Query 003134
Match_columns 845
No_of_seqs 860 out of 6532
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:30:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 3.8E-42 1.3E-46 374.9 20.1 295 35-367 2-307 (313)
2 4eco_A Uncharacterized protein 100.0 8.3E-41 2.8E-45 399.3 21.6 349 37-396 28-504 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 3.1E-39 1.1E-43 393.3 26.3 352 34-397 264-745 (876)
4 3rgz_A Protein brassinosteroid 100.0 1.8E-39 6E-44 396.4 18.6 336 33-394 6-382 (768)
5 3rgz_A Protein brassinosteroid 100.0 2.8E-37 9.5E-42 377.0 24.1 277 94-370 370-722 (768)
6 3v47_A TOLL-like receptor 5B a 100.0 4.6E-36 1.6E-40 343.8 19.9 278 92-369 30-388 (455)
7 2id5_A Lingo-1, leucine rich r 100.0 2.8E-35 9.4E-40 339.7 20.6 286 91-384 31-344 (477)
8 4eco_A Uncharacterized protein 100.0 1E-34 3.5E-39 346.6 18.0 284 103-395 194-528 (636)
9 4g8a_A TOLL-like receptor 4; l 100.0 5.3E-34 1.8E-38 339.8 22.6 308 91-411 51-613 (635)
10 1ogq_A PGIP-2, polygalacturona 100.0 2.7E-34 9.2E-39 312.9 15.8 246 116-391 50-302 (313)
11 4fcg_A Uncharacterized protein 100.0 7.9E-34 2.7E-38 311.2 17.2 277 32-343 20-314 (328)
12 3t6q_A CD180 antigen; protein- 100.0 1.9E-33 6.6E-38 334.1 21.4 288 93-390 255-577 (606)
13 3vq2_A TLR4, TOLL-like recepto 100.0 3.3E-33 1.1E-37 332.1 23.0 134 92-225 32-167 (606)
14 3v47_A TOLL-like receptor 5B a 100.0 9.6E-33 3.3E-37 316.2 22.2 295 96-398 14-389 (455)
15 2id5_A Lingo-1, leucine rich r 100.0 1.2E-32 4.2E-37 317.5 23.2 297 96-399 15-315 (477)
16 3j0a_A TOLL-like receptor 5; m 100.0 8E-33 2.7E-37 341.1 22.8 93 300-392 474-579 (844)
17 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-32 6.3E-37 319.6 20.5 136 92-233 21-162 (520)
18 4fih_A Serine/threonine-protei 100.0 4.8E-33 1.7E-37 303.5 14.2 160 676-845 74-234 (346)
19 1ziw_A TOLL-like receptor 3; i 100.0 4.5E-32 1.5E-36 326.8 23.8 293 92-392 329-642 (680)
20 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.1E-32 1.7E-36 319.0 23.6 296 92-398 52-491 (562)
21 2z7x_B TOLL-like receptor 1, v 100.0 3.6E-32 1.2E-36 317.1 21.1 284 92-390 45-499 (520)
22 4asz_A BDNF/NT-3 growth factor 100.0 2.6E-33 8.8E-38 301.6 10.3 167 676-845 13-194 (299)
23 4aoj_A High affinity nerve gro 100.0 6.3E-33 2.1E-37 302.6 13.2 167 676-845 41-224 (329)
24 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-32 3.4E-37 296.6 14.1 162 676-845 32-198 (311)
25 2z81_A CD282 antigen, TOLL-lik 100.0 6.1E-32 2.1E-36 317.2 21.9 296 92-395 26-446 (549)
26 3t6q_A CD180 antigen; protein- 100.0 7.4E-32 2.5E-36 320.4 22.5 300 91-395 32-391 (606)
27 4b9d_A Serine/threonine-protei 100.0 5.6E-33 1.9E-37 303.4 11.0 163 676-845 24-189 (350)
28 3o6n_A APL1; leucine-rich repe 100.0 5.8E-32 2E-36 303.6 19.1 286 92-394 45-353 (390)
29 4fie_A Serine/threonine-protei 100.0 2.5E-32 8.6E-37 305.1 15.9 160 676-845 151-311 (423)
30 3oja_B Anopheles plasmodium-re 100.0 7.8E-32 2.7E-36 319.6 21.1 287 92-395 51-360 (597)
31 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2E-31 6.7E-36 314.0 22.5 284 91-389 75-527 (562)
32 3omv_A RAF proto-oncogene seri 100.0 3E-32 1E-36 293.4 13.8 161 675-845 35-198 (307)
33 3j0a_A TOLL-like receptor 5; m 100.0 2.4E-31 8.1E-36 328.0 23.7 301 91-395 23-377 (844)
34 4ecn_A Leucine-rich repeat pro 100.0 2.3E-31 7.8E-36 324.2 22.9 262 92-361 491-785 (876)
