)
T ss_dssp ----SCCSSHHHHHHHHHHHGGGCCGGGCCEEEEEEE-ETTEEEEEEESG-GGGCHHHHHHHHHHHHHHCTTCCEEE
T ss_pred ----hhHHHHHHHHHHHHHHHHHhhhcCCCCeEEEEE-ECCEEEEEEecC-CcccHhHHHHHHHHHHHHCCCccEEE
Confidence 0124556676666643 323333222 246777888886 76674 35776666 557777664
No 221
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=42.49 E-value=3e+02 Score=31.91 Aligned_cols=86 Identities=12% Similarity=0.111 Sum_probs=48.0
Q ss_pred HHHHHHHHHhhhccCC-hhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCCcCCCCCchHHHHHHHHhhhheee
Q 003131 530 LSQIISLVETAQMSKA-PIQKFADFVASIFVPIVVTLALFTWLCWYVAGVLGAYPEQWLPENGTHFVFALMFSISVVVIA 608 (845)
Q Consensus 530 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vlv~~ 608 (845)
+.++++..+..+.+-. ...+....+....+.+ .+++++.+.++.....+ ...+..++...+.....+
T Consensus 318 I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~i-a~~~~~~w~~~~~~~~~-----------~~~l~~ai~vlviacPca 385 (736)
T 3rfu_A 318 IVQMVSDAQRSRAPIQRLADTVSGWFVPAVILV-AVLSFIVWALLGPQPAL-----------SYGLIAAVSVLIIACPCA 385 (736)
T ss_dssp HHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHCSSSST-----------THHHHHHHHHHHHHCCST
T ss_pred HHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCchH-----------HHHHHHHHHhHHHhhhhH
Confidence 4455555555554433 3455555555544444 44445555554321000 013455666666677888
Q ss_pred cccccchhhHHHHHHHHHH
Q 003131 609 CPCALGLATPTAVMVATGV 627 (845)
Q Consensus 609 ~P~~L~la~p~~~~~~~~~ 627 (845)
.|.+.++++-.+...+.++
T Consensus 386 L~la~p~a~~~~~~~~a~~ 404 (736)
T 3rfu_A 386 LGLATPMSIMVGVGKGAQS 404 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 8888888888888776554
No 222
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=42.27 E-value=17 Score=36.14 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=33.5
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
++.|++.++++.|++.|+++.++|+.... ...+-+.+|+.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~ 145 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLR 145 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcH
Confidence 35799999999999999999999987664 57777778763
No 223
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=41.14 E-value=26 Score=33.28 Aligned_cols=42 Identities=12% Similarity=-0.011 Sum_probs=38.4
Q ss_pred eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 802 ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 802 ~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.=.+||++.+.+++|++. +++.+.|.-....|..+.+.+|+.
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 346799999999999998 999999999999999999999874
No 224
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=40.66 E-value=26 Score=33.54 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=36.2
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
-.+.+++.+.++.|++. +++.++|+.....+..+-+.+|+.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 142 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLF 142 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChH
Confidence 36789999999999999 999999999998888888888864
No 225
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=40.62 E-value=19 Score=37.42 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
++++++.++++.|++ |+.+.++|||+...+..+.+.+|+
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~ 141 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGV 141 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhh
Confidence 568999999999999 999999999997777777777776
No 226
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=39.34 E-value=20 Score=33.94 Aligned_cols=38 Identities=5% Similarity=0.098 Sum_probs=31.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+++.+.++.|++.|+++.++|++ ..+..+.+.+|+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l 128 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNL 128 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcCh
Confidence 56799999999999999999999998 344566666665
No 227
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=38.36 E-value=31 Score=32.20 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=37.8
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
=.+||++.+.+++|++. +++.+.|.-....|..+.+.+|..
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 45799999999999997 999999999999999999998864
No 228
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=38.34 E-value=28 Score=33.32 Aligned_cols=40 Identities=18% Similarity=0.113 Sum_probs=35.4
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
.+.|++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~ 139 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIK 139 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcH
Confidence 4678999999999999 999999999999888888888864
No 229
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=38.25 E-value=23 Score=35.39 Aligned_cols=40 Identities=10% Similarity=-0.045 Sum_probs=35.8
Q ss_pred CChhHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 805 VKREAAVVVEGLLKM-GVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 805 lr~~~~~~I~~L~~~-gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++.+.++.|++. |+++.++|+.....+..+.+.+|+.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 479999999999999 9999999999999888888888764
No 230
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=38.21 E-value=24 Score=38.08 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=32.4
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCC
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDN------------WRTAHAVAREVCV 843 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~------------~~tA~~iA~~~GI 843 (845)
+-|++.++|+.|+++|+++.++|+-. ...+..+.+++|+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999999999999999999999955 2236777777776
No 231
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=37.70 E-value=4.1 Score=38.67 Aligned_cols=30 Identities=20% Similarity=0.322 Sum_probs=26.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHH
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRT 833 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~t 833 (845)
++.|++.+.++.|++.|+++.++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999876554
No 232
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=37.27 E-value=64 Score=26.25 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=42.9
Q ss_pred HHHHHHHhcCCCCeeeEE-----eecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 143 VNSVEGILRGLPGVKRAV-----VALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 143 ~~~ie~~l~~~~GV~~~~-----v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
.-.+-+.|.+++||..+. ++..+..+.++.....++.++|.++|+++|-..+-.
