Query 003132
Match_columns 845
No_of_seqs 276 out of 2159
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 14:25:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap4_A E3 ubiquitin ligase RNF 99.2 1.5E-12 5.2E-17 118.2 -0.1 115 21-181 4-124 (133)
2 2ysm_A Myeloid/lymphoid or mix 99.2 1.4E-11 4.9E-16 112.5 4.9 99 21-179 4-104 (111)
3 3v43_A Histone acetyltransfera 99.1 9.7E-11 3.3E-15 107.8 8.4 56 118-178 56-111 (112)
4 2kwj_A Zinc finger protein DPF 99.1 2.6E-11 8.8E-16 112.0 4.2 56 118-179 53-108 (114)
5 2djb_A Polycomb group ring fin 99.1 1.3E-10 4.3E-15 97.4 5.4 51 21-71 12-62 (72)
6 3ng2_A RNF4, snurf, ring finge 99.0 8.7E-11 3E-15 97.0 3.0 53 21-73 7-65 (71)
7 1f62_A Transcription factor WS 99.0 1.1E-10 3.8E-15 93.3 3.3 49 125-179 2-50 (51)
8 2e6r_A Jumonji/ARID domain-con 99.0 1.2E-10 4.1E-15 104.5 3.2 56 118-179 11-66 (92)
9 1chc_A Equine herpes virus-1 r 99.0 2.9E-10 1E-14 93.5 5.1 51 22-72 3-53 (68)
10 2ea6_A Ring finger protein 4; 99.0 2.1E-10 7.3E-15 93.8 3.8 53 18-70 9-67 (69)
11 2d8t_A Dactylidin, ring finger 99.0 3.2E-10 1.1E-14 94.7 4.9 53 18-71 9-61 (71)
12 1iym_A EL5; ring-H2 finger, ub 99.0 2.8E-10 9.6E-15 90.0 4.3 48 23-70 4-54 (55)
13 2ect_A Ring finger protein 126 99.0 3.7E-10 1.3E-14 95.4 5.2 56 17-72 8-65 (78)
14 3asl_A E3 ubiquitin-protein li 99.0 3.2E-10 1.1E-14 97.1 4.9 58 115-179 11-69 (70)
15 2ecl_A Ring-box protein 2; RNF 99.0 3E-10 1E-14 98.1 4.6 51 22-72 13-77 (81)
16 2e6s_A E3 ubiquitin-protein li 99.0 4.7E-10 1.6E-14 97.9 5.6 55 117-178 21-76 (77)
17 2kiz_A E3 ubiquitin-protein li 99.0 4.1E-10 1.4E-14 93.1 4.8 52 20-71 10-63 (69)
18 3shb_A E3 ubiquitin-protein li 99.0 4.1E-10 1.4E-14 98.4 4.9 58 114-178 18-76 (77)
19 2yur_A Retinoblastoma-binding 98.9 4.8E-10 1.6E-14 94.7 4.7 51 20-70 11-63 (74)
20 1fp0_A KAP-1 corepressor; PHD 98.9 1.1E-09 3.7E-14 98.2 7.2 49 122-179 24-72 (88)
21 2csy_A Zinc finger protein 183 98.9 6.1E-10 2.1E-14 95.1 5.1 50 20-70 11-60 (81)
22 2xeu_A Ring finger protein 4; 98.9 2E-10 6.9E-15 92.6 1.9 50 23-72 2-57 (64)
23 2ep4_A Ring finger protein 24; 98.9 6.7E-10 2.3E-14 93.0 4.8 53 21-73 12-66 (74)
24 1mm2_A MI2-beta; PHD, zinc fin 98.9 1.1E-09 3.7E-14 91.3 5.5 48 123-179 9-56 (61)
25 2ecm_A Ring finger and CHY zin 98.9 5.8E-10 2E-14 88.0 3.7 48 23-70 4-54 (55)
26 4ayc_A E3 ubiquitin-protein li 98.9 4.3E-10 1.5E-14 105.6 3.2 48 23-71 52-99 (138)
27 3lrq_A E3 ubiquitin-protein li 98.9 5.1E-10 1.8E-14 99.9 2.8 50 22-71 20-70 (100)
28 2ysl_A Tripartite motif-contai 98.9 1.5E-09 5E-14 90.3 5.2 50 21-71 17-69 (73)
29 1x4j_A Ring finger protein 38; 98.9 6.8E-10 2.3E-14 93.5 3.2 50 21-70 20-71 (75)
30 3ztg_A E3 ubiquitin-protein li 98.9 1.2E-09 4.3E-14 94.9 4.9 50 21-70 10-61 (92)
31 3dpl_R Ring-box protein 1; ubi 98.9 1.1E-09 3.9E-14 100.2 4.6 50 22-71 35-101 (106)
32 2y43_A E3 ubiquitin-protein li 98.9 7.7E-10 2.6E-14 97.7 3.2 49 23-71 21-69 (99)
33 2lri_C Autoimmune regulator; Z 98.9 9.5E-10 3.2E-14 93.5 3.6 48 123-179 12-59 (66)
34 1v87_A Deltex protein 2; ring- 98.9 1.2E-09 4E-14 98.5 4.3 49 23-71 24-94 (114)
35 2ckl_A Polycomb group ring fin 98.9 1E-09 3.6E-14 98.5 4.0 50 22-71 13-62 (108)
36 2l5u_A Chromodomain-helicase-D 98.9 9.3E-10 3.2E-14 91.7 3.1 49 122-179 10-58 (61)
37 2ecn_A Ring finger protein 141 98.8 8.3E-10 2.8E-14 91.5 2.8 48 22-71 13-60 (70)
38 2l0b_A E3 ubiquitin-protein li 98.8 1.4E-09 4.7E-14 95.6 4.1 50 21-70 37-88 (91)
39 2ecy_A TNF receptor-associated 98.8 2.1E-09 7.3E-14 88.4 4.9 49 21-70 12-61 (66)
40 1xwh_A Autoimmune regulator; P 98.8 1E-09 3.6E-14 92.5 3.0 48 123-179 8-55 (66)
41 1wev_A Riken cDNA 1110020M19; 98.8 9E-10 3.1E-14 98.0 2.6 53 123-179 16-72 (88)
42 2puy_A PHD finger protein 21A; 98.8 1.2E-09 4.2E-14 90.3 3.1 48 123-179 5-52 (60)
43 2yql_A PHD finger protein 21A; 98.8 1.4E-09 4.6E-14 89.0 3.2 47 123-178 9-55 (56)
44 2ct2_A Tripartite motif protei 98.8 3.2E-09 1.1E-13 90.9 5.5 51 21-71 12-68 (88)
45 2egp_A Tripartite motif-contai 98.8 1.9E-09 6.5E-14 90.7 3.8 49 22-71 10-65 (79)
46 1t1h_A Gspef-atpub14, armadill 98.8 2E-09 6.9E-14 90.9 4.0 49 22-71 6-55 (78)
47 2ecw_A Tripartite motif-contai 98.8 3.5E-09 1.2E-13 89.5 5.3 49 21-70 16-70 (85)
48 3ask_A E3 ubiquitin-protein li 98.8 2.3E-09 7.9E-14 110.2 4.8 56 117-179 169-225 (226)
49 2yt5_A Metal-response element- 98.8 1E-09 3.5E-14 91.8 1.7 53 123-179 6-61 (66)
50 2ysj_A Tripartite motif-contai 98.8 4.2E-09 1.4E-13 85.7 5.3 44 21-65 17-63 (63)
51 2ecv_A Tripartite motif-contai 98.8 5.1E-09 1.8E-13 88.4 5.0 50 21-71 16-71 (85)
52 2ku3_A Bromodomain-containing 98.8 1.6E-09 5.6E-14 93.2 1.7 51 123-179 16-66 (71)
53 1g25_A CDK-activating kinase a 98.8 3.3E-09 1.1E-13 87.0 3.4 49 23-71 2-55 (65)
54 3fl2_A E3 ubiquitin-protein li 98.8 2.5E-09 8.5E-14 98.2 2.9 49 22-71 50-99 (124)
55 2ecj_A Tripartite motif-contai 98.8 6.6E-09 2.3E-13 82.5 5.0 45 20-65 11-58 (58)
56 3l11_A E3 ubiquitin-protein li 98.7 2.8E-09 9.4E-14 96.6 2.8 52 19-71 10-62 (115)
57 2ckl_B Ubiquitin ligase protei 98.7 2.7E-09 9.4E-14 102.4 2.9 48 23-70 53-101 (165)
58 2k16_A Transcription initiatio 98.7 3.2E-09 1.1E-13 91.0 2.8 50 124-179 19-68 (75)
59 2l43_A N-teminal domain from h 98.7 2.5E-09 8.5E-14 95.3 1.4 51 123-179 25-75 (88)
60 2kr4_A Ubiquitin conjugation f 98.7 9.4E-09 3.2E-13 89.9 4.7 49 22-71 12-60 (85)
61 4a0k_B E3 ubiquitin-protein li 98.7 2.2E-09 7.4E-14 100.4 0.4 49 23-71 47-112 (117)
62 3u5n_A E3 ubiquitin-protein li 98.7 8.4E-09 2.9E-13 103.5 4.7 48 123-179 7-54 (207)
63 3o36_A Transcription intermedi 98.7 1.2E-08 4.2E-13 100.4 5.0 48 123-179 4-51 (184)
64 2kre_A Ubiquitin conjugation f 98.7 1.7E-08 6E-13 91.1 5.1 49 22-71 27-75 (100)
65 1jm7_A BRCA1, breast cancer ty 98.6 9.4E-09 3.2E-13 91.8 2.7 48 23-71 20-70 (112)
66 1jm7_B BARD1, BRCA1-associated 98.6 8.2E-09 2.8E-13 94.2 2.3 47 22-70 20-66 (117)
67 1z6u_A NP95-like ring finger p 98.6 1.1E-08 3.8E-13 98.2 2.9 48 23-71 77-125 (150)
68 2lv9_A Histone-lysine N-methyl 98.6 3.2E-08 1.1E-12 89.5 5.1 49 123-179 28-76 (98)
69 2ro1_A Transcription intermedi 98.6 2.7E-08 9.3E-13 99.1 5.1 48 123-179 2-49 (189)
70 1wgm_A Ubiquitin conjugation f 98.6 3E-08 1E-12 89.2 4.9 49 22-71 20-69 (98)
71 4ap4_A E3 ubiquitin ligase RNF 98.6 1.4E-08 4.9E-13 92.0 2.4 53 21-73 69-127 (133)
72 3hct_A TNF receptor-associated 98.6 2.2E-08 7.5E-13 91.5 3.6 51 20-71 14-65 (118)
73 1rmd_A RAG1; V(D)J recombinati 98.5 2.4E-08 8.2E-13 90.5 2.6 48 23-71 22-70 (116)
74 2yu4_A E3 SUMO-protein ligase 98.5 3.9E-08 1.3E-12 87.2 3.4 47 22-68 5-59 (94)
75 1e4u_A Transcriptional repress 98.5 7.1E-08 2.4E-12 83.7 4.6 50 22-71 9-62 (78)
76 2c2l_A CHIP, carboxy terminus 98.5 5.1E-08 1.7E-12 98.5 4.1 50 21-71 205-255 (281)
77 1bor_A Transcription factor PM 98.5 3.1E-08 1.1E-12 79.9 1.9 45 22-70 4-48 (56)
78 2ct0_A Non-SMC element 1 homol 98.5 1.5E-07 5.1E-12 81.7 5.9 52 20-71 11-64 (74)
79 4ic3_A E3 ubiquitin-protein li 98.4 7.9E-08 2.7E-12 81.6 3.5 46 23-73 23-69 (74)
80 2d8s_A Cellular modulator of i 98.4 9.5E-08 3.3E-12 83.5 3.6 52 21-72 12-71 (80)
81 2y1n_A E3 ubiquitin-protein li 98.4 1.3E-07 4.6E-12 103.8 4.8 50 23-73 331-381 (389)
82 3knv_A TNF receptor-associated 98.4 5.7E-08 2E-12 92.5 1.2 49 21-70 28-77 (141)
83 2vje_A E3 ubiquitin-protein li 98.4 1.3E-07 4.6E-12 78.5 3.3 51 23-73 7-59 (64)
84 1wen_A Inhibitor of growth fam 98.3 5.1E-07 1.7E-11 77.7 5.8 47 123-179 16-65 (71)
85 2vje_B MDM4 protein; proto-onc 98.3 2.3E-07 7.8E-12 76.9 3.1 51 23-73 6-58 (63)
86 1weu_A Inhibitor of growth fam 98.3 1E-06 3.4E-11 79.5 6.3 48 122-179 35-85 (91)
87 2f42_A STIP1 homology and U-bo 98.2 3.4E-07 1.2E-11 91.2 3.2 49 22-71 104-153 (179)
88 3hcs_A TNF receptor-associated 98.2 3.1E-07 1.1E-11 88.4 2.6 51 20-71 14-65 (170)
89 3htk_C E3 SUMO-protein ligase 98.2 4.8E-07 1.6E-11 95.1 4.0 52 20-71 177-232 (267)
90 2ecg_A Baculoviral IAP repeat- 98.2 4.8E-07 1.6E-11 76.8 2.6 44 23-71 24-68 (75)
91 2ea5_A Cell growth regulator w 98.2 1.7E-06 5.9E-11 72.9 5.2 51 18-73 9-60 (68)
92 2jmi_A Protein YNG1, ING1 homo 98.2 8.8E-07 3E-11 79.7 3.4 46 124-179 27-76 (90)
93 2vnf_A ING 4, P29ING4, inhibit 98.1 3.3E-07 1.1E-11 76.3 0.5 36 142-179 21-59 (60)
94 4gne_A Histone-lysine N-methyl 98.1 1E-06 3.4E-11 81.5 3.4 46 123-179 15-62 (107)
95 1we9_A PHD finger family prote 98.1 8.2E-07 2.8E-11 73.9 2.4 52 123-179 6-58 (64)
96 3c6w_A P28ING5, inhibitor of g 98.1 4.7E-07 1.6E-11 75.3 0.5 36 142-179 20-58 (59)
97 2yho_A E3 ubiquitin-protein li 98.1 1.3E-06 4.4E-11 75.6 3.1 46 23-73 17-63 (79)
98 2g6q_A Inhibitor of growth pro 98.1 5.8E-07 2E-11 75.4 0.5 36 142-179 22-60 (62)
99 3o70_A PHD finger protein 13; 98.0 1.4E-06 4.7E-11 74.4 2.3 49 123-179 19-67 (68)
100 2ysm_A Myeloid/lymphoid or mix 98.0 3.7E-06 1.2E-10 76.8 5.1 49 123-177 7-55 (111)
101 2bay_A PRE-mRNA splicing facto 98.0 2.2E-06 7.4E-11 71.3 2.1 50 24-73 3-52 (61)
102 1wim_A KIAA0161 protein; ring 98.0 2.5E-06 8.7E-11 74.9 2.5 47 22-68 3-61 (94)
103 3t6p_A Baculoviral IAP repeat- 97.9 3.2E-06 1.1E-10 91.5 3.2 46 23-73 294-340 (345)
104 1wee_A PHD finger family prote 97.9 3.9E-06 1.3E-10 71.7 2.5 38 142-179 29-66 (72)
105 3k1l_B Fancl; UBC, ring, RWD, 97.8 3.5E-06 1.2E-10 91.6 0.9 50 21-70 305-372 (381)
106 2kgg_A Histone demethylase jar 97.8 3.3E-06 1.1E-10 68.1 0.2 47 126-177 5-52 (52)
107 1wep_A PHF8; structural genomi 97.8 7.6E-06 2.6E-10 71.0 2.1 49 125-179 14-63 (79)
108 1x4i_A Inhibitor of growth pro 97.8 6.5E-06 2.2E-10 70.6 1.5 35 143-179 18-55 (70)
109 1wem_A Death associated transc 97.7 3.3E-06 1.1E-10 72.6 -1.2 49 124-179 17-70 (76)
110 2rsd_A E3 SUMO-protein ligase 97.7 9.4E-06 3.2E-10 68.8 1.6 39 141-179 21-65 (68)
111 2xb1_A Pygopus homolog 2, B-ce 97.7 4.2E-06 1.4E-10 76.7 -0.6 50 125-179 5-61 (105)
112 3o7a_A PHD finger protein 13 v 97.7 7.2E-06 2.5E-10 66.1 0.7 37 141-178 15-51 (52)
113 2vpb_A Hpygo1, pygopus homolog 97.7 3.3E-06 1.1E-10 71.5 -1.6 48 125-177 10-64 (65)
114 1wew_A DNA-binding family prot 97.6 1.5E-05 5.1E-10 69.2 1.6 49 124-179 17-72 (78)
115 1vyx_A ORF K3, K3RING; zinc-bi 97.6 3.7E-05 1.3E-09 63.8 3.6 48 22-70 4-58 (60)
116 2lbm_A Transcriptional regulat 97.6 1.2E-05 4.2E-10 77.6 0.5 47 124-179 64-117 (142)
117 2ri7_A Nucleosome-remodeling f 97.5 5.4E-06 1.9E-10 80.5 -2.4 50 124-179 9-59 (174)
118 3vk6_A E3 ubiquitin-protein li 97.5 5.4E-05 1.9E-09 69.5 4.0 50 26-75 3-53 (101)
119 3kqi_A GRC5, PHD finger protei 97.5 1.8E-05 6E-10 68.2 0.6 39 141-179 22-61 (75)
120 3v43_A Histone acetyltransfera 97.4 2.2E-05 7.6E-10 72.2 0.2 54 124-177 6-62 (112)
121 2kwj_A Zinc finger protein DPF 97.4 3.5E-05 1.2E-09 71.2 1.1 54 124-177 2-59 (114)
122 3pur_A Lysine-specific demethy 97.3 8.2E-05 2.8E-09 84.5 3.1 40 140-179 54-94 (528)
123 3lqh_A Histone-lysine N-methyl 97.2 6.2E-05 2.1E-09 75.3 0.8 55 123-179 2-63 (183)
124 3nw0_A Non-structural maintena 96.9 0.00043 1.5E-08 71.5 4.0 47 24-70 180-228 (238)
125 3ql9_A Transcriptional regulat 96.9 8.5E-05 2.9E-09 70.8 -1.9 47 124-179 58-111 (129)
126 3kv5_D JMJC domain-containing 96.6 0.00026 9E-09 79.9 -0.6 39 141-179 49-88 (488)
127 3kv4_A PHD finger protein 8; e 96.3 0.00029 9.9E-09 78.9 -2.4 39 141-179 17-56 (447)
128 4bbq_A Lysine-specific demethy 96.2 0.0019 6.5E-08 59.0 2.5 39 141-179 72-114 (117)
129 4gne_A Histone-lysine N-methyl 95.8 0.0071 2.4E-07 55.9 4.3 38 126-173 61-98 (107)
130 2ku7_A MLL1 PHD3-CYP33 RRM chi 95.5 0.0052 1.8E-07 55.7 2.2 36 144-179 2-44 (140)
131 1wil_A KIAA1045 protein; ring 95.4 0.0063 2.2E-07 54.5 2.3 50 123-179 15-76 (89)
132 2jun_A Midline-1; B-BOX, TRIM, 92.5 0.052 1.8E-06 47.8 2.3 34 23-56 2-38 (101)
133 2lri_C Autoimmune regulator; Z 91.5 0.18 6.2E-06 42.7 4.4 46 22-68 10-59 (66)
134 1weq_A PHD finger protein 7; s 91.1 0.48 1.6E-05 42.4 6.9 54 122-179 25-79 (85)
135 2ko5_A Ring finger protein Z; 87.6 0.21 7.3E-06 45.7 2.0 46 24-71 28-73 (99)
136 1iym_A EL5; ring-H2 finger, ub 84.8 0.64 2.2E-05 36.0 3.2 48 123-179 5-52 (55)
137 3u5n_A E3 ubiquitin-protein li 83.8 0.36 1.2E-05 48.3 1.7 46 23-69 6-55 (207)
138 3o36_A Transcription intermedi 83.3 0.43 1.5E-05 46.7 2.0 45 23-68 3-51 (184)
139 3rsn_A SET1/ASH2 histone methy 83.0 0.79 2.7E-05 45.9 3.7 38 142-179 18-59 (177)
140 2l5u_A Chromodomain-helicase-D 82.8 1 3.6E-05 37.2 3.8 46 21-67 8-57 (61)
141 2k16_A Transcription initiatio 80.2 0.68 2.3E-05 39.3 1.8 51 20-70 14-70 (75)
142 1mm2_A MI2-beta; PHD, zinc fin 79.5 0.73 2.5E-05 38.1 1.8 46 22-68 7-56 (61)
143 1fp0_A KAP-1 corepressor; PHD 79.2 1.2 4.1E-05 40.0 3.2 50 17-67 18-71 (88)
144 2yql_A PHD finger protein 21A; 78.9 0.43 1.5E-05 38.7 0.2 46 21-67 6-55 (56)
145 2lbm_A Transcriptional regulat 78.5 1.5 5.3E-05 42.4 3.9 45 22-67 61-116 (142)
146 1weo_A Cellulose synthase, cat 77.8 2.3 7.8E-05 38.6 4.5 51 21-71 13-70 (93)
147 2lv9_A Histone-lysine N-methyl 77.4 1.1 3.7E-05 40.4 2.4 53 14-67 18-75 (98)
148 1we9_A PHD finger family prote 76.7 0.63 2.1E-05 38.3 0.6 48 21-68 3-58 (64)
149 1wev_A Riken cDNA 1110020M19; 76.6 0.4 1.4E-05 42.5 -0.7 53 17-69 9-73 (88)
150 2ect_A Ring finger protein 126 75.8 2 6.9E-05 35.6 3.5 48 123-180 15-62 (78)
151 2ecm_A Ring finger and CHY zin 75.0 0.78 2.7E-05 35.4 0.7 49 123-180 5-53 (55)
152 3a1b_A DNA (cytosine-5)-methyl 73.6 0.77 2.6E-05 45.3 0.4 47 124-179 80-134 (159)
153 1xwh_A Autoimmune regulator; P 73.4 0.88 3E-05 38.1 0.6 45 22-67 6-54 (66)
154 1wen_A Inhibitor of growth fam 73.3 2.2 7.5E-05 36.5 3.1 52 16-68 8-65 (71)
155 2ct0_A Non-SMC element 1 homol 73.1 1.1 3.8E-05 38.7 1.2 46 124-179 16-61 (74)
156 2ecl_A Ring-box protein 2; RNF 72.9 1.4 4.9E-05 37.5 1.8 28 148-179 46-73 (81)
157 3ql9_A Transcriptional regulat 72.7 2.6 8.9E-05 40.2 3.7 44 23-67 56-110 (129)
158 2l0b_A E3 ubiquitin-protein li 72.2 0.82 2.8E-05 39.7 0.2 49 122-180 39-87 (91)
159 2kiz_A E3 ubiquitin-protein li 72.1 1.1 3.6E-05 36.4 0.8 48 123-180 14-61 (69)
160 2puy_A PHD finger protein 21A; 71.9 1 3.5E-05 36.9 0.7 46 22-68 3-52 (60)
161 2ro1_A Transcription intermedi 71.6 1.4 4.8E-05 43.8 1.7 44 24-68 2-49 (189)
162 1x4j_A Ring finger protein 38; 70.0 0.59 2E-05 38.8 -1.2 48 123-180 23-70 (75)
163 1v87_A Deltex protein 2; ring- 69.7 0.78 2.7E-05 40.8 -0.5 34 147-180 58-92 (114)
164 2pv0_B DNA (cytosine-5)-methyl 68.9 0.69 2.4E-05 51.2 -1.3 47 124-179 94-148 (386)
165 2l43_A N-teminal domain from h 67.7 2.7 9.2E-05 37.2 2.5 49 20-68 21-75 (88)
166 1weu_A Inhibitor of growth fam 67.6 3.6 0.00012 37.0 3.3 49 19-68 31-85 (91)
167 4a0k_B E3 ubiquitin-protein li 67.4 1.3 4.4E-05 41.3 0.4 31 145-179 79-109 (117)
168 1f62_A Transcription factor WS 67.4 3.8 0.00013 32.2 3.1 42 26-67 2-49 (51)
169 1wew_A DNA-binding family prot 66.7 2.8 9.5E-05 36.1 2.3 49 19-68 11-72 (78)
170 3dpl_R Ring-box protein 1; ubi 65.2 1.7 5.8E-05 39.6 0.7 30 146-179 69-98 (106)
171 2ku3_A Bromodomain-containing 63.8 2.6 9.1E-05 36.0 1.6 51 17-67 9-65 (71)
172 2ysl_A Tripartite motif-contai 63.5 2.8 9.6E-05 34.1 1.7 48 123-180 20-67 (73)
173 2yt5_A Metal-response element- 62.8 1.8 6E-05 35.7 0.4 48 21-68 3-61 (66)
174 1wem_A Death associated transc 62.3 4 0.00014 34.7 2.5 45 23-68 15-70 (76)
175 2cs3_A Protein C14ORF4, MY039 61.9 7.7 0.00026 34.8 4.2 37 21-57 12-51 (93)
176 1wep_A PHF8; structural genomi 60.8 6.6 0.00022 33.7 3.6 49 20-69 8-64 (79)
177 2egp_A Tripartite motif-contai 60.7 6.2 0.00021 32.4 3.3 49 124-181 13-64 (79)
178 2e6r_A Jumonji/ARID domain-con 60.2 2.7 9.2E-05 37.5 1.1 48 21-68 13-66 (92)
179 2d8s_A Cellular modulator of i 59.3 2.2 7.6E-05 37.0 0.3 52 123-180 15-68 (80)
180 3lqh_A Histone-lysine N-methyl 58.8 3.5 0.00012 41.2 1.8 47 24-70 2-65 (183)
181 2d8t_A Dactylidin, ring finger 58.2 3.2 0.00011 33.9 1.2 45 123-180 15-59 (71)
182 3m62_A Ubiquitin conjugation f 57.5 5.7 0.00019 48.6 3.5 50 22-71 889-938 (968)
183 3l11_A E3 ubiquitin-protein li 57.3 4.8 0.00016 35.9 2.2 44 124-179 16-59 (115)
184 2ep4_A Ring finger protein 24; 57.1 2 6.9E-05 35.2 -0.3 48 123-180 15-62 (74)
185 2pv0_B DNA (cytosine-5)-methyl 56.6 8 0.00027 42.9 4.2 45 23-68 92-148 (386)
186 2ea6_A Ring finger protein 4; 56.1 1.5 5.3E-05 35.0 -1.1 52 123-180 15-66 (69)
187 3nw0_A Non-structural maintena 55.1 4.4 0.00015 41.7 1.8 48 123-180 180-227 (238)
188 2ecv_A Tripartite motif-contai 54.8 4.3 0.00015 33.5 1.4 50 123-181 19-70 (85)
189 3a1b_A DNA (cytosine-5)-methyl 53.5 9.1 0.00031 37.8 3.6 43 24-67 79-133 (159)
190 1jm7_A BRCA1, breast cancer ty 52.5 5.9 0.0002 34.7 2.0 47 124-180 22-68 (112)
191 1wil_A KIAA1045 protein; ring 51.8 14 0.00047 33.4 4.2 46 23-68 14-76 (89)
192 3k1l_B Fancl; UBC, ring, RWD, 51.5 5 0.00017 44.3 1.6 55 122-179 307-370 (381)
193 2vpb_A Hpygo1, pygopus homolog 49.5 3.4 0.00012 34.8 -0.1 44 23-66 7-64 (65)
194 4ayc_A E3 ubiquitin-protein li 49.1 3.8 0.00013 38.0 0.2 43 125-180 55-97 (138)
195 1vyx_A ORF K3, K3RING; zinc-bi 48.8 2.2 7.4E-05 35.1 -1.4 49 123-179 6-56 (60)
196 3o70_A PHD finger protein 13; 48.1 4.6 0.00016 34.2 0.5 48 19-67 14-66 (68)
197 2jmi_A Protein YNG1, ING1 homo 47.8 3.8 0.00013 36.8 -0.0 48 19-67 21-75 (90)
198 3lrq_A E3 ubiquitin-protein li 47.5 2.3 7.8E-05 37.5 -1.5 46 124-180 23-68 (100)
199 3fl2_A E3 ubiquitin-protein li 47.5 3.1 0.00011 37.7 -0.7 46 124-181 53-98 (124)
200 3i2d_A E3 SUMO-protein ligase 47.4 12 0.0004 41.4 3.7 50 22-71 247-300 (371)
201 2ct2_A Tripartite motif protei 46.9 7.8 0.00027 32.4 1.7 52 123-180 15-66 (88)
202 2ckl_B Ubiquitin ligase protei 46.4 3.3 0.00011 39.3 -0.7 46 124-180 55-100 (165)
203 2ri7_A Nucleosome-remodeling f 46.1 4.8 0.00016 38.8 0.3 46 22-68 6-59 (174)
204 2ecy_A TNF receptor-associated 45.6 5.4 0.00018 32.1 0.5 45 124-180 16-60 (66)
205 3ask_A E3 ubiquitin-protein li 45.3 7 0.00024 40.5 1.4 43 25-67 175-224 (226)