35 4gt4_A Tyrosine-protein kinase 100.0 2.5E-32 8.6E-37 295.1 11.8 165 678-845 28-211 (308)
36 3zyi_A Leucine-rich repeat-con 100.0 2.2E-31 7.4E-36 305.1 20.2 257 96-388 58-318 (452)
37 2z63_A TOLL-like receptor 4, v 100.0 4.1E-31 1.4E-35 311.4 22.0 302 92-397 28-511 (570)
38 2z63_A TOLL-like receptor 4, v 100.0 2.6E-31 8.7E-36 313.2 20.0 178 211-389 347-548 (570)
39 2z80_A TOLL-like receptor 2, v 100.0 8.4E-32 2.9E-36 298.2 14.2 266 117-391 53-333 (353)
40 3zyj_A Leucine-rich repeat-con 100.0 3.8E-31 1.3E-35 302.0 19.8 257 96-388 47-307 (440)
41 1xku_A Decorin; proteoglycan, 100.0 1.5E-30 5.3E-35 285.2 23.6 273 92-374 31-317 (330)
42 1ziw_A TOLL-like receptor 3; i 100.0 1.6E-30 5.3E-35 313.4 24.7 297 91-391 24-364 (680)
43 2z81_A CD282 antigen, TOLL-lik 100.0 4.3E-31 1.5E-35 310.0 19.2 118 92-209 50-170 (549)
44 2ft3_A Biglycan; proteoglycan, 100.0 1E-30 3.5E-35 286.9 20.3 271 92-373 33-317 (332)
45 3ubd_A Ribosomal protein S6 ki 100.0 4.8E-32 1.6E-36 291.2 9.2 161 676-845 24-190 (304)
46 3hyh_A Carbon catabolite-derep 100.0 2E-31 6.8E-36 282.5 13.7 159 676-845 13-175 (275)
47 3fpq_A Serine/threonine-protei 100.0 2.1E-31 7.1E-36 284.8 13.9 158 679-845 29-194 (290)
48 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-31 6.5E-36 290.0 12.7 157 676-845 58-220 (336)
49 4g31_A Eukaryotic translation 100.0 2.8E-31 9.6E-36 286.0 13.6 153 676-833 5-171 (299)
50 3hmm_A TGF-beta receptor type- 100.0 3.2E-31 1.1E-35 286.7 13.6 161 677-845 4-176 (303)
51 2z66_A Variable lymphocyte rec 100.0 3.5E-31 1.2E-35 287.1 13.5 259 96-389 11-277 (306)
52 3vq2_A TLR4, TOLL-like recepto 100.0 4.3E-30 1.5E-34 305.3 20.8 156 96-254 15-172 (606)
53 1xku_A Decorin; proteoglycan, 100.0 1.9E-29 6.5E-34 276.5 23.7 265 92-363 52-330 (330)
54 3o6n_A APL1; leucine-rich repe 100.0 1.3E-29 4.5E-34 284.4 22.5 271 113-396 42-334 (390)
55 3oja_B Anopheles plasmodium-re 100.0 1E-29 3.4E-34 301.5 22.1 270 114-396 49-340 (597)
56 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-29 5.2E-34 277.6 21.5 264 92-363 54-331 (332)
57 4g8a_A TOLL-like receptor 4; l 100.0 4.3E-29 1.5E-33 297.4 24.8 155 96-253 35-191 (635)
58 1ozn_A Reticulon 4 receptor; N 100.0 1E-29 3.6E-34 272.6 17.1 238 95-388 14-253 (285)
59 4ase_A Vascular endothelial gr 100.0 1.6E-30 5.4E-35 286.0 9.9 177 666-845 54-251 (353)
60 4fcg_A Uncharacterized protein 100.0 2.7E-28 9.1E-33 267.2 22.7 224 114-365 79-314 (328)
61 4fmz_A Internalin; leucine ric 100.0 5.6E-28 1.9E-32 266.5 24.9 259 93-369 67-328 (347)
62 1o6v_A Internalin A; bacterial 100.0 6.7E-28 2.3E-32 277.2 26.5 280 92-396 68-369 (466)
63 1wwl_A Monocyte differentiatio 100.0 4.6E-30 1.6E-34 279.3 7.7 245 113-366 40-310 (312)
64 3bz5_A Internalin-J, INLJ; leu 100.0 6.1E-28 2.1E-32 276.3 23.0 280 92-395 42-333 (457)
65 2z66_A Variable lymphocyte rec 100.0 3.8E-29 1.3E-33 271.0 11.9 255 91-369 27-291 (306)
66 4fmz_A Internalin; leucine ric 100.0 9E-28 3.1E-32 264.8 23.0 258 91-365 87-346 (347)
67 1o6v_A Internalin A; bacterial 100.0 1.5E-27 5.1E-32 274.2 25.4 280 92-395 46-346 (466)
68 1wwl_A Monocyte differentiatio 100.0 1.1E-29 3.9E-34 276.2 6.4 243 93-345 44-311 (312)
69 4b99_A Mitogen-activated prote 100.0 7E-29 2.4E-33 277.6 12.7 161 676-845 54-226 (398)
