Your job contains 1 sequence.
>003132
MESMLEEQTFQVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITN
LCPLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVIC
LDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV
PQNSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMIGEEPNENF
QSMLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSL
GSSEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVDLHLGLSMSKSVA
DTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEIT
TKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVT
SDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELR
KEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKCEPVKQPAHLAVKVKKSMLEKGKV
RESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDLLRNNSQSSD
TEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPLKLS
SDNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKSNAALSKVHPIQLGDPKVNSLKGTA
TSDDVKVDKRKWALEILARKTAVACKSATHEKPEDTAMLKRNYPLLVCYTLLLLSPSLCV
WNWSV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003132
(845 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2123431 - symbol:AT4G10930 species:3702 "Arabi... 679 1.5e-72 2
TAIR|locus:2123446 - symbol:AT4G10940 "AT4G10940" species... 616 3.9e-60 1
TAIR|locus:2078092 - symbol:AT3G05670 "AT3G05670" species... 176 1.9e-09 1
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 96 1.4e-06 3
UNIPROTKB|E1BTQ2 - symbol:RNF8 "Uncharacterized protein" ... 103 6.6e-06 2
DICTYBASE|DDB_G0294609 - symbol:polD3 "DNA polymerase del... 137 2.2e-05 1
UNIPROTKB|F8W6K1 - symbol:SCAF11 "Protein SCAF11" species... 110 3.3e-05 1
DICTYBASE|DDB_G0281183 - symbol:DDB_G0281183 "RING zinc f... 135 6.6e-05 2
FB|FBgn0037344 - symbol:CG2926 species:7227 "Drosophila m... 143 9.5e-05 4
ZFIN|ZDB-GENE-041210-22 - symbol:scaf11 "SR-related CTD-a... 121 0.00020 3
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 102 0.00024 1
TAIR|locus:2037294 - symbol:AT1G74990 species:3702 "Arabi... 102 0.00024 1
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00025 3
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00025 3
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 96 0.00025 3
UNIPROTKB|F1PHI0 - symbol:TOPORS "Uncharacterized protein... 111 0.00032 3
POMBASE|SPCC162.08c - symbol:nup211 "nucleoporin nup211" ... 129 0.00051 1
DICTYBASE|DDB_G0271058 - symbol:vilC "villin-like protein... 128 0.00053 1
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 128 0.00074 3
UNIPROTKB|I3LHN2 - symbol:SCAF11 "Uncharacterized protein... 108 0.00076 3
TAIR|locus:2095833 - symbol:AT3G58030 species:3702 "Arabi... 120 0.00077 1
TAIR|locus:2016437 - symbol:AT1G19310 species:3702 "Arabi... 114 0.00088 1
>TAIR|locus:2123431 [details] [associations]
symbol:AT4G10930 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161518 EMBL:AF080118
EMBL:AL049525 PIR:T01884 EMBL:AY133683 IPI:IPI00543344
RefSeq:NP_567370.1 UniGene:At.33598 IntAct:Q8L7I1 STRING:Q8L7I1
PaxDb:Q8L7I1 PRIDE:Q8L7I1 EnsemblPlants:AT4G10930.1 GeneID:826692
KEGG:ath:AT4G10930 TAIR:At4g10930 eggNOG:NOG314269
HOGENOM:HOG000155314 InParanoid:Q8L7I1 OMA:KVRENLT PhylomeDB:Q8L7I1
ProtClustDB:CLSN2917529 Genevestigator:Q8L7I1 Uniprot:Q8L7I1
Length = 984
Score = 679 (244.1 bits), Expect = 1.5e-72, Sum P(2) = 1.5e-72
Identities = 155/293 (52%), Positives = 197/293 (67%)
Query: 467 HEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRP 526
H +S+ P + T DI SIVKGT + K L N D+SS + EN +GLRVKKI + P
Sbjct: 202 HHESR-SPSN-NTTVDIFSIVKGTGRR--KNLMRSNPTDKSS-EAENAAGLRVKKIKRTP 256
Query: 527 AEDKDSSELVQELRKEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKC-EPVKQPAH 585
++K+S LV++LRKEIREAVRN+S +D EN FDPKLLAAFRAA+AGPK E ++ +
Sbjct: 257 EDEKESMVLVEKLRKEIREAVRNKSMEDIRENQFDPKLLAAFRAAVAGPKTGEAPRRSSA 316
Query: 586 LAVKVKKSMLEKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTL 645
LAVK KK ML+KGKVRE+LTKKIY + NG+R+ AW+RDCEVEFWK+RC++ K EKI TL
Sbjct: 317 LAVKAKKLMLQKGKVRENLTKKIYADLNGKRKSAWHRDCEVEFWKHRCIQGRKPEKIETL 376
Query: 646 KSVLDLLRNNSQSSDTEQSTEC-QETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSE 704
KSVL LL+N + T S+E Q +NPILSRLYLADTSVFPR DN+ PL A K NS+
Sbjct: 377 KSVLSLLKNKPADTKTNFSSETPQASNPILSRLYLADTSVFPRNDNLKPLLAPKEMGNSQ 436
Query: 705 QS-KEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKS 756
+ K S P K+S A+K + SK+ + G N++ S S
Sbjct: 437 NNGKPTEASKTLP-KIS----AAKGSSVKAAGSKLNSGNKQSDGQPNLTSSNS 484
Score = 122 (48.0 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 44/142 (30%), Positives = 69/142 (48%)
Query: 682 TSVFPRKDNIMPLSALKATDNSEQSKEQAIS-MEKPLKLSSDNCASKVAETNKVSSKVGV 740
+S P+ N + LS L D S + + + P ++ + K E +K K+
Sbjct: 395 SSETPQASNPI-LSRLYLADTSVFPRNDNLKPLLAPKEMGNSQNNGKPTEASKTLPKI-- 451
Query: 741 LSAYEKGTRNMSCSKSNAALSKVHPIQLGDPKVNSLKGTATSDDVKVDKRKWALEILARK 800
SA + + + SK N+ +K Q NS + DD+K DKRKWAL++LARK
Sbjct: 452 -SAAKGSSVKAAGSKLNSG-NKQSDGQPNLTSSNSKEMVENPDDLKKDKRKWALQVLARK 509