206 4fo9_A E3 SUMO-protein ligase 45.2 13 0.00045 40.8 3.7 49 23-71 214-266 (360)
207 2xb1_A Pygopus homolog 2, B-ce 44.9 3.3 0.00011 37.8 -0.9 45 25-69 4-62 (105)
208 1jm7_B BARD1, BRCA1-associated 44.2 23 0.00078 31.7 4.5 44 123-180 22-65 (117)
209 3asl_A E3 ubiquitin-protein li 44.1 9.2 0.00032 32.4 1.8 43 26-68 20-69 (70)
210 2e6s_A E3 ubiquitin-protein li 43.3 7.4 0.00025 33.8 1.1 43 25-67 27-76 (77)
211 2ecw_A Tripartite motif-contai 43.1 6.8 0.00023 32.2 0.8 50 123-181 19-70 (85)
212 1bor_A Transcription factor PM 37.7 42 0.0014 26.3 4.6 41 123-179 6-46 (56)
213 2jmo_A Parkin; IBR, E3 ligase, 36.9 6.4 0.00022 34.0 -0.3 38 24-63 25-74 (80)
214 1z60_A TFIIH basal transcripti 36.4 24 0.00081 29.6 3.0 41 25-65 16-58 (59)
215 2g6q_A Inhibitor of growth pro 36.2 7.1 0.00024 32.5 -0.2 45 22-67 9-59 (62)
216 1weo_A Cellulose synthase, cat 35.5 26 0.00088 31.9 3.3 53 122-179 15-67 (93)
217 1wee_A PHD finger family prote 35.2 10 0.00035 31.9 0.7 47 21-68 13-66 (72)
218 3mjh_B Early endosome antigen 34.4 10 0.00034 28.7 0.4 16 21-36 2-17 (34)
219 4bbq_A Lysine-specific demethy 33.0 6.7 0.00023 35.5 -0.9 26 147-179 18-43 (117)
220 3kqi_A GRC5, PHD finger protei 32.0 15 0.00052 31.2 1.2 48 20-68 6-61 (75)
221 2fiy_A Protein FDHE homolog; F 31.2 9 0.00031 41.1 -0.4 47 22-68 180-231 (309)
222 2y43_A E3 ubiquitin-protein li 29.7 10 0.00035 32.9 -0.3 45 124-180 23-67 (99)
223 2rsd_A E3 SUMO-protein ligase 29.1 9.4 0.00032 31.9 -0.6 44 23-67 9-64 (68)
224 1wd2_A Ariadne-1 protein homol 28.2 12 0.00041 31.0 -0.1 34 25-58 7-47 (60)
225 3shb_A E3 ubiquitin-protein li 28.1 19 0.00064 31.3 1.1 42 26-67 28-76 (77)
226 1z6u_A NP95-like ring finger p 27.5 12 0.0004 35.7 -0.3 46 124-181 79-124 (150)
227 2ckl_A Polycomb group ring fin 26.6 12 0.00042 32.9 -0.3 45 124-180 16-60 (108)
228 3vk6_A E3 ubiquitin-protein li 25.3 6.5 0.00022 36.3 -2.3 27 154-180 21-47 (101)
229 2ct7_A Ring finger protein 31; 24.6 12 0.0004 32.6 -0.8 29 27-55 28-61 (86)
230 3t7l_A Zinc finger FYVE domain 24.2 51 0.0017 29.0 3.2 33 23-55 19-54 (90)
231 3t37_A Probable dehydrogenase; 24.1 20 0.0007 39.0 0.8 22 674-695 486-507 (526)
232 2zet_C Melanophilin; complex, 23.0 36 0.0012 33.1 2.2 45 23-68 67-117 (153)
233 1e4u_A Transcriptional repress 22.1 40 0.0014 28.8 2.0 50 123-180 11-60 (78)
234 3kv5_D JMJC domain-containing 21.4 23 0.00079 40.2 0.5 47 21-68 34-88 (488)
235 3kv4_A PHD finger protein 8; e 20.0 23 0.00079 39.8 0.1 45 24-69 5-57 (447)
No 1
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.20 E-value=1.5e-12 Score=118.17 Aligned_cols=115 Identities=23% Similarity=0.438 Sum_probs=77.3
Q ss_pred Ccccccccccccccccc------eeecCCCCcccHhHHHhhhccCCCCCCccCccceeeeccccccCCCCcccCCccccC
Q 003132 21 NFECGRCGICMDVVIDR------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCVPVYDTIGSNNIDGDSLSRG 94 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~~ipV~d~iGs~~i~~~sL~~r 94 (845)
..+...|+||++.+.++ .+..+|+|+||..||..|+.....||+||..+......++
T Consensus 4 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l----------------- 66 (133)
T 4ap4_A 4 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPI----------------- 66 (133)
T ss_dssp -CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCEEEC-----------------
T ss_pred CCCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCcccccccc-----------------
Confidence 34568999999999765 2666799999999999999998999999988753221110
Q ss_pred CccccccccCccCCCccccccccccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCC
Q 003132 95 EDWSIEEKSNTLSFPSYYIDENAVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCP 174 (845)
Q Consensus 95 dd~~IqdedeslefPs~YIDee~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP 174 (845)
|++. +...|.+|........ ........-.|+..||..|+...+.. ...||
T Consensus 67 -----------------~i~~------~~~~C~iC~~~~~~~~--~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP 117 (133)
T 4ap4_A 67 -----------------YIGS------GTVSCPICMDGYSEIV--QNGRLIVSTECGHVFCSQCLRDSLKN----ANTCP 117 (133)
T ss_dssp -----------------BCSS------SSCBCTTTCCBHHHHH--HTTCCEEEETTSBEEEHHHHHHHHHH----CSBCT
T ss_pred -----------------ccCC------CCCCCCCCCCcccccc--ccCcceEeCCCCChhhHHHHHHHHHc----CCCCC
Confidence 0010 1234889954321100 00112345689999999999877532 35899
Q ss_pred cCCCCCC
Q 003132 175 RCVAEVP 181 (845)
Q Consensus 175 ~Cr~~~~ 181 (845)
.|+..+.
T Consensus 118 ~Cr~~~~ 124 (133)
T 4ap4_A 118 TCRKKIN 124 (133)
T ss_dssp TTCCBCC
T ss_pred CCCCcCC
Confidence 9998843
No 2
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.17 E-value=1.4e-11 Score=112.50 Aligned_cols=99 Identities=22% Similarity=0.464 Sum_probs=72.5
Q ss_pred Ccccccccccccccc--cceeecCCCCcccHhHHHhhhccCCCCCCccCccceeeeccccccCCCCcccCCccccCCccc
Q 003132 21 NFECGRCGICMDVVI--DRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLITCVPVYDTIGSNNIDGDSLSRGEDWS 98 (845)
Q Consensus 21 ssEd~~CpICLE~f~--d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~~ipV~d~iGs~~i~~~sL~~rdd~~ 98 (845)
...+..|.||.+.-. +......|...||..|+..... +
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~------------------~---------------------- 43 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVT------------------P---------------------- 43 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCC------------------T----------------------
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccc------------------c----------------------
Confidence 345689999988632 2256678999999888753110 0
Q ss_pred cccccCccCCCccccccccccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCC
Q 003132 99 IEEKSNTLSFPSYYIDENAVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178 (845)
Q Consensus 99 IqdedeslefPs~YIDee~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~ 178 (845)
+. . ..+.|.++..|.+|+.. ++++.||+||.|+++||++|++|++..+|.+.|+|+.|..
T Consensus 44 ~~--~------------~~W~C~~C~~C~~C~~~------~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 44 LK--R------------AGWQCPECKVCQNCKQS------GEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp TT--S------------TTCCCTTTCCCTTTCCC------SCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred cc--c------------cCccCCcCCcccccCcc------CCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 00 0 12456666789999643 2345799999999999999999999999999999999976
Q ss_pred C
Q 003132 179 E 179 (845)
Q Consensus 179 ~ 179 (845)
.
T Consensus 104 c 104 (111)
T 2ysm_A 104 C 104 (111)
T ss_dssp C
T ss_pred c
Confidence 6
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.13 E-value=9.7e-11 Score=107.79 Aligned_cols=56 Identities=25% Similarity=0.551 Sum_probs=46.7
Q ss_pred ccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCC
Q 003132 118 VICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178 (845)
Q Consensus 118 ~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~ 178 (845)
+.|.++..|.+|+... .+.+.||+||.|+++||++|++|++..+|.+.|+|+.|+.
T Consensus 56 W~C~~C~~C~vC~~~~-----~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 56 WQCIECKTCSSCRDQG-----KNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCCTTTCCBTTTCCCC-----CTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred cccccCCccccccCcC-----CCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 5666677799996331 2345699999999999999999999999999999999975
No 4
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.12 E-value=2.6e-11 Score=112.05 Aligned_cols=56 Identities=29% Similarity=0.632 Sum_probs=46.4
Q ss_pred ccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 118 VICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 118 ~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.|..+..|.+|+.. ++.+.||+||.|+++||++|++|++..+|.++|+|+.|...
T Consensus 53 W~C~~C~~C~~C~~~------~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 53 WQCIECKSCILCGTS------ENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCCGGGCCCTTTTCC------TTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCccccCccCccccc------CCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 455556678999643 23457999999999999999999999999999999999755
No 5
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=1.3e-10 Score=97.45 Aligned_cols=51 Identities=29% Similarity=0.535 Sum_probs=45.2
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
..+...|+||++.+.++..+.+|+|.||..||..|+.....||+||..+..
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 12 LTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCS
T ss_pred cCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCc
Confidence 345689999999999877777899999999999999888999999988764
No 6
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.02 E-value=8.7e-11 Score=97.02 Aligned_cols=53 Identities=28% Similarity=0.521 Sum_probs=44.7
Q ss_pred Ccccccccccccccccc------eeecCCCCcccHhHHHhhhccCCCCCCccCccceee
Q 003132 21 NFECGRCGICMDVVIDR------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
..++..|+||++.+.++ ....+|+|.||..||..|+.....||+||..+....
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 65 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCS
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhh
Confidence 44568999999998764 267789999999999999998899999999887443
No 7
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.01 E-value=1.1e-10 Score=93.32 Aligned_cols=49 Identities=29% Similarity=0.687 Sum_probs=42.0
Q ss_pred CCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 125 GCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 125 ~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
.|.+|+.. ++.+.||+||.|+++||++|++|++..+|.++|+|+.|...
T Consensus 2 ~C~vC~~~------~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKK------GEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCS------SCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCC------CCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 48899543 23457999999999999999999999999999999999764
No 8
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=1.2e-10 Score=104.46 Aligned_cols=56 Identities=29% Similarity=0.616 Sum_probs=47.3
Q ss_pred ccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 118 VICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 118 ~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.+.+...|.+|+.. ++.+.||+||.|+++||++|++|++..+|.++|+|+.|...
T Consensus 11 ~~~~~~~~C~vC~~~------~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 11 AQFIDSYICQVCSRG------DEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCSSSCCS------GGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hhccCCCCCccCCCc------CCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 355667789999643 23457999999999999999999999999999999999765
No 9
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.99 E-value=2.9e-10 Score=93.52 Aligned_cols=51 Identities=29% Similarity=0.747 Sum_probs=44.8
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCcccee
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLI 72 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I 72 (845)
..+..|+||++.+.++....+|+|.||..||..|+.....||+||..+..+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 53 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCE
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhh
Confidence 346789999999988667778999999999999999889999999888654
No 10
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=2.1e-10 Score=93.78 Aligned_cols=53 Identities=30% Similarity=0.560 Sum_probs=44.2
Q ss_pred cccCcccccccccccccccc------eeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 18 DLLNFECGRCGICMDVVIDR------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 18 DssssEd~~CpICLE~f~d~------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
.....+...|+||++.+.++ ..+.+|+|.||..||..|+.....||+||..+.
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 9 GLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp CCCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred ccCCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 33445678999999998754 266789999999999999998899999998765
No 11
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=3.2e-10 Score=94.75 Aligned_cols=53 Identities=26% Similarity=0.677 Sum_probs=44.9
Q ss_pred cccCcccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 18 DLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 18 DssssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.....+...|+||++.+.++..+ +|+|.||..||..|+.....||+||..+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 9 TAPSLTVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp CCSSSSCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred cccCCCCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 34445678999999999886555 599999999999999988999999988764
No 12
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.98 E-value=2.8e-10 Score=89.98 Aligned_cols=48 Identities=29% Similarity=0.695 Sum_probs=40.8
Q ss_pred cccccccccccccc---ceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 23 ECGRCGICMDVVID---RGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 23 Ed~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
++..|+||++.+.+ ...++.|+|.||..||..|+.....||+||..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45789999999865 3455569999999999999999999999998763
No 13
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.98 E-value=3.7e-10 Score=95.42 Aligned_cols=56 Identities=20% Similarity=0.343 Sum_probs=45.4
Q ss_pred ccccCcccccccccccccccc--eeecCCCCcccHhHHHhhhccCCCCCCccCcccee
Q 003132 17 NDLLNFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLI 72 (845)
Q Consensus 17 ~DssssEd~~CpICLE~f~d~--~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I 72 (845)
.+........|+||++.|.+. ....+|+|.||..||..|+.....||+||..+...
T Consensus 8 ~~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 8 TEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQ 65 (78)
T ss_dssp CCTTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCS
T ss_pred CcccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCc
Confidence 344455678999999998643 44567999999999999999889999999987643
No 14
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.98 E-value=3.2e-10 Score=97.14 Aligned_cols=58 Identities=24% Similarity=0.760 Sum_probs=48.8
Q ss_pred cccccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCC-cccCCcCCCC
Q 003132 115 ENAVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCED-TWLCPRCVAE 179 (845)
Q Consensus 115 ee~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPeg-dW~CP~Cr~~ 179 (845)
...+.|... .|.+|+.. ++.+.||+||+|+++||++|++|++..+|.| +|+|+.|...
T Consensus 11 ~~~w~C~~C-~C~~C~~~------~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 11 DVNRLCRVC-ACHLCGGR------QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp CTTSCCTTT-SBTTTCCC------SCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCCeECCCC-CCcCCCCc------CCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 345678777 89999644 2345799999999999999999999999999 9999999864
No 15
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=3e-10 Score=98.15 Aligned_cols=51 Identities=37% Similarity=0.821 Sum_probs=43.0
Q ss_pred ccccccccccccccc--------------ceeecCCCCcccHhHHHhhhccCCCCCCccCcccee
Q 003132 22 FECGRCGICMDVVID--------------RGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLI 72 (845)
Q Consensus 22 sEd~~CpICLE~f~d--------------~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I 72 (845)
.+++.|+||++.|.+ ...++.|+|.||..||.+|+....+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 356789999998854 346667999999999999999999999999987653
No 16
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=4.7e-10 Score=97.94 Aligned_cols=55 Identities=25% Similarity=0.778 Sum_probs=46.9
Q ss_pred cccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCC-cccCCcCCC
Q 003132 117 AVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCED-TWLCPRCVA 178 (845)
Q Consensus 117 ~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPeg-dW~CP~Cr~ 178 (845)
.+.|.+. .|.+|+.. ++.+.||+||.|+++||++|++||+..+|.+ +|+|+.|..
T Consensus 21 ~w~C~~c-~C~vC~~~------~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 21 EKKCHSC-SCRVCGGK------HEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCCSSS-SCSSSCCC------CCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CeECCCC-CCcCcCCc------CCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 4677666 89999643 2345799999999999999999999999999 999999975
No 17
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.96 E-value=4.1e-10 Score=93.09 Aligned_cols=52 Identities=23% Similarity=0.619 Sum_probs=43.2
Q ss_pred cCcccccccccccccc--cceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 20 LNFECGRCGICMDVVI--DRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 20 sssEd~~CpICLE~f~--d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.......|+||++.|. ......+|+|.||..||..|+.....||+||..+..
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEA 63 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCS
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccC
Confidence 3445678999999885 335666799999999999999988899999988764
No 18
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.96 E-value=4.1e-10 Score=98.44 Aligned_cols=58 Identities=26% Similarity=0.772 Sum_probs=48.7
Q ss_pred ccccccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCc-ccCCcCCC
Q 003132 114 DENAVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDT-WLCPRCVA 178 (845)
Q Consensus 114 Dee~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegd-W~CP~Cr~ 178 (845)
|...+.|..+ .|.+|+.. ++.+.||+||.|+++||++|++|++..+|.+. |+|+.|+.