T Consensus 20 ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 20 IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 345677889999988765 456677778887777799999999999999887753
No 233
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=36.78 E-value=1.5e+02 Score=23.24 Aligned_cols=57 Identities=16% Similarity=0.071 Sum_probs=42.5
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
..+...|+.|+.-.-+..++|++++. ...+.|..|.. ...++|.+.+++.||+....
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~-~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDP-ATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCT-THHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEE
Confidence 46788899999999999999998732 12334444433 45789999999999998654
No 234
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=36.25 E-value=92 Score=27.36 Aligned_cols=68 Identities=9% Similarity=0.112 Sum_probs=47.3
Q ss_pred HHHHHccCeEEEEEE--------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCe-E-EEEcCC------CHHHH
Q 003131 777 VELEESARTGILVAY--------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVR-P-VMVTGD------NWRTA 834 (845)
Q Consensus 777 ~~~~~~g~~~l~va~--------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~-v-~mlTGD------~~~tA 834 (845)
.-++..|+.++++.. +-.++|+-.+..+--+..+++++.|+++|.+ + +++-|= .....
T Consensus 25 ~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~ 104 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGVLSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDV 104 (137)
T ss_dssp HHHHHTTCEEEEEEEEECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHH
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhh
Confidence 345677888877754 4578888888888888899999999999862 3 455552 12223
Q ss_pred HHHHHHcCCC
Q 003131 835 HAVAREVCVI 844 (845)
Q Consensus 835 ~~iA~~~GI~ 844 (845)
...++++|++
T Consensus 105 ~~~~~~~G~d 114 (137)
T 1ccw_A 105 EKRFKDMGYD 114 (137)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHCCCC
Confidence 4567788764
No 235
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=35.51 E-value=23 Score=36.08 Aligned_cols=32 Identities=19% Similarity=0.166 Sum_probs=27.4
Q ss_pred eeCCCChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 003131 801 IADPVKREAAVVVEGLLKMGVRPVMVTGDNWR 832 (845)
Q Consensus 801 ~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~ 832 (845)
.++++.|++.++++.|++.|+++.++||=...
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESG 216 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 35778899999999999999999999987643
No 236
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=35.33 E-value=1.2e+02 Score=24.70 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=46.3
Q ss_pred ceeEEEEecccchhhhHHHHhhhccCCCceEEE-----eecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcc
Q 003131 202 DKILLQVTGVLCELDAHFLEGILSNFKGVRQFR-----FDKISGELEVLFDPEALSSRSLVDGIAGRSNGKF 268 (845)
Q Consensus 202 ~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~-----v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~ 268 (845)
+|+.+.+-.. ...-.-.+-+.|.+++||..++ ++..+..+.|+-....++-+++.+.|++.|...+
T Consensus 7 rRlVLDVlKP-h~p~i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IH 77 (97)
T 2raq_A 7 IRIVLDILKP-HEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIH 77 (97)
T ss_dssp EEEEEEEECC-SCSCHHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEE
T ss_pred eEEEEEecCC-CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 3444555432 2223344566777888888765 4557888999998889999999999999985444
No 237
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=34.43 E-value=1e+02 Score=25.02 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=40.8
Q ss_pred hHHHHhhhccCCCceEEEe-----ecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcc
Q 003131 217 AHFLEGILSNFKGVRQFRF-----DKISGELEVLFDPEALSSRSLVDGIAGRSNGKF 268 (845)
Q Consensus 217 ~~~ie~~l~~~~gV~~~~v-----~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~ 268 (845)
.-.+.+.+.+++||..+++ +..+..+.|+-....++-+++.+.|++.|...+
T Consensus 20 ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IH 76 (96)
T 2x3d_A 20 IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIH 76 (96)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 3445667888899887764 456788888888888999999999999884443
No 238
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=34.25 E-value=91 Score=38.10 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=76.7
Q ss_pred HHHHHHHhcCCCCeeeEEeec---CCCeEEEEeCCCCCC---HHHHHHHHHhc--CCcee-----eec--cCCcceeEEE
Q 003131 143 VNSVEGILRGLPGVKRAVVAL---ATSLGEVEYDPTVIS---KDDIANAIEDA--GFEAS-----FVQ--SSGQDKILLQ 207 (845)
Q Consensus 143 ~~~ie~~l~~~~GV~~~~v~~---~~~~~~v~~~~~~~~---~~~i~~~i~~~--G~~~~-----~~~--~~~~~~~~~~ 207 (845)
...+|+.+.+++||+++.... ....+.+++++..-. ..++.+.+++. .+... +.. ......+.+.
T Consensus 62 ~~~iE~~l~~~~~v~~v~s~sg~~~~~~i~v~~~~~~~~~~~~~~v~~~l~~~~~~lP~~~~~p~i~~~~~~~~~~~~~~ 141 (1052)
T 2v50_A 62 VQVIEQQMNGIDNLRYISSESNSDGSMTITVTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGIRVTKAVKNFLMVVG 141 (1052)
T ss_dssp HHHHHTTCCSCTTEEEEECCEETTSEEEEEEEECSSCCHHHHHHHHHHHHHHHGGGSCHHHHTTCCEEECEEEEEEEEEE
T ss_pred HHHHHHHHcCCCCceEEEEEecCCCeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhCCCCCCCCeeEecCCCCcceEEEE
Confidence 467888899999999887654 234557788765321 23566666532 12111 110 0112245677
Q ss_pred Eeccc--ch-----hh-hHHHHhhhccCCCceEEEeecCCCeEEEEeCCCC-----CChhhHHHhhhh
Q 003131 208 VTGVL--CE-----LD-AHFLEGILSNFKGVRQFRFDKISGELEVLFDPEA-----LSSRSLVDGIAG 262 (845)
Q Consensus 208 v~gm~--c~-----~c-~~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~-----~~~~~i~~~i~~ 262 (845)
+.|-+ -+ .- ...+++.|...+||.+++.+.....+.|..||.+ ++..++.+.++.