Query: 801 TAVACKSATHEKPEDTAMLKRN 822
A+A ++T +K E + LK N
Sbjct: 510 KALAGNNSTQDK-EGSPELKGN 530
Score = 78 (32.5 bits), Expect = 1.5e-72, Sum P(2) = 1.5e-72
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 179 EVPQNSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMI-GEE 235
E ++S+ T+ + D S E N E+++ SV+VAD GETA+VVS++ G+E
Sbjct: 2 ETQPDTSLMETRKSLDIS--EKTNSGCSVEAVYSGNFSVTVADDGETALVVSIVKGDE 57
Score = 55 (24.4 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 33/142 (23%), Positives = 60/142 (42%)
Query: 400 SQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAEKLTQ-TNPHKDEANASILANSKKF 458
+ +I KR H +CSG + TK +++ E+ + T H + + S F
Sbjct: 158 ASVISLKRKHSDCSGDDGNSETKPEIYESLNELKLEEEEELTTVHHESRSPSNNTTVDIF 217
Query: 459 PTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLR 518
+++ G K+ + D +S+ + G + K K R+ +D E S +
Sbjct: 218 -SIVKGTGRRKNLMRSNPTDKSSEAENAA-GLRVKKIK---------RTPED-EKESMVL 265
Query: 519 VKKIMK--RPAEDKDSSELVQE 538
V+K+ K R A S E ++E
Sbjct: 266 VEKLRKEIREAVRNKSMEDIRE 287
>TAIR|locus:2123446 [details] [associations]
symbol:AT4G10940 "AT4G10940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 Prosite:PS00518 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
IPI:IPI00519012 RefSeq:NP_567371.1 UniGene:At.54267
ProteinModelPortal:F4JN66 SMR:F4JN66 EnsemblPlants:AT4G10940.1
GeneID:826693 KEGG:ath:AT4G10940 OMA:DEDCCIE Uniprot:F4JN66
Length = 192
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 110/178 (61%), Positives = 135/178 (75%)
Query: 3 SMLEEQTFQVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLC 62
+++E++ +V++ N + E RCGICMD++IDRGVLDCCQHWFCF CIDNWSTI NLC
Sbjct: 9 NLVEDEAVEVEH--NGMTEIEGERCGICMDIIIDRGVLDCCQHWFCFECIDNWSTIMNLC 66
Query: 63 PLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYID------EN 116
PLCQ EFQLITCVPV+D+ S+ +D D +S ED IEE+++ +S PS+YID EN
Sbjct: 67 PLCQREFQLITCVPVFDSGESSKVDEDLVSGDEDCCIEEETDVVSSPSHYIDDTHYIDEN 126
Query: 117 AVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCP 174
AV+CLDGD CKIR+ E SNLDTSIACDSCD+WYHA CVGFD E EDTW+CP
Sbjct: 127 AVVCLDGDLCKIRNTFSYIEGDSNLDTSIACDSCDMWYHAICVGFDVENASEDTWVCP 184
>TAIR|locus:2078092 [details] [associations]
symbol:AT3G05670 "AT3G05670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AC011620 HSSP:Q14839
eggNOG:NOG300312 EMBL:AY120751 EMBL:BT002568 IPI:IPI00528739
RefSeq:NP_187218.1 UniGene:At.18633 ProteinModelPortal:Q9M9X2
SMR:Q9M9X2 EnsemblPlants:AT3G05670.1 GeneID:819734
KEGG:ath:AT3G05670 TAIR:At3g05670 HOGENOM:HOG000093083
InParanoid:Q9M9X2 OMA:CKQRFRT ProtClustDB:CLSN2684496
Genevestigator:Q9M9X2 Uniprot:Q9M9X2
Length = 883
Score = 176 (67.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 52/168 (30%), Positives = 74/168 (44%)
Query: 11 QVDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70
+V+ + D++ CG C D+ +G LDCC H+FCF CI WS + + CPLC+ F+
Sbjct: 400 KVELVKRDVIKNVCGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFR 459
Query: 71 LITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYID--ENAVICLDGDGCKI 128
I+ P T G + + D + L Y+D EN +IC + C
Sbjct: 460 TIS-KPARSTPGVDLREVVIPVPERDQVYQPTEEELRS---YLDPYEN-IICTE---C-- 509
Query: 129 RSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRC 176
G + L + CD CD H +CVG E E W C C
Sbjct: 510 HQG-----DDDGL--MLLCDLCDSSAHTYCVGLGRE-VPEGNWYCEGC 549
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 96 (38.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 36/137 (26%), Positives = 56/137 (40%)
Query: 73 TCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDGDGCKIRSGS 132
+C PV D I NNI L + I+ K+ + P +E + LD C+I G
Sbjct: 138 SC-PV-DRIVFNNI---ILRKCHGGKIQ-KTIAVKKPVKPAEEQVEVDLDQTSCEICGGR 191
Query: 133 MVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA--------EVPQNS 184
D + CD CD YH C+ + + W CP C+A ++ +
Sbjct: 192 ------DREDRLLLCDGCDAGYHMECLTPPLDAVPVEEWFCPECIANNRTSGSEQISEEE 245
Query: 185 SIDLTQSTNDQSGPENA 201
S L +++ +S P A
Sbjct: 246 SSSLPTTSHSRSRPTRA 262
Score = 88 (36.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 26 RCGICMDVVIDRGVL--DCCQHWFCFACIDNWSTITNLCPL 64
+C IC++ ++ V + C+H+FC CI WS N CP+
Sbjct: 101 KCPICLNSFHEQPVATPETCEHYFCLDCILEWSKNANSCPV 141
Score = 71 (30.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 77/371 (20%), Positives = 148/371 (39%)
Query: 267 ESNERTDIQSMLQAQEPELSFSQDASFCLPST--SLGSSEVKTDSADEKLNEQSSCG--G 322
+S +D ++ +SF++ + P++ +LGSS +KT +SSC
Sbjct: 899 QSPHHSDPMNIPVPSGASVSFTKCETMLEPTSCETLGSSFLKTQECT-----RSSCTDRN 953
Query: 323 VKSFLG-KTFNEPYPGNKPSDCISNVDLHLGLSMSKSVADTNKYLTE-DQITGYVQQQNP 380
VKS L K EP P +P + L LS + + N E ++G + N
Sbjct: 954 VKSELNFKIEAEPTP-IRPQ----SKSLEESLSNLQQTSQHNLVCKELPSVSGVLNATNI 1008
Query: 381 S---EESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAE-K 436
S EE H++ + N Q K H +KE + ++ R++ K
Sbjct: 1009 SVDREEKSHQSQSKDNKQSPSNCQSFHYKDCHKTKHSRSKEKRRSRSRSRDRRRSRSKSK 1068