T Consensus 18 ~~~~W~C~~C-~C~vC~~~------~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 18 DDVNRLCRVC-ACHLCGGR------QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TCTTSCCTTT-SBTTTCCC------SCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCCCCCC-cCCccCCC------CCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 3345788888 89999644 34567999999999999999999999999999 99999975
No 19
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.94 E-value=4.8e-10 Score=94.70 Aligned_cols=51 Identities=27% Similarity=0.551 Sum_probs=42.4
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhccC--CCCCCccCccc
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT--NLCPLCQGEFQ 70 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s--nsCPlCR~~f~ 70 (845)
...+...|+||++.+.++..+..|+|+||..||..|+... ..||+||..+.
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 11 PIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred cCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 3445789999999999876655599999999999999754 68999998654
No 20
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.94 E-value=1.1e-09 Score=98.15 Aligned_cols=49 Identities=16% Similarity=0.503 Sum_probs=42.9
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
....|.+|+.. +.||+||.|+++||++|+.|++..+|.++|+|+.|...
T Consensus 24 n~~~C~vC~~~---------g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 24 SATICRVCQKP---------GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSCCSSSCSS---------SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCcCcCcCCC---------CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 45679999533 24899999999999999999999999999999999876
No 21
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=6.1e-10 Score=95.08 Aligned_cols=50 Identities=24% Similarity=0.430 Sum_probs=43.1
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
.......|+||++.+.++. +.+|+|+||..||..|+.....||+||..+.
T Consensus 11 ~~~~~~~C~IC~~~~~~p~-~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 11 EEEIPFRCFICRQAFQNPV-VTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCCSBCSSSCSBCCSEE-ECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred cCCCCCCCcCCCchhcCee-EccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 3445679999999998855 4679999999999999988889999998875
No 22
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.93 E-value=2e-10 Score=92.64 Aligned_cols=50 Identities=30% Similarity=0.581 Sum_probs=42.6
Q ss_pred ccccccccccccccc------eeecCCCCcccHhHHHhhhccCCCCCCccCcccee
Q 003132 23 ECGRCGICMDVVIDR------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLI 72 (845)
Q Consensus 23 Ed~~CpICLE~f~d~------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I 72 (845)
++..|+||++.+.++ ....+|+|.||..||..|+.....||+||..+...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 357899999998654 26677999999999999999889999999887643
No 23
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.92 E-value=6.7e-10 Score=92.95 Aligned_cols=53 Identities=23% Similarity=0.533 Sum_probs=43.1
Q ss_pred Ccccccccccccccccc--eeecCCCCcccHhHHHhhhccCCCCCCccCccceee
Q 003132 21 NFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~--~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
...+..|+||++.+... ....+|+|.||..||..|+.....||+||..+..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLA 66 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCC
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccc
Confidence 34567999999998643 334469999999999999998889999998876533
No 24
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.91 E-value=1.1e-09 Score=91.34 Aligned_cols=48 Identities=27% Similarity=0.717 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.||+||.|+++||++|++|++..+|.++|+|+.|...
T Consensus 9 ~~~C~vC~~~---------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 9 MEFCRVCKDG---------GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCTTTCCC---------SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCcCCCCCCC---------CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 4568999521 35999999999999999999999999999999999877
No 25
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.91 E-value=5.8e-10 Score=88.00 Aligned_cols=48 Identities=23% Similarity=0.522 Sum_probs=41.4
Q ss_pred cccccccccccccc---ceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 23 ECGRCGICMDVVID---RGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 23 Ed~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
.+..|+||++.+.+ .....+|+|.||..||..|+.....||+||..+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 45789999999854 3677779999999999999988899999998763
No 26
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.90 E-value=4.3e-10 Score=105.58 Aligned_cols=48 Identities=31% Similarity=0.769 Sum_probs=41.9
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
++..|+||++.+.+++++ +|+|+||..||..|+.....||+||..+..
T Consensus 52 ~~~~C~iC~~~~~~~~~~-~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTL-NCAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HHSBCTTTCSBCSSEEEE-TTSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred ccCCCcccCcccCCceEC-CCCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 346899999999886555 699999999999999999999999988764
No 27
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.88 E-value=5.1e-10 Score=99.89 Aligned_cols=50 Identities=38% Similarity=0.823 Sum_probs=43.4
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccC-CCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT-NLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s-nsCPlCR~~f~~ 71 (845)
.+...|+||++.|.++..+.+|+|.||..||..|+... ..||+||..+..
T Consensus 20 ~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 20 AEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 35678999999999866657899999999999999876 699999998753
No 28
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=90.32 Aligned_cols=50 Identities=30% Similarity=0.611 Sum_probs=41.9
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhc---cCCCCCCccCccce
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST---ITNLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk---~snsCPlCR~~f~~ 71 (845)
..+...|+||++.+.++..+ +|+|.||..||..|.. ....||+||..+..
T Consensus 17 ~~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 17 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred CccCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 34568999999999886555 7999999999999986 45689999988753
No 29
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.88 E-value=6.8e-10 Score=93.49 Aligned_cols=50 Identities=28% Similarity=0.600 Sum_probs=42.2
Q ss_pred Ccccccccccccccccc--eeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~--~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
..++..|+||++.|... ....+|+|.||..||..|+.....||+||..+.
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 44567999999998654 355569999999999999999899999998775
No 30
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.87 E-value=1.2e-09 Score=94.86 Aligned_cols=50 Identities=28% Similarity=0.567 Sum_probs=41.7
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhcc--CCCCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI--TNLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~--snsCPlCR~~f~ 70 (845)
..+...|+||++.|.++.+++.|+|+||..||..|+.. ...||+||..+.
T Consensus 10 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 10 IPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 34578999999999987666559999999999999864 368999998863
No 31
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.87 E-value=1.1e-09 Score=100.17 Aligned_cols=50 Identities=30% Similarity=0.780 Sum_probs=43.0
Q ss_pred cccccccccccccccc-----------------eeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDR-----------------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~-----------------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+++.|+||++.|.+. ..+++|+|.||..||..|+..+.+||+||..|.+
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 4568999999998653 3556799999999999999999999999998764
No 32
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.86 E-value=7.7e-10 Score=97.74 Aligned_cols=49 Identities=27% Similarity=0.649 Sum_probs=43.7
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
+...|+||++.+.++..+.+|+|+||..||..|......||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 4678999999999877776899999999999999988999999988763
No 33
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.86 E-value=9.5e-10 Score=93.46 Aligned_cols=48 Identities=17% Similarity=0.387 Sum_probs=41.7
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.||+||.|+++||++|++|++..+|.+.|||+.|...
T Consensus 12 ~~~C~vC~~~---------~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG---------TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC---------TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCCC---------CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4569999522 34899999999999999999999999999999999866
No 34
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.86 E-value=1.2e-09 Score=98.53 Aligned_cols=49 Identities=27% Similarity=0.505 Sum_probs=40.1
Q ss_pred ccccccccccccccc-----------------eeecCCCCcccHhHHHhhh-----ccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDR-----------------GVLDCCQHWFCFACIDNWS-----TITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~-----------------~iL~~CgHtFC~sCI~~Wl-----k~snsCPlCR~~f~~ 71 (845)
.+..|+|||+.|.++ +.+.+|+|.||..||..|+ .....||+||..|..
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCC
Confidence 356899999998542 2367899999999999999 456789999988764
No 35
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.86 E-value=1e-09 Score=98.49 Aligned_cols=50 Identities=26% Similarity=0.580 Sum_probs=44.5
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+...|+||++.+.++..+.+|+|+||..||..|+.....||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 34679999999999977776899999999999999988999999988764
No 36
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.85 E-value=9.3e-10 Score=91.71 Aligned_cols=49 Identities=35% Similarity=0.752 Sum_probs=42.2
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
....|.+|+.. +.||+||.|+++||++|++|++..+|.++|+|+.|...
T Consensus 10 ~~~~C~vC~~~---------g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 10 HQDYCEVCQQG---------GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CCSSCTTTSCC---------SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred CCCCCccCCCC---------CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 45679999532 35999999999999999999998899999999999765
No 37
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.85 E-value=8.3e-10 Score=91.45 Aligned_cols=48 Identities=38% Similarity=0.820 Sum_probs=42.1
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+...|+||++.+.+ +..+|+|.||..||..|+.....||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~--~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (70)
T 2ecn_A 13 TDEEECCICMDGRAD--LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTG 60 (70)
T ss_dssp CCCCCCSSSCCSCCS--EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTC
T ss_pred CCCCCCeeCCcCccC--cccCCCCcccHHHHHHHHHCcCcCCCcCCcccC
Confidence 456799999999888 555699999999999999999999999988764
No 38
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.84 E-value=1.4e-09 Score=95.57 Aligned_cols=50 Identities=24% Similarity=0.566 Sum_probs=41.4
Q ss_pred Cccccccccccccccc--ceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 21 NFECGRCGICMDVVID--RGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d--~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
...+..|+||++.|.. .....+|+|.||..||..|+.....||+||..+.
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 3456789999998854 2444559999999999999999999999998765
No 39
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=88.38 Aligned_cols=49 Identities=22% Similarity=0.466 Sum_probs=41.4
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhc-cCCCCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST-ITNLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk-~snsCPlCR~~f~ 70 (845)
..+...|+||++.+.++.. .+|+|+||..||..|.. ....||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 61 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQ-TECGHRFCESCMAALLSSSSPKCTACQESIV 61 (66)
T ss_dssp CCCCEECTTTCCEESSCCC-CSSSCCCCHHHHHHHHTTSSCCCTTTCCCCC
T ss_pred CCcCCCCCCCChHhcCeeE-CCCCCHHHHHHHHHHHHhCcCCCCCCCcCCC
Confidence 3456899999999988655 57999999999999994 5678999998875
No 40
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.84 E-value=1e-09 Score=92.54 Aligned_cols=48 Identities=25% Similarity=0.621 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.||+||.|+++||++|++|++..+|.+.|+|+.|...
T Consensus 8 ~~~C~vC~~~---------g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 8 EDECAVCRDG---------GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCSBSSSSCC---------SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCccCCCC---------CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 4578999532 35999999999999999999999999999999999876
No 41
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.83 E-value=9e-10 Score=97.98 Aligned_cols=53 Identities=21% Similarity=0.508 Sum_probs=43.4
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC----CCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG----TCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~----vPegdW~CP~Cr~~ 179 (845)
...|.+|+... ..+.+.||+||.|+++||++|++|++.. +|.+.|+|+.|...
T Consensus 16 ~~~C~vC~~~~----~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 16 GLACVVCRQMT----VASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CCSCSSSCCCC----CCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred CCcCCCCCCCC----CCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 45799996442 1223579999999999999999999874 89999999999876
No 42
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.83 E-value=1.2e-09 Score=90.30 Aligned_cols=48 Identities=29% Similarity=0.702 Sum_probs=41.8
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.||+||.|+++||++|++|++..+|.+.|+|+.|...
T Consensus 5 ~~~C~vC~~~---------g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKS---------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCC---------SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCCC---------CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 4579999532 35999999999999999999999999999999999765
No 43
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.83 E-value=1.4e-09 Score=89.03 Aligned_cols=47 Identities=30% Similarity=0.705 Sum_probs=40.6
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~ 178 (845)
...|.+|+.. +.||+||.|+++||++|++|++..+|.+.|+|+.|..
T Consensus 9 ~~~C~vC~~~---------g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKS---------GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCS---------SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCccCCCC---------CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 4568999532 3599999999999999999999999999999999964
No 44
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=3.2e-09 Score=90.86 Aligned_cols=51 Identities=27% Similarity=0.597 Sum_probs=41.5
Q ss_pred Cccccccccccccccc---ceeecCCCCcccHhHHHhhhccC---CCCCCccCccce
Q 003132 21 NFECGRCGICMDVVID---RGVLDCCQHWFCFACIDNWSTIT---NLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~Wlk~s---nsCPlCR~~f~~ 71 (845)
..+...|+||++.|.+ .++..+|+|+||..||..|.... ..||+||..+..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred ccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 3456789999999876 14455799999999999998765 789999988653
No 45
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.81 E-value=1.9e-09 Score=90.70 Aligned_cols=49 Identities=29% Similarity=0.634 Sum_probs=41.6
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhcc-------CCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-------TNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-------snsCPlCR~~f~~ 71 (845)
.+...|+||++.+.++..+ +|+|+||..||..|... ...||+||..+..
T Consensus 10 ~~~~~C~IC~~~~~~p~~l-~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLSL-DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECSSCCCC-SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccCCeeEC-CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 4568999999999886554 69999999999999876 6789999988763
No 46
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.81 E-value=2e-09 Score=90.89 Aligned_cols=49 Identities=20% Similarity=0.375 Sum_probs=42.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~~ 71 (845)
.+...|+||++.+.+++++ +|+|+||..||..|+.. ...||+||..+..
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~-~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIV-STGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEE-TTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred cccCCCCCccccccCCEEc-CCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 4568999999999886665 59999999999999976 7889999988753
No 47
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.81 E-value=3.5e-09 Score=89.47 Aligned_cols=49 Identities=29% Similarity=0.596 Sum_probs=41.6
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhcc------CCCCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI------TNLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~------snsCPlCR~~f~ 70 (845)
..+...|+||++.+.++.. .+|+|+||..||..|... ...||+||..+.
T Consensus 16 ~~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 16 IKEEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CCTTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred CccCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 3456899999999988654 569999999999999876 678999998875
No 48
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.80 E-value=2.3e-09 Score=110.20 Aligned_cols=56 Identities=25% Similarity=0.784 Sum_probs=42.3
Q ss_pred cccccCCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCC-cccCCcCCCC
Q 003132 117 AVICLDGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCED-TWLCPRCVAE 179 (845)
Q Consensus 117 ~~iClD~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPeg-dW~CP~Cr~~ 179 (845)
.+.|.++ .|.+|+.. ++.+.||+||+|+++||++|++||+..+|.| .|+|+.|...
T Consensus 169 ~w~C~~c-~C~vC~~~------~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 169 NRLCRVC-ACHLCGGR------QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TSCCTTT-SCSSSCCC------CC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CEecCCC-CCcCCCCC------CCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 3556555 79999643 2345799999999999999999999999999 9999999764
No 49
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.80 E-value=1e-09 Score=91.79 Aligned_cols=53 Identities=26% Similarity=0.655 Sum_probs=42.8
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC--C-CCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG--T-CEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~--v-PegdW~CP~Cr~~ 179 (845)
...|.+|+... ..+.+.||+||.|+++||++|++|++.. + |.+.|+|+.|...
T Consensus 6 ~~~C~vC~~~~----~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 6 SGVCTICQEEY----SEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCBSSSCCCC----CBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCC----CCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 45799996442 1234679999999999999999999765 3 8899999999876
No 50
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.80 E-value=4.2e-09 Score=85.73 Aligned_cols=44 Identities=34% Similarity=0.693 Sum_probs=37.7
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhc---cCCCCCCc
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST---ITNLCPLC 65 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk---~snsCPlC 65 (845)
..++..|+||++.+.++..+ +|+|+||..||..|+. ....||+|
T Consensus 17 ~~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 17 LQEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCBCTTTCSBCSSCEEC-TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred CccCCCCCcCCchhCCeEEe-CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 45578999999999886665 7999999999999987 45689998
No 51
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=5.1e-09 Score=88.43 Aligned_cols=50 Identities=30% Similarity=0.630 Sum_probs=42.2
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhcc------CCCCCCccCccce
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI------TNLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~------snsCPlCR~~f~~ 71 (845)
..+...|+||++.+.++..+ +|+|+||..||..|... ...||+||..+..
T Consensus 16 ~~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 16 VKEEVTCPICLELLTQPLSL-DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCTTTCSCCSSCBCC-SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred ccCCCCCCCCCcccCCceeC-CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 34568999999999886555 69999999999999866 7889999988763
No 52
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.76 E-value=1.6e-09 Score=93.18 Aligned_cols=51 Identities=31% Similarity=0.639 Sum_probs=41.6
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+... ..+.+.||+||.|+++||++|++|+. +|+++|||+.|...
T Consensus 16 ~~~C~vC~~~~----s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 16 DAVCSICMDGE----SQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 66 (71)
T ss_dssp SCSCSSSCCCC----CCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCC----CCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCc
Confidence 45799996431 12456799999999999999999985 89999999999765
No 53
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.76 E-value=3.3e-09 Score=87.03 Aligned_cols=49 Identities=20% Similarity=0.503 Sum_probs=39.7
Q ss_pred cccccccccc-ccccce---eecCCCCcccHhHHHhhhc-cCCCCCCccCccce
Q 003132 23 ECGRCGICMD-VVIDRG---VLDCCQHWFCFACIDNWST-ITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE-~f~d~~---iL~~CgHtFC~sCI~~Wlk-~snsCPlCR~~f~~ 71 (845)
++..|+||++ .+.++. .+.+|||+||..||..|.. ....||+||..+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 4578999999 776653 4668999999999999954 45689999988764
No 54
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.75 E-value=2.5e-09 Score=98.24 Aligned_cols=49 Identities=27% Similarity=0.503 Sum_probs=40.9
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccC-CCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT-NLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s-nsCPlCR~~f~~ 71 (845)
.+...|+||++.+.++..+ +|+|+||..||..|.... ..||+||..+..
T Consensus 50 ~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITT-VCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHTBCTTTSSBCSSEEEC-TTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred ccCCCCCcCChHHcCcEEe-eCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 3457899999999886555 699999999999998754 489999988753
No 55
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=6.6e-09 Score=82.53 Aligned_cols=45 Identities=29% Similarity=0.696 Sum_probs=37.1
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhh---ccCCCCCCc
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS---TITNLCPLC 65 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl---k~snsCPlC 65 (845)
...+...|+||++.+.++.. .+|+|.||..||..|+ .....||+|
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVI-IECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCC-CSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccccCCCCccCCcccCccEe-CCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 34456899999999988655 5699999999999994 456789998
No 56
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.74 E-value=2.8e-09 Score=96.58 Aligned_cols=52 Identities=25% Similarity=0.703 Sum_probs=43.7
Q ss_pred ccCcccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccce
Q 003132 19 LLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQL 71 (845)
Q Consensus 19 ssssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~~ 71 (845)
....++..|+||++.+.++.++ +|+|+||..||..|... ...||+||..+..
T Consensus 10 ~~~~~~~~C~iC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 10 IPSLSECQCGICMEILVEPVTL-PCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp CCCHHHHBCTTTCSBCSSCEEC-TTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred cCCCCCCCCccCCcccCceeEc-CCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 3445578999999999886666 69999999999999866 6789999998864
No 57
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.74 E-value=2.7e-09 Score=102.42 Aligned_cols=48 Identities=27% Similarity=0.588 Sum_probs=42.5
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccc
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQ 70 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~ 70 (845)
....|+||++.|.++..+.+|+|+||..||..|+.. ...||+||..+.
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLV 101 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCC
Confidence 456899999999997777789999999999999986 778999998875
No 58
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.74 E-value=3.2e-09 Score=91.00 Aligned_cols=50 Identities=34% Similarity=0.751 Sum_probs=42.2
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
..|.+|+.. ++.+.||+||.|+.|||++|++++....+.+.|+|+.|...
T Consensus 19 ~~C~~C~~~------~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 19 WICPGCNKP------DDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp ECBTTTTBC------CSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred cCCCCCCCC------CCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 468899543 23357999999999999999999988888899999999876
No 59
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.71 E-value=2.5e-09 Score=95.32 Aligned_cols=51 Identities=31% Similarity=0.639 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+... ..+.+.||+||.|+.+||++|++|+. +|.+.|||+.|...
T Consensus 25 ~~~C~vC~~~~----s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 25 DAVCSICMDGE----SQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCSSCCSSS----SCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CCcCCcCCCCC----CCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCc
Confidence 45799996431 12446799999999999999999986 89999999999876
No 60
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.70 E-value=9.4e-09 Score=89.87 Aligned_cols=49 Identities=10% Similarity=-0.130 Sum_probs=43.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+.+.|+||++.+.+++++. |||+||..||..|+.....||+|+..+..
T Consensus 12 p~~~~CpI~~~~m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRLP-SGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp CTTTBCTTTCSBCSSEEECT-TSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred chheECcccCchhcCCeECC-CCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 45789999999999976666 99999999999999888899999987753
No 61
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.69 E-value=2.2e-09 Score=100.36 Aligned_cols=49 Identities=31% Similarity=0.789 Sum_probs=1.0
Q ss_pred ccccccccccccccc-----------------eeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDR-----------------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~-----------------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.++.|+||++.|.+. ....+|+|.||..||..|+....+||+||..|.+
T Consensus 47 ~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 47 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 112 (117)
T ss_dssp CC----------------------------------------------------------------
T ss_pred CCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeee
Confidence 457999999998652 2335799999999999999999999999998764
No 62
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.69 E-value=8.4e-09 Score=103.50 Aligned_cols=48 Identities=19% Similarity=0.465 Sum_probs=42.4
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.|++||+|+++||.+|++|++..+|.|.|+|+.|...
T Consensus 7 ~~~C~~C~~~---------g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 7 EDWCAVCQNG---------GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp CSSBTTTCCC---------EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCC---------CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 4579999533 24899999999999999999999999999999999987
No 63
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.67 E-value=1.2e-08 Score=100.36 Aligned_cols=48 Identities=19% Similarity=0.478 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.+++||+|+++||.+|++|++..+|.|.|+|+.|...
T Consensus 4 ~~~C~~C~~~---------g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 4 EDWCAVCQNG---------GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp CSSCTTTCCC---------SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCccccCCCC---------CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 3569999532 23899999999999999999999999999999999987
No 64
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.65 E-value=1.7e-08 Score=91.09 Aligned_cols=49 Identities=10% Similarity=-0.112 Sum_probs=43.4
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+.+.||||++.+.+++++. |||+||..||..|+.....||+|+..+..
T Consensus 27 p~~~~CpI~~~~m~dPV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRLP-SGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp STTTBCTTTCSBCSSEEEET-TTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred cHhhCCcCccCcccCCeECC-CCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 45789999999999977776 99999999999999888899999988753
No 65
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.63 E-value=9.4e-09 Score=91.79 Aligned_cols=48 Identities=25% Similarity=0.681 Sum_probs=40.1
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhccC---CCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT---NLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s---nsCPlCR~~f~~ 71 (845)
+...|+||++.+.++.. .+|+|.||..||..|.... ..||+||..+..
T Consensus 20 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVS-TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCB-CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEE-CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 35689999999988655 4699999999999998764 489999987763
No 66
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.63 E-value=8.2e-09 Score=94.23 Aligned_cols=47 Identities=26% Similarity=0.626 Sum_probs=41.1
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
.+...|+||++.|.+++.+.+|+|+||..||..|.. ..||+||..+.
T Consensus 20 ~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 20 EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred hhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 346799999999998777757999999999999987 78999998874
No 67
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.62 E-value=1.1e-08 Score=98.15 Aligned_cols=48 Identities=21% Similarity=0.478 Sum_probs=40.8
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhccCC-CCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITN-LCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~sn-sCPlCR~~f~~ 71 (845)
+...|+||++.|.++.+ .+|+|+||..||..|+.... .||+||..+..