70 3zyj_A Leucine-rich repeat-con 100.0 5E-28 1.7E-32 276.1 19.5 228 92-344 64-293 (440)
71 4f9c_A Cell division cycle 7-r 100.0 2.1E-28 7.1E-33 270.7 14.8 146 674-832 19-170 (361)
72 3v5w_A G-protein coupled recep 100.0 2.2E-28 7.7E-33 285.3 14.8 159 676-845 189-354 (689)
73 2z62_A TOLL-like receptor 4, v 100.0 4E-28 1.4E-32 258.9 15.5 219 100-341 15-235 (276)
74 2z80_A TOLL-like receptor 2, v 100.0 2.9E-28 9.9E-33 269.7 13.5 256 92-347 52-318 (353)
75 3o53_A Protein LRIM1, AGAP0063 99.9 6.8E-29 2.3E-33 270.7 6.9 264 93-369 11-280 (317)
76 3uto_A Twitchin; kinase, muscl 99.9 7.6E-28 2.6E-32 282.1 15.4 161 676-845 157-320 (573)
77 3oja_A Leucine-rich immune mol 99.9 2.2E-28 7.5E-33 282.4 8.4 248 100-360 18-270 (487)
78 3zyi_A Leucine-rich repeat-con 99.9 5.1E-27 1.7E-31 268.7 19.5 231 91-346 74-306 (452)
79 3bz5_A Internalin-J, INLJ; leu 99.9 1E-26 3.6E-31 266.1 21.9 267 102-398 28-304 (457)
80 2o6q_A Variable lymphocyte rec 99.9 9.2E-27 3.1E-31 247.7 19.8 224 82-387 9-233 (270)
81 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-27 6E-32 255.2 13.4 236 91-350 31-268 (285)
82 1jl5_A Outer protein YOPM; leu 99.9 3.6E-27 1.2E-31 269.7 16.5 246 92-366 11-271 (454)
83 4aw2_A Serine/threonine-protei 99.9 1.8E-27 6.1E-32 270.2 11.7 172 667-845 65-240 (437)
84 1p9a_G Platelet glycoprotein I 99.9 1.5E-26 5.3E-31 248.6 16.6 216 112-388 6-223 (290)
85 1jl5_A Outer protein YOPM; leu 99.9 1E-25 3.5E-30 257.6 23.8 245 93-372 132-379 (454)
86 3uim_A Brassinosteroid insensi 99.9 1.3E-26 4.4E-31 253.3 13.9 181 663-844 17-198 (326)
87 3o53_A Protein LRIM1, AGAP0063 99.9 8.6E-28 2.9E-32 261.9 3.4 245 92-349 34-282 (317)
88 3v8s_A RHO-associated protein 99.9 1.1E-26 3.7E-31 261.7 11.9 169 668-845 61-233 (410)
89 2qkw_B Protein kinase; three-h 99.9 1.8E-26 6.3E-31 251.6 13.0 161 668-832 31-191 (321)
90 3fxz_A Serine/threonine-protei 99.9 7.8E-26 2.7E-30 244.0 17.7 152 675-835 19-171 (297)
91 2c30_A Serine/threonine-protei 99.9 8.8E-26 3E-30 246.5 18.1 163 662-833 21-194 (321)
92 3s95_A LIMK-1, LIM domain kina 99.9 6.5E-26 2.2E-30 245.9 16.7 151 676-833 10-161 (310)
93 2vd5_A DMPK protein; serine/th 99.9 1.4E-26 4.7E-31 261.0 11.3 172 667-845 52-227 (412)
94 3oja_A Leucine-rich immune mol 99.9 4.9E-27 1.7E-31 271.1 7.4 236 91-339 33-271 (487)
95 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4E-30 239.8 15.9 208 92-323 28-241 (276)
96 3g06_A SSPH2 (leucine-rich rep 99.9 7.3E-26 2.5E-30 267.1 14.3 260 93-397 41-301 (622)
97 3zgw_A Maternal embryonic leuc 99.9 8E-26 2.7E-30 249.2 13.3 162 675-844 9-172 (347)
98 1o6l_A RAC-beta serine/threoni 99.9 1.4E-25 4.8E-30 246.4 14.5 160 676-844 5-168 (337)
99 3fe3_A MAP/microtubule affinit 99.9 1E-25 3.5E-30 246.6 13.3 151 675-833 14-167 (328)
100 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.4E-25 5E-30 247.9 13.9 163 674-845 21-188 (353)
101 4eqm_A Protein kinase; transfe 99.9 1.7E-25 5.8E-30 241.0 13.9 162 675-844 10-175 (294)
102 2nru_A Interleukin-1 receptor- 99.9 8.1E-25 2.8E-29 236.7 17.7 166 662-833 11-186 (307)
103 3rfs_A Internalin B, repeat mo 99.9 2.7E-25 9.3E-30 236.6 13.7 203 161-372 39-242 (272)
104 3qd2_B Eukaryotic translation 99.9 4.1E-25 1.4E-29 241.3 15.4 154 675-833 5-217 (332)
105 3sxs_A Cytoplasmic tyrosine-pr 99.9 3.9E-25 1.3E-29 234.3 14.2 152 675-834 7-158 (268)