Query: 437 LTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPK 496
Q + K+ + + + K+ + + R K + + SD + K +
Sbjct: 1069 ERQRSRSKERKH--VHSRDKRCSSSSSRERSTSGK---KVICERSDNRGRERQRKRPKER 1123
Query: 497 GLAHKNSADRS-SKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKDC 555
+ +S RS S++R+++S + KR + S+ ++ R++ +R K
Sbjct: 1124 RYSRSHSYSRSRSRERKSMSKCQGDSRSKRQKSELRSTSRERKKREDQLGKSLHRE-KSF 1182
Query: 556 DENLFDPKLLAAFRAAIAGPKC-EPVKQPAHLAVKVKKSMLEKGKVRESLTKKIYGNSNG 614
E++ +P + A++ K E VK + ++ M K ++E L + S+G
Sbjct: 1183 QESI-EPMSIELHEASVGANKTTESVKMERDARLCDREIMCIKPSIKE-LEPRSMNKSHG 1240
Query: 615 ---RRRRAWNR 622
+ W+R
Sbjct: 1241 LGSSKHGDWSR 1251
Score = 55 (24.4 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 24/71 (33%), Positives = 32/71 (45%)
Query: 261 DRNAKSESN-----ERTDIQSMLQAQEPELSFSQDAS----FC--LPSTS--LGSSEVKT 307
DRN KSE N E T I+ ++ E LS Q S C LPS S L ++ +
Sbjct: 951 DRNVKSELNFKIEAEPTPIRPQSKSLEESLSNLQQTSQHNLVCKELPSVSGVLNATNISV 1010
Query: 308 DSADEKLNEQS 318
D ++ QS
Sbjct: 1011 DREEKSHQSQS 1021
Score = 48 (22.0 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 588 VKVKKSMLEKGKVRESLTKKIYGNSNGRRRRA 619
VK +K + + K+R L K NS GR R+
Sbjct: 355 VKRRKRKVRRSKLRRKLVVKKETNSRGRIARS 386
Score = 44 (20.5 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 265 KSESNERTDIQSMLQAQEPELSFSQDASFCLPST-SLGSSEVKTDSA 310
K E+N R I L ++PE S S S PS SLGS + +A
Sbjct: 374 KKETNSRGRIARSLGIKKPE-SGSIIPSVYRPSEYSLGSMRAEIGAA 419
>UNIPROTKB|E1BTQ2 [details] [associations]
symbol:RNF8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017335 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00400000022349
PANTHER:PTHR15067:SF3 OMA:VEMKEHR EMBL:AADN02011899 IPI:IPI00820679
Ensembl:ENSGALT00000035395 Uniprot:E1BTQ2
Length = 136
Score = 103 (41.3 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 17 NDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCVP 76
ND+L E +C IC + I+ L+C H FC CID W+ CP+C+ E + T
Sbjct: 2 NDVLENEL-QCTICSEHFIEAVTLNCA-HSFCSYCIDEWTKRKVECPICRQEIKSKTRSL 59
Query: 77 VYD 79
V D
Sbjct: 60 VLD 62
Score = 37 (18.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 681 DTSVFPRKDNIMPLSALKATDNSE 704
D+S+ P +I+ +S+ + D+ E
Sbjct: 102 DSSIIPSIYSILSISSCDSEDSEE 125
>DICTYBASE|DDB_G0294609 [details] [associations]
symbol:polD3 "DNA polymerase delta subunit 3"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0043625 "delta DNA polymerase complex" evidence=ISS]
InterPro:IPR019038 Pfam:PF09507 dictyBase:DDB_G0294609
GO:GO:0006260 EMBL:AAFI02000032 GO:GO:0043625 KO:K03504
RefSeq:XP_001732994.1 EnsemblProtists:DDB0233631 GeneID:8622184
KEGG:ddi:DDB_G0294609 OMA:WEEDEVP Uniprot:B0G131
Length = 697
Score = 137 (53.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 104/515 (20%), Positives = 189/515 (36%)
Query: 248 KGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSSEVKT 307
+G N F+ D KS + + + SM EP+ S S T+ S + T
Sbjct: 194 QGSLNSFFSKTADD--GKSGNEAKVSLFSMFTKDEPK---SSTPSVKKEDTTKKSKNIST 248
Query: 308 DSADEK--LNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVDLHLGLSMSKSVADTNKY 365
S+ K ++ G + S + K S+ S D+ L S K
Sbjct: 249 SSSSSKKAAAKKKDSGSINSIIKKKKRSSSDSEDESEN-SEDDIKL-----PSYKRNKKI 302
Query: 366 LTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVT 425
+ D + EE E ++ P + Q+ + DN S E KK
Sbjct: 303 IHNDS------DDSDKEEEEEEEEEKGPSFISKKRQLSSSSDSEDNHSDNESEQNIKKQK 356
Query: 426 EVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVTS-DIM 484
+++ E+L + K E ++ + +K KL EK++ +
Sbjct: 357 LEKEQQLEKERLEKEKKEKLEKEKKEKLEKERLEKEKL-EKEKKEKLEKEKLEKERLEKE 415
Query: 485 SIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVK-KIMKRPAEDKDSSELVQELRKEI 543
+ K K KL K K +R K++EN+ L+ K K + K+ + V+E KE+
Sbjct: 416 KLEKEKKEKLEKEKKEKEEKERLKKEKENLEKLKSKSKSPSKETSKKEKTIFVKEEEKEV 475
Query: 544 REAVRNRSSKDCDENLFDPKLLAAFRAAIAGPKCEPVKQPAHLAVKVKKSMLEKGKVRES 603
++ + K E + + I P+ P + S K +++
Sbjct: 476 KKEKEEKEVKKEKEEKEEEEEEEVIEKPIKKKSSTPIPTPTKSSQNKSSSTPTKSPIQKK 535
Query: 604 LTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDLLRNNSQSS-DTE 662
K I + + ++ E E + +K + K K++++ + + + E
Sbjct: 536 --KSIIKQESDEEMKDQEQEDEEE-QEEEVIKTKRPVKKN--KTIVESSDDEEEKEKEKE 590
Query: 663 QSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPL-KLSS 721
+ E Q +P LS+ +S+ ++ A AT + KE+ + EK +
Sbjct: 591 KEKEKQVKSPKLSKNATITSSIVKPAAPVVKQRA--ATSPKSKVKEEPVKKEKDEDQEEK 648
Query: 722 DNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKS 756
+ VAE K SK S+ +K T + S K+
Sbjct: 649 EEEEEPVAE-KKTKSK----SSPKKPTASKSKKKA 678
>UNIPROTKB|F8W6K1 [details] [associations]
symbol:SCAF11 "Protein SCAF11" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC000015 HGNC:HGNC:10784 ChiTaRS:SCAF11
EMBL:AC084878 IPI:IPI00852713 ProteinModelPortal:F8W6K1 SMR:F8W6K1
Ensembl:ENST00000266589 ArrayExpress:F8W6K1 Bgee:F8W6K1
Uniprot:F8W6K1
Length = 118
Score = 110 (43.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 13 DNT-ENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEF 69