T Consensus 142 l~g~~~~~~~~~L~~~a~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~ 209 (1052)
T 2v50_A 142 VVSTDGSMTKEDLSNYIVSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQA 209 (1052)
T ss_dssp EEESSTTSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHH
T ss_pred EEcCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHh
Confidence 76643 11 22 3579999999999999998866677889999863 788888888763
No 239
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=34.08 E-value=38 Score=32.90 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=29.4
Q ss_pred CCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 003131 803 DPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHA 836 (845)
Q Consensus 803 D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~ 836 (845)
-.+.+++.++++.|++.|+++.++|+........
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~ 144 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDM 144 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHH
Confidence 3578999999999999999999999998765544
No 240
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=33.54 E-value=1.3e+02 Score=24.56 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=11.5
Q ss_pred hhhccCCCceEEEeec
Q 003131 222 GILSNFKGVRQFRFDK 237 (845)
Q Consensus 222 ~~l~~~~gV~~~~v~~ 237 (845)
+.++.++||.++..-+
T Consensus 61 ~~I~~i~GVlst~lvy 76 (95)
T 2jsx_A 61 ESVRNVEGVLAVSLVY 76 (95)
T ss_dssp HHHTTSTTEEEEEESS
T ss_pred HHHhcCCCccEEeEEE
Confidence 4677889998876443
No 241
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=33.27 E-value=51 Score=32.11 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=39.5
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCV 843 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI 843 (845)
.+.+.+-.|++++- .+++-+++.++++.|++.|+++.++| |-........-+++|+
T Consensus 7 ik~i~fDlDGTLld----~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~ 65 (259)
T 2ho4_A 7 LKAVLVDLNGTLHI----EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEF 65 (259)
T ss_dssp CCEEEEESSSSSCC-------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTC
T ss_pred CCEEEEeCcCcEEe----CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCC
Confidence 45677777888764 34455788999999999999999999 5555544444445565
No 242
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=33.03 E-value=1.5e+02 Score=36.26 Aligned_cols=119 Identities=14% Similarity=0.171 Sum_probs=75.7
Q ss_pred HHHHHHHhcCCCCeeeEEeec---CCCeEEEEeCCCCCCHH----HHHHHHHhc--CCc-------eeeeccCCcceeEE
Q 003131 143 VNSVEGILRGLPGVKRAVVAL---ATSLGEVEYDPTVISKD----DIANAIEDA--GFE-------ASFVQSSGQDKILL 206 (845)
Q Consensus 143 ~~~ie~~l~~~~GV~~~~v~~---~~~~~~v~~~~~~~~~~----~i~~~i~~~--G~~-------~~~~~~~~~~~~~~ 206 (845)
...+|+.+.+++||+++.-.. ....+.++++++ .+.+ ++.+.+.+. .+. +............+
T Consensus 62 t~~iE~~l~~~~~v~~i~s~s~~~g~~~i~v~~~~~-~d~~~a~~~v~~~~~~~~~~lP~~~~~p~~~~~~~~~~~~~~~ 140 (1057)
T 4dx5_A 62 TQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESG-TDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVV 140 (1057)
T ss_dssp HHHHHHTCCSCTTEEEEEEEEETTSEEEEEEEECTT-CCHHHHHHHHHHHHHHHGGGSCHHHHHHCCEEEEBCSSCSEEE
T ss_pred HHHHHHHHcCCCCcEEEEEEecCCCeEEEEEEEeCC-CCHHHHHHHHHHHHHHHHhhCCCccCCCcceeccCCCcceEEE
Confidence 467899999999999876544 234567778775 3433 444445432 121 11111112223456
Q ss_pred EEeccc----ch---hhh-HHHHhhhccCCCceEEEeecCCCeEEEEeCCCC-----CChhhHHHhhhh
Q 003131 207 QVTGVL----CE---LDA-HFLEGILSNFKGVRQFRFDKISGELEVLFDPEA-----LSSRSLVDGIAG 262 (845)
Q Consensus 207 ~v~gm~----c~---~c~-~~ie~~l~~~~gV~~~~v~~~~~~~~V~~d~~~-----~~~~~i~~~i~~ 262 (845)
.+.|-+ -. ..+ ..+++.|.+.+||.++++......+.|..||.+ ++..++.+.++.