106 3kul_A Ephrin type-A receptor 99.9 3.1E-25 1E-29 242.6 13.7 152 676-834 49-205 (325)
107 4dc2_A Protein kinase C IOTA t 99.9 2.5E-25 8.6E-30 249.2 13.3 162 675-845 51-217 (396)
108 4hcu_A Tyrosine-protein kinase 99.9 1.6E-25 5.4E-30 237.6 10.7 149 676-832 10-158 (269)
109 1fot_A TPK1 delta, CAMP-depend 99.9 4.8E-25 1.6E-29 240.2 14.6 149 676-832 6-158 (318)
110 1tki_A Titin; serine kinase, m 99.9 9.9E-25 3.4E-29 238.1 17.1 152 675-834 4-158 (321)
111 4fr4_A YANK1, serine/threonine 99.9 3.7E-25 1.3E-29 247.0 13.8 159 676-844 15-177 (384)
112 1xjd_A Protein kinase C, theta 99.9 3.5E-25 1.2E-29 244.0 13.4 164 672-844 13-181 (345)
113 2yab_A Death-associated protei 99.9 8.1E-25 2.8E-29 242.6 16.3 151 675-833 11-172 (361)
114 1z7x_W Ribonuclease inhibitor; 99.9 4.5E-27 1.5E-31 269.5 -2.2 274 93-366 86-412 (461)
115 3a8x_A Protein kinase C IOTA t 99.9 4.8E-25 1.6E-29 243.0 14.0 160 676-844 9-173 (345)
116 3tki_A Serine/threonine-protei 99.9 4.2E-25 1.5E-29 241.3 13.4 150 675-832 6-157 (323)
117 2qol_A Ephrin receptor; recept 99.9 2.4E-25 8.3E-30 248.1 11.7 151 676-833 45-200 (373)
118 4glp_A Monocyte differentiatio 99.9 1.1E-24 3.7E-29 236.6 16.2 222 117-343 65-307 (310)
119 3e7e_A HBUB1, BUB1A, mitotic c 99.9 2.9E-25 9.8E-30 246.8 11.7 166 674-845 63-249 (365)
120 3rfs_A Internalin B, repeat mo 99.9 4.9E-25 1.7E-29 234.7 12.8 206 112-351 37-243 (272)
121 2i0e_A Protein kinase C-beta I 99.9 6.8E-25 2.3E-29 242.4 14.3 162 674-844 18-184 (353)
122 3p86_A Serine/threonine-protei 99.9 2E-25 6.9E-30 242.2 9.8 159 670-832 31-191 (309)
123 2zv2_A Calcium/calmodulin-depe 99.9 7.3E-25 2.5E-29 236.3 14.0 151 675-834 12-191 (298)
124 3niz_A Rhodanese family protei 99.9 8.3E-25 2.8E-29 237.6 14.4 151 675-833 20-172 (311)
125 1rdq_E PKA C-alpha, CAMP-depen 99.9 8.3E-25 2.8E-29 241.6 14.6 149 676-832 41-193 (350)
126 3a62_A Ribosomal protein S6 ki 99.9 5.8E-25 2E-29 240.6 13.0 150 675-832 16-173 (327)
127 3gen_A Tyrosine-protein kinase 99.9 3.8E-25 1.3E-29 236.4 11.3 150 675-832 23-172 (283)
128 3c0i_A Peripheral plasma membr 99.9 7.8E-25 2.7E-29 242.1 14.0 155 676-834 24-187 (351)
129 3soc_A Activin receptor type-2 99.9 6E-25 2E-29 239.9 12.5 152 675-834 23-185 (322)
130 2psq_A Fibroblast growth facto 99.9 7.1E-25 2.4E-29 244.1 13.2 155 675-832 80-255 (370)
131 2o6q_A Variable lymphocyte rec 99.9 8.1E-24 2.8E-28 225.0 20.4 157 92-248 37-194 (270)
132 1kob_A Twitchin; kinase, intra 99.9 1.8E-24 6.3E-29 241.9 16.1 153 675-834 50-205 (387)
133 2y0a_A Death-associated protei 99.9 2.1E-24 7E-29 236.1 16.0 150 676-833 11-171 (326)
134 3o0g_A Cell division protein k 99.9 1.9E-24 6.5E-29 232.3 15.3 150 676-833 2-154 (292)
135 2acx_A G protein-coupled recep 99.9 1.6E-24 5.6E-29 252.1 15.6 163 675-845 183-349 (576)
136 1ob3_A PFPK5, cell division co 99.9 1E-24 3.5E-29 234.0 12.8 149 676-832 2-152 (288)
137 2xwt_C Thyrotropin receptor; s 99.9 2.5E-24 8.4E-29 224.5 15.3 202 107-340 25-236 (239)
138 3ugc_A Tyrosine-protein kinase 99.9 4.4E-25 1.5E-29 237.5 9.8 152 675-833 9-167 (295)
139 3goz_A Leucine-rich repeat-con 99.9 5.8E-26 2E-30 252.2 2.2 259 97-355 3-309 (362)
140 2r5t_A Serine/threonine-protei 99.9 9.8E-25 3.3E-29 242.9 12.0 161 676-845 38-203 (373)
141 4euu_A Serine/threonine-protei 99.9 2.7E-24 9.1E-29 234.3 15.2 154 676-834 9-170 (319)