DNT LL E RC IC++ ++++ G + C H FC CI W+ CP+ + F
Sbjct: 42 DNTISTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPF 101
Query: 70 QLI 72
Q +
Sbjct: 102 QAV 104
>DICTYBASE|DDB_G0281183 [details] [associations]
symbol:DDB_G0281183 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002483
Pfam:PF01480 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0281183 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000040 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG244178
RefSeq:XP_640869.1 ProteinModelPortal:Q54UA7
EnsemblProtists:DDB0233761 GeneID:8622925 KEGG:ddi:DDB_G0281183
InParanoid:Q54UA7 OMA:PWIKREL Uniprot:Q54UA7
Length = 548
Score = 135 (52.6 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 2 ESMLEEQTFQVDNTENDL-LNFEC--GRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI 58
E+ +EE+ + D+ E D L C C IC+ + LD C H FCF CI WS +
Sbjct: 72 ENEIEEEEYNNDDEEVDKPLKLICEDSTCSICLSPFENLTFLDICFHQFCFVCILQWSEL 131
Query: 59 TNLCPLCQGEF 69
CPLC+ E+
Sbjct: 132 NQRCPLCKSEY 142
Score = 43 (20.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 19/101 (18%), Positives = 43/101 (42%)
Query: 183 NSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMIGEEPNENFQS 242
N++ + + N+++ EN N + ES+ P + ++ + S + E +
Sbjct: 360 NNNNNNNNNNNNENNNENNNKNGNEESMEPLSQILQQTNS-PIKHIPSFLSNILTEEIEK 418
Query: 243 MLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEP 283
IEK N +R + ++ +I+ +L+ +EP
Sbjct: 419 QELIEK---ERIENDIQSERKRIIQIDQEENIRKILRLKEP 456
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 143 (55.4 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 58/204 (28%), Positives = 81/204 (39%)
Query: 10 FQVDNTENDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQG 67
F D + NDLL +C IC+ + G C+H FC ACID WS CP+ +
Sbjct: 142 FSSDISSNDLLE----KCPICLLTFRQQEIGTPATCEHIFCAACIDAWSRNVQTCPIDRI 197
Query: 68 EFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLSFPSYYIDENAVICLDGDGCK 127
EF I V D+ S + + D S KSNT D A+ + C+
Sbjct: 198 EFDRII---VRDSYASRRVVREVRL---DLS---KSNTELVVDDEADTAALSEEEVTNCE 248
Query: 128 IRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA--EVPQNSS 185
I E D + CDSC+ YH C+ +W C C+ + N
Sbjct: 249 I------CESPDREDVMLLCDSCNQGYHMDCLDPPLYEIPAGSWYCDNCIDSDDEDDNEQ 302
Query: 186 IDLTQSTNDQSGPENANGDHLAES 209
++L DQ E+ G L E+
Sbjct: 303 LELADDL-DQLY-EDIRGMGLPET 324
Score = 64 (27.6 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 21/100 (21%), Positives = 50/100 (50%)
Query: 464 GRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIM 523
G +++ CP + + ++ + +P G+ H AD S KD ++++ + ++
Sbjct: 817 GNQNDDVDNCPNFSIYSQESQAVANASA--MPSGVPH-GPADASDKDDDDMN----EDLV 869
Query: 524 KRPAEDKDSSELVQELRKEIREAVRNRSSKDCDENLFDPK 563
+ +D+D+ ++ L E E V + K D++L++P+
Sbjct: 870 QLDDDDEDT-DIPLPLGPE-PEPVPEKVPKSSDDDLYEPE 907
Score = 58 (25.5 bits), Expect = 0.00064, Sum P(5) = 0.00064
Identities = 67/291 (23%), Positives = 112/291 (38%)
Query: 265 KSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSSEVKTDSADEKLNEQSSCGGVK 324
KSES++ S +QA PE + +++A + S S VK D A ++ +++ GV
Sbjct: 930 KSESSDHEPSNSNVQAAAPEENDAEEAR----TRSTPSPLVKEDRAADR--DRAK--GVL 981
Query: 325 SFLGKTFNEPYPGNKPSDCISNVDLHLGLSMSKSVADTNKYLTEDQITGYVQQQNPSEES 384
+ E +KP + + +S A + + ++ T + N S S
Sbjct: 982 ELYDDSDWEELDIDKPKEFEKALLTETEAQVSPKRAPSKRPPSKKD-TSLERDVNESG-S 1039
Query: 385 LHEADK-IEPGAKEEN--SQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAEKLTQTN 441
HE D+ P E+N + G + +N S K ++K V + EK T+
Sbjct: 1040 EHEQDRSYTPCLDEKNLAEEEEAGTTHQNNVSTSPKTRSSK----VSGDEDEPEKAVGTD 1095
Query: 442 -PHKDEANASILANSKKFPTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAH 500
+DE N + + A + +KSK K + + K K + +G
Sbjct: 1096 IQSEDELNNENESPRRSRSRGTANNKKDKSK-SRSKRNKGETFKKVGKRQKDRNYRG--D 1152
Query: 501 KNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRS 551
K+ DRS R + L K K P K S R + +RS
Sbjct: 1153 KSEPDRSP--RPDSRSLTPKMRSKSPRVSKSISRSRSGSRSRCKSKSFSRS 1201
Score = 42 (19.8 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 617 RRAWNRDCEVEFWKYRCMKATKTEKIGTLKSVLDL-LRNNSQSSDTEQSTE 666
RR RD + E + + KT ++G+L ++++ N +QS+ + E
Sbjct: 1750 RRERERDRDHELMRENGQRE-KTPQVGSLDAIMETSYENMTQSTGPKTPPE 1799
Score = 40 (19.1 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 675 SRLYLADTSVFPRKDNIMPLSALKATDNSEQSKEQAISMEKPLKLSSDNCASKVAETNKV 734
S LY+ PR S K+ + + K++ +K K + + + A ++
Sbjct: 1454 SSLYMGSPHYTPRISRSRSRSRSKSPKDMHKKKKKKSDKKKRRKRTGSSSPTTAARMRRI 1513
Query: 735 S 735
S
Sbjct: 1514 S 1514
Score = 37 (18.1 bits), Expect = 9.5e-05, Sum P(4) = 9.5e-05
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 249 GVGNEAFNPYGGDRNAKSES 268
G GN+ F+ G + N S
Sbjct: 690 GFGNQNFSSSGSNNNTNMSS 709
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(5) = 0.00018
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 660 DTEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSA 696