T Consensus 77 ~~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVT-TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQ 125 (150)
T ss_dssp HHTBCTTTSSBCSSEEE-CTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCEeecCChhhcCCEE-cCCCCchhHHHHHHHHHhCCCcCCCCCccCCC
Confidence 45789999999988655 57999999999999997654 89999988764
No 68
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.59 E-value=3.2e-08 Score=89.53 Aligned_cols=49 Identities=33% Similarity=0.742 Sum_probs=39.3
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...| +|+.. ++.+.||.||.|+.|||..|++++...+|+ .|+|+.|+..
T Consensus 28 ~vrC-iC~~~------~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFT------HDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCC------SCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSS
T ss_pred CEEe-ECCCc------cCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCC
Confidence 3457 78533 234579999999999999999999877774 8999999866
No 69
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.59 E-value=2.7e-08 Score=99.14 Aligned_cols=48 Identities=17% Similarity=0.510 Sum_probs=42.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+.. +.+++||+|+++||++|+.|++..+|.|.|+|+.|...
T Consensus 2 ~~~C~~C~~~---------g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---------GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---------SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---------CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 3569999533 24899999999999999999999999999999999877
No 70
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.59 E-value=3e-08 Score=89.22 Aligned_cols=49 Identities=12% Similarity=-0.030 Sum_probs=42.6
Q ss_pred cccccccccccccccceeecCCC-CcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQ-HWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~Cg-HtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
.+++.|+||++.+.+++++. |+ |+||+.||..|+.....||+|+..+..
T Consensus 20 p~~~~CpI~~~~m~dPV~~~-cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 20 CDEFLDPIMSTLMCDPVVLP-SSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp CTTTBCTTTCSBCSSEEECT-TTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred cHhcCCcCccccccCCeECC-CCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 45789999999999976654 88 999999999999888899999988753
No 71
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.58 E-value=1.4e-08 Score=91.99 Aligned_cols=53 Identities=28% Similarity=0.530 Sum_probs=44.6
Q ss_pred Ccccccccccccccccc------eeecCCCCcccHhHHHhhhccCCCCCCccCccceee
Q 003132 21 NFECGRCGICMDVVIDR------GVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~------~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
......|+||++.+.+. .+...|+|.||..||..|+....+||+||..+..-.
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhc
Confidence 45678899999998653 266679999999999999999999999999876544
No 72
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.58 E-value=2.2e-08 Score=91.53 Aligned_cols=51 Identities=24% Similarity=0.325 Sum_probs=42.3
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhccCC-CCCCccCccce
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITN-LCPLCQGEFQL 71 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~sn-sCPlCR~~f~~ 71 (845)
.-.+...|+||++.+.++..+ +|+|+||..||..|+.... .||+||..+..
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~-~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQT-PCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEEC-TTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCcCChhhcCeEEC-CcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 445568999999999886554 6999999999999987654 89999987753
No 73
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.53 E-value=2.4e-08 Score=90.55 Aligned_cols=48 Identities=27% Similarity=0.612 Sum_probs=41.4
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~~ 71 (845)
+...|+||++.+.++.. .+|+|+||..||..|+.. ...||+||..+..
T Consensus 22 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHILADPVE-TSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHhcCcEE-cCCCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 46789999999988655 579999999999999976 6789999988764
No 74
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.52 E-value=3.9e-08 Score=87.20 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=40.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhcc------CCCCCC--ccCc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI------TNLCPL--CQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~------snsCPl--CR~~ 68 (845)
.+.+.||||++.|.+++++..|+|+||..||..|+.. ...||+ |+..
T Consensus 5 ~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 5 SSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4578999999999997777669999999999999864 358999 9865
No 75
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.50 E-value=7.1e-08 Score=83.69 Aligned_cols=50 Identities=20% Similarity=0.415 Sum_probs=38.1
Q ss_pred ccccccccccccccc-ceeec--CCCCcccHhHHHhhh-ccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVID-RGVLD--CCQHWFCFACIDNWS-TITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d-~~iL~--~CgHtFC~sCI~~Wl-k~snsCPlCR~~f~~ 71 (845)
.++..|+||++.+.. ..... +|||.||..||..+. .....||+||..+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCC
Confidence 456799999998842 12222 499999999999865 446789999988763
No 76
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.50 E-value=5.1e-08 Score=98.53 Aligned_cols=50 Identities=6% Similarity=-0.011 Sum_probs=41.7
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccce
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~~ 71 (845)
....+.|+||++.+.++++++ |||+||..||..|... ...||+|+..+..
T Consensus 205 ~~~~~~c~i~~~~~~dPv~~~-~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 205 IPDYLCGKISFELMREPCITP-SGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp CCSTTBCTTTCSBCSSEEECS-SCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred CCcccCCcCcCCHhcCCeECC-CCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 345789999999999976655 9999999999999875 4459999988753
No 77
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.49 E-value=3.1e-08 Score=79.94 Aligned_cols=45 Identities=29% Similarity=0.683 Sum_probs=37.3
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQ 70 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~ 70 (845)
.+...|+||++.+.++..+ +|+|+||..||..| ...||+||..+.
T Consensus 4 ~~~~~C~IC~~~~~~p~~l-~CgH~fC~~Ci~~~---~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLL-PCLHTLCSGCLEAS---GMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCS-TTSCCSBTTTCSSS---SSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEc-CCCCcccHHHHccC---CCCCCcCCcEee
Confidence 3467899999999886554 59999999999884 567999998875
No 78
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=1.5e-07 Score=81.69 Aligned_cols=52 Identities=17% Similarity=0.472 Sum_probs=43.1
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhccC--CCCCCccCccce
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT--NLCPLCQGEFQL 71 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s--nsCPlCR~~f~~ 71 (845)
.......|+||++.|........|+|.||..||.+|++.. ..||+||..+..
T Consensus 11 y~~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 11 YPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp CSSSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred ccCCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 3444579999999997655666899999999999999876 889999987653
No 79
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.45 E-value=7.9e-08 Score=81.64 Aligned_cols=46 Identities=30% Similarity=0.628 Sum_probs=39.1
Q ss_pred ccccccccccccccceeecCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
++..|+||++.+.++..+ +|+|. ||..|+..| ..||+||..+....
T Consensus 23 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 69 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFV-PCGHLVTCKQCAEAV----DKCPMCYTVITFKQ 69 (74)
T ss_dssp HHTBCTTTSSSBCCEEEE-TTCCBCCCHHHHTTC----SBCTTTCCBCSEEE
T ss_pred cCCCCCCCCCCCCCEEEc-CCCChhHHHHhhhcC----ccCCCcCcCccCcE
Confidence 457899999998885554 69999 999999999 78999999887644
No 80
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=9.5e-08 Score=83.45 Aligned_cols=52 Identities=27% Similarity=0.573 Sum_probs=40.6
Q ss_pred Cccccccccccccccc-ceeecCCC-----CcccHhHHHhhhccC--CCCCCccCcccee
Q 003132 21 NFECGRCGICMDVVID-RGVLDCCQ-----HWFCFACIDNWSTIT--NLCPLCQGEFQLI 72 (845)
Q Consensus 21 ssEd~~CpICLE~f~d-~~iL~~Cg-----HtFC~sCI~~Wlk~s--nsCPlCR~~f~~I 72 (845)
..++..|.||++.+.+ ...+.+|. |.||..||.+|+... .+||+||..|...
T Consensus 12 ~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 12 PSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp CTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 4456799999998742 23456786 999999999998764 5899999988643
No 81
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.40 E-value=1.3e-07 Score=103.79 Aligned_cols=50 Identities=26% Similarity=0.686 Sum_probs=42.3
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhc-cCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST-ITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk-~snsCPlCR~~f~~I~ 73 (845)
....|+||++.+.++ +..+|+|.||..||..|.. ....||+||..+....
T Consensus 331 ~~~~C~ICle~~~~p-v~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 331 TFQLCKICAENDKDV-KIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSSBCTTTSSSBCCE-EEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCCccCcCCCCe-EEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 347999999998874 5556999999999999998 6788999999887644
No 82
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.39 E-value=5.7e-08 Score=92.45 Aligned_cols=49 Identities=20% Similarity=0.322 Sum_probs=41.0
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhccCC-CCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITN-LCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~sn-sCPlCR~~f~ 70 (845)
-.+...|+||++.+.+++. .+|+|+||..||..|+.... .||+||..+.
T Consensus 28 l~~~~~C~IC~~~~~~pv~-~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 28 LEAKYLCSACRNVLRRPFQ-AQCGHRYCSFCLASILSSGPQNCAACVHEGI 77 (141)
T ss_dssp CCGGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHGGGSCEECHHHHHTTC
T ss_pred CCcCcCCCCCChhhcCcEE-CCCCCccCHHHHHHHHhcCCCCCCCCCCccc
Confidence 3457899999999988655 57999999999999987654 8999998653
No 83
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.39 E-value=1.3e-07 Score=78.51 Aligned_cols=51 Identities=24% Similarity=0.570 Sum_probs=42.5
Q ss_pred ccccccccccccccceee-cCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVL-DCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL-~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
++..|.||++...+...+ .+|+|. ||..|+..|......||+||..+..+.
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 59 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIV 59 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEE
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceE
Confidence 456899999998885543 379999 899999999988889999999886543
No 84
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.34 E-value=5.1e-07 Score=77.67 Aligned_cols=47 Identities=34% Similarity=0.898 Sum_probs=36.8
Q ss_pred CCCCCCCCCCCccccCCCCccccccCC--CC-ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDS--CD-LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDs--CD-raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...| +|+... + +.||.||. |. .|||+.|+++.. +|.+.||||.|...
T Consensus 16 ~~~C-~C~~~~------~-g~MI~CD~~~C~~~wfH~~Cvgl~~--~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 16 PTYC-LCHQVS------Y-GEMIGCDNPDCSIEWFHFACVGLTT--KPRGKWFCPRCSQE 65 (71)
T ss_dssp CCCS-TTCCCS------C-SSEECCSCSSCSCCCEETTTTTCSS--CCSSCCCCTTTSSC
T ss_pred CCEE-ECCCCC------C-CCEeEeeCCCCCCccEecccCCcCc--CCCCCEECCCCCcc
Confidence 3457 795431 1 46999999 77 699999999764 67899999999877
No 85
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.32 E-value=2.3e-07 Score=76.89 Aligned_cols=51 Identities=25% Similarity=0.608 Sum_probs=41.7
Q ss_pred ccccccccccccccceee-cCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVL-DCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL-~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
....|.||++...+...+ .+|+|. ||..|+..|......||+||..+..+.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i 58 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVI 58 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEE
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceE
Confidence 356899999988774433 479999 999999999887789999999886543
No 86
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.27 E-value=1e-06 Score=79.46 Aligned_cols=48 Identities=33% Similarity=0.898 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCC--CC-ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDS--CD-LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDs--CD-raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+...| +|+... + +.||.||. |. .|||+.|+++.. .|.+.||||.|...
T Consensus 35 e~~yC-iC~~~~------~-g~MI~CD~~dC~~~WfH~~CVgl~~--~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 35 EPTYC-LCHQVS------Y-GEMIGCDNPDCSIEWFHFACVGLTT--KPRGKWFCPRCSQE 85 (91)
T ss_dssp CCBCS-TTCCBC------C-SCCCCCSCSSCSCCCCCSTTTTCSS--CCCSSCCCTTTCCC
T ss_pred CCcEE-ECCCCC------C-CCEeEecCCCCCCCCEecccCCcCc--CCCCCEECcCccCc
Confidence 34567 895431 1 46999999 66 799999999764 67799999999876
No 87
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.25 E-value=3.4e-07 Score=91.17 Aligned_cols=49 Identities=6% Similarity=-0.010 Sum_probs=41.5
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccC-CCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT-NLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s-nsCPlCR~~f~~ 71 (845)
...+.||||++.+.+++++ +|||+||..||..|+... ..||+|+..+..
T Consensus 104 p~~f~CPI~~elm~DPV~~-~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELMREPCIT-PSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBCSSEEEC-TTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cHhhcccCccccCCCCeEC-CCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 4678999999999997666 699999999999998653 469999988754
No 88
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.24 E-value=3.1e-07 Score=88.41 Aligned_cols=51 Identities=24% Similarity=0.327 Sum_probs=42.2
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhcc-CCCCCCccCccce
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI-TNLCPLCQGEFQL 71 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~-snsCPlCR~~f~~ 71 (845)
.-.+...|+||++.+.++.. .+|+|+||..||..|+.. ...||+||..+..
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~-~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCChhhcCcEE-CCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 34456899999999988655 569999999999999865 3489999987754
No 89
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.23 E-value=4.8e-07 Score=95.08 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=43.8
Q ss_pred cCcccccccccccccccceeecCCCCcccHhHHHhhhcc--CCCCCC--ccCccce
Q 003132 20 LNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTI--TNLCPL--CQGEFQL 71 (845)
Q Consensus 20 sssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~--snsCPl--CR~~f~~ 71 (845)
.......||||++.|.++++...|||+||..||..|... ...||+ |+..+..
T Consensus 177 ~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred CCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 346678999999999998887679999999999998764 357999 9987653
No 90
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=4.8e-07 Score=76.75 Aligned_cols=44 Identities=34% Similarity=0.702 Sum_probs=36.0
Q ss_pred ccccccccccccccceeecCCCCc-ccHhHHHhhhccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHW-FCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
+...|+||++.+.++ ++.+|+|. ||..|+... ..||+||..+..
T Consensus 24 ~~~~C~IC~~~~~~~-~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIAI-VFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCCB-CCSSSCCCCBCHHHHHHC----SBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCCE-EEecCCCHHHHHHHhhCC----CCCccCCceecC
Confidence 356899999998884 44569999 999999643 689999998765
No 91
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=1.7e-06 Score=72.90 Aligned_cols=51 Identities=24% Similarity=0.516 Sum_probs=40.5
Q ss_pred cccCcccccccccccccccceeecCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 18 DLLNFECGRCGICMDVVIDRGVLDCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 18 DssssEd~~CpICLE~f~d~~iL~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
+....+...|.||++...+ .++.+|+|. ||..|+.. ...||+||..+....
T Consensus 9 e~~~~~~~~C~IC~~~~~~-~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~~ 60 (68)
T 2ea5_A 9 EPSEENSKDCVVCQNGTVN-WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQESF 60 (68)
T ss_dssp CCSCCCSSCCSSSSSSCCC-CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCEE
T ss_pred cccCCCCCCCCCcCcCCCC-EEEECCCChhhhHHHHhc----CCCCCCCCcchhceE
Confidence 3444557899999999877 566679999 99999984 468999999887543
No 92
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.15 E-value=8.8e-07 Score=79.68 Aligned_cols=46 Identities=26% Similarity=0.663 Sum_probs=35.7
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCC---ccccccccCCCCCCCCCCcccCCc-CCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCD---LWYHAFCVGFDPEGTCEDTWLCPR-CVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCD---raYH~~CLgPpl~~vPegdW~CP~-Cr~~ 179 (845)
..| +|+... . +.||.||.|+ .|||+.|+++.. .|.+.||||. |...
T Consensus 27 ~yC-iC~~~~------~-g~MI~CD~c~C~~eWfH~~CVgl~~--~p~~~W~Cp~cC~~~ 76 (90)
T 2jmi_A 27 VYC-FCRNVS------Y-GPMVACDNPACPFEWFHYGCVGLKQ--APKGKWYCSKDCKEI 76 (90)
T ss_dssp CCS-TTTCCC------S-SSEECCCSSSCSCSCEETTTSSCSS--CTTSCCCSSHHHHHH
T ss_pred cEE-EeCCCC------C-CCEEEecCCCCccccCcCccCCCCc--CCCCCccCChhhcch
Confidence 456 885331 1 3599999977 899999999864 6779999999 9744
No 93
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.15 E-value=3.3e-07 Score=76.27 Aligned_cols=36 Identities=42% Similarity=1.158 Sum_probs=29.9
Q ss_pred ccccccCC--CC-ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 142 DTSIACDS--CD-LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 142 d~mLlCDs--CD-raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.||.||. |. .|||+.|+++.. +|.+.|+||.|...
T Consensus 21 g~mi~CD~cdC~~~wfH~~Cvgl~~--~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 21 GEMIGCDNPDCSIEWFHFACVGLTT--KPRGKWFCPRCSQE 59 (60)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCSS--CCSSCCCCHHHHC-
T ss_pred CCEEEeCCCCCCCceEehhcCCCCc--CCCCCEECcCccCc
Confidence 46999999 55 899999999664 67899999999653
No 94
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.13 E-value=1e-06 Score=81.48 Aligned_cols=46 Identities=24% Similarity=0.515 Sum_probs=38.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccC--CCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACD--SCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCD--sCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.+|+. .+.||+|| .|+++||++|++ +..+|.|+|+||.|...
T Consensus 15 ~~~C~~C~~---------~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 15 EDYCFQCGD---------GGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp CSSCTTTCC---------CSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CCCCCcCCC---------CCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 456899952 13599999 899999999999 45689999999999766
No 95
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.12 E-value=8.2e-07 Score=73.85 Aligned_cols=52 Identities=27% Similarity=0.703 Sum_probs=40.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCC-CCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTC-EDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vP-egdW~CP~Cr~~ 179 (845)
...|.+|+... ++.+.||.||.|+.|||..|+++...... .+.|+|+.|+..
T Consensus 6 ~~~C~~C~~~~-----~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 6 SGQCGACGESY-----AADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCCCSSSCCCC-----CSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCcc-----CCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 35688995432 12357999999999999999999865433 379999999877
No 96
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.10 E-value=4.7e-07 Score=75.28 Aligned_cols=36 Identities=42% Similarity=1.135 Sum_probs=30.5
Q ss_pred ccccccCC--CC-ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 142 DTSIACDS--CD-LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 142 d~mLlCDs--CD-raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.||.||. |. .|||+.|+++.. .|.+.|+||.|...
T Consensus 20 g~mi~CD~~~C~~~wfH~~Cvgl~~--~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 20 GEMIGCDNPDCPIEWFHFACVDLTT--KPKGKWFCPRCVQE 58 (59)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCSS--CCSSCCCCHHHHCC
T ss_pred CCeeEeeCCCCCCCCEecccCCccc--CCCCCEECcCccCc
Confidence 46999999 76 699999999764 67799999999754
No 97
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.09 E-value=1.3e-06 Score=75.61 Aligned_cols=46 Identities=24% Similarity=0.640 Sum_probs=38.0
Q ss_pred ccccccccccccccceeecCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
+...|+||++.+.+. ++.+|+|. ||..|+..| ..||+||..+....
T Consensus 17 ~~~~C~IC~~~~~~~-v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 63 (79)
T 2yho_A 17 EAMLCMVCCEEEINS-TFCPCGHTVCCESCAAQL----QSCPVCRSRVEHVQ 63 (79)
T ss_dssp HHTBCTTTSSSBCCE-EEETTCBCCBCHHHHTTC----SBCTTTCCBCCEEE
T ss_pred CCCEeEEeCcccCcE-EEECCCCHHHHHHHHHhc----CcCCCCCchhhCeE
Confidence 346899999998884 45569999 999999987 38999999887654
No 98
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.07 E-value=5.8e-07 Score=75.44 Aligned_cols=36 Identities=31% Similarity=0.896 Sum_probs=30.8
Q ss_pred ccccccCCCC---ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 142 DTSIACDSCD---LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 142 d~mLlCDsCD---raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.||.||.|+ .|||+.|+++.. .|.+.|+||.|...
T Consensus 22 g~MI~CD~c~C~~~WfH~~Cvgl~~--~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 22 GEMIGCDNEQCPIEWFHFSCVSLTY--KPKGKWYCPKCRGD 60 (62)
T ss_dssp SEEEECSCTTCSSCEEETGGGTCSS--CCSSCCCCHHHHTC
T ss_pred CCeeeeeCCCCCcccEecccCCcCc--CCCCCEECcCcccC
Confidence 3699999955 999999999874 57899999999765
No 99
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.05 E-value=1.4e-06 Score=74.36 Aligned_cols=49 Identities=18% Similarity=0.506 Sum_probs=38.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...| +|+.. .+.+.||.||.|+.|||..|+++....+| +.|+|+.|...
T Consensus 19 ~~~C-iC~~~------~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 19 LVTC-FCMKP------FAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp CCCS-TTCCC------CTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred ceEe-ECCCc------CCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 3456 88543 23357999999999999999999876555 79999999754
No 100
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.04 E-value=3.7e-06 Score=76.75 Aligned_cols=49 Identities=24% Similarity=0.728 Sum_probs=40.7
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCV 177 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr 177 (845)
...|.+|+.. ++.+.||+|+.|++.||.+|++++...++.+.|+|+.|.
T Consensus 7 ~~~C~~C~~~------g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 7 GANCAVCDSP------GDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CSCBTTTCCC------CCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCcCCCCC------CCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4579999543 233458999999999999999999877788999999986
No 101
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.97 E-value=2.2e-06 Score=71.26 Aligned_cols=50 Identities=12% Similarity=0.073 Sum_probs=42.5
Q ss_pred cccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccceee
Q 003132 24 CGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 24 d~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
.+.|+||++.+.++++...|||+|++.||.+|+.....||+++..+..-.
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~ 52 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEE 52 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGG
T ss_pred eEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhh
Confidence 36899999999997777579999999999999987778999998876433
No 102
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.96 E-value=2.5e-06 Score=74.93 Aligned_cols=47 Identities=21% Similarity=0.601 Sum_probs=36.8
Q ss_pred cccccccccccccccce--eecCCCCcccHhHHHhhhcc--------CCCCCC--ccCc
Q 003132 22 FECGRCGICMDVVIDRG--VLDCCQHWFCFACIDNWSTI--------TNLCPL--CQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~--iL~~CgHtFC~sCI~~Wlk~--------snsCPl--CR~~ 68 (845)
.+...|+||++.+..+. .+.+|+|.||..|+..|... ...||. |+..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 34678999999986543 33579999999999997642 247999 9987
No 103
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=97.94 E-value=3.2e-06 Score=91.52 Aligned_cols=46 Identities=28% Similarity=0.706 Sum_probs=39.2
Q ss_pred ccccccccccccccceeecCCCCc-ccHhHHHhhhccCCCCCCccCccceee
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHW-FCFACIDNWSTITNLCPLCQGEFQLIT 73 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHt-FC~sCI~~Wlk~snsCPlCR~~f~~I~ 73 (845)
++..|+||++.+.++..+ +|+|. ||..|+..| ..||+||..+....