T Consensus 141 ~l~~~~~~~~~~~L~~~a~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 141 GVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp EEEETTSCSCHHHHHHHHHHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 665532 11 223 578999999999999998655667789999874 788898888875
No 243
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=32.65 E-value=17 Score=21.27 Aligned_cols=18 Identities=22% Similarity=0.538 Sum_probs=9.7
Q ss_pred CCCCCCCCcccccccccC
Q 003131 16 GGGSSDGDDREDEWLLNN 33 (845)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~ 33 (845)
|||+++|++.+.++.-++
T Consensus 1 ggggggggaashqrvtpd 18 (29)
T 1cn3_F 1 GGGGGGGGAASHQRVTPD 18 (29)
T ss_dssp CCCCCCSTTTCCCCCEEG
T ss_pred CCCCCCCccccccccCch
Confidence 455555666665554443
No 244
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=31.67 E-value=25 Score=34.87 Aligned_cols=57 Identities=16% Similarity=0.059 Sum_probs=45.1
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+.+++-.|++++- =...+-+...+++++|++.|+++.+.||=+...+..+.+++|++
T Consensus 6 kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 62 (274)
T 3fzq_A 6 KLLILDIDGTLRD---EVYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVD 62 (274)
T ss_dssp CEEEECSBTTTBB---TTTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCS
T ss_pred eEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence 4566666777642 12357899999999999999999999999998888888877763
No 245
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=31.29 E-value=1.6e+02 Score=23.39 Aligned_cols=88 Identities=14% Similarity=0.216 Sum_probs=52.9
Q ss_pred eEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCCcceeEEEEecccchhhhHHHHhhhccCCCceEEE------------
Q 003131 167 LGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQVTGVLCELDAHFLEGILSNFKGVRQFR------------ 234 (845)
Q Consensus 167 ~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~------------ 234 (845)
.+.+.|..+..+.+++.+.|++.||++....++ ......||+.+.+.+...-+.
T Consensus 3 ivivvfstdeetlrkfkdiikkngfkvrtvrsp--------------qelkdsieelvkkynativvvvvddkewaekai 68 (134)
T 2l69_A 3 IVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSP--------------QELKDSIEELVKKYNATIVVVVVDDKEWAEKAI 68 (134)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCEEEEECSH--------------HHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHHhcCceEEEecCH--------------HHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHH
Confidence 345566555556778888999999998765432 112233444444433221111
Q ss_pred ---eecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcceEe
Q 003131 235 ---FDKISGELEVLFDPEALSSRSLVDGIAGRSNGKFQIR 271 (845)
Q Consensus 235 ---v~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~~~~ 271 (845)
-++..+.+.+-||..+-..++....+.+.| |...
T Consensus 69 rfvkslgaqvliiiydqdqnrleefsrevrrrg---fevr 105 (134)
T 2l69_A 69 RFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRG---FEVR 105 (134)
T ss_dssp HHHHHHCCCCEEEEECSCHHHHHHHHHHHHHTT---CCEE
T ss_pred HHHHhcCCeEEEEEEeCchhHHHHHHHHHHhcC---ceEE
Confidence 123456788889988766777777788877 6554
No 246
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=31.23 E-value=79 Score=29.49 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=42.7
Q ss_pred cCCCceEEEEEeCCCCchhhHHHHHHhhhCC--CCceEEEEEeecc-------------------------EEEEEECCC
Q 003131 41 IGDGMRRIQVGVTGMTCAACSNSVEGALMGL--KGVAKASVALLQN-------------------------KADVVFDPD 93 (845)
Q Consensus 41 ~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~--~gv~~~~v~~~~~-------------------------~~~v~~~~~ 93 (845)
..+++.++.| + ++|=|-+|..+.++ +||.++.+-+..+ .+.|.||+.
T Consensus 15 ~p~~~~~a~f---a---gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~ 88 (187)
T 3pim_A 15 DPAKDKLITL---A---CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPK 88 (187)
T ss_dssp CTTTCEEEEE---E---SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTT
T ss_pred CCCCCcEEEE---e---cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCc
Confidence 3344555554 2 56888888888888 8999998876555 266778888
Q ss_pred CCCHHHHHHHHHh
Q 003131 94 LVKDEDIKNAIED 106 (845)
Q Consensus 94 ~~~~~~i~~~i~~ 106 (845)
.++.+++.+..=+
T Consensus 89 ~isy~~LL~~Ff~ 101 (187)
T 3pim_A 89 VITLRELTDFFFR 101 (187)
T ss_dssp TSCHHHHHHHHTT
T ss_pred cCCHHHHHHHHHH
Confidence 8888888776543
No 247
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=31.07 E-value=1.1e+02 Score=24.54 Aligned_cols=66 Identities=20% Similarity=0.338 Sum_probs=46.1
Q ss_pred ccccCCccchhhHHHHHHHhcCCC--CeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeeeccCCcceeEEEE
Q 003131 131 QYTIGGMTCAACVNSVEGILRGLP--GVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFVQSSGQDKILLQV 208 (845)
Q Consensus 131 ~~~v~gm~C~~C~~~ie~~l~~~~--GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~v 208 (845)
.+...|+.|+.-.-+..++|++++ | ..+.|..|.. ...++|.+.+++.||+...... +.+..++.|
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~-~a~~dI~~~~~~~G~~v~~~~~-~~g~~~i~I 70 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDND-ISRQNLQKMAEGMGYQSEYLEK-DNGVIEVTI 70 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSH-HHHHHHHHHHHHHTCEEEEEEC-GGGCEEEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEe-cCCEEEEEE
Confidence 356779999999999999999873 4 2334444432 4578999999999999865432 234455555
No 248
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=30.87 E-value=34 Score=33.67 Aligned_cols=49 Identities=14% Similarity=0.069 Sum_probs=38.0
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHA 836 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~ 836 (845)
+.+++-.|++++- -...+-+++.++|++|++.|+++++.||=.......