D T +T +LS + L +SV +I +S+
Sbjct: 2001 DNHDKTADGKTITVLSNVLLTSSSVVSSSQHIPSISS 2037
>ZFIN|ZDB-GENE-041210-22 [details] [associations]
symbol:scaf11 "SR-related CTD-associated factor 11"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-041210-22 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AL929171 IPI:IPI01024158
Ensembl:ENSDART00000148486 ArrayExpress:F8W5M3 Bgee:F8W5M3
Uniprot:F8W5M3
Length = 1145
Score = 121 (47.7 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 14 NTENDLLNFECGRCGICMDVV--IDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71
N+E+ L + E RC IC++ DR V DCC+H +C ACI W+ + CP+ + F +
Sbjct: 11 NSEDTLEDEESQRCPICLNRPRRSDRAVPDCCRHVYCSACILRWAQMVQSCPVDRRPFSV 70
Query: 72 I 72
I
Sbjct: 71 I 71
Score = 62 (26.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 46/205 (22%), Positives = 77/205 (37%)
Query: 257 PYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDASFCLPSTSLGSSEVKTDSADEKLNE 316
P G +R S ++ ++ +A S + S+S S + TD+ + LN+
Sbjct: 245 PKGEERKGTRGSGSKSSVKPA-EAPATRRSSRRSRGEAEDSSSAHSQQNDTDNTSQTLND 303
Query: 317 QSSCG----GVKSFLG-KTFNEP----YPGNKPSDCISNVDLHL--GLSMSKSVADTNKY 365
+S G G KT P + + + H G + S+ + T++
Sbjct: 304 TASTSRGQQGNNPRSGVKTRGRPKKLKVEKREDEEQEPEAENHKEDGAAESEE-SKTDQK 362
Query: 366 LTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVT 425
DQI G Q ++E + E ++ P EN N D + +E+ TK V
Sbjct: 363 ANSDQIDGG-QDPVDTKEKMEEENETSPS---ENKP--DDADNQDEETAEEEEVVTKNVV 416
Query: 426 EVPAKKIRAEKLTQTNPHKDEANAS 450
E R E +T + NAS
Sbjct: 417 EEDDNS-RQEVMTDDEDQVELMNAS 440
Score = 58 (25.5 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 37/164 (22%), Positives = 70/164 (42%)
Query: 164 EGTCEDTWLCPRCVAEVPQNSSIDLTQSTNDQ-----SGPE-NANGDHLAESLFPRKVSV 217
E T E+ + + V E NS ++ DQ + PE N + + SL P++
Sbjct: 402 EETAEEEEVVTKNVVEEDDNSRQEVMTDDEDQVELMNASPELNQDCSSPSRSLEPQESPS 461
Query: 218 SVADAGETAVVVSMIGEEPNENFQSMLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSM 277
DA + + E P + L+++ + + NP K +S+ D+Q +
Sbjct: 462 DSQDA-VLSFKEQLTAESPTDASDQDLDLKPELDSTEDNP------EKQDSSSFPDLQDI 514
Query: 278 LQAQ-EP---ELSFSQDASFCLPSTS-LGSSEVKTDSADEKLNE 316
+ EP E +++QD+S LP+ + + D+ +E N+
Sbjct: 515 ADPKPEPDTTEEAYTQDSSN-LPALQEIVDLIPEPDTTEEMANQ 557
Score = 56 (24.8 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 44/217 (20%), Positives = 85/217 (39%)
Query: 233 GEEPNENFQSMLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQDAS 292
G++P + + M E E P D N E+ E ++ + +E + S + +
Sbjct: 371 GQDPVDTKEKMEE-ENETSPSENKPDDAD-NQDEETAEEEEVVTKNVVEEDDNSRQEVMT 428
Query: 293 FCLPSTSL--GSSEVKTD--SADEKLNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVD 348
L S E+ D S L Q S + + +F E P+D S+ D
Sbjct: 429 DDEDQVELMNASPELNQDCSSPSRSLEPQESPSDSQDAV-LSFKEQLTAESPTDA-SDQD 486
Query: 349 LHLGLSMSKSVADTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRN 408
L L + + + K +D + + Q+ ++ E D E +++S + +
Sbjct: 487 LDLKPELDSTEDNPEK---QDS-SSFPDLQDIADPK-PEPDTTEEAYTQDSSNLPALQEI 541
Query: 409 HDNCSGINKEITTKKVTEVPAKKIRAEKLTQTNPHKD 445
D + T + + PA+KI + K ++T+ K+
Sbjct: 542 VDLIP--EPDTTEEMANQDPAEKIESSKESKTSDKKE 576
Score = 44 (20.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 501 KNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKDC 555
K AD S K++E ++ + + + A K + + + E +E VR K C
Sbjct: 1057 KAHADSSKKEKEKKLQIQERAVNEVKAAIKPYYQKNEINKDEYKEIVRKAVEKVC 1111
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 102 (41.0 bits), Expect = 0.00024, P = 0.00024
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 27 CGICMDVVIDRGVLDCCQHWFCFACIDNW-STITN--LCPLCQGEFQLITCVPVY 78
C IC+D D V+ C H FC+ C+ W T N +CP+C+ +P+Y
Sbjct: 4 CNICLDTAKD-AVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLY 57
>TAIR|locus:2037294 [details] [associations]
symbol:AT1G74990 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC008263 EMBL:AC013258
InterPro:IPR017907 HOGENOM:HOG000238304 EMBL:AY088830 EMBL:BT030642
IPI:IPI00531818 PIR:G96779 RefSeq:NP_177636.1 UniGene:At.34824
ProteinModelPortal:Q9S7D6 SMR:Q9S7D6 EnsemblPlants:AT1G74990.1
GeneID:843837 KEGG:ath:AT1G74990 TAIR:At1g74990 eggNOG:NOG241331
InParanoid:Q9S7D6 OMA:GCNICLE PhylomeDB:Q9S7D6
ProtClustDB:CLSN2914219 Genevestigator:Q9S7D6 Uniprot:Q9S7D6
Length = 137
Score = 102 (41.0 bits), Expect = 0.00024, P = 0.00024
Identities = 27/87 (31%), Positives = 46/87 (52%)
Query: 12 VDNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNW---STITNLCPLCQGE 68
+ N E+D N G C IC+++ + ++ C H FC+ C+ W + +N CP+C+
Sbjct: 6 ITNEEDDASN-NFG-CNICLELAREP-IVTLCGHLFCWPCLYKWLHYHSKSNHCPVCKAL 62
Query: 69 FQLITCVPVYDTIGSNNIDGDS-LSRG 94
+ T VP+Y +G + D S L+ G
Sbjct: 63 VKEDTLVPLYG-MGKPSSDPRSKLNSG 88
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 96 (38.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 104 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 153
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 184 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 228