T Consensus 294 ~~~~C~IC~~~~~~~v~l-pCgH~~fC~~C~~~~----~~CP~CR~~i~~~~ 340 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFI-PCGHLVVCQECAPSL----RKCPICRGIIKGTV 340 (345)
T ss_dssp TTCBCTTTSSSBCCEEEE-TTCCEEECTTTGGGC----SBCTTTCCBCCEEE
T ss_pred CCCCCCccCCcCCceEEc-CCCChhHhHHHHhcC----CcCCCCCCCccCeE
Confidence 457899999999885555 69999 999999998 68999999887654
No 104
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.90 E-value=3.9e-06 Score=71.68 Aligned_cols=38 Identities=32% Similarity=0.932 Sum_probs=32.4
Q ss_pred ccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 142 DTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 142 d~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.||.||.|..|||..|+++.........|+|+.|...
T Consensus 29 ~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 29 ERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 46999999999999999999854334589999999765
No 105
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.81 E-value=3.5e-06 Score=91.62 Aligned_cols=50 Identities=26% Similarity=0.636 Sum_probs=38.1
Q ss_pred Cccccccccccccccccee-------ecCCCCcccHhHHHhhhccC-----------CCCCCccCccc
Q 003132 21 NFECGRCGICMDVVIDRGV-------LDCCQHWFCFACIDNWSTIT-----------NLCPLCQGEFQ 70 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~i-------L~~CgHtFC~sCI~~Wlk~s-----------nsCPlCR~~f~ 70 (845)
......|+||++.+.+.+. ...|+|.||..||.+|+... ..||.||..+.
T Consensus 305 ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs 372 (381)
T 3k1l_B 305 DNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLS 372 (381)
T ss_dssp CCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEE
T ss_pred ccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCC
Confidence 3456789999998765221 24799999999999998641 46999998654
No 106
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.79 E-value=3.3e-06 Score=68.13 Aligned_cols=47 Identities=28% Similarity=0.755 Sum_probs=34.6
Q ss_pred CCCCCCCCccccCCCCccccccC-CCCccccccccCCCCCCCCCCcccCCcCC
Q 003132 126 CKIRSGSMVAEESSNLDTSIACD-SCDLWYHAFCVGFDPEGTCEDTWLCPRCV 177 (845)
Q Consensus 126 C~ICgGs~~~~dddned~mLlCD-sCDraYH~~CLgPpl~~vPegdW~CP~Cr 177 (845)
|.+|+... ++.+.||.|| .|+.|||..|+++.......+.|+|+.|+
T Consensus 5 cc~C~~p~-----~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 5 AQNCQRPC-----KDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CTTCCCCC-----CTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred CCCCcCcc-----CCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 56774331 2245799999 89999999999998543334899999995
No 107
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.77 E-value=7.6e-06 Score=71.03 Aligned_cols=49 Identities=31% Similarity=0.701 Sum_probs=37.0
Q ss_pred CCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCC-CCCcccCCcCCCC
Q 003132 125 GCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGT-CEDTWLCPRCVAE 179 (845)
Q Consensus 125 ~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~v-PegdW~CP~Cr~~ 179 (845)
.| +|+... +....||.||.|+.|||..|+++..... ..+.|+|+.|...
T Consensus 14 ~C-~C~~~~-----d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 14 YC-LCRQPY-----NVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CS-TTSCSC-----CSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred EE-EcCCcc-----CCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 45 785432 1245799999999999999999875322 2379999999987
No 108
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.75 E-value=6.5e-06 Score=70.64 Aligned_cols=35 Identities=37% Similarity=1.020 Sum_probs=31.1
Q ss_pred cccccCCCC---ccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 143 TSIACDSCD---LWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 143 ~mLlCDsCD---raYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
.||.||.|+ .|||+.|+++.. .|.+.|+|+.|...
T Consensus 18 ~MI~CD~cdC~~~WfH~~Cvgl~~--~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 18 EMVGCDNQDCPIEWFHYGCVGLTE--APKGKWYCPQCTAA 55 (70)
T ss_dssp SEECCSCTTCSCCCEEHHHHTCSS--CCSSCCCCHHHHHH
T ss_pred CEeEeCCCCCCccCCcccccccCc--CCCCCEECCCCCcc
Confidence 699999986 899999999875 57899999999765
No 109
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.70 E-value=3.3e-06 Score=72.61 Aligned_cols=49 Identities=31% Similarity=0.735 Sum_probs=36.8
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCC-----CCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGT-----CEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~v-----PegdW~CP~Cr~~ 179 (845)
.+| +|+... +.+.||.||.|+.|||..|+++..... ....|+|+.|...
T Consensus 17 ~~C-~C~~~~------~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 17 LYC-ICRQPH------NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCS-TTCCCC------CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CEE-ECCCcc------CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 345 785432 235799999999999999999974321 3579999999876
No 110
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.70 E-value=9.4e-06 Score=68.76 Aligned_cols=39 Identities=26% Similarity=0.658 Sum_probs=30.2
Q ss_pred CccccccCC--CCccccccccCCCCCCC----CCCcccCCcCCCC
Q 003132 141 LDTSIACDS--CDLWYHAFCVGFDPEGT----CEDTWLCPRCVAE 179 (845)
Q Consensus 141 ed~mLlCDs--CDraYH~~CLgPpl~~v----PegdW~CP~Cr~~ 179 (845)
.+.||.||. |..|||..|+|+..... ....|+|+.|+..
T Consensus 21 ~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 21 NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 357999995 99999999999864321 2257999999754
No 111
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.70 E-value=4.2e-06 Score=76.69 Aligned_cols=50 Identities=24% Similarity=0.748 Sum_probs=38.0
Q ss_pred CCCCCCCCCccccCCCCccccccC-CCCccccccccCCCCC------CCCCCcccCCcCCCC
Q 003132 125 GCKIRSGSMVAEESSNLDTSIACD-SCDLWYHAFCVGFDPE------GTCEDTWLCPRCVAE 179 (845)
Q Consensus 125 ~C~ICgGs~~~~dddned~mLlCD-sCDraYH~~CLgPpl~------~vPegdW~CP~Cr~~ 179 (845)
.|.+|+..- ++.+.|+.|| .|+.|||..|+++... ..|.+.|+||.|...
T Consensus 5 ~C~iC~~p~-----~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 5 PCGACRSEV-----NDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp BCTTTCSBC-----CTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred CCCCCCCcc-----CCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 588895431 1224589998 9999999999999842 236689999999877
No 112
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.69 E-value=7.2e-06 Score=66.11 Aligned_cols=37 Identities=22% Similarity=0.697 Sum_probs=31.5
Q ss_pred CccccccCCCCccccccccCCCCCCCCCCcccCCcCCC
Q 003132 141 LDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVA 178 (845)
Q Consensus 141 ed~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~ 178 (845)
.+.||.||.|+.|||..|+++....+| +.|+|+.|+.
T Consensus 15 ~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 15 GRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp TCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred CCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 357999999999999999999865444 7999999964
No 113
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.67 E-value=3.3e-06 Score=71.54 Aligned_cols=48 Identities=27% Similarity=0.861 Sum_probs=37.2
Q ss_pred CCCCCCCCCccccCCCCccccccC-CCCccccccccCCCCC------CCCCCcccCCcCC
Q 003132 125 GCKIRSGSMVAEESSNLDTSIACD-SCDLWYHAFCVGFDPE------GTCEDTWLCPRCV 177 (845)
Q Consensus 125 ~C~ICgGs~~~~dddned~mLlCD-sCDraYH~~CLgPpl~------~vPegdW~CP~Cr 177 (845)
.|.+|+... ++...||.|| .|+.|||..|+++... ..|.+.|+|+.|.
T Consensus 10 ~C~~C~~p~-----~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 10 PCGICTNEV-----NDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp BCTTTCSBC-----CTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCccCCCcc-----CCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 588895431 2335799999 9999999999999842 2366799999985
No 114
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.61 E-value=1.5e-05 Score=69.21 Aligned_cols=49 Identities=24% Similarity=0.626 Sum_probs=37.6
Q ss_pred CCCCCCCCCCccccCCCCccccccC--CCCccccccccCCCCCC-----CCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACD--SCDLWYHAFCVGFDPEG-----TCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCD--sCDraYH~~CLgPpl~~-----vPegdW~CP~Cr~~ 179 (845)
.+| +|+.. ++.+.||.|| .|..|||..|+++.... .....|+|+.|+..
T Consensus 17 ~~C-iC~~~------~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 17 VRC-VCGNS------LETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCC-SSCCC------CCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred EEe-ECCCc------CCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 346 79543 2335799999 99999999999998643 23479999999876
No 115
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=97.59 E-value=3.7e-05 Score=63.80 Aligned_cols=48 Identities=21% Similarity=0.549 Sum_probs=37.1
Q ss_pred cccccccccccccccceeecCCC--C---cccHhHHHhhhcc--CCCCCCccCccc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQ--H---WFCFACIDNWSTI--TNLCPLCQGEFQ 70 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~Cg--H---tFC~sCI~~Wlk~--snsCPlCR~~f~ 70 (845)
.+...|.||++...+.. +.+|. | .||..||.+|+.. ..+||+|+..|.
T Consensus 4 ~~~~~CrIC~~~~~~~l-~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEELGNER-FRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCC-CCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCCCCce-ecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 34578999999765533 45554 5 8999999999854 678999998875
No 116
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.57 E-value=1.2e-05 Score=77.63 Aligned_cols=47 Identities=21% Similarity=0.520 Sum_probs=39.2
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC-------CCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG-------TCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~-------vPegdW~CP~Cr~~ 179 (845)
..|.+|+.. +.+++||.|.+.||..|+.|++.. .|.++|+|+.|...
T Consensus 64 d~C~vC~~G---------G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 64 EQCRWCAEG---------GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp CSCSSSCCC---------SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CeecccCCC---------CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 469999533 348999999999999999998752 48899999999876
No 117
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.54 E-value=5.4e-06 Score=80.54 Aligned_cols=50 Identities=32% Similarity=0.727 Sum_probs=37.8
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC-CCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG-TCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~-vPegdW~CP~Cr~~ 179 (845)
..| +|+... +..+.|+.||.|+.|||..|+++.... ...+.|+|+.|+..
T Consensus 9 ~~C-~C~~~~-----~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 9 LYC-ICKTPE-----DESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp EET-TTTEEC-----CTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred cEe-eCCCCC-----CCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 457 896431 223579999999999999999987432 23579999999876
No 118
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.51 E-value=5.4e-05 Score=69.46 Aligned_cols=50 Identities=26% Similarity=0.505 Sum_probs=43.0
Q ss_pred cccccccccccceeecCCCCcccHhHHHhhhc-cCCCCCCccCccceeeec
Q 003132 26 RCGICMDVVIDRGVLDCCQHWFCFACIDNWST-ITNLCPLCQGEFQLITCV 75 (845)
Q Consensus 26 ~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk-~snsCPlCR~~f~~I~~i 75 (845)
-|.+|--.+...+.+.+|.|+||.+|+..|.+ ..+.||.|+..+..+...
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~~ 53 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQC 53 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEEE
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEEe
Confidence 48889888887788888999999999999985 578899999999877653
No 119
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.50 E-value=1.8e-05 Score=68.19 Aligned_cols=39 Identities=36% Similarity=0.882 Sum_probs=32.9
Q ss_pred CccccccCCCCccccccccCCCCCCCC-CCcccCCcCCCC
Q 003132 141 LDTSIACDSCDLWYHAFCVGFDPEGTC-EDTWLCPRCVAE 179 (845)
Q Consensus 141 ed~mLlCDsCDraYH~~CLgPpl~~vP-egdW~CP~Cr~~ 179 (845)
.+.||.||.|+.|||..|+++.....+ .+.|+|+.|...
T Consensus 22 ~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 22 TRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp TSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 357999999999999999999865443 368999999866
No 120
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.42 E-value=2.2e-05 Score=72.16 Aligned_cols=54 Identities=20% Similarity=0.442 Sum_probs=39.4
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCC---CCCCCCCcccCCcCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFD---PEGTCEDTWLCPRCV 177 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPp---l~~vPegdW~CP~Cr 177 (845)
..|.+|.+.......+..+.||.|+.|++.||.+|+++. ...++.+.|+|+.|.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 457888654322222345679999999999999999864 123578899999996
No 121
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.39 E-value=3.5e-05 Score=71.16 Aligned_cols=54 Identities=20% Similarity=0.482 Sum_probs=39.5
Q ss_pred CCCCCCCCCCcc-ccCCCCccccccCCCCccccccccCCCCC---CCCCCcccCCcCC
Q 003132 124 DGCKIRSGSMVA-EESSNLDTSIACDSCDLWYHAFCVGFDPE---GTCEDTWLCPRCV 177 (845)
Q Consensus 124 ~~C~ICgGs~~~-~dddned~mLlCDsCDraYH~~CLgPpl~---~vPegdW~CP~Cr 177 (845)
+.|.+|.+.... ...+..+.||+|+.|++.||.+|+++... .++.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 458888554311 11234467999999999999999998732 3678899999985
No 122
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.31 E-value=8.2e-05 Score=84.53 Aligned_cols=40 Identities=38% Similarity=0.918 Sum_probs=32.9
Q ss_pred CCccccccCCCCccccccccCCCCCCC-CCCcccCCcCCCC
Q 003132 140 NLDTSIACDSCDLWYHAFCVGFDPEGT-CEDTWLCPRCVAE 179 (845)
Q Consensus 140 ned~mLlCDsCDraYH~~CLgPpl~~v-PegdW~CP~Cr~~ 179 (845)
+...|+.||.|+.|||..|+|+..... ..+.|+||.|...
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred cCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 345799999999999999999985432 3479999999865
No 123
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.22 E-value=6.2e-05 Score=75.28 Aligned_cols=55 Identities=20% Similarity=0.541 Sum_probs=39.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCC------CCC-CCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPE------GTC-EDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~------~vP-egdW~CP~Cr~~ 179 (845)
+..|.+|+..-. . ++....||.||.|+.|||..|+++... ..| ...|+||.|+..
T Consensus 2 G~~CpiC~k~Y~-~-~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 2 GNFCPLCDKCYD-D-DDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CCBCTTTCCBCT-T-CCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCcCCCCcCccC-C-cccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 456999964421 1 111245999999999999999998731 112 248999999988
No 124
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=96.95 E-value=0.00043 Score=71.47 Aligned_cols=47 Identities=19% Similarity=0.574 Sum_probs=39.7
Q ss_pred cccccccccccccceeecCCCCcccHhHHHhhhccC--CCCCCccCccc
Q 003132 24 CGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTIT--NLCPLCQGEFQ 70 (845)
Q Consensus 24 d~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~s--nsCPlCR~~f~ 70 (845)
-..|.||.+.+.....+..|+|.||..|+..|.+.. ..||.|+....
T Consensus 180 i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~ 228 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWP 228 (238)
T ss_dssp CCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCC
T ss_pred CCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCC
Confidence 568999999987766777799999999999998664 48999987654
No 125
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.86 E-value=8.5e-05 Score=70.81 Aligned_cols=47 Identities=21% Similarity=0.515 Sum_probs=37.9
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCC-----CC--CCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPE-----GT--CEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~-----~v--PegdW~CP~Cr~~ 179 (845)
..|.+|+.. +.+++||.|.+.||..|+.+++. .+ |.+.|+|+.|...
T Consensus 58 ~~C~vC~dG---------G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 58 EQCRWCAEG---------GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp SSCTTTCCC---------SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CcCeecCCC---------CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 469999532 34899999999999999998742 22 7899999999876
No 126
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=96.63 E-value=0.00026 Score=79.91 Aligned_cols=39 Identities=33% Similarity=0.830 Sum_probs=32.3
Q ss_pred CccccccCCCCccccccccCCCCCCCC-CCcccCCcCCCC
Q 003132 141 LDTSIACDSCDLWYHAFCVGFDPEGTC-EDTWLCPRCVAE 179 (845)
Q Consensus 141 ed~mLlCDsCDraYH~~CLgPpl~~vP-egdW~CP~Cr~~ 179 (845)
.+.||.||.|+.|||..|+++...... .+.|+|+.|...
T Consensus 49 ~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 49 NRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp TSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 467999999999999999999854322 368999999866
No 127
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=96.35 E-value=0.00029 Score=78.87 Aligned_cols=39 Identities=36% Similarity=0.868 Sum_probs=32.2
Q ss_pred CccccccCCCCccccccccCCCCCCCC-CCcccCCcCCCC
Q 003132 141 LDTSIACDSCDLWYHAFCVGFDPEGTC-EDTWLCPRCVAE 179 (845)
Q Consensus 141 ed~mLlCDsCDraYH~~CLgPpl~~vP-egdW~CP~Cr~~ 179 (845)
.+.|+.||.|+.|||..|+++.....+ .+.|+|+.|...
T Consensus 17 ~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 17 TRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp TSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred CCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 467999999999999999998854322 378999999876
No 128
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=96.19 E-value=0.0019 Score=59.05 Aligned_cols=39 Identities=31% Similarity=0.738 Sum_probs=30.1
Q ss_pred CccccccCCCCccccccccCCCCCCCC----CCcccCCcCCCC
Q 003132 141 LDTSIACDSCDLWYHAFCVGFDPEGTC----EDTWLCPRCVAE 179 (845)
Q Consensus 141 ed~mLlCDsCDraYH~~CLgPpl~~vP----egdW~CP~Cr~~ 179 (845)
...|+.|+.|+.|||..|+++...... .+.|+|+.|...
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 346889999999999999998865333 345999999876
No 129
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=95.79 E-value=0.0071 Score=55.94 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=31.8
Q ss_pred CCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccC
Q 003132 126 CKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLC 173 (845)
Q Consensus 126 C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~C 173 (845)
|.+|+... .+.|..|+.+||..|+...+...+.+.|+|
T Consensus 61 C~~C~k~~----------~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 61 CDECSSAA----------VSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CTTTCSBC----------CEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCcCCCCC----------CcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 77885431 378999999999999999988788899987
No 130
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=95.47 E-value=0.0052 Score=55.70 Aligned_cols=36 Identities=22% Similarity=0.686 Sum_probs=29.5
Q ss_pred ccccCCCCccccccccCCCC------CCCC-CCcccCCcCCCC
Q 003132 144 SIACDSCDLWYHAFCVGFDP------EGTC-EDTWLCPRCVAE 179 (845)
Q Consensus 144 mLlCDsCDraYH~~CLgPpl------~~vP-egdW~CP~Cr~~ 179 (845)
|+.||.|+.|||..|.+... ...| ...|.||.|...
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 89999999999999999872 2223 458999999876
No 131
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.35 E-value=0.0063 Score=54.53 Aligned_cols=50 Identities=18% Similarity=0.422 Sum_probs=38.7
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCC------------CCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFD------------PEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPp------------l~~vPegdW~CP~Cr~~ 179 (845)
+..|.||..- ..+.++-|..|.+.||..|+..+ +...+..-|.|+.|.+.
T Consensus 15 D~~C~VC~~~-------t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 15 DEMCDVCEVW-------TAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp SCCCTTTCCC-------CSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcccCccccc-------cccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 4578999432 12358899999999999999875 34457789999999776
No 132
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=92.47 E-value=0.052 Score=47.79 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=25.7
Q ss_pred cccccccccccc-cccee-ecCCCCcccHhHHHh-hh
Q 003132 23 ECGRCGICMDVV-IDRGV-LDCCQHWFCFACIDN-WS 56 (845)
Q Consensus 23 Ed~~CpICLE~f-~d~~i-L~~CgHtFC~sCI~~-Wl 56 (845)
++..|+||++.+ .+++. ...|+|.||..|+.. |.
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~h~ 38 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHP 38 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHHSC
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHHhc
Confidence 457899999864 44332 377999999999997 54
No 133
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=91.50 E-value=0.18 Score=42.68 Aligned_cols=46 Identities=28% Similarity=0.474 Sum_probs=36.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhc----cCCCCCCccCc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~~ 68 (845)
..+..|.||.+. .+......|...||..|+...+. ....||.|...
T Consensus 10 ~~~~~C~vC~~~-~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 10 APGARCGVCGDG-TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CTTCCCTTTSCC-TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCCcCCCCCC-CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 345679999875 45577888999999999987664 36789999754
No 134
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=91.14 E-value=0.48 Score=42.44 Aligned_cols=54 Identities=24% Similarity=0.506 Sum_probs=37.1
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCCCCc-cccccccCCCCCCCCCCcccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDSCDL-WYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDsCDr-aYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+...|..-.|....++.+ .-.|++|..|.. +.|..|..... ....|.|..|..-
T Consensus 25 dA~~Clc~~GR~~~~~~~-~W~L~lC~~Cgs~gtH~~Cs~l~~---~~~~weC~~C~~v 79 (85)
T 1weq_A 25 DAPICLYEQGRDSFEDEG-RWRLILCATCGSHGTHRDCSSLRP---NSKKWECNECLPA 79 (85)
T ss_dssp CCSCCCSTTCSSCCBSSS-TTBCEECSSSCCCEECSGGGTCCT---TCSCCCCTTTSCC
T ss_pred CccccCCCCCcccccCCC-CEEEEeCcccCCchhHHHHhCCcC---CCCCEECCcCccc
Confidence 445565545554433322 337899999986 59999999752 3469999999864
No 135
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=87.63 E-value=0.21 Score=45.66 Aligned_cols=46 Identities=24% Similarity=0.772 Sum_probs=37.4
Q ss_pred cccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 24 CGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 24 d~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
..-|-.|+-. +...+....|.+|..|+...+.....||+|...+..
T Consensus 28 ~~nCKsCWf~--~k~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPt 73 (99)
T 2ko5_A 28 PQFCKSCWFE--NKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPT 73 (99)
T ss_dssp CCCCCSSCSC--CSSEEECSSCEEEHHHHHHTCSSSSEETTTTEECCC
T ss_pred cccChhhccc--cCCeeeecchhhHHHHHHHHHhhccCCcccCCcCCc
Confidence 4568888865 445666678999999999999999999999877653
No 136
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=84.77 E-value=0.64 Score=36.01 Aligned_cols=48 Identities=21% Similarity=0.369 Sum_probs=32.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.||..... ..+.......|+..||..|+...+.. ...||.|+..
T Consensus 5 ~~~C~IC~~~~~-----~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 5 GVECAVCLAELE-----DGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp SCCCTTTCCCCC-----TTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCcCccCCcccc-----CCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 356899954421 11123334469999999999877643 4579999976
No 137
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=83.85 E-value=0.36 Score=48.30 Aligned_cols=46 Identities=17% Similarity=0.310 Sum_probs=35.7
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhc----cCCCCCCccCcc
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQGEF 69 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~~f 69 (845)
.+..|.+|... .+......|...||..|+.+.+. ....||.|+..-
T Consensus 6 ~~~~C~~C~~~-g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 6 NEDWCAVCQNG-GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SCSSBTTTCCC-EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC-CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 45789999976 45577888999999999987553 467899998643
No 138
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=83.25 E-value=0.43 Score=46.73 Aligned_cols=45 Identities=18% Similarity=0.371 Sum_probs=35.6
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhhc----cCCCCCCccCc
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQGE 68 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~~ 68 (845)
.++.|.||... .+......|...||..|+.+.+. ....||.|+..