T Consensus 5 kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~ 53 (246)
T 3f9r_A 5 VLLLFDVDGTLTP---PRLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVE 53 (246)
T ss_dssp EEEEECSBTTTBS---TTSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred eEEEEeCcCCcCC---CCCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
Confidence 4556666777642 234688999999999999999999999998876443
No 249
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=30.53 E-value=50 Score=26.98 Aligned_cols=68 Identities=15% Similarity=-0.052 Sum_probs=48.5
Q ss_pred eeeeccccCCccchhhHHHHHHHhcCCCCeeeEE-----eecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceee
Q 003131 127 TIVGQYTIGGMTCAACVNSVEGILRGLPGVKRAV-----VALATSLGEVEYDPTVISKDDIANAIEDAGFEASF 195 (845)
Q Consensus 127 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~-----v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 195 (845)
.+++.+.+-..+-++ .-.+-+.|.+++||..+. ++..+..+.++.....++.++|.++|+++|-.++-
T Consensus 6 iRRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHS 78 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHS 78 (100)
T ss_dssp EEEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEE
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence 344455544443333 455677889999988765 45667777777777778999999999999988764
No 250
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=29.31 E-value=40 Score=32.25 Aligned_cols=34 Identities=9% Similarity=-0.101 Sum_probs=30.3
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVA 838 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA 838 (845)
++.|++.++++.|++. +++.++|+.+...+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4679999999999998 999999999998887666
No 251
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=29.31 E-value=37 Score=33.18 Aligned_cols=53 Identities=15% Similarity=0.233 Sum_probs=41.0
Q ss_pred cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131 783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
..+.+++-.|++++.- ...+-++++++|++|++. +++++.||=.... +.++++
T Consensus 5 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~---~~~~l~ 57 (246)
T 2amy_A 5 GPALCLFDVDGTLTAP---RQKITKEMDDFLQKLRQK-IKIGVVGGSDFEK---VQEQLG 57 (246)
T ss_dssp CSEEEEEESBTTTBCT---TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHH---HHHHHC
T ss_pred CceEEEEECCCCcCCC---CcccCHHHHHHHHHHHhC-CeEEEEcCCCHHH---HHHHhc
Confidence 3567777888888641 345789999999999999 9999999987653 455555
No 252
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=29.09 E-value=1.5e+02 Score=23.31 Aligned_cols=56 Identities=13% Similarity=0.118 Sum_probs=42.4
Q ss_pred EEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 48 IQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 48 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
..+...|+.|+.-.-...+++.+++. .+...+..++. ...+.+...++..||....
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~-~a~~di~~~~~~~G~~~~~ 66 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDP-ATTRDIPGFCTFMEHELVA 66 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCT-THHHHHHHHHHHTTCEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEE
Confidence 45889999999999999999998742 23455555544 4467888889999998743
No 253
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=28.20 E-value=45 Score=28.84 Aligned_cols=15 Identities=33% Similarity=0.426 Sum_probs=8.9
Q ss_pred HHHHHHHHhCCCeEE
Q 003131 810 AVVVEGLLKMGVRPV 824 (845)
Q Consensus 810 ~~~I~~L~~~gi~v~ 824 (845)
.++.+.++++|++++
T Consensus 95 ~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 95 EELEEILSENGIEPV 109 (122)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 356666666666643
No 254
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=28.15 E-value=35 Score=33.33 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=39.7
Q ss_pred EEEEEECCeEEEEEEe--eCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003131 786 GILVAYDDNLIGVMGI--ADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE 840 (845)
Q Consensus 786 ~l~va~~~~~lG~~~~--~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~ 840 (845)
.+++-.|++++..-.= .-.+-+.+.++|++|++.| ++++.||=....+..+.++
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~ 58 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPL 58 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCS
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhcc
Confidence 3455556666642110 1257789999999999999 9999999999888777654
No 255
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=28.15 E-value=47 Score=32.00 Aligned_cols=39 Identities=5% Similarity=-0.088 Sum_probs=35.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
++.+++.+.++.|++. +++.++|+........+.+.+|+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~ 154 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGI 154 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTC
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCC
Confidence 5679999999999996 99999999999999888888886
No 256
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=27.97 E-value=1.6e+02 Score=24.12 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=42.7
Q ss_pred EEEEEeCCCCchhhHHHHHHhhhCCCCceEEEEEeeccEEEEEECCCCCCHHHHHHHHHhcCcchhh
Q 003131 47 RIQVGVTGMTCAACSNSVEGALMGLKGVAKASVALLQNKADVVFDPDLVKDEDIKNAIEDAGFEAEI 113 (845)
Q Consensus 47 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 113 (845)
...+...|+.|+.-.-...+++.+++. .+...|..++. ...+.+...++..||....
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~~ 83 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGYTVLD 83 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTCSEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCCEEEE
Confidence 356899999999999999999998743 23455555544 3456788889999998743
No 257
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=27.93 E-value=17 Score=36.11 Aligned_cols=52 Identities=13% Similarity=0.236 Sum_probs=38.2
Q ss_pred EEEEECCeEEEEEEeeCC-CChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131 787 ILVAYDDNLIGVMGIADP-VKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 787 l~va~~~~~lG~~~~~D~-lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
+++-.|++++- -+.. +.+.++++|++|++.|+++++.||=+ ..+..+.+++|
T Consensus 5 i~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~ 57 (261)
T 2rbk_A 5 LFFDIDGTLVS---FETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ 57 (261)
T ss_dssp EEECSBTTTBC---TTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred EEEeCCCCCcC---CCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence 44444555443 2445 78999999999999999999999988 66655555554
No 258
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=27.48 E-value=90 Score=25.52 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=46.2
Q ss_pred ceeEEEEecccchhhhHHHHhhhccCCCceEEEe-----ecCCCeEEEEeCCCCCChhhHHHhhhhcCCCcc
Q 003131 202 DKILLQVTGVLCELDAHFLEGILSNFKGVRQFRF-----DKISGELEVLFDPEALSSRSLVDGIAGRSNGKF 268 (845)
Q Consensus 202 ~~~~~~v~gm~c~~c~~~ie~~l~~~~gV~~~~v-----~~~~~~~~V~~d~~~~~~~~i~~~i~~~g~~~~ 268 (845)
+|+.+.+-.. ...-.-.+.+.+.+++||..+++ +..+..+.|+-....++-+++.+.|++.|....