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 343 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 400
Query: 545 EA 546
+
Sbjct: 401 SS 402
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 96 (38.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 107 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 156
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 187 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 231
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 346 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 403
Query: 545 EA 546
+
Sbjct: 404 SS 405
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 96 (38.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 27 CGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCV 75
C IC++ D+ G + C H+FC CI WS N CP+ + F+ I C+
Sbjct: 108 CPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCI-CI 157
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 134 VAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178
V S D + CD CD YH C+ + D W CP C A
Sbjct: 188 VCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAA 232
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 487 VKGTKCKLPKGLA--HKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSELVQELRKEIR 544
V G K K P G + K+SA RS K + V R KK+ K A + LR+ +
Sbjct: 347 VPGRK-KTPSGPSAKSKSSATRSKKRQHRVKKRRGKKV-KSEATTRSRIARTLGLRRPVH 404
Query: 545 EA 546
+
Sbjct: 405 SS 406
>UNIPROTKB|F1PHI0 [details] [associations]
symbol:TOPORS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0036064 "cilium basal body" evidence=IDA]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0036064 CTD:10210
GeneTree:ENSGT00530000064170 KO:K10631 OMA:DIINFRR
EMBL:AAEX03007933 EMBL:AAEX03007934 RefSeq:XP_003639434.1
Ensembl:ENSCAFT00000002842 GeneID:481577 KEGG:cfa:481577
Uniprot:F1PHI0
Length = 1043
Score = 111 (44.1 bits), Expect = 0.00033, Sum P(3) = 0.00032
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 26 RCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLI 72
+C IC+D + LD C H FCF C+ WS CPLC+ F I
Sbjct: 102 KCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 148
Score = 72 (30.4 bits), Expect = 0.00033, Sum P(3) = 0.00032
Identities = 65/292 (22%), Positives = 118/292 (40%)
Query: 286 SFSQDASF-C-LPSTSLGS---SEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNKP 340
+F Q A++ C PS GS S V T S DE ++ V + +++ PG P
Sbjct: 368 AFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDIN-VTTVSQAPWDDETPG--P 424
Query: 341 SDCISNVDLHLGLSMSKSVADTN-KYLTEDQITGYVQQQNPSEESLHEADK--------- 390
S S+ +H +S + +D++ + L + T +Q +E+ +++D
Sbjct: 425 SYS-SSEQVHAAMSSLLNTSDSSDEELVTGRATSQIQGVQTNEDLNNDSDSSSDNCVIVG 483
Query: 391 -IEPGAKEENSQIIGGKRNHDNCSGINKEITTKKVTEVPAKKIRAEKLTQTNPH----KD 445
++P A E +++ + + K + T K E ++ ++PH KD
Sbjct: 484 FVKPLA-ERTPELVELSSDSEELGSYEK-METVKTQEQSYSSGDSDVSRCSSPHSVLGKD 541
Query: 446 EA-NASILANSKKFPTLIAGRRHEKSKLCPEKVDVTSDIMSIVKGTKCKLPKGLAHKNSA 504
E N + K+ I ++ EK + D+ S ++G + P H+
Sbjct: 542 EQINKGHCGSGKR----IKSKKEEKHST---SLSSPRDLSSSIRGDRVYSPYNRRHRRRG 594
Query: 505 -DRSSKDR-ENVSGLRVKKIMKRPAEDKDSSELVQELRKEIREAVRNRSSKD 554
RSS R ++ SG K K + + S+ R RE+ R R +D
Sbjct: 595 RSRSSDSRSQSRSGHDQKSRRKHHGKKRMKSK-----RSRSRESSRPRGRRD 641
Score = 41 (19.5 bits), Expect = 0.00033, Sum P(3) = 0.00032
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 648 VLDLLRNNSQSSDTEQSTECQETNP 672
V+ + ++ + S+ ++ TEC + P
Sbjct: 906 VITIDSDSDKDSEVKEDTECDNSGP 930
>POMBASE|SPCC162.08c [details] [associations]
symbol:nup211 "nucleoporin nup211" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0006606 "protein import into nucleus" evidence=ISO] [GO:0031965
"nuclear membrane" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=ISO] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR012929 Pfam:PF07926 PomBase:SPCC162.08c GO:GO:0005737
GO:GO:0051301 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0031965
GO:GO:0005643 GO:GO:0006606 eggNOG:NOG12793 GO:GO:0006406 KO:K09291
GO:GO:0043021 GO:GO:0034399 OrthoDB:EOG4QRMC3 PIR:T41023
RefSeq:NP_588236.1 HSSP:Q72LN8 ProteinModelPortal:O74424
IntAct:O74424 STRING:O74424 EnsemblFungi:SPCC162.08c.1
GeneID:2538843 KEGG:spo:SPCC162.08c OMA:HARESIS NextBio:20800025
Uniprot:O74424
Length = 1837
Score = 129 (50.5 bits), Expect = 0.00051, P = 0.00051
Identities = 98/471 (20%), Positives = 176/471 (37%)
Query: 353 LSMSKSVADTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNC 412
L K +T T + + QQ N E + K A +N+++ ++ C
Sbjct: 1364 LEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAAW--NEKC 1421
Query: 413 SGINKEITTKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEKSKL 472
+ K T+ ++ E LT N NA A K+ +L +
Sbjct: 1422 ENLKKSSLTRFA------HLKQE-LTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESA 1474
Query: 473 CPEKVDVTSDIMSIVKGTKCKLPKGLAH-KNSADRSSKDRENVSG-LRVKKIMKRPAEDK 530