T Consensus 3 ~~~~C~~C~~~-g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 3 NEDWCAVCQNG-GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp SCSSCTTTCCC-SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCccccCCCC-CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 45789999976 45577888999999999977543 36789999864
No 139
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=82.98 E-value=0.79 Score=45.90 Aligned_cols=38 Identities=21% Similarity=0.602 Sum_probs=28.6
Q ss_pred ccccccCCCCccccccccCCCCCC-CC---CCcccCCcCCCC
Q 003132 142 DTSIACDSCDLWYHAFCVGFDPEG-TC---EDTWLCPRCVAE 179 (845)
Q Consensus 142 d~mLlCDsCDraYH~~CLgPpl~~-vP---egdW~CP~Cr~~ 179 (845)
..|+.|+.|.+|||..|+...... +| -....|-.|...
T Consensus 18 ~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 18 EVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp SCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred ceeEeeccccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 469999999999999999865321 23 235569999775
No 140
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=82.84 E-value=1 Score=37.17 Aligned_cols=46 Identities=20% Similarity=0.395 Sum_probs=35.5
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhh----ccCCCCCCccC
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS----TITNLCPLCQG 67 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~ 67 (845)
...+..|.||... .+......|...||..|+..-+ .....||.|..
T Consensus 8 ~~~~~~C~vC~~~-g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 8 TDHQDYCEVCQQG-GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SCCCSSCTTTSCC-SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCCccCCCC-CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 3446789999985 4556778899999999998743 34678999964
No 141
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=80.20 E-value=0.68 Score=39.26 Aligned_cols=51 Identities=18% Similarity=0.450 Sum_probs=36.6
Q ss_pred cCccccccccccccccc--ceeecCCCCcccHhHHHhhhc----cCCCCCCccCccc
Q 003132 20 LNFECGRCGICMDVVID--RGVLDCCQHWFCFACIDNWST----ITNLCPLCQGEFQ 70 (845)
Q Consensus 20 sssEd~~CpICLE~f~d--~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~~f~ 70 (845)
...+...|+||...... ......|...||..|+..-.. ....||.|...+.
T Consensus 14 ~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 14 WGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp SSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred cCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34456689999886422 356778999999999986442 3678999976543
No 142
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=79.51 E-value=0.73 Score=38.09 Aligned_cols=46 Identities=22% Similarity=0.416 Sum_probs=34.7
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhh----ccCCCCCCccCc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS----TITNLCPLCQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~~ 68 (845)
..+..|.||.+. .+......|...||..|+.+-+ .....||.|...
T Consensus 7 ~~~~~C~vC~~~-g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG-GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC-SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCCcCCCCCCC-CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 346789999874 4556777899999999998643 236789999754
No 143
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=79.25 E-value=1.2 Score=39.99 Aligned_cols=50 Identities=20% Similarity=0.315 Sum_probs=38.1
Q ss_pred ccccCcccccccccccccccceeecCCCCcccHhHHHhhhc----cCCCCCCccC
Q 003132 17 NDLLNFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQG 67 (845)
Q Consensus 17 ~DssssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~ 67 (845)
.+.....+..|.||... .+....+.|...||..|+.+-+. ....||.|..
T Consensus 18 ~~~~d~n~~~C~vC~~~-g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 18 FGTLDDSATICRVCQKP-GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp CCSSSSSSSCCSSSCSS-SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred ccccCCCCCcCcCcCCC-CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccC
Confidence 34445567899999986 45577888999999999977543 3678999974
No 144
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.89 E-value=0.43 Score=38.67 Aligned_cols=46 Identities=22% Similarity=0.436 Sum_probs=34.7
Q ss_pred CcccccccccccccccceeecCCCCcccHhHHHhhhc----cCCCCCCccC
Q 003132 21 NFECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQG 67 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~ 67 (845)
+..+..|.||... .+......|...||..|+.+-+. ....||.|..
T Consensus 6 ~~~~~~C~vC~~~-g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS-GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS-SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC-CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 4456789999986 45577788999999999986432 3567988853
No 145
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=78.55 E-value=1.5 Score=42.36 Aligned_cols=45 Identities=22% Similarity=0.373 Sum_probs=35.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhh-----------ccCCCCCCccC
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS-----------TITNLCPLCQG 67 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl-----------k~snsCPlCR~ 67 (845)
..++.|.||.+. .+......|..+||..||.+-+ .....||.|+.
T Consensus 61 g~~d~C~vC~~G-G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 61 GMDEQCRWCAEG-GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCBCSCSSSCCC-SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCeecccCCC-CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 346789999997 4557788899999999999533 23678999974
No 146
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=77.77 E-value=2.3 Score=38.63 Aligned_cols=51 Identities=24% Similarity=0.414 Sum_probs=38.2
Q ss_pred Cccccccccccccccc------ceeecCCCCcccHhHHHhh-hccCCCCCCccCccce
Q 003132 21 NFECGRCGICMDVVID------RGVLDCCQHWFCFACIDNW-STITNLCPLCQGEFQL 71 (845)
Q Consensus 21 ssEd~~CpICLE~f~d------~~iL~~CgHtFC~sCI~~W-lk~snsCPlCR~~f~~ 71 (845)
......|.||-+.+.- .+-...|.--.|+.|...- ...+..||+|+..|..
T Consensus 13 ~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred ccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccc
Confidence 3355799999998742 1345558888999999864 4568899999988764
No 147
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=77.44 E-value=1.1 Score=40.36 Aligned_cols=53 Identities=26% Similarity=0.404 Sum_probs=33.9
Q ss_pred CCCccccCcccccccccccccc--cceeecCCCCcccHhHHHhhhc---cCCCCCCccC
Q 003132 14 NTENDLLNFECGRCGICMDVVI--DRGVLDCCQHWFCFACIDNWST---ITNLCPLCQG 67 (845)
Q Consensus 14 ~~~~DssssEd~~CpICLE~f~--d~~iL~~CgHtFC~sCI~~Wlk---~snsCPlCR~ 67 (845)
+..++....+...| ||..... ..+....|...||..|+..-.. ....||.|+.
T Consensus 18 ~~edg~~~~d~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 18 GSEDGSYGTDVTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp -CTTCCCCCCBCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCccCCCCCCCEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 33344444444567 8876543 2356778999999999876322 2468999974
No 148
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=76.68 E-value=0.63 Score=38.32 Aligned_cols=48 Identities=25% Similarity=0.592 Sum_probs=34.7
Q ss_pred Cccccccccccccccc---ceeecCCCCcccHhHHHhhhc-----cCCCCCCccCc
Q 003132 21 NFECGRCGICMDVVID---RGVLDCCQHWFCFACIDNWST-----ITNLCPLCQGE 68 (845)
Q Consensus 21 ssEd~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~Wlk-----~snsCPlCR~~ 68 (845)
+.++..|+||...+.+ .+....|...||..|+.--.. ....||.|+..
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 4566789999987632 255678999999999875321 35679999754
No 149
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=76.62 E-value=0.4 Score=42.48 Aligned_cols=53 Identities=13% Similarity=0.285 Sum_probs=38.4
Q ss_pred ccccCccccccccccccc----ccceeecCCCCcccHhHHHhhh--------ccCCCCCCccCcc
Q 003132 17 NDLLNFECGRCGICMDVV----IDRGVLDCCQHWFCFACIDNWS--------TITNLCPLCQGEF 69 (845)
Q Consensus 17 ~DssssEd~~CpICLE~f----~d~~iL~~CgHtFC~sCI~~Wl--------k~snsCPlCR~~f 69 (845)
.+.....+..|.||...- ........|...||..|+.+-+ .....|+.|....
T Consensus 9 dd~~~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 9 DDFAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCCHHHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred ccccCCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 334444577999999863 2346788899999999998643 2467899997544
No 150
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=75.83 E-value=2 Score=35.56 Aligned_cols=48 Identities=21% Similarity=0.346 Sum_probs=30.7
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... ... .+.--.|.+.||..|+...+.. ...||.|+..+
T Consensus 15 ~~~C~IC~~~~~-----~~~-~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYA-----LGE-SVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCC-----TTS-CEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCC
T ss_pred CCCCeeCCcccc-----CCC-CEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCcc
Confidence 456999954321 111 1212258999999999876532 35799999884
No 151
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=75.02 E-value=0.78 Score=35.41 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... +.+..+..-.|++.||..|+...+.. ...||.|+..+
T Consensus 5 ~~~C~IC~~~~~-----~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 53 (55)
T 2ecm_A 5 SSGCPICLEDIH-----TSRVVAHVLPCGHLLHRTCYEEMLKE----GYRCPLCSGPS 53 (55)
T ss_dssp CCSCTTTCCCCC-----TTTSCEEECTTSCEEETTHHHHHHHH----TCCCTTSCCSS
T ss_pred CCcCcccChhhc-----CCCcCeEecCCCCcccHHHHHHHHHc----CCcCCCCCCcC
Confidence 456899954321 11123444569999999999866432 26799999873
No 152
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=73.63 E-value=0.77 Score=45.33 Aligned_cols=47 Identities=26% Similarity=0.537 Sum_probs=36.6
Q ss_pred CCCCCCCCCCccccCCCCccccccC--CCCccccccccCCCCCC------CCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACD--SCDLWYHAFCVGFDPEG------TCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCD--sCDraYH~~CLgPpl~~------vPegdW~CP~Cr~~ 179 (845)
.+|.+|+.+ +.+++|| .|.+.|...|+...+.. ...+.|.|-.|...
T Consensus 80 ~yC~wC~~G---------g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 80 SYCTICCGG---------REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp SSCTTTSCC---------SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred ceeeEecCC---------CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 369999533 3589999 89999999998765322 34679999999987
No 153
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=73.42 E-value=0.88 Score=38.07 Aligned_cols=45 Identities=24% Similarity=0.384 Sum_probs=35.0
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhh----ccCCCCCCccC
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS----TITNLCPLCQG 67 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~ 67 (845)
..+..|.||.+. .+....+.|...||..|+.+-+ .....||.|..
T Consensus 6 ~~~~~C~vC~~~-g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 6 KNEDECAVCRDG-GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp SCCCSBSSSSCC-SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCccCCCC-CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 456799999975 4557788899999999998543 24678999964
No 154
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=73.34 E-value=2.2 Score=36.51 Aligned_cols=52 Identities=29% Similarity=0.547 Sum_probs=33.5
Q ss_pred CccccCccccccccccccc-ccceeecC--CC-CcccHhHHHhhh--ccCCCCCCccCc
Q 003132 16 ENDLLNFECGRCGICMDVV-IDRGVLDC--CQ-HWFCFACIDNWS--TITNLCPLCQGE 68 (845)
Q Consensus 16 ~~DssssEd~~CpICLE~f-~d~~iL~~--Cg-HtFC~sCI~~Wl--k~snsCPlCR~~ 68 (845)
.......+...| ||.... ...+.... |. ..||..|+.--. .....||.|+..
T Consensus 8 ~~~~d~~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 8 DMPVDPNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp CCCCCTTSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSC
T ss_pred ccccCCCCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcc
Confidence 334444566788 898853 23244555 66 689999987322 246789999754
No 155
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.06 E-value=1.1 Score=38.73 Aligned_cols=46 Identities=22% Similarity=0.504 Sum_probs=33.1
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
..|.||..... .-+.|..|...||..|+.-.+... ..-.||.|+..
T Consensus 16 ~~C~IC~~~i~--------~g~~C~~C~h~fH~~Ci~kWl~~~--~~~~CP~Cr~~ 61 (74)
T 2ct0_A 16 KICNICHSLLI--------QGQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCNDY 61 (74)
T ss_dssp CBCSSSCCBCS--------SSEECSSSCCEECHHHHHHHSTTC--SSCCCTTTCSC
T ss_pred CcCcchhhHcc--------cCCccCCCCchhhHHHHHHHHHhc--CCCCCCCCcCc
Confidence 46999954432 125688999999999999776432 23569999987
No 156
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.86 E-value=1.4 Score=37.50 Aligned_cols=28 Identities=21% Similarity=0.615 Sum_probs=23.0
Q ss_pred CCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 148 DSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 148 DsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
-.|.+.||..|+...+.. .-.||.|+..
T Consensus 46 ~~C~H~FH~~Ci~~Wl~~----~~~CP~CR~~ 73 (81)
T 2ecl_A 46 GECNHSFHNCCMSLWVKQ----NNRCPLCQQD 73 (81)
T ss_dssp ETTSCEEEHHHHHHHTTT----CCBCTTTCCB
T ss_pred CCCCCccChHHHHHHHHh----CCCCCCcCCC
Confidence 379999999999988653 2379999987
No 157
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=72.68 E-value=2.6 Score=40.22 Aligned_cols=44 Identities=23% Similarity=0.421 Sum_probs=33.4
Q ss_pred ccccccccccccccceeecCCCCcccHhHHHhhh-----------ccCCCCCCccC
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS-----------TITNLCPLCQG 67 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl-----------k~snsCPlCR~ 67 (845)
.+..|.||.+. .+......|...||..||.+-+ .....|+.|+.
T Consensus 56 ~~~~C~vC~dG-G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEG-GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCC-SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCC-CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45679999987 3445677899999999999631 23578999964
No 158
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=72.19 E-value=0.82 Score=39.66 Aligned_cols=49 Identities=22% Similarity=0.423 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
+...|.||..... . . + .+..-.|++.||..|+...+.. ...||.|+..+
T Consensus 39 ~~~~C~IC~~~~~--~--~-~-~~~~l~C~H~Fh~~Ci~~wl~~----~~~CP~Cr~~~ 87 (91)
T 2l0b_A 39 QEMCCPICCSEYV--K--G-D-VATELPCHHYFHKPCVSIWLQK----SGTCPVCRCMF 87 (91)
T ss_dssp SCSEETTTTEECC--T--T-C-EEEEETTTEEEEHHHHHHHHTT----TCBCTTTCCBS
T ss_pred CCCCCcccChhhc--C--C-C-cEEecCCCChHHHHHHHHHHHc----CCcCcCcCccC
Confidence 3456999953321 1 1 1 1222349999999999877542 34799999874
No 159
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=72.06 E-value=1.1 Score=36.43 Aligned_cols=48 Identities=19% Similarity=0.377 Sum_probs=30.7
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||...... . ..+..-.|++.||..|+...+.. ...||.|+..+
T Consensus 14 ~~~C~IC~~~~~~----~--~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 61 (69)
T 2kiz_A 14 EEKCTICLSILEE----G--EDVRRLPCMHLFHQVCVDQWLIT----NKKCPICRVDI 61 (69)
T ss_dssp CCSBTTTTBCCCS----S--SCEEECTTSCEEEHHHHHHHHHH----CSBCTTTCSBS
T ss_pred CCCCeeCCccccC----C--CcEEEeCCCCHHHHHHHHHHHHc----CCCCcCcCccc
Confidence 4569999543211 1 11233469999999999876432 23599999884
No 160
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=71.93 E-value=1 Score=36.86 Aligned_cols=46 Identities=22% Similarity=0.486 Sum_probs=35.2
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhh----ccCCCCCCccCc
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS----TITNLCPLCQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~~ 68 (845)
..+..|.||... .+......|...||..|+.+-+ .....||.|...
T Consensus 3 ~~~~~C~vC~~~-g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS-GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC-SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCC-CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 456789999985 4557788899999999998643 236679999643
No 161
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=71.59 E-value=1.4 Score=43.80 Aligned_cols=44 Identities=20% Similarity=0.346 Sum_probs=34.2
Q ss_pred cccccccccccccceeecCCCCcccHhHHHhhh----ccCCCCCCccCc
Q 003132 24 CGRCGICMDVVIDRGVLDCCQHWFCFACIDNWS----TITNLCPLCQGE 68 (845)
Q Consensus 24 d~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~~ 68 (845)
+..|.+|... .+....+.|...||..|+.+-+ .....||.|+..
T Consensus 2 ~~~C~~C~~~-g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP-GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC-SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC-CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 4689999976 3556778899999999997643 346789999754
No 162
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.01 E-value=0.59 Score=38.76 Aligned_cols=48 Identities=21% Similarity=0.354 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... . ...+..-.|.+.||..|+...+.. ...||.|+..+
T Consensus 23 ~~~C~IC~~~~~-----~-~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFE-----S-RQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECC-----B-TCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCeECCcccC-----C-CCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcC
Confidence 456899953321 1 112333359999999999876532 35799999873
No 163
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=69.70 E-value=0.78 Score=40.83 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=24.6
Q ss_pred cCCCCccccccccCCCCCCC-CCCcccCCcCCCCC
Q 003132 147 CDSCDLWYHAFCVGFDPEGT-CEDTWLCPRCVAEV 180 (845)
Q Consensus 147 CDsCDraYH~~CLgPpl~~v-PegdW~CP~Cr~~~ 180 (845)
.-.|.+.||..|+...+... ....-.||.|+..+
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~ 92 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIY 92 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCcc
Confidence 45799999999998765211 12456899999884
No 164
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=68.88 E-value=0.69 Score=51.19 Aligned_cols=47 Identities=23% Similarity=0.526 Sum_probs=36.1
Q ss_pred CCCCCCCCCCccccCCCCccccccC--CCCccccccccCCCCC------CCCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACD--SCDLWYHAFCVGFDPE------GTCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCD--sCDraYH~~CLgPpl~------~vPegdW~CP~Cr~~ 179 (845)
..|.+|+.. ..+++|| .|.+.|+..|+...+- ....+.|.|-.|...
T Consensus 94 ~yCr~C~~G---------g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 94 SYCSICCSG---------ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp CSCTTTCCC---------SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred ccceEcCCC---------CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 368999533 2489999 9999999999876641 123579999999987
No 165
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=67.74 E-value=2.7 Score=37.25 Aligned_cols=49 Identities=27% Similarity=0.240 Sum_probs=36.1
Q ss_pred cCccccccccccccc----ccceeecCCCCcccHhHHHhhh--ccCCCCCCccCc
Q 003132 20 LNFECGRCGICMDVV----IDRGVLDCCQHWFCFACIDNWS--TITNLCPLCQGE 68 (845)
Q Consensus 20 sssEd~~CpICLE~f----~d~~iL~~CgHtFC~sCI~~Wl--k~snsCPlCR~~ 68 (845)
....+..|.||...- ......+.|.-.||..|+..-. .....||.|...
T Consensus 21 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 21 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 345668999999753 1346677899999999998643 346789999654
No 166
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.63 E-value=3.6 Score=37.00 Aligned_cols=49 Identities=31% Similarity=0.607 Sum_probs=32.1
Q ss_pred ccCcccccccccccccc-cceeecC--CC-CcccHhHHHhhh--ccCCCCCCccCc
Q 003132 19 LLNFECGRCGICMDVVI-DRGVLDC--CQ-HWFCFACIDNWS--TITNLCPLCQGE 68 (845)
Q Consensus 19 ssssEd~~CpICLE~f~-d~~iL~~--Cg-HtFC~sCI~~Wl--k~snsCPlCR~~ 68 (845)
....+...| ||..... ..+.... |. ..||..|+.--. .....||.|+..
T Consensus 31 ~d~~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCSCCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCC
T ss_pred cCCCCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCc
Confidence 344456678 9998642 3344555 66 689999987322 236789999754
No 167
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=67.45 E-value=1.3 Score=41.34 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=0.0
Q ss_pred cccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 145 IACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 145 LlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
+.--.|...||..|+...+.. .-.||.|+..
T Consensus 79 v~~~~C~H~FH~~CI~~Wl~~----~~~CP~Cr~~ 109 (117)
T 4a0k_B 79 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 109 (117)
T ss_dssp -----------------------------------
T ss_pred cccCCcCceEcHHHHHHHHHc----CCcCCCCCCe
Confidence 333479999999999998753 4579999987
No 168
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=67.41 E-value=3.8 Score=32.19 Aligned_cols=42 Identities=26% Similarity=0.448 Sum_probs=31.0
Q ss_pred ccccccccc--ccceeecCCCCcccHhHHHhhhc----cCCCCCCccC
Q 003132 26 RCGICMDVV--IDRGVLDCCQHWFCFACIDNWST----ITNLCPLCQG 67 (845)
Q Consensus 26 ~CpICLE~f--~d~~iL~~CgHtFC~sCI~~Wlk----~snsCPlCR~ 67 (845)
.|.||...- .+....+.|...||..|+.+-+. ....||.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 588998653 23467788999999999975432 3667999964
No 169
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=66.73 E-value=2.8 Score=36.11 Aligned_cols=49 Identities=16% Similarity=0.333 Sum_probs=32.8
Q ss_pred ccCccccccccccccccc--ceeec--CCCCcccHhHHHhhhc---------cCCCCCCccCc
Q 003132 19 LLNFECGRCGICMDVVID--RGVLD--CCQHWFCFACIDNWST---------ITNLCPLCQGE 68 (845)
Q Consensus 19 ssssEd~~CpICLE~f~d--~~iL~--~CgHtFC~sCI~~Wlk---------~snsCPlCR~~ 68 (845)
....+...| ||...... .+... .|...||..|+.--.. ....||.|+..
T Consensus 11 ~~~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 11 FQPEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SSCCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred cCCCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 334456778 89987322 24455 7999999999864321 35679999743
No 170
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=65.17 E-value=1.7 Score=39.56 Aligned_cols=30 Identities=23% Similarity=0.392 Sum_probs=24.1
Q ss_pred ccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 146 ACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 146 lCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
.--.|.+.||..|+...+.. .-.||.|+..
T Consensus 69 ~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 69 AWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp EEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred eecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 33479999999999988653 4579999987
No 171
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=63.76 E-value=2.6 Score=36.04 Aligned_cols=51 Identities=25% Similarity=0.207 Sum_probs=37.0
Q ss_pred ccccCccccccccccccc----ccceeecCCCCcccHhHHHhhh--ccCCCCCCccC
Q 003132 17 NDLLNFECGRCGICMDVV----IDRGVLDCCQHWFCFACIDNWS--TITNLCPLCQG 67 (845)
Q Consensus 17 ~DssssEd~~CpICLE~f----~d~~iL~~CgHtFC~sCI~~Wl--k~snsCPlCR~ 67 (845)
.......+..|.||...- ......+.|.-.||..|+..-. .....||.|..