142 3cbl_A C-FES, proto-oncogene t 99.9 7E-25 2.4E-29 244.9 10.6 151 675-832 113-265 (377)
143 2bdw_A Hypothetical protein K1 99.9 2E-24 7E-29 239.7 14.3 152 674-833 27-184 (362)
144 3h4j_B AMPK kdaid, SNF1-like p 99.9 1.6E-24 5.6E-29 237.7 13.3 149 676-833 9-161 (336)
145 3f3z_A Calcium/calmodulin-depe 99.9 3.7E-24 1.3E-28 227.9 15.5 151 675-833 8-162 (277)
146 2pmi_A Negative RE, cyclin-dep 99.9 3.2E-24 1.1E-28 233.6 15.3 154 675-832 4-160 (317)
147 3c4z_A Rhodopsin kinase; Ser/T 99.9 2.9E-24 9.8E-29 249.3 15.4 165 676-845 185-353 (543)
148 4ejn_A RAC-alpha serine/threon 99.9 8E-25 2.7E-29 250.0 10.6 161 675-844 147-312 (446)
149 2x4f_A Myosin light chain kina 99.9 2.4E-24 8.2E-29 240.1 14.1 146 681-833 94-242 (373)
150 1opk_A P150, C-ABL, proto-onco 99.9 9.6E-25 3.3E-29 252.5 11.2 152 675-833 219-371 (495)
151 1qcf_A Haematopoetic cell kina 99.9 7.6E-25 2.6E-29 250.8 10.3 153 672-832 184-336 (454)
152 3soa_A Calcium/calmodulin-depe 99.9 2.1E-24 7.3E-29 245.6 13.8 162 674-844 9-176 (444)
153 1vzo_A Ribosomal protein S6 ki 99.9 9.1E-25 3.1E-29 241.9 10.2 161 676-844 54-223 (355)
154 3q4u_A Activin receptor type-1 99.9 4.1E-24 1.4E-28 230.2 14.9 148 675-835 7-168 (301)
155 2vuw_A Serine/threonine-protei 99.9 1.4E-25 4.7E-30 246.4 3.3 148 675-832 19-234 (336)
156 2y94_A 5'-AMP-activated protei 99.9 3.1E-24 1.1E-28 246.0 14.6 150 676-833 16-169 (476)
157 1qpc_A LCK kinase; alpha beta 99.9 3.1E-24 1.1E-28 228.8 13.4 151 675-833 12-162 (279)
158 3p1a_A MYT1 kinase, membrane-a 99.9 2.3E-24 8E-29 234.0 12.4 150 676-833 57-210 (311)
159 1luf_A Muscle-specific tyrosin 99.9 1.4E-24 4.8E-29 238.7 10.5 157 673-832 44-226 (343)
160 3uc3_A Serine/threonine-protei 99.9 2.9E-24 1E-28 238.4 13.1 148 675-831 19-169 (361)
161 3ork_A Serine/threonine protei 99.9 1.4E-24 4.6E-29 235.8 10.0 151 675-833 11-169 (311)
162 3kfa_A Tyrosine-protein kinase 99.9 6.1E-25 2.1E-29 235.3 7.1 154 674-834 11-165 (288)
163 4e5w_A Tyrosine-protein kinase 99.9 4.5E-24 1.5E-28 230.2 13.8 152 676-834 21-180 (302)
164 2ast_B S-phase kinase-associat 99.9 8.5E-25 2.9E-29 239.8 8.1 252 93-373 48-314 (336)
165 3vhe_A Vascular endothelial gr 99.9 9.4E-25 3.2E-29 241.7 8.5 165 666-833 12-246 (359)
166 3t9t_A Tyrosine-protein kinase 99.9 1.5E-24 5.2E-29 229.4 9.6 148 676-831 8-155 (267)
167 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.5E-24 5.2E-29 248.0 10.0 151 674-832 182-332 (452)
168 3cok_A Serine/threonine-protei 99.9 7.2E-24 2.5E-28 225.9 14.6 150 676-832 11-164 (278)
169 3gni_B Strad alpha; kinase fol 99.9 6.2E-24 2.1E-28 238.1 14.6 151 675-831 24-179 (389)
170 4agu_A Cyclin-dependent kinase 99.9 7.9E-24 2.7E-28 229.4 14.9 150 676-833 3-155 (311)
171 1z7x_W Ribonuclease inhibitor; 99.9 5E-26 1.7E-30 260.8 -2.6 274 93-366 29-355 (461)
172 2izr_A Casein kinase I isoform 99.9 3.6E-24 1.2E-28 234.5 12.2 150 675-834 8-164 (330)
173 1mp8_A Focal adhesion kinase 1 99.9 2.4E-24 8.2E-29 230.1 10.5 151 675-833 14-169 (281)
174 2w4o_A Calcium/calmodulin-depe 99.9 4.1E-24 1.4E-28 236.1 12.6 148 675-832 52-203 (349)
175 4fvq_A Tyrosine-protein kinase 99.9 3.4E-24 1.2E-28 229.6 11.6 150 675-831 7-172 (289)
176 2ivs_A Proto-oncogene tyrosine 99.9 4E-24 1.4E-28 231.9 12.2 157 675-834 22-204 (314)