+ +T + +K K + K LA KN + + + G + + K E +
Sbjct: 1475 SSDAEQITKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELR 1534
Query: 531 DSSE-LVQELRKEIREAVRNRSSKDCDENLFDPKLLAAFRAAIAGPK--CEPVKQPAHLA 587
E LVQ+++ E R +L + +A R+ + K E K+ LA
Sbjct: 1535 SDKEGLVQQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILA 1594
Query: 588 VKVKKSMLEKGKVRESLTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMKATKTEKIGTL-- 645
+ + + EK K +E L ++ N +R + E+E + + I +
Sbjct: 1595 AR-SELVAEKEKTKEELENQL--NEKSQRIK------ELEEQAQKNSSENTHDNIDDMIK 1645
Query: 646 KSVLDLLRNNSQSSDTEQSTECQETNPILSRLYLADTSVFPRKDNIMPLSALKATDNSEQ 705
+ V + L+ NS + D + ET S+ A SV+ +K + + + E
Sbjct: 1646 QQVEEKLKENSANFDVKLKKVVAETE-FRSK---AKISVYEKKTRDLQNKITQLEETIEN 1701
Query: 706 SKEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAY--EKGTRNMSCSKSNAALSKV 763
+Q + EK +D S V ET V+SK A + T S + + S
Sbjct: 1702 LNKQLSNPEK-----TDESTSSVTETKPVTSKPTASKADVGQNATEASSAKREPSGKSLS 1756
Query: 764 HPIQLGDPKVNSLKGTATSDDV--KVDKRKWALEILARKTAVACKSATHEK 812
+Q G K ++ A S V K D K ++ +++ A + +A + K
Sbjct: 1757 ARLQ-GTGKQKGVQRPAVSRPVPMKPDSGKLSITGASKRIATSKNAAQNAK 1806
>DICTYBASE|DDB_G0271058 [details] [associations]
symbol:vilC "villin-like protein C" species:44689
"Dictyostelium discoideum" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR003128 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51089 SMART:SM00262 dictyBase:DDB_G0271058 GO:GO:0007010
EMBL:AAFI02000005 GenomeReviews:CM000150_GR SUPFAM:SSF47050
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 eggNOG:NOG324767
RefSeq:XP_001134479.1 ProteinModelPortal:Q1ZXP5
EnsemblProtists:DDB0232136 GeneID:8617650 KEGG:ddi:DDB_G0271058
InParanoid:Q1ZXP5 OMA:DSRTEND Uniprot:Q1ZXP5
Length = 1528
Score = 128 (50.1 bits), Expect = 0.00053, P = 0.00053
Identities = 137/631 (21%), Positives = 238/631 (37%)
Query: 183 NSSIDLTQSTNDQSGPENANGDHLAESLFPRKVSVSVADAGETAVVVSMIGEEPNENFQS 242
+SSI L+ ST+ S EN+ GD + SL + ++S + E + EE +
Sbjct: 101 SSSIALSPSTSSYSISENSGGDS-STSLLSAQ-AISAKEEREKRR--KELEEEAKK---- 152
Query: 243 MLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPEL--SFSQDASFCLPSTSL 300
LE+E+ E +R + E +R +Q +L ++ E Q+ + L
Sbjct: 153 -LELEQQKIREEREKRKEERRLQQEEEQRK-LQDLLDKKDSEKIEKLKQEENEKLEKEE- 209
Query: 301 GSSEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNK-PSDCISNVDLHLGLSMSKSV 359
++ + D+K E+ + L K E +K + + L + K
Sbjct: 210 -KERIEKELTDKKEKEEKE---LADKLEKERQEKELADKLEKEKKEKEEKELADKLEKER 265
Query: 360 ADTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNHDNCSGINKEI 419
D K E++ ++ E+ L A+K+E KE ++ ++ + KE+
Sbjct: 266 LDKEKKDKEEKELADKLEKESQEKEL--AEKLEK-EKELADKLEKEQKEKEEKERQEKEL 322
Query: 420 TTKKVTEVPAKKIR--AEKLTQTNPHKDEANA-SILANSKKFPTLIAGRRHEKSKLCP-E 475
K E K+ + A+KL + K+ A+ K+ + + EK L E
Sbjct: 323 ADKLAKEQKEKEEKELADKLEKERQEKELADKLEKEKQEKELADKLEKEKQEKESLEKLE 382
Query: 476 KVDVTSDIMS-IVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSE 534
K ++ + K K K K K ++ K+ + + +K E
Sbjct: 383 KEKQEKELADKLAKEQKEKEEK--EEKEEKEKQEKEEKERKDKELAAAAAAAETEKLEKE 440
Query: 535 LVQELRKEIREA-VRNRSSKDCDENLFDPKLLAAFRAAIAGPKCEPVKQPAHLAVKVKKS 593
+++ +KE+ E + + K+ E KL + K E KQ LA K++K
Sbjct: 441 RLEKEKKELEEKELAEKLEKEKLEKELTDKLEKEKKEKELADKLEKEKQDKELADKLEKE 500
Query: 594 MLEKG-KVRES--LTKKIYGNSNGRRRRAWNRDCEVEFWKYRCMK--ATKTEKIGTLKSV 648
EK K R+ L K+ + + ++ + + K R K A K EK K +
Sbjct: 501 QKEKEEKQRKEKELADKL--EKEKQDKELADKLAKEKEEKERKEKELADKLEKEKKDKEL 558
Query: 649 LDLLRNNSQSSDT-EQSTECQ-ETNPILSRLYLADTSVFPRK---DNI----MPLSALKA 699
D + + D E+ + + E L L F K D + + S K
Sbjct: 559 ADKVTKEKEEKDKKEKEFKLKLEKEQKEKELKLKQEREFAEKEERDRLEREKISKSIEKE 618
Query: 700 TDNSEQSKEQAISMEKPLKLSSDNCASKVAETNKVSSKVGVLSAYEKGTRNMSCSKSNAA 759
T +S + + +S+EK L+ +N V T SS G S T++ K A
Sbjct: 619 TKSSTITDQFKLSIEKQLQSQLENKKKPVQVTEDNSSSDGSTSTLTSLTKDRVKMKGRQA 678
Query: 760 LSKVHPIQLGDPKVNSLKGTATSDDVKVDKR 790
SK H P S DDV D++
Sbjct: 679 PSKSHKA----PGSTSTSNGGGDDDVGSDQQ 705
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 128 (50.1 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 2 ESMLEEQTFQVDNTENDLLNFECGRCGICMDVVIDRGVLD-C-CQHWFCFACIDNWSTIT 59
E +E+ + + EN+ ++ C IC D + + C C H FCF CI WS T
Sbjct: 833 EKQEKEERERKEKEENESID-----CIICTDTIKKEDISTICGCTHKFCFECILEWSKQT 887
Query: 60 NLCPLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWSIEEKSNTLS--FPSYYIDENA 117
N CPLC+ F I N++ + + +++ EE N L + ++ DE
Sbjct: 888 NTCPLCKSRFVRIKRT-FKQPRKKNSVIVSAKDQIAEYTEEELVNLLGEDYEQHFNDEEE 946
Query: 118 VICLDGDGCKIRSGSMVAEESSNLDTSIACDS 149
+ D D + S S+ +++S N D + DS
Sbjct: 947 GV--DADALSVES-SLDSDDSLN-DFIVGDDS 974
Score = 55 (24.4 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 34/159 (21%), Positives = 66/159 (41%)
Query: 420 TTKKVTEVPAKKIRAEKLTQTNPHKDEANASILA---NSKKFPTLIAGRRHEKSKLCPEK 476
TT T P + R+ + T T +I +S+ PT A R + P+
Sbjct: 1266 TTTTGTGTPTTR-RSSRNTTTTTSTSPTTPTIPVTRRSSRNTPTTSATRTRTTT---PQS 1321