T Consensus 9 ~~~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 9 MQSLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp -CCCCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred cccCCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 344556678999998763 2346778899999999998643 34678999964
No 172
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.52 E-value=2.8 Score=34.07 Aligned_cols=48 Identities=19% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||.... .+.+++ .|++.||..|+...+.. ......||.|+..+
T Consensus 20 ~~~C~IC~~~~-------~~~~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 20 EVICPICLDIL-------QKPVTI--DCGHNFCLKCITQIGET-SCGFFKCPLCKTSV 67 (73)
T ss_dssp CCBCTTTCSBC-------SSEEEC--TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCCC
T ss_pred CCEeccCCccc-------CCeEEc--CCCChhhHHHHHHHHHc-CCCCCCCCCCCCcC
Confidence 34699995332 122333 79999999999876531 23466899999883
No 173
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=62.84 E-value=1.8 Score=35.74 Aligned_cols=48 Identities=21% Similarity=0.340 Sum_probs=35.3
Q ss_pred Cccccccccccccc----ccceeecCCCCcccHhHHHhhh-------ccCCCCCCccCc
Q 003132 21 NFECGRCGICMDVV----IDRGVLDCCQHWFCFACIDNWS-------TITNLCPLCQGE 68 (845)
Q Consensus 21 ssEd~~CpICLE~f----~d~~iL~~CgHtFC~sCI~~Wl-------k~snsCPlCR~~ 68 (845)
+..+..|.||.... ........|...||..|+..-+ .....||.|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 34567999999763 3446778899999999988632 346789999643
No 174
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.26 E-value=4 Score=34.70 Aligned_cols=45 Identities=24% Similarity=0.493 Sum_probs=31.8
Q ss_pred cccccccccccccc--ceeecCCCCcccHhHHHhhh---------ccCCCCCCccCc
Q 003132 23 ECGRCGICMDVVID--RGVLDCCQHWFCFACIDNWS---------TITNLCPLCQGE 68 (845)
Q Consensus 23 Ed~~CpICLE~f~d--~~iL~~CgHtFC~sCI~~Wl---------k~snsCPlCR~~ 68 (845)
....| ||...... .+....|...||..|+.--. .....||.|+..
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 34677 89887543 24567799999999986422 246789999754
No 175
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=61.95 E-value=7.7 Score=34.78 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=26.2
Q ss_pred Ccccccccccccccccc--ee-ecCCCCcccHhHHHhhhc
Q 003132 21 NFECGRCGICMDVVIDR--GV-LDCCQHWFCFACIDNWST 57 (845)
Q Consensus 21 ssEd~~CpICLE~f~d~--~i-L~~CgHtFC~sCI~~Wlk 57 (845)
......|.+|.+.+.+- +. +..=+|.||+.|-+...+
T Consensus 12 ~~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk 51 (93)
T 2cs3_A 12 NSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIK 51 (93)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHH
T ss_pred CCCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHH
Confidence 34568999999998653 22 222369999999887654
No 176
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=60.77 E-value=6.6 Score=33.72 Aligned_cols=49 Identities=22% Similarity=0.426 Sum_probs=34.1
Q ss_pred cCcccccccccccccc---cceeecCCCCcccHhHHHhhhc-----cCCCCCCccCcc
Q 003132 20 LNFECGRCGICMDVVI---DRGVLDCCQHWFCFACIDNWST-----ITNLCPLCQGEF 69 (845)
Q Consensus 20 sssEd~~CpICLE~f~---d~~iL~~CgHtFC~sCI~~Wlk-----~snsCPlCR~~f 69 (845)
.+.+...| ||..... .-+....|...||..|+.--.. ....||.|+...
T Consensus 8 ~~~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 8 MALVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccCCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 34556677 9988752 2256778999999999864321 356899998654
No 177
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=60.70 E-value=6.2 Score=32.42 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=31.8
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCC---CCCcccCCcCCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGT---CEDTWLCPRCVAEVP 181 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~v---PegdW~CP~Cr~~~~ 181 (845)
..|.||.... .+.+++ .|++.||..|+.-.+... ..+...||.|+..+.
T Consensus 13 ~~C~IC~~~~-------~~p~~l--~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 13 VTCPICLELL-------TEPLSL--DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CEETTTTEEC-------SSCCCC--SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred CCCcCCCccc-------CCeeEC--CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 4589995332 112232 699999999998765421 123678999998843
No 178
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.21 E-value=2.7 Score=37.50 Aligned_cols=48 Identities=17% Similarity=0.204 Sum_probs=35.1
Q ss_pred Ccccccccccccccc--cceeecCCCCcccHhHHHhhh----ccCCCCCCccCc
Q 003132 21 NFECGRCGICMDVVI--DRGVLDCCQHWFCFACIDNWS----TITNLCPLCQGE 68 (845)
Q Consensus 21 ssEd~~CpICLE~f~--d~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~~ 68 (845)
..++..|.||...-. .......|...||..|+.+-+ .....||.|...
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 344568999998642 346778899999999998533 346789999653
No 179
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.27 E-value=2.2 Score=36.95 Aligned_cols=52 Identities=21% Similarity=0.286 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCccccCCCCcccccc--CCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIAC--DSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlC--DsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... +++ ..++-| .++.+.||..|+..++.. .+...||.|+..+
T Consensus 15 ~~~C~IC~~~~~---~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGD---DES-PLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCC---SSS-CEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBC
T ss_pred CCCCeEcCcccc---CCC-eeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCee
Confidence 456899953321 111 122222 233489999999988532 2346899999883
No 180
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=58.79 E-value=3.5 Score=41.16 Aligned_cols=47 Identities=17% Similarity=0.383 Sum_probs=34.0
Q ss_pred ccccccccccccc------ceeecCCCCcccHhHHHhhh------c-----cCCCCCCccCccc
Q 003132 24 CGRCGICMDVVID------RGVLDCCQHWFCFACIDNWS------T-----ITNLCPLCQGEFQ 70 (845)
Q Consensus 24 d~~CpICLE~f~d------~~iL~~CgHtFC~sCI~~Wl------k-----~snsCPlCR~~f~ 70 (845)
+..|+||...+.+ -.....|...||..|+.--. . ....||.|+....
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 4579999987743 24677899999999975321 1 2678999987644
No 181
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.24 E-value=3.2 Score=33.95 Aligned_cols=45 Identities=18% Similarity=0.255 Sum_probs=30.4
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||.... .+.+++ .|++.||..|+...+.. ...||.|+..+
T Consensus 15 ~~~C~IC~~~~-------~~~~~~--~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (71)
T 2d8t_A 15 VPECAICLQTC-------VHPVSL--PCKHVFCYLCVKGASWL----GKRCALCRQEI 59 (71)
T ss_dssp CCBCSSSSSBC-------SSEEEE--TTTEEEEHHHHHHCTTC----SSBCSSSCCBC
T ss_pred CCCCccCCccc-------CCCEEc--cCCCHHHHHHHHHHHHC----CCcCcCcCchh
Confidence 45699995332 112222 59999999999876532 36899999883
No 182
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=57.54 E-value=5.7 Score=48.60 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=41.7
Q ss_pred cccccccccccccccceeecCCCCcccHhHHHhhhccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFACIDNWSTITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sCI~~Wlk~snsCPlCR~~f~~ 71 (845)
-+.+.|||-++.+.+++++++-+++|-+.+|..|+....+||.=|..+..
T Consensus 889 P~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 889 PDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp CGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred cHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCc
Confidence 34688999999999977776444799999999999888899998877653
No 183
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=57.29 E-value=4.8 Score=35.89 Aligned_cols=44 Identities=20% Similarity=0.368 Sum_probs=30.7
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
..|.||..... +...+ .|++.||..|+...+. .+...||.|+..
T Consensus 16 ~~C~iC~~~~~-------~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~ 59 (115)
T 3l11_A 16 CQCGICMEILV-------EPVTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRR 59 (115)
T ss_dssp HBCTTTCSBCS-------SCEEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCB
T ss_pred CCCccCCcccC-------ceeEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCcc
Confidence 35889954321 12333 7999999999987753 246789999988
No 184
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.08 E-value=2 Score=35.23 Aligned_cols=48 Identities=21% Similarity=0.253 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... ....+.. -.|.+.||..|+...+.. ...||.|+..+
T Consensus 15 ~~~C~IC~~~~~-----~~~~~~~-~~C~H~f~~~Ci~~~~~~----~~~CP~Cr~~~ 62 (74)
T 2ep4_A 15 HELCAVCLEDFK-----PRDELGI-CPCKHAFHRKCLIKWLEV----RKVCPLCNMPV 62 (74)
T ss_dssp SCBCSSSCCBCC-----SSSCEEE-ETTTEEEEHHHHHHHHHH----CSBCTTTCCBC
T ss_pred CCCCcCCCcccC-----CCCcEEE-cCCCCEecHHHHHHHHHc----CCcCCCcCccc
Confidence 346899954321 1111221 259999999999876432 23799999883
No 185
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=56.61 E-value=8 Score=42.88 Aligned_cols=45 Identities=24% Similarity=0.572 Sum_probs=34.6
Q ss_pred ccccccccccccccceeec--CCCCcccHhHHHhhhc----------cCCCCCCccCc
Q 003132 23 ECGRCGICMDVVIDRGVLD--CCQHWFCFACIDNWST----------ITNLCPLCQGE 68 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~--~CgHtFC~sCI~~Wlk----------~snsCPlCR~~ 68 (845)
.+..|.||-+.- +..... .|...||..||..... ....|-+|.-.
T Consensus 92 ~~~yCr~C~~Gg-~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 92 YQSYCSICCSGE-TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SBCSCTTTCCCS-SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CcccceEcCCCC-eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 356899999873 446666 8999999999998762 25789999743
No 186
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.06 E-value=1.5 Score=34.99 Aligned_cols=52 Identities=17% Similarity=0.339 Sum_probs=32.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... +.......+..-.|++.||..|+...+.. ...||.|+..+
T Consensus 15 ~~~C~IC~~~~~--~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 66 (69)
T 2ea6_A 15 TVSCPICMDGYS--EIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKI 66 (69)
T ss_dssp CCCCTTTCCCHH--HHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCCC
T ss_pred CCCCcccCcccc--ccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCcc
Confidence 456999954321 11111123345589999999999766432 34699999873
No 187
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=55.06 E-value=4.4 Score=41.75 Aligned_cols=48 Identities=21% Similarity=0.444 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
-..|.+|...... -..|..|+..||..|+.-.... .+.-.||.|....
T Consensus 180 i~~C~iC~~iv~~--------g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~W 227 (238)
T 3nw0_A 180 VKICNICHSLLIQ--------GQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDYW 227 (238)
T ss_dssp CCBCTTTCSBCSS--------CEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCBC
T ss_pred CCcCcchhhHHhC--------CcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCCC
Confidence 5679999655432 2779899999999999765422 2345699998873
No 188
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.82 E-value=4.3 Score=33.47 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC--CCCCcccCCcCCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG--TCEDTWLCPRCVAEVP 181 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~--vPegdW~CP~Cr~~~~ 181 (845)
...|.||.... .+.+++ .|++.||..|+...+.. ...+...||.|+..+.
T Consensus 19 ~~~C~IC~~~~-------~~p~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELL-------TQPLSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCC-------SSCBCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCccc-------CCceeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 34699995432 112232 69999999998754321 0123567999998843
No 189
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=53.50 E-value=9.1 Score=37.78 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=32.2
Q ss_pred cccccccccccccceeec--CCCCcccHhHHHhhhcc----------CCCCCCccC
Q 003132 24 CGRCGICMDVVIDRGVLD--CCQHWFCFACIDNWSTI----------TNLCPLCQG 67 (845)
Q Consensus 24 d~~CpICLE~f~d~~iL~--~CgHtFC~sCI~~Wlk~----------snsCPlCR~ 67 (845)
+..|.||-+.- +..... .|...||..||...... ...|-+|.-
T Consensus 79 ~~yC~wC~~Gg-~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 79 QSYCTICCGGR-EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp BSSCTTTSCCS-EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred cceeeEecCCC-eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 56899999863 434555 69999999999987532 467999963
No 190
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=52.53 E-value=5.9 Score=34.73 Aligned_cols=47 Identities=19% Similarity=0.369 Sum_probs=30.1
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||.... .+..++ .|++.||..|+...+.. ..+...||.|+..+
T Consensus 22 ~~C~IC~~~~-------~~p~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELI-------KEPVST--KCDHIFCKFCMLKLLNQ-KKGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCC-------SSCCBC--TTSCCCCSHHHHHHHHS-SSSSCCCTTTSCCC
T ss_pred CCCcccChhh-------cCeEEC--CCCCHHHHHHHHHHHHh-CCCCCCCcCCCCcC
Confidence 3589995432 112222 69999999998765431 12446899999883
No 191
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=51.85 E-value=14 Score=33.38 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=30.7
Q ss_pred cccccccccccc-ccceeecCCCCcccHhHHHhhh----------------ccCCCCCCccCc
Q 003132 23 ECGRCGICMDVV-IDRGVLDCCQHWFCFACIDNWS----------------TITNLCPLCQGE 68 (845)
Q Consensus 23 Ed~~CpICLE~f-~d~~iL~~CgHtFC~sCI~~Wl----------------k~snsCPlCR~~ 68 (845)
.++.|.||--.- .+....-.|+.+||..|+++-. ..-.+||.|..-
T Consensus 14 ~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 578899997421 1222344589999999999851 113579999543
No 192
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=51.48 E-value=5 Score=44.28 Aligned_cols=55 Identities=24% Similarity=0.364 Sum_probs=35.1
Q ss_pred CCCCCCCCCCCCccccCCCCccccccC--CCCccccccccCCCCCCCCCC-------cccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACD--SCDLWYHAFCVGFDPEGTCED-------TWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCD--sCDraYH~~CLgPpl~~vPeg-------dW~CP~Cr~~ 179 (845)
....|.||-.... ++..-.-..|+ .|.+.||..|+..++...+.. --.||.|+..
T Consensus 307 ~~~ECaICys~~l---~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 307 EELRCNICFAYRL---DGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp SCCSCSSSCCSSC---TTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred CCccCcccceeec---CCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 4567999954321 11222346798 899999999998764322111 2459999987
No 193
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=49.53 E-value=3.4 Score=34.78 Aligned_cols=44 Identities=32% Similarity=0.615 Sum_probs=29.7
Q ss_pred cccccccccccccc---ceeec-CCCCcccHhHHHhhhc----------cCCCCCCcc
Q 003132 23 ECGRCGICMDVVID---RGVLD-CCQHWFCFACIDNWST----------ITNLCPLCQ 66 (845)
Q Consensus 23 Ed~~CpICLE~f~d---~~iL~-~CgHtFC~sCI~~Wlk----------~snsCPlCR 66 (845)
....|++|...+.+ -+... .|...||..|+.--.. ....||.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 34689999998643 24566 8999999999753221 145688875
No 194
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=49.07 E-value=3.8 Score=38.01 Aligned_cols=43 Identities=19% Similarity=0.486 Sum_probs=28.9
Q ss_pred CCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 125 GCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 125 ~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
.|.||..... +..++ .|++.||..|+.-.+.. .-.||.|+..+
T Consensus 55 ~C~iC~~~~~-------~~~~~--~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 97 (138)
T 4ayc_A 55 QCIICSEYFI-------EAVTL--NCAHSFCSYCINEWMKR----KIECPICRKDI 97 (138)
T ss_dssp BCTTTCSBCS-------SEEEE--TTSCEEEHHHHHHHTTT----CSBCTTTCCBC
T ss_pred CCcccCcccC-------CceEC--CCCCCccHHHHHHHHHc----CCcCCCCCCcC
Confidence 5999954321 12222 59999999998765432 34699999883
No 195
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=48.75 E-value=2.2 Score=35.14 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=31.0
Q ss_pred CCCCCCCCCCCccccCCCCcccccc--CCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIAC--DSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlC--DsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.||... .++ ..+.-| .+.-+.||..|+...+. ..+.+.|+.|...
T Consensus 6 ~~~CrIC~~~-----~~~-~l~~PC~C~gs~~~~H~~Cl~~W~~--~~~~~~C~~C~~~ 56 (60)
T 1vyx_A 6 VPVCWICNEE-----LGN-ERFRACGCTGELENVHRSCLSTWLT--ISRNTACQICGVV 56 (60)
T ss_dssp CCEETTTTEE-----CSC-CCCCSCCCSSGGGSCCHHHHHHHHH--HHTCSBCTTTCCB
T ss_pred CCEeEEeecC-----CCC-ceecCcCCCCchhhhHHHHHHHHHH--hCCCCccCCCCCe
Confidence 4568899532 112 234444 23334899999998853 1246899999987
No 196
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=48.12 E-value=4.6 Score=34.19 Aligned_cols=48 Identities=19% Similarity=0.450 Sum_probs=32.8
Q ss_pred ccCccccccccccccccc--ceeecCCCCcccHhHHHhhhc---cCCCCCCccC
Q 003132 19 LLNFECGRCGICMDVVID--RGVLDCCQHWFCFACIDNWST---ITNLCPLCQG 67 (845)
Q Consensus 19 ssssEd~~CpICLE~f~d--~~iL~~CgHtFC~sCI~~Wlk---~snsCPlCR~ 67 (845)
....+...| ||...... -+....|...||..|+..-.. ....||.|+.
T Consensus 14 ~~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 14 LYFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp CTTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 334456778 99886543 245677999999999865322 3567888864
No 197
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=47.83 E-value=3.8 Score=36.80 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=29.7
Q ss_pred ccCccccccccccccc-ccceeecCCC---CcccHhHHHhhh--ccCCCCCC-ccC
Q 003132 19 LLNFECGRCGICMDVV-IDRGVLDCCQ---HWFCFACIDNWS--TITNLCPL-CQG 67 (845)
Q Consensus 19 ssssEd~~CpICLE~f-~d~~iL~~Cg---HtFC~sCI~~Wl--k~snsCPl-CR~ 67 (845)
....+...| ||.... ...+..+.|. ..||..|+.--. .....||. |+.
T Consensus 21 ~~~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 21 NNNQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp ---CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 334455678 999743 3334456654 789999986321 24678999 974
No 198
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=47.54 E-value=2.3 Score=37.48 Aligned_cols=46 Identities=20% Similarity=0.333 Sum_probs=32.2
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||.... ...+.|-.|++.||..|+...+.. ....||.|+..+
T Consensus 23 ~~C~IC~~~~--------~~p~~~~~CgH~FC~~Ci~~~~~~---~~~~CP~Cr~~~ 68 (100)
T 3lrq_A 23 FRCFICMEKL--------RDARLCPHCSKLCCFSCIRRWLTE---QRAQCPHCRAPL 68 (100)
T ss_dssp TBCTTTCSBC--------SSEEECTTTCCEEEHHHHHHHHHH---TCSBCTTTCCBC
T ss_pred CCCccCCccc--------cCccccCCCCChhhHHHHHHHHHH---CcCCCCCCCCcC
Confidence 4589995432 123566789999999999866432 126799999984
No 199
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=47.50 E-value=3.1 Score=37.68 Aligned_cols=46 Identities=13% Similarity=0.252 Sum_probs=30.6
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEVP 181 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~~ 181 (845)
..|.||..... +.+.+ .|++.||..|+..... .....||.|+..+.
T Consensus 53 ~~C~IC~~~~~-------~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~ 98 (124)
T 3fl2_A 53 FQCICCQELVF-------RPITT--VCQHNVCKDCLDRSFR---AQVFSCPACRYDLG 98 (124)
T ss_dssp TBCTTTSSBCS-------SEEEC--TTSCEEEHHHHHHHHH---TTCCBCTTTCCBCC
T ss_pred CCCCcCChHHc-------CcEEe--eCCCcccHHHHHHHHh---HCcCCCCCCCccCC
Confidence 46999954321 12332 7999999999876542 23457999999843
No 200
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=47.44 E-value=12 Score=41.41 Aligned_cols=50 Identities=24% Similarity=0.378 Sum_probs=37.5
Q ss_pred cccccccccccccccceeecCCCCcccHhH--HHhhh--ccCCCCCCccCccce
Q 003132 22 FECGRCGICMDVVIDRGVLDCCQHWFCFAC--IDNWS--TITNLCPLCQGEFQL 71 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL~~CgHtFC~sC--I~~Wl--k~snsCPlCR~~f~~ 71 (845)
.-...|||-+..+..++....|.|.-|++- +-... .....||+|...+.+
T Consensus 247 ~vSL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 247 IMSLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp EEESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred EEeecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 345789999999988899999999977765 22222 346789999887643
No 201
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.87 E-value=7.8 Score=32.38 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||..... +. .....++ .|++.||..|+.-.+... .....||.|+..+
T Consensus 15 ~~~C~IC~~~~~--~~-~~~~~~~--~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 15 VLECPICMESFT--EE-QLRPKLL--HCGHTICRQCLEKLLASS-INGVRCPFCSKIT 66 (88)
T ss_dssp CCBCTTTCCBCC--TT-SSCEEEC--SSSCEEEHHHHHHHHHHC-SSCBCCTTTCCCB
T ss_pred CCCCccCCcccc--cc-CCCeEEC--CCCChhhHHHHHHHHHcC-CCCcCCCCCCCcc
Confidence 346899954321 11 1002222 699999999988664321 2357899999883
No 202
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=46.41 E-value=3.3 Score=39.33 Aligned_cols=46 Identities=17% Similarity=0.328 Sum_probs=31.6
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||..... ..+.+..|++.||..|+.-.+. .+...||.|+..+
T Consensus 55 ~~C~IC~~~~~--------~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 55 LMCPICLDMLK--------NTMTTKECLHRFCADCIITALR---SGNKECPTCRKKL 100 (165)
T ss_dssp HBCTTTSSBCS--------SEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCcccChHhh--------CcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCcC
Confidence 36999954321 1244458999999999876643 2356799999883
No 203
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=46.10 E-value=4.8 Score=38.77 Aligned_cols=46 Identities=26% Similarity=0.423 Sum_probs=32.5
Q ss_pred cccccccccccccc---cceeecCCCCcccHhHHHhhh-----ccCCCCCCccCc
Q 003132 22 FECGRCGICMDVVI---DRGVLDCCQHWFCFACIDNWS-----TITNLCPLCQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~---d~~iL~~CgHtFC~sCI~~Wl-----k~snsCPlCR~~ 68 (845)
.+...| ||..... .-.....|..+||..|+.--. .....||.|+..