177 3rp9_A Mitogen-activated prote 99.9 3.5E-24 1.2E-28 245.6 12.3 148 676-832 53-208 (458)
178 3tt0_A Basic fibroblast growth 99.9 3.2E-24 1.1E-28 240.0 11.7 155 675-832 68-243 (382)
179 3qup_A Tyrosine-protein kinase 99.9 1.5E-24 5.2E-29 236.5 8.9 158 672-832 19-189 (323)
180 3m19_A Variable lymphocyte rec 99.9 3.3E-23 1.1E-27 217.7 18.7 180 140-345 15-194 (251)
181 3is5_A Calcium-dependent prote 99.9 5.2E-24 1.8E-28 228.2 12.6 154 676-833 22-180 (285)
182 3dtc_A Mitogen-activated prote 99.9 5.5E-24 1.9E-28 225.8 12.6 151 676-833 7-169 (271)
183 3hko_A Calcium/calmodulin-depe 99.9 3.9E-24 1.3E-28 235.4 11.9 159 671-832 21-222 (345)
184 3n9x_A Phosphotransferase; mal 99.9 5.7E-24 2E-28 241.9 13.6 150 675-833 25-182 (432)
185 2rku_A Serine/threonine-protei 99.9 1.2E-23 4.1E-28 226.1 15.4 150 675-832 14-167 (294)
186 4glp_A Monocyte differentiatio 99.9 4.9E-24 1.7E-28 231.4 12.4 228 135-366 60-308 (310)
187 2ac3_A MAP kinase-interacting 99.9 1.4E-23 4.8E-28 228.0 15.9 148 676-831 12-165 (316)
188 2eue_A Carbon catabolite derep 99.9 1.1E-23 3.8E-28 224.1 14.8 149 676-833 13-165 (275)
189 1k9a_A Carboxyl-terminal SRC k 99.9 8.2E-24 2.8E-28 241.9 14.6 148 675-831 192-340 (450)
190 3lxl_A Tyrosine-protein kinase 99.9 7.4E-24 2.5E-28 231.6 13.6 152 676-834 23-181 (327)
191 2owb_A Serine/threonine-protei 99.9 1.1E-23 3.8E-28 231.1 15.1 150 676-833 41-194 (335)
192 2xwt_C Thyrotropin receptor; s 99.9 1.4E-23 4.9E-28 218.7 15.0 179 92-273 31-219 (239)
193 3dls_A PAS domain-containing s 99.9 4.2E-24 1.4E-28 234.6 11.5 152 675-834 23-184 (335)
194 3kn6_A Ribosomal protein S6 ki 99.9 2E-23 6.8E-28 228.2 16.6 142 681-833 16-162 (325)
195 4eut_A Serine/threonine-protei 99.9 8.3E-24 2.8E-28 237.8 13.9 153 676-833 9-169 (396)
196 1x8b_A WEE1HU, WEE1-like prote 99.9 1.2E-23 3.9E-28 224.8 14.3 155 675-833 10-187 (289)
197 3pfq_A PKC-B, PKC-beta, protei 99.9 9.5E-24 3.2E-28 252.6 15.0 163 674-845 339-506 (674)
198 3oz6_A Mitogen-activated prote 99.9 8.8E-24 3E-28 236.8 13.7 150 673-832 6-161 (388)
199 2h34_A Serine/threonine-protei 99.9 1.1E-23 3.9E-28 228.3 14.1 151 675-833 33-187 (309)
200 2a2a_A Death-associated protei 99.9 1.3E-23 4.3E-28 229.2 14.5 151 675-833 11-172 (321)
201 3lb7_A RAF proto-oncogene seri 99.9 9.9E-24 3.4E-28 228.7 13.4 147 675-831 35-183 (307)
202 3llt_A Serine/threonine kinase 99.9 7.6E-24 2.6E-28 234.7 12.6 162 663-832 22-214 (360)
203 1p9a_G Platelet glycoprotein I 99.9 3E-23 1E-27 223.0 16.9 199 92-320 10-209 (290)
204 3mdy_A Bone morphogenetic prot 99.9 1.9E-23 6.6E-28 228.8 15.5 154 671-834 32-196 (337)
205 3fdn_A Serine/threonine-protei 99.9 1.1E-23 3.6E-28 224.8 13.0 149 675-831 8-160 (279)
206 3lxp_A Non-receptor tyrosine-p 99.9 2.5E-23 8.5E-28 226.6 16.2 148 678-834 33-188 (318)
207 2clq_A Mitogen-activated prote 99.9 2.9E-23 9.8E-28 223.0 16.3 151 677-832 23-175 (295)
208 3kex_A Receptor tyrosine-prote 99.9 5.3E-24 1.8E-28 232.7 10.6 151 676-834 13-169 (325)
209 3kk8_A Calcium/calmodulin depe 99.9 2.1E-23 7.1E-28 222.9 14.9 151 675-833 5-161 (284)
210 1rjb_A FL cytokine receptor; k 99.9 1.1E-23 3.6E-28 231.9 12.9 158 674-834 43-226 (344)
211 1ua2_A CAK, cell division prot 99.9 8.6E-24 3E-28 233.1 12.1 154 672-833 6-165 (346)
212 3goz_A Leucine-rich repeat-con 99.9 6E-25 2.1E-29 244.0 2.8 248 120-367 2-299 (362)