Query: 477 VDVTSDIMS--IVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMKRPAEDKDSSE 534
+ SD+ I+ G G + + + +D+++ + K + ++D+D+S+
Sbjct: 1322 SEDESDVPFEYIIHGKDDDDEDGSKKEEKSKKDKRDKKD----KKSKTLTISSDDEDNSK 1377
Query: 535 LVQELRKEIREAVRNRSSKD-CDENLFDPKLLAAFRAAI 572
V++ +K+ + S D DE PK+ R +I
Sbjct: 1378 KVEKNKKDKKSKTPLTFSDDESDEE--PPKIQTRRRRSI 1414
Score = 41 (19.5 bits), Expect = 0.00074, Sum P(3) = 0.00074
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 163 PEGTCEDTWLCPRCVAEVPQNSSID 187
P G CED C C+ + +S D
Sbjct: 1216 PFGECEDCGECDYCLDGLDLHSDDD 1240
>UNIPROTKB|I3LHN2 [details] [associations]
symbol:SCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0000245
"spliceosomal complex assembly" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0000245 GeneTree:ENSGT00530000063661
OMA:ECDSFCS EMBL:CU694768 Ensembl:ENSSSCT00000031177 Uniprot:I3LHN2
Length = 1456
Score = 108 (43.1 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 13 DNTEND-LLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEF 69
DNT LL E RC IC+ ++++ G + C H FC CI W+ CP+ + F
Sbjct: 26 DNTATTGLLYSEADRCPICLSCLLEKEIGFPESCNHVFCLTCILKWAETLASCPIDRKPF 85
Query: 70 QLI 72
Q +
Sbjct: 86 QAV 88
Score = 65 (27.9 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 66/327 (20%), Positives = 113/327 (34%)
Query: 230 SMIGEEPNENFQSMLEIEKGVGNEAFNPYGGDRNAKSESNERTDIQSMLQAQEPELSFSQ 289
S +G NEN + + GNE FN N ++N T + L+ ++ E
Sbjct: 627 SEVGHVENENVEIIATCNTS-GNENFNSIQDSENNSLKNNLNTQLDKSLE-EKTESLVEH 684
Query: 290 DASFCLPSTSLGSSEVKTDSADEKLNEQSSCGGVKSFLGKTFNEPYPGNKPSDCISNVDL 349
+ LP T + E K S D C S ++ EP N
Sbjct: 685 SKTTELPKTHIEQIE-KHFSEDNNEMIPMECESFCSDQNESEIEPSVNADAKQLNENSVE 743
Query: 350 HLGLSMSKSVADTNKYLTEDQITGYVQQQNPSEESLHEADKIEPGAKEENSQIIGGKRNH 409
H S K+++ ++ ++++ Q +++ +A K +S N
Sbjct: 744 H---SFQKNMSSSDP--VKEKVESVSQPSESPIDTIEKAKKPRTRRSRFHSPSTTWSPNK 798
Query: 410 DNCSGINKEITTKKVTEVPAKKIRAEKLTQTNPHKDEANASILANSKKFPTLIAGRRHEK 469
D + + E K+ R K +P K+ A + S+ P +GR
Sbjct: 799 DTAREKKRSQSPSPRRET-GKESR--KSQSPSPKKESARGRKSSRSQS-PKKDSGRERRP 854
Query: 470 SKLCPEKVDVT-----SDIMSIVKGTKCKLPKGLAHKNSADRSSKDRENVSGLRVKKIMK 524
S+ K D S+ +S + T + + + K R SG R +
Sbjct: 855 SQSRSPKRDGAKEGKRSESLSPKRDTSRENRRSQPRVKGSSPREKSRSQ-SGER-ESDRD 912
Query: 525 RPAEDKDSSELVQELRKEIREAVRNRS 551
P D+D + R+ R R+RS
Sbjct: 913 GPRRDRDRE---RRTRRWSRSRSRSRS 936
Score = 52 (23.4 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 721 SDNCASKVAET-NKVSSKVGVLSAYEKG-TRNMSCSK-SNAALSKVHPIQLGDPKVNSLK 777
S+N ++ V G + G T + S SK SNAA ++L + KV S+
Sbjct: 1304 SNNMSTPVLPALTAAPGNTGTVQGPSSGNTSSSSHSKASNAA------VKLAESKV-SVT 1356
Query: 778 GTATSDDVKVDKRKWALEILARKTAVACK 806
A++D K DK+ E A++ +A K
Sbjct: 1357 VEASADSSKTDKKLQIQERAAQEVKLAIK 1385
>TAIR|locus:2095833 [details] [associations]
symbol:AT3G58030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 KO:K10666 HOGENOM:HOG000090666
ProtClustDB:CLSN2683808 EMBL:AY081289 EMBL:BT006585 IPI:IPI00546255
RefSeq:NP_001190122.1 RefSeq:NP_191362.2 RefSeq:NP_974453.1
RefSeq:NP_974454.1 UniGene:At.34773 ProteinModelPortal:Q8RXF2
SMR:Q8RXF2 EnsemblPlants:AT3G58030.1 EnsemblPlants:AT3G58030.2
EnsemblPlants:AT3G58030.3 EnsemblPlants:AT3G58030.4 GeneID:824972
KEGG:ath:AT3G58030 TAIR:At3g58030 eggNOG:NOG244906
InParanoid:Q8RXF2 OMA:HARRIES PhylomeDB:Q8RXF2
Genevestigator:Q8RXF2 Uniprot:Q8RXF2
Length = 436
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 27 CGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNL--CPLCQGEFQLITCVPVY 78
C IC+D+ + VL CC H +C+ C+ W I++ CP+C+GE T P+Y
Sbjct: 139 CNICLDLSKEP-VLTCCGHLYCWPCLYQWLQISDAKECPVCKGEVTSKTVTPIY 191
>TAIR|locus:2016437 [details] [associations]
symbol:AT1G19310 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HSSP:P38398 EMBL:AC025808 HOGENOM:HOG000238304
KO:K10666 eggNOG:NOG300581 EMBL:AY057705 EMBL:AY116959
EMBL:AY085230 IPI:IPI00544945 PIR:E86326 RefSeq:NP_564078.1
UniGene:At.16708 ProteinModelPortal:Q9LN67 SMR:Q9LN67 IntAct:Q9LN67
EnsemblPlants:AT1G19310.1 GeneID:838513 KEGG:ath:AT1G19310
TAIR:At1g19310 InParanoid:Q9LN67 OMA:NANPWFM PhylomeDB:Q9LN67
ProtClustDB:CLSN2917022 Genevestigator:Q9LN67 Uniprot:Q9LN67
Length = 226
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 13 DNTENDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNL---CPLCQGEF 69
D ND NFEC IC+D+ D ++ C H FC+ C+ W + + CP+C+
Sbjct: 12 DTNNNDSSNFECN---ICLDLAQDP-IVTLCGHLFCWPCLYKWLHLHSQSKDCPVCKAVI 67
Query: 70 QLITCVPVYDTIGSNNIDGDSLS 92
+ VP+Y G ++ D S S
Sbjct: 68 EEDRLVPLYGR-GKSSADPRSKS 89
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 845 827 0.00079 122 3 11 23 0.47 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 626 (67 KB)
Total size of DFA: 429 KB (2203 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 95.62u 0.12s 95.74t Elapsed: 00:00:05
Total cpu time: 95.63u 0.12s 95.75t Elapsed: 00:00:05
Start: Fri May 10 22:30:11 2013 End: Fri May 10 22:30:16 2013