T Consensus 7 RRlVLDVlKP-h~P~ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIH 77 (100)
T 3bpd_A 7 RRLVLDVLKP-HEPKTIVFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIH 77 (100)
T ss_dssp EEEEEEEEEE-SCSCHHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEE
T ss_pred eEEEEEecCC-CCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEE
Confidence 3444555422 22333456677888899887764 456788888888888999999999999984443
No 259
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=26.26 E-value=1.3e+02 Score=26.35 Aligned_cols=48 Identities=13% Similarity=0.016 Sum_probs=37.7
Q ss_pred EEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCC
Q 003131 796 IGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCV 843 (845)
Q Consensus 796 lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI 843 (845)
+-++.+.|..++-+.++-++|+++|+++-|.. ++...-.+.=|+.-++
T Consensus 11 v~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kv 61 (130)
T 1v95_A 11 CSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGS 61 (130)
T ss_dssp EEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTC
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCC
Confidence 45677889999999999999999999998765 5666666666665554
No 260
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=26.16 E-value=48 Score=31.51 Aligned_cols=38 Identities=11% Similarity=0.094 Sum_probs=31.7
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
++.+++.++++.|++ |+++.++|+........+.+.++
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~ 136 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLG 136 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTC
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcC
Confidence 678999999999999 89999999988877776655443
No 261
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=26.08 E-value=1.5e+02 Score=26.24 Aligned_cols=21 Identities=14% Similarity=-0.108 Sum_probs=18.2
Q ss_pred eeEEeecCCcCCCCEEEEcCC
Q 003131 450 EEREIDALLIQSGDTLKVLPG 470 (845)
Q Consensus 450 ~~~~i~~~~l~~GDii~v~~G 470 (845)
....+.+++|++||.|.+..|
T Consensus 83 ~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 83 KLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp EEEEEEGGGCCTTCEEEEECT
T ss_pred cEEEEEHHHCcCCCEEEEecC
Confidence 346799999999999998887
No 262
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=25.98 E-value=31 Score=33.01 Aligned_cols=28 Identities=21% Similarity=0.184 Sum_probs=24.8
Q ss_pred CChhHHHHHHHHHhCCCeEEEEcCCCHH
Q 003131 805 VKREAAVVVEGLLKMGVRPVMVTGDNWR 832 (845)
Q Consensus 805 lr~~~~~~I~~L~~~gi~v~mlTGD~~~ 832 (845)
+.+++.+.++.|++.|+++.++|+-...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4779999999999999999999998643
No 263
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=25.53 E-value=74 Score=30.98 Aligned_cols=61 Identities=10% Similarity=0.020 Sum_probs=45.3
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI~ 844 (845)
.+.+++-.|++++---.-.+.+-++..++++.|++.|+++.++| |-.........+++|+.
T Consensus 12 ~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp CCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 46677777888753100012256788999999999999999999 99888888887787763
No 264
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=24.23 E-value=1.9e+02 Score=23.71 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=41.8
Q ss_pred eccccCCccchhhHHHHHHHhcCCCCeeeEEeecCCCeEEEEeCCCCCCHHHHHHHHHhcCCceeee
Q 003131 130 GQYTIGGMTCAACVNSVEGILRGLPGVKRAVVALATSLGEVEYDPTVISKDDIANAIEDAGFEASFV 196 (845)
Q Consensus 130 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 196 (845)
..+...|..|+.-.-+..++|++++. .+.+.|..|.. ...++|.+.++..||+....