213 2yex_A Serine/threonine-protei 99.9 1.6E-23 5.4E-28 222.7 13.7 150 675-832 6-157 (276)
214 2ca6_A RAN GTPase-activating p 99.9 4.7E-25 1.6E-29 247.0 1.8 240 107-346 23-319 (386)
215 3m19_A Variable lymphocyte rec 99.9 1.5E-23 5.3E-28 220.3 13.3 185 82-274 9-194 (251)
216 3lm5_A Serine/threonine-protei 99.9 1.5E-23 5.1E-28 229.4 13.6 170 658-833 10-187 (327)
217 3i6u_A CDS1, serine/threonine- 99.9 9.9E-24 3.4E-28 238.9 12.5 151 673-832 132-294 (419)
218 2h8h_A Proto-oncogene tyrosine 99.9 2.3E-24 7.8E-29 251.7 7.4 151 674-832 265-415 (535)
219 2y7j_A Phosphorylase B kinase 99.9 2.1E-23 7.2E-28 231.8 14.8 158 668-833 86-253 (365)
220 3pg1_A Mitogen-activated prote 99.9 1.2E-23 4E-28 233.4 12.6 158 667-832 13-186 (362)
221 1u5q_A Serine/threonine protei 99.9 1E-23 3.5E-28 232.7 12.0 149 676-832 54-206 (348)
222 3l9p_A Anaplastic lymphoma kin 99.9 3.7E-24 1.3E-28 238.1 8.6 153 675-830 70-234 (367)
223 3poz_A Epidermal growth factor 99.9 8.1E-24 2.8E-28 231.4 11.1 151 676-834 15-171 (327)
224 2pvf_A Fibroblast growth facto 99.9 1.6E-23 5.5E-28 229.7 13.4 156 675-833 34-210 (334)
225 3dbq_A Dual specificity protei 99.9 9.6E-24 3.3E-28 232.5 11.6 161 675-845 8-173 (343)
226 1nxk_A MAP kinase-activated pr 99.9 1.8E-23 6.1E-28 235.3 14.0 146 676-832 61-216 (400)
227 3g06_A SSPH2 (leucine-rich rep 99.9 9.6E-23 3.3E-27 240.5 20.8 239 92-370 61-302 (622)
228 1t46_A HOMO sapiens V-KIT hard 99.9 8.7E-24 3E-28 229.1 10.9 157 675-834 22-199 (313)
229 2w1i_A JAK2; chromosomal rearr 99.9 1.7E-23 5.8E-28 228.7 13.3 152 676-834 41-199 (326)
230 3bhy_A Death-associated protei 99.9 2.9E-23 9.9E-28 221.7 14.7 149 676-832 5-164 (283)
231 3lij_A Calcium/calmodulin depe 99.9 2.2E-23 7.7E-28 241.2 14.9 151 675-833 36-192 (494)
232 3a7i_A MST3 kinase, serine/thr 99.9 3.8E-23 1.3E-27 223.3 15.7 149 676-833 22-172 (303)
233 3g33_A Cell division protein k 99.9 2.4E-23 8.3E-28 225.4 14.2 152 674-832 7-172 (308)
234 3gxj_A TGF-beta receptor type- 99.9 2.9E-24 9.8E-29 231.6 6.8 148 675-835 2-163 (303)
235 3q5i_A Protein kinase; CDPK, m 99.9 3.3E-23 1.1E-27 240.4 16.2 151 675-833 35-202 (504)
236 2pml_X PFPK7, Ser/Thr protein 99.9 1.4E-23 4.8E-28 231.2 12.3 151 675-832 30-204 (348)
237 1u59_A Tyrosine-protein kinase 99.9 3E-23 1E-27 222.3 14.5 151 676-834 9-164 (287)
238 2qr7_A Ribosomal protein S6 ki 99.9 2.8E-23 9.5E-28 228.7 14.4 148 675-834 21-174 (342)
239 2buj_A Serine/threonine-protei 99.9 1.5E-23 5E-28 227.9 11.9 153 675-831 28-185 (317)
240 3op5_A Serine/threonine-protei 99.9 1.2E-23 4.1E-28 233.7 11.5 151 675-833 34-207 (364)
241 1h6u_A Internalin H; cell adhe 99.9 3.6E-23 1.2E-27 224.4 14.9 193 113-344 38-231 (308)
242 1zy4_A Serine/threonine-protei 99.9 2E-23 6.9E-28 224.7 12.8 150 675-832 5-168 (303)
243 2a19_B Interferon-induced, dou 99.9 1.6E-23 5.4E-28 223.6 11.7 150 674-833 9-175 (284)
244 3mtl_A Cell division protein k 99.9 7.7E-24 2.6E-28 231.3 9.4 149 676-832 2-152 (324)
245 2ozo_A Tyrosine-protein kinase 99.9 1.4E-23 4.9E-28 248.6 12.4 144 683-834 343-490 (613)
246 2h6d_A 5'-AMP-activated protei 99.9 2.8E-23 9.7E-28 220.9 13.4 150 675-832 10-163 (276)
247 3mi9_A Cell division protein k 99.9 3.7E-23 1.3E-27 228.3 14.8 148 676-831 17-175 (351)
248 1p4o_A Insulin-like growth fac 99.9 3.4E-24 1.2E-28 233.5 6.4 162 668-832 17-190 (322)