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 345678 9988643 235677899999999986422 236789999854
No 204
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.64 E-value=5.4 Score=32.07 Aligned_cols=45 Identities=11% Similarity=0.234 Sum_probs=30.0
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||.... . +.++ -.|++.||..|+...+. .....||.|+..+
T Consensus 16 ~~C~IC~~~~--~-----~p~~--~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 16 YKCEKCHLVL--C-----SPKQ--TECGHRFCESCMAALLS---SSSPKCTACQESI 60 (66)
T ss_dssp EECTTTCCEE--S-----SCCC--CSSSCCCCHHHHHHHHT---TSSCCCTTTCCCC
T ss_pred CCCCCCChHh--c-----CeeE--CCCCCHHHHHHHHHHHH---hCcCCCCCCCcCC
Confidence 4589995331 1 1122 37999999999886643 2456799999883
No 205
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=45.31 E-value=7 Score=40.47 Aligned_cols=43 Identities=23% Similarity=0.451 Sum_probs=28.6
Q ss_pred ccccccccc--cccceeecCCCCcccHhHHHhhh----cc-CCCCCCccC
Q 003132 25 GRCGICMDV--VIDRGVLDCCQHWFCFACIDNWS----TI-TNLCPLCQG 67 (845)
Q Consensus 25 ~~CpICLE~--f~d~~iL~~CgHtFC~sCI~~Wl----k~-snsCPlCR~ 67 (845)
..|.+|... .........|...||..|+.+=+ .. ...||.|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 368888863 23446778899999999998643 23 578999964
No 206
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=45.18 E-value=13 Score=40.81 Aligned_cols=49 Identities=18% Similarity=0.295 Sum_probs=36.9
Q ss_pred ccccccccccccccceeecCCCCcccHhHH--Hhhh--ccCCCCCCccCccce
Q 003132 23 ECGRCGICMDVVIDRGVLDCCQHWFCFACI--DNWS--TITNLCPLCQGEFQL 71 (845)
Q Consensus 23 Ed~~CpICLE~f~d~~iL~~CgHtFC~sCI--~~Wl--k~snsCPlCR~~f~~ 71 (845)
-...|||-+..+..++....|.|.-|++-. -... .....||+|...+.+
T Consensus 214 vSL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 214 VSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp EESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred EeeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 356899999999888999999999776642 2222 346789999987653
No 207
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=44.94 E-value=3.3 Score=37.76 Aligned_cols=45 Identities=29% Similarity=0.572 Sum_probs=31.9
Q ss_pred cccccccccccc---ceeec-CCCCcccHhHHHhhh----------ccCCCCCCccCcc
Q 003132 25 GRCGICMDVVID---RGVLD-CCQHWFCFACIDNWS----------TITNLCPLCQGEF 69 (845)
Q Consensus 25 ~~CpICLE~f~d---~~iL~-~CgHtFC~sCI~~Wl----------k~snsCPlCR~~f 69 (845)
..|+||...+.+ ..... .|...||..|+.--. .....||.|+...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 579999998633 24454 799999999975321 1456899998654
No 208
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=44.24 E-value=23 Score=31.74 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=29.0
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
.-.|.||..... +..+ -..|++.||..|+.-.+. ..||.|+..+
T Consensus 22 ~~~C~IC~~~~~-------~pv~-~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILR-------EPVC-LGGCEHIFCSNCVSDCIG------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCS-------SCBC-CCSSSCCBCTTTGGGGTT------TBCSSSCCBC
T ss_pred CCCCCCCChHhh-------CccE-eCCCCCHHHHHHHHHHhc------CCCcCCCCcC
Confidence 346899954321 1122 226888899999876643 5699999884
No 209
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=44.12 E-value=9.2 Score=32.45 Aligned_cols=43 Identities=23% Similarity=0.487 Sum_probs=30.1
Q ss_pred cccccccc--cccceeecCCCCcccHhHHHhhh----cc-CCCCCCccCc
Q 003132 26 RCGICMDV--VIDRGVLDCCQHWFCFACIDNWS----TI-TNLCPLCQGE 68 (845)
Q Consensus 26 ~CpICLE~--f~d~~iL~~CgHtFC~sCI~~Wl----k~-snsCPlCR~~ 68 (845)
.|.||... .........|...||..|+.+-+ .. ...||.|...
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 56677753 23446677899999999998533 23 6789999753
No 210
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.33 E-value=7.4 Score=33.78 Aligned_cols=43 Identities=19% Similarity=0.370 Sum_probs=31.3
Q ss_pred ccccccccc--cccceeecCCCCcccHhHHHhhh----cc-CCCCCCccC
Q 003132 25 GRCGICMDV--VIDRGVLDCCQHWFCFACIDNWS----TI-TNLCPLCQG 67 (845)
Q Consensus 25 ~~CpICLE~--f~d~~iL~~CgHtFC~sCI~~Wl----k~-snsCPlCR~ 67 (845)
..|.||... .........|...||..|+.+-+ .. ...||.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 378899853 23446778899999999998543 23 568999964
No 211
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=43.07 E-value=6.8 Score=32.24 Aligned_cols=50 Identities=18% Similarity=0.412 Sum_probs=30.9
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCC--CCCCcccCCcCCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEG--TCEDTWLCPRCVAEVP 181 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~--vPegdW~CP~Cr~~~~ 181 (845)
...|.||..... +.++ . .|++.||..|+...+.. ...+...||.|+..+.
T Consensus 19 ~~~C~IC~~~~~-------~p~~-~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 19 EVTCPICLELLK-------EPVS-A-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp TTSCTTTCSCCS-------SCEE-C-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred CCCCcCCChhhC-------ccee-C-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 346999953321 1122 2 59999999998754321 1224678999998843
No 212
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.68 E-value=42 Score=26.34 Aligned_cols=41 Identities=17% Similarity=0.233 Sum_probs=26.4
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
...|.||..... +..++ .|++.||..|+... ...||.|+..
T Consensus 6 ~~~C~IC~~~~~-------~p~~l--~CgH~fC~~Ci~~~-------~~~CP~Cr~~ 46 (56)
T 1bor_A 6 FLRCQQCQAEAK-------CPKLL--PCLHTLCSGCLEAS-------GMQCPICQAP 46 (56)
T ss_dssp CSSCSSSCSSCB-------CCSCS--TTSCCSBTTTCSSS-------SSSCSSCCSS
T ss_pred CCCceEeCCccC-------CeEEc--CCCCcccHHHHccC-------CCCCCcCCcE
Confidence 346899954321 11222 48888888887652 3469999988
No 213
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=36.86 E-value=6.4 Score=34.03 Aligned_cols=38 Identities=18% Similarity=0.479 Sum_probs=26.3
Q ss_pred cccccc--cccccc-----cceeec-----CCCCcccHhHHHhhhccCCCCC
Q 003132 24 CGRCGI--CMDVVI-----DRGVLD-----CCQHWFCFACIDNWSTITNLCP 63 (845)
Q Consensus 24 d~~CpI--CLE~f~-----d~~iL~-----~CgHtFC~sCI~~Wlk~snsCP 63 (845)
-.-||- |-..+. ..+..+ .|+|.||+.|...|.. ..|.
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~wH~--~~C~ 74 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHE--GECS 74 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEECCS--SCSS
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccccC--Cccc
Confidence 456777 766542 124454 6999999999999976 4564
No 214
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=36.44 E-value=24 Score=29.56 Aligned_cols=41 Identities=29% Similarity=0.515 Sum_probs=30.1
Q ss_pred ccccccccccccc--eeecCCCCcccHhHHHhhhccCCCCCCc
Q 003132 25 GRCGICMDVVIDR--GVLDCCQHWFCFACIDNWSTITNLCPLC 65 (845)
Q Consensus 25 ~~CpICLE~f~d~--~iL~~CgHtFC~sCI~~Wlk~snsCPlC 65 (845)
..|..|...|.+. ...+.|.+.||.+|=.--...-..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4699999988553 4578899999999943323444579988
No 215
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=36.25 E-value=7.1 Score=32.52 Aligned_cols=45 Identities=31% Similarity=0.670 Sum_probs=29.0
Q ss_pred cccccccccccccc-cceeecC--CC-CcccHhHHHhhh--ccCCCCCCccC
Q 003132 22 FECGRCGICMDVVI-DRGVLDC--CQ-HWFCFACIDNWS--TITNLCPLCQG 67 (845)
Q Consensus 22 sEd~~CpICLE~f~-d~~iL~~--Cg-HtFC~sCI~~Wl--k~snsCPlCR~ 67 (845)
.+...| ||..... ....... |. ..||..|+.--. .....||.|+.
T Consensus 9 ~e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 9 NEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRG 59 (62)
T ss_dssp -CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHT
T ss_pred CCCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCccc
Confidence 445677 9988532 2244556 55 799999987422 23667999964
No 216
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=35.50 E-value=26 Score=31.91 Aligned_cols=53 Identities=26% Similarity=0.524 Sum_probs=39.1
Q ss_pred CCCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 122 DGDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 122 D~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
..+.|.||+.... -..+-+..+.|..|.-..+..|+.-- ..++.-.||+|...
T Consensus 15 ~~qiCqiCGD~VG--~~~~Ge~FVAC~eC~FPvCrpCyEYE---rkeG~q~CpqCktr 67 (93)
T 1weo_A 15 DGQFCEICGDQIG--LTVEGDLFVACNECGFPACRPCYEYE---RREGTQNCPQCKTR 67 (93)
T ss_dssp SSCBCSSSCCBCC--BCSSSSBCCSCSSSCCCCCHHHHHHH---HHTSCSSCTTTCCC
T ss_pred CCCccccccCccc--cCCCCCEEEeeeccCChhhHHHHHHH---HhccCccccccCCc
Confidence 4467999975433 33344568899999888888887765 45678889999988
No 217
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=35.21 E-value=10 Score=31.93 Aligned_cols=47 Identities=23% Similarity=0.262 Sum_probs=31.9
Q ss_pred Cccccccccccccccc---ceeecCCCCcccHhHHHhhh----ccCCCCCCccCc
Q 003132 21 NFECGRCGICMDVVID---RGVLDCCQHWFCFACIDNWS----TITNLCPLCQGE 68 (845)
Q Consensus 21 ssEd~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~Wl----k~snsCPlCR~~ 68 (845)
..+...| ||.....+ .+....|...||..|+.--. .....||.|+..
T Consensus 13 ~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 13 DNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 3445678 79876422 35567799999999986532 235679999643
No 218
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=34.42 E-value=10 Score=28.72 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=11.8
Q ss_pred Cccccccccccccccc
Q 003132 21 NFECGRCGICMDVVID 36 (845)
Q Consensus 21 ssEd~~CpICLE~f~d 36 (845)
+++++.|||||..+..
T Consensus 2 ~~EGFiCP~C~~~l~s 17 (34)
T 3mjh_B 2 SSEGFICPQCMKSLGS 17 (34)
T ss_dssp CSEEEECTTTCCEESS
T ss_pred CCcccCCcHHHHHcCC
Confidence 3567888888887764
No 219
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=32.95 E-value=6.7 Score=35.48 Aligned_cols=26 Identities=19% Similarity=0.323 Sum_probs=21.6
Q ss_pred cCCCCccccccccCCCCCCCCCCcccCCcCCCC
Q 003132 147 CDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAE 179 (845)
Q Consensus 147 CDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~ 179 (845)
|+.|+..||++|++.+ .|.|..|...
T Consensus 18 C~~C~~c~~~~~~~~~-------~~~~~~c~~~ 43 (117)
T 4bbq_A 18 CGVCHYCRDMKKFGGP-------GRMKQSCVLR 43 (117)
T ss_dssp CSCSHHHHHSGGGTSC-------CCSCCCCGGG
T ss_pred CCCCCCCcCCcccCCC-------Cccccchhhe
Confidence 9999999999999987 3777777654
No 220
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=31.96 E-value=15 Score=31.20 Aligned_cols=48 Identities=21% Similarity=0.369 Sum_probs=32.5
Q ss_pred cCcccccccccccccc---cceeecCCCCcccHhHHHhhhc-----cCCCCCCccCc
Q 003132 20 LNFECGRCGICMDVVI---DRGVLDCCQHWFCFACIDNWST-----ITNLCPLCQGE 68 (845)
Q Consensus 20 sssEd~~CpICLE~f~---d~~iL~~CgHtFC~sCI~~Wlk-----~snsCPlCR~~ 68 (845)
.+.+...| ||...+. .-.....|.-.||..|+.--.. ....||.|+..
T Consensus 6 ~~~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 6 MATVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp TCCCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CCCCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 34455667 8987653 2245677999999999965321 35789999754
No 221
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=31.24 E-value=9 Score=41.13 Aligned_cols=47 Identities=15% Similarity=0.316 Sum_probs=33.4
Q ss_pred cccccccccccccccceee-----cCCCCcccHhHHHhhhccCCCCCCccCc
Q 003132 22 FECGRCGICMDVVIDRGVL-----DCCQHWFCFACIDNWSTITNLCPLCQGE 68 (845)
Q Consensus 22 sEd~~CpICLE~f~d~~iL-----~~CgHtFC~sCI~~Wlk~snsCPlCR~~ 68 (845)
.....||+|...-.-..+. ..=.|.+|.-|-..|......||.|...
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 4467999999863211111 1123569999999999999999999865
No 222
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=29.69 E-value=10 Score=32.85 Aligned_cols=45 Identities=20% Similarity=0.321 Sum_probs=29.9
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||..... + -+..-.|++.||..|+...+.. ...||.|+..+
T Consensus 23 ~~C~IC~~~~~-------~-p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 67 (99)
T 2y43_A 23 LRCGICFEYFN-------I-AMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVTV 67 (99)
T ss_dssp TBCTTTCSBCS-------S-EEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCBC
T ss_pred CCcccCChhhC-------C-cCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCcC
Confidence 46899954321 1 1223479999999998766432 35799999883
No 223
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=29.10 E-value=9.4 Score=31.94 Aligned_cols=44 Identities=25% Similarity=0.528 Sum_probs=26.9
Q ss_pred ccccccccccccccc--eeec--CCCCcccHhHHHhhh---c-----cCCCCCCccC
Q 003132 23 ECGRCGICMDVVIDR--GVLD--CCQHWFCFACIDNWS---T-----ITNLCPLCQG 67 (845)
Q Consensus 23 Ed~~CpICLE~f~d~--~iL~--~CgHtFC~sCI~~Wl---k-----~snsCPlCR~ 67 (845)
+...| ||.....+. +... .|...||..|+.--. . ....||.||.
T Consensus 9 ~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 9 AKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp CEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 34567 897654332 2333 388899999974211 1 1467999973
No 224
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=28.22 E-value=12 Score=31.02 Aligned_cols=34 Identities=24% Similarity=0.668 Sum_probs=22.8
Q ss_pred cccccccccccc-----ceeecC--CCCcccHhHHHhhhcc
Q 003132 25 GRCGICMDVVID-----RGVLDC--CQHWFCFACIDNWSTI 58 (845)
Q Consensus 25 ~~CpICLE~f~d-----~~iL~~--CgHtFC~sCI~~Wlk~ 58 (845)
..||-|.-.+.. .++... |++.||..|...|...
T Consensus 7 k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~~ 47 (60)
T 1wd2_A 7 KECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPH 47 (60)
T ss_dssp CCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGG
T ss_pred eECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcccC
Confidence 579988887742 133333 7788888888777643
No 225
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=28.08 E-value=19 Score=31.33 Aligned_cols=42 Identities=24% Similarity=0.480 Sum_probs=28.0
Q ss_pred cccccccccc--cceeecCCCCcccHhHHHhhhc----cC-CCCCCccC
Q 003132 26 RCGICMDVVI--DRGVLDCCQHWFCFACIDNWST----IT-NLCPLCQG 67 (845)
Q Consensus 26 ~CpICLE~f~--d~~iL~~CgHtFC~sCI~~Wlk----~s-nsCPlCR~ 67 (845)
.|.||...-. .......|...||..|+.+-+. .. ..||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 4666655421 2356677999999999986543 24 78999974
No 226
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=27.45 E-value=12 Score=35.65 Aligned_cols=46 Identities=13% Similarity=0.220 Sum_probs=30.2
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEVP 181 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~~ 181 (845)
..|.||..... +..+ -.|+..||..|+...+.. +...||.|+..+.
T Consensus 79 ~~C~IC~~~~~-------~pv~--~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~~ 124 (150)
T 1z6u_A 79 FMCVCCQELVY-------QPVT--TECFHNVCKDCLQRSFKA---QVFSCPACRHDLG 124 (150)
T ss_dssp TBCTTTSSBCS-------SEEE--CTTSCEEEHHHHHHHHHT---TCCBCTTTCCBCC
T ss_pred CEeecCChhhc-------CCEE--cCCCCchhHHHHHHHHHh---CCCcCCCCCccCC
Confidence 46999954321 1222 379989999998766431 3457999999843
No 227
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=26.60 E-value=12 Score=32.91 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=30.3
Q ss_pred CCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 124 DGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 124 ~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
..|.||..... + .+....|++.||..|+.-.+.. ...||.|+..+
T Consensus 16 ~~C~IC~~~~~-------~-p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 60 (108)
T 2ckl_A 16 LMCVLCGGYFI-------D-ATTIIECLHSFCKTCIVRYLET----SKYCPICDVQV 60 (108)
T ss_dssp TBCTTTSSBCS-------S-EEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCBS
T ss_pred CCCccCChHHh-------C-cCEeCCCCChhhHHHHHHHHHh----CCcCcCCCccc
Confidence 35899954321 1 2334579999999998766432 26799999883
No 228
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=25.32 E-value=6.5 Score=36.28 Aligned_cols=27 Identities=26% Similarity=0.526 Sum_probs=17.9
Q ss_pred ccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 154 YHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 154 YH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
+|.+|++.-......++-.||.|+..+
T Consensus 21 kHvFCydCa~~~~~~~~k~Cp~C~~~V 47 (101)
T 3vk6_A 21 KHVFCYDCAILHEKKGDKMCPGCSDPV 47 (101)
T ss_dssp CCEEEHHHHHHHHHTTCCBCTTTCCBC
T ss_pred cccHHHHHHHHHHhccCCCCcCcCCee
Confidence 478887766322223566799999883
No 229
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=24.56 E-value=12 Score=32.63 Aligned_cols=29 Identities=28% Similarity=0.704 Sum_probs=21.8
Q ss_pred ccccccccc-----cceeecCCCCcccHhHHHhh
Q 003132 27 CGICMDVVI-----DRGVLDCCQHWFCFACIDNW 55 (845)
Q Consensus 27 CpICLE~f~-----d~~iL~~CgHtFC~sCI~~W 55 (845)
||-|-..+. ..+..+.|++.||+.|-..|
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w 61 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQW 61 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBC
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCch
Confidence 887766542 12566679999999999999
No 230
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=24.24 E-value=51 Score=29.02 Aligned_cols=33 Identities=24% Similarity=0.407 Sum_probs=24.3
Q ss_pred cccccccccccccc---ceeecCCCCcccHhHHHhh
Q 003132 23 ECGRCGICMDVVID---RGVLDCCQHWFCFACIDNW 55 (845)
Q Consensus 23 Ed~~CpICLE~f~d---~~iL~~CgHtFC~sCI~~W 55 (845)
+...|.+|...|.- +--.-.||+.||..|...+
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 34679999988742 2445679999999997653
No 231
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=24.11 E-value=20 Score=39.02 Aligned_cols=22 Identities=23% Similarity=0.353 Sum_probs=16.7
Q ss_pred hhheeccccccccCCCCCccch
Q 003132 674 LSRLYLADTSVFPRKDNIMPLS 695 (845)
Q Consensus 674 lsrlylad~sv~pr~~~~~pl~ 695 (845)
+..||+||+||||.--..-|-.
T Consensus 486 v~nL~VvDaSv~P~~~~~np~~ 507 (526)
T 3t37_A 486 LDNLFVVDASIMPNLTAGPIHA 507 (526)
T ss_dssp CSSEEECSGGGCSSCCSSCCHH
T ss_pred CCCeEEEEcCcccCCcChHHHH
Confidence 3569999999999866555543
No 232
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=23.02 E-value=36 Score=33.12 Aligned_cols=45 Identities=20% Similarity=0.405 Sum_probs=32.8
Q ss_pred ccccccccccccc----cceeecCCCCcccHhHHHhhhc--cCCCCCCccCc
Q 003132 23 ECGRCGICMDVVI----DRGVLDCCQHWFCFACIDNWST--ITNLCPLCQGE 68 (845)
Q Consensus 23 Ed~~CpICLE~f~----d~~iL~~CgHtFC~sCI~~Wlk--~snsCPlCR~~ 68 (845)
.+..|.+|...|. .......|.|.+|..|-. |.. ....|-+|+..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~-~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH-AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE-CCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc-ccCCCCcEeeHHHHHH
Confidence 3579999999863 236777799999999973 332 34568888654
No 233
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=22.11 E-value=40 Score=28.80 Aligned_cols=50 Identities=18% Similarity=0.446 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCccccCCCCccccccCCCCccccccccCCCCCCCCCCcccCCcCCCCC
Q 003132 123 GDGCKIRSGSMVAEESSNLDTSIACDSCDLWYHAFCVGFDPEGTCEDTWLCPRCVAEV 180 (845)
Q Consensus 123 ~~~C~ICgGs~~~~dddned~mLlCDsCDraYH~~CLgPpl~~vPegdW~CP~Cr~~~ 180 (845)
...|.||...... .+. ..+-| .|++.|+..|+.-... .+...||.|+..+
T Consensus 11 ~~~CpICle~~~~---~d~-~~~p~-~CGH~fC~~Cl~~~~~---~~~~~CP~CR~~~ 60 (78)
T 1e4u_A 11 PVECPLCMEPLEI---DDI-NFFPC-TCGYQICRFCWHRIRT---DENGLCPACRKPY 60 (78)
T ss_dssp CCBCTTTCCBCCT---TTT-TCCSS-TTSCCCCHHHHHHHTT---SSCSBCTTTCCBC
T ss_pred CCcCCccCccCcc---ccc-ccccc-CCCCCcCHHHHHHHHh---cCCCCCCCCCCcc
Confidence 3468999543210 010 11223 5888899999864432 2567899999983
No 234
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=21.43 E-value=23 Score=40.17 Aligned_cols=47 Identities=21% Similarity=0.320 Sum_probs=32.5
Q ss_pred Ccccccccccccccc---cceeecCCCCcccHhHHHhhhc-----cCCCCCCccCc
Q 003132 21 NFECGRCGICMDVVI---DRGVLDCCQHWFCFACIDNWST-----ITNLCPLCQGE 68 (845)
Q Consensus 21 ssEd~~CpICLE~f~---d~~iL~~CgHtFC~sCI~~Wlk-----~snsCPlCR~~ 68 (845)
+.+...| ||..... .-..+..|...||..|+.--.. ....||.|+..
T Consensus 34 ~~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 34 PPPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 3445567 9988642 2356778999999999864322 24789999854
No 235
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=20.01 E-value=23 Score=39.85 Aligned_cols=45 Identities=24% Similarity=0.359 Sum_probs=30.9
Q ss_pred cccccccccccc---cceeecCCCCcccHhHHHhhhc-----cCCCCCCccCcc
Q 003132 24 CGRCGICMDVVI---DRGVLDCCQHWFCFACIDNWST-----ITNLCPLCQGEF 69 (845)
Q Consensus 24 d~~CpICLE~f~---d~~iL~~CgHtFC~sCI~~Wlk-----~snsCPlCR~~f 69 (845)
...| ||..... .-..+..|...||..|+.--.. ....||.|+...
T Consensus 5 ~~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 5 PVYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CeEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 3455 8988652 2256778999999999864221 357899997653
Done!