T Consensus 28 ~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 28 YRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCP-QSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCS-SSSCHHHHHHHHHTCSEEEE
T ss_pred eEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-chHHHHHHHHHHCCCEEEEE
Confidence 46889999999999999999998742 12333444332 34678999999999998653
No 265
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=23.88 E-value=53 Score=30.75 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=21.1
Q ss_pred eeEEeecCCcCCCCEEEEcCCCccCcc
Q 003131 450 EEREIDALLIQSGDTLKVLPGTKLPAD 476 (845)
Q Consensus 450 ~~~~i~~~~l~~GDii~v~~G~~vPaD 476 (845)
+...+++++|++||.|.+..|..++.|
T Consensus 112 ~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 112 EVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp EEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred eEEEEEhhcCCCCCEEEecccCCccce
Confidence 456789999999999999876555543
No 266
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=23.71 E-value=41 Score=34.14 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=44.9
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChh-HHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKRE-AAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~-~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+++-.|++++- -...+-+. ..++|++|++.|+.+++.||=....+..+.+++|+
T Consensus 37 iKli~fDlDGTLld---~~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 94 (304)
T 3l7y_A 37 VKVIATDMDGTFLN---SKGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHE 94 (304)
T ss_dssp CSEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGG
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 46677888888752 12345566 78999999999999999999999998887776654
No 267
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=23.51 E-value=93 Score=28.26 Aligned_cols=54 Identities=11% Similarity=-0.024 Sum_probs=29.3
Q ss_pred hhHHHHHHHHHccC-eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCe--EEEEcCCCHHHHHHHHHHcCC
Q 003131 771 HVESFVVELEESAR-TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVR--PVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 771 ~~~~~~~~~~~~g~-~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~--v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+..+++.++|. .+++|+.|. ....-+.+++.|+. .-+++..+.. +++..|+
T Consensus 54 ~l~~~~~~~~~~gv~~vv~Is~d~---------------~~~~~~~~~~~~~~~~fp~l~D~~~~----~~~~~gv 110 (167)
T 2wfc_A 54 GYVEQAAAIHGKGVDIIACMAVND---------------SFVMDAWGKAHGADDKVQMLADPGGA----FTKAVDM 110 (167)
T ss_dssp HHHHTHHHHHHTTCCEEEEEESSC---------------HHHHHHHHHHTTCTTTSEEEECTTSH----HHHHTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCC---------------HHHHHHHHHhcCCCcceEEEECCCCc----HHHHcCC
Confidence 35555566676776 666665431 12333445566776 6677764443 4444443
No 268
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=23.09 E-value=85 Score=31.08 Aligned_cols=66 Identities=9% Similarity=0.074 Sum_probs=47.7
Q ss_pred HHHHHccCeEEEEEE--------------CCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003131 777 VELEESARTGILVAY--------------DDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVC 842 (845)
Q Consensus 777 ~~~~~~g~~~l~va~--------------~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~G 842 (845)
.-+...|+.++++.. +-..+|+-++..+-.+..+++++.|++.|.++.++=|-...+ ...++++|
T Consensus 145 ~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~-~~~~~~ig 223 (258)
T 2i2x_B 145 ALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVN-QDFVSQFA 223 (258)
T ss_dssp HHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCC-HHHHHTST
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCC-HHHHHHcC
Confidence 345778888888765 447899999888888999999999999998865444443333 33455555
Q ss_pred C
Q 003131 843 V 843 (845)
Q Consensus 843 I 843 (845)
-
T Consensus 224 a 224 (258)
T 2i2x_B 224 L 224 (258)
T ss_dssp T
T ss_pred C
Confidence 3
No 269
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=22.46 E-value=34 Score=31.49 Aligned_cols=25 Identities=32% Similarity=0.511 Sum_probs=18.8
Q ss_pred HHhhcCCcEEEecCCCccccCCeEE
Q 003131 641 LERAQKIKYVIFDKTGTLTQGRATV 665 (845)
Q Consensus 641 ~e~lg~v~~i~fDKTGTLT~~~~~v 665 (845)
-|++..++.|+||--||||.+...+
T Consensus 3 ~~~~~~ikliv~D~DGtL~d~~~~~ 27 (168)
T 3ewi_A 3 KEKLKEIKLLVCNIDGCLTNGHIYV 27 (168)
T ss_dssp ----CCCCEEEEECCCCCSCSCCBC
T ss_pred hhhHhcCcEEEEeCccceECCcEEE
Confidence 3678889999999999999987654
No 270
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=22.22 E-value=2.6e+02 Score=27.93 Aligned_cols=53 Identities=21% Similarity=0.389 Sum_probs=41.7
Q ss_pred ECCeEEEEEEee---CCCChhHHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCC
Q 003131 791 YDDNLIGVMGIA---DPVKREAAVVVEGLLKMGVRPVMV-TGDNWRTAHAVAREVCV 843 (845)
Q Consensus 791 ~~~~~lG~~~~~---D~lr~~~~~~I~~L~~~gi~v~ml-TGD~~~tA~~iA~~~GI 843 (845)
|+++.+|..++. +|--.+..+.++.+|+.+|+++.. +.-+..++..||++.|+
T Consensus 196 yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~ 252 (286)
T 3gi1_A 196 FGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGA 252 (286)
T ss_dssp TTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTC
T ss_pred CCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCC
Confidence 377888888773 344456778899999999998766 66678899999999986
No 271
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.81 E-value=1.1e+02 Score=27.65 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=37.1
Q ss_pred CCeEEEEEEeeCCCChhHHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHHHcCCC
Q 003131 792 DDNLIGVMGIADPVKREAAVVVEGLLKMGV-RP-VMVTGDNWRTAHAVAREVCVI 844 (845)
Q Consensus 792 ~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi-~v-~mlTGD~~~tA~~iA~~~GI~ 844 (845)
+-.++|+-.....-.+..+++++.||+.|. ++ +|+-|=....-...+++.|++
T Consensus 69 ~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d 123 (161)
T 2yxb_A 69 DVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIR 123 (161)
T ss_dssp TCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCC
T ss_pred CCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCc
Confidence 346788888888888999999999999986 33 455563332233346777764
No 272
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=21.65 E-value=57 Score=32.00 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=42.1
Q ss_pred CeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCC
Q 003131 784 RTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVARE----VCVI 844 (845)
Q Consensus 784 ~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~----~GI~ 844 (845)
.+.+.+-.|++++- .++.-+++.++++.|++.|+++.++||-...+...++++ +|+.
T Consensus 5 ~k~v~fDlDGTL~~----~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 5 YQGYLIDLDGTIYL----GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp CCEEEECCBTTTEE----TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCeEEe----CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34566666777653 343447899999999999999999999887766666654 6663
No 273
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=21.52 E-value=54 Score=32.44 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=39.1
Q ss_pred cCeEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 003131 783 ARTGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHA 836 (845)
Q Consensus 783 g~~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~ 836 (845)
..+.+++-.|++++. -...+-++++++|++|++. +++++.||=.......
T Consensus 12 ~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~ 61 (262)
T 2fue_A 12 ERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAE 61 (262)
T ss_dssp -CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHH
T ss_pred CeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHH
Confidence 356778888998864 1345789999999999999 9999999987765443
No 274
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=20.99 E-value=37 Score=30.03 Aligned_cols=21 Identities=14% Similarity=0.362 Sum_probs=17.7
Q ss_pred EEeecCCcCCCCEEEEcCCCc
Q 003131 452 REIDALLIQSGDTLKVLPGTK 472 (845)
Q Consensus 452 ~~i~~~~l~~GDii~v~~G~~ 472 (845)
..|+.++++|||+|..+.|..
T Consensus 61 ~~V~~~~l~pGDLvFf~~~~~ 81 (135)
T 2k1g_A 61 KSVSRSNLRTGDLVLFRAGST 81 (135)
T ss_dssp EEECGGGCCTTEEEEEEETTT
T ss_pred cEecHHHccCCcEEEECCCCC
Confidence 568899999999999987653
No 275
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=20.95 E-value=1e+02 Score=28.27 Aligned_cols=16 Identities=6% Similarity=-0.047 Sum_probs=7.4
Q ss_pred hHHHHHHHHHccCeEE
Q 003131 772 VESFVVELEESARTGI 787 (845)
Q Consensus 772 ~~~~~~~~~~~g~~~l 787 (845)
+.+..+++.+.|..++
T Consensus 67 l~~~~~~~~~~gv~vv 82 (173)
T 3mng_A 67 FVEQAEALKAKGVQVV 82 (173)
T ss_dssp HHHTHHHHHTTTCCEE
T ss_pred HHHHHHHHHhCCCEEE
Confidence 3444445555554443
No 276
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=20.78 E-value=1.4e+02 Score=27.58 Aligned_cols=30 Identities=20% Similarity=0.142 Sum_probs=14.3
Q ss_pred HHHHhCCC-eEEEEcCCCHHHHHHHHHHcCC
Q 003131 814 EGLLKMGV-RPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 814 ~~L~~~gi-~v~mlTGD~~~tA~~iA~~~GI 843 (845)
+++++.|+ +++-+|-|.+.+-.+.+++.|+
T Consensus 76 ~ef~~~g~d~VigIS~D~~~~~~~f~~~~~l 106 (176)
T 4f82_A 76 EQLRAAGIDEIWCVSVNDAFVMGAWGRDLHT 106 (176)
T ss_dssp HHHHHTTCCEEEEEESSCHHHHHHHHHHTTC
T ss_pred HHHHhCCCCEEEEEeCCCHHHHHHHHHHhCC
Confidence 34444455 4445555555444444444443
No 277
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=20.77 E-value=68 Score=30.93 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=34.1
Q ss_pred CCChhHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 003131 804 PVKREAAVVVEGLLKMGVRPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 804 ~lr~~~~~~I~~L~~~gi~v~mlTGD~~~tA~~iA~~~GI 843 (845)
++.+++.+.++.|++. +++.++|+........+.+.+|+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~ 158 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGL 158 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTC
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCC
Confidence 4578999999999985 99999999999888888888876
No 278
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=20.56 E-value=1.1e+02 Score=27.31 Aligned_cols=54 Identities=7% Similarity=-0.026 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHccCe-EEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCC
Q 003131 771 HVESFVVELEESART-GILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGV--RPVMVTGDNWRTAHAVAREVCV 843 (845)
Q Consensus 771 ~~~~~~~~~~~~g~~-~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi--~v~mlTGD~~~tA~~iA~~~GI 843 (845)
.+.+..+++.+.|.. +++|+.| + ....-+.+++.|+ ..-+++..+ ..+++..|+
T Consensus 58 ~l~~~~~~~~~~~v~~vv~Is~d-----------~----~~~~~~~~~~~~~~~~~~~l~D~~----~~~~~~~gv 114 (162)
T 1tp9_A 58 GFIEKAGELKSKGVTEILCISVN-----------D----PFVMKAWAKSYPENKHVKFLADGS----ATYTHALGL 114 (162)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESS-----------C----HHHHHHHHHTCTTCSSEEEEECTT----SHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCEEEEEECC-----------C----HHHHHHHHHhcCCCCCeEEEECCC----chHHHHcCc
Confidence 455666677777777 7666543 1 1233345566688 666776444 345566664
No 279
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=20.02 E-value=1.3e+02 Score=28.52 Aligned_cols=55 Identities=16% Similarity=0.218 Sum_probs=38.4
Q ss_pred eEEEEEECCeEEEEEEeeCCCChhHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCC
Q 003131 785 TGILVAYDDNLIGVMGIADPVKREAAVVVEGLLKMGVRPVMVT---GDNWRTAHAVAREVCV 843 (845)
Q Consensus 785 ~~l~va~~~~~lG~~~~~D~lr~~~~~~I~~L~~~gi~v~mlT---GD~~~tA~~iA~~~GI 843 (845)
+.+.+-.||+++- .++.-+++.++++.|++.|+++...| |-..........+.|+
T Consensus 4 k~i~fDlDGTLl~----~~~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~ 61 (250)
T 2c4n_A 4 KNVICDIDGVLMH----DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp CEEEEECBTTTEE----TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred cEEEEcCcceEEe----CCEeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCC
Confidence 4566666777653 22333445889999999999999999 7777666666556665
Done!