249 3ttj_A Mitogen-activated prote 99.9 1.3E-23 4.4E-28 240.9 11.3 157 675-844 61-226 (464)
250 1csn_A Casein kinase-1; phosph 99.9 3.9E-23 1.3E-27 222.3 14.3 149 675-833 9-164 (298)
251 3og7_A AKAP9-BRAF fusion prote 99.9 1.6E-23 5.5E-28 224.7 11.2 148 675-832 23-172 (289)
252 1phk_A Phosphorylase kinase; g 99.9 4.4E-23 1.5E-27 222.0 14.7 152 674-833 15-177 (298)
253 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.5E-23 5.3E-28 229.4 11.2 149 675-832 33-189 (329)
254 4aaa_A Cyclin-dependent kinase 99.9 2.3E-23 7.8E-28 228.2 12.5 149 676-832 25-176 (331)
255 1mqb_A Ephrin type-A receptor 99.9 1.7E-23 5.7E-28 229.6 11.3 151 676-833 44-200 (333)
256 3f66_A Hepatocyte growth facto 99.9 1.8E-23 6.3E-28 225.0 11.3 150 676-832 25-180 (298)
257 3eqc_A Dual specificity mitoge 99.9 1.6E-23 5.5E-28 232.1 10.9 149 675-831 32-183 (360)
258 2j7t_A Serine/threonine-protei 99.9 1.9E-23 6.5E-28 225.3 11.1 149 675-830 18-167 (302)
259 3nyv_A Calmodulin-domain prote 99.9 2E-23 6.7E-28 241.1 11.8 151 675-833 25-182 (484)
260 3mwu_A Calmodulin-domain prote 99.9 2.6E-23 8.9E-28 240.2 12.8 151 675-833 21-177 (486)
261 3com_A Serine/threonine-protei 99.9 5.8E-23 2E-27 222.9 14.7 151 674-833 27-178 (314)
262 1cm8_A Phosphorylated MAP kina 99.9 2E-23 6.7E-28 232.2 11.2 148 675-832 24-180 (367)
263 1xbb_A Tyrosine-protein kinase 99.9 4.5E-23 1.5E-27 221.4 13.6 152 675-835 15-172 (291)
264 1b6c_B TGF-B superfamily recep 99.9 7.2E-23 2.5E-27 224.8 15.5 154 668-834 34-201 (342)
265 2wqm_A Serine/threonine-protei 99.9 4E-23 1.4E-27 223.8 13.3 153 676-832 32-188 (310)
266 3kmu_A ILK, integrin-linked ki 99.9 2.7E-23 9.3E-28 220.0 11.7 151 676-831 10-164 (271)
267 2vgo_A Serine/threonine-protei 99.9 5.3E-23 1.8E-27 220.0 14.0 149 676-832 14-166 (284)
268 2zmd_A Dual specificity protei 99.9 2.2E-23 7.7E-28 233.7 11.6 148 676-833 56-207 (390)
269 2xir_A Vascular endothelial gr 99.9 1.2E-23 4.2E-28 228.2 9.2 166 666-834 17-202 (316)
270 2x7f_A TRAF2 and NCK-interacti 99.9 1.6E-23 5.5E-28 228.6 10.0 157 669-832 17-181 (326)
271 4f0f_A Serine/threonine-protei 99.9 6.4E-23 2.2E-27 219.5 14.3 151 675-832 18-181 (287)
272 3cc6_A Protein tyrosine kinase 99.9 1.8E-23 6.1E-28 223.2 9.9 151 675-833 11-166 (281)
273 2wtk_C Serine/threonine-protei 99.9 9E-23 3.1E-27 220.3 15.5 151 675-832 4-161 (305)
274 4azs_A Methyltransferase WBDD; 99.9 1.2E-23 4E-28 246.6 9.1 149 684-844 242-402 (569)
275 3c1x_A Hepatocyte growth facto 99.9 1.5E-23 5.3E-28 233.5 9.6 149 677-832 90-244 (373)
276 2ca6_A RAN GTPase-activating p 99.9 1.9E-24 6.6E-29 242.0 2.2 237 132-368 24-319 (386)
277 3g2f_A Bone morphogenetic prot 99.9 4.9E-23 1.7E-27 225.7 13.3 148 675-832 12-172 (336)
278 2r3i_A Cell division protein k 99.9 5.2E-23 1.8E-27 221.5 13.1 150 676-832 3-155 (299)
279 1fvr_A Tyrosine-protein kinase 99.9 5.3E-23 1.8E-27 224.8 13.3 152 676-830 25-192 (327)
280 1t4h_A Serine/threonine-protei 99.9 8.2E-23 2.8E-27 219.2 14.5 150 677-832 27-184 (290)
281 2ycf_A Serine/threonine-protei 99.9 4E-23 1.4E-27 225.3 12.3 149 675-832 9-169 (322)
282 3uqc_A Probable conserved tran 99.9 7.5E-23 2.6E-27 219.4 14.2 143 676-828 31-177 (286)
283 3brb_A Proto-oncogene tyrosine 99.9 1.5E-23 5.1E-28 227.5 8.8 160 670-832 28-199 (313)
284 3eb0_A Putative uncharacterize 99.9 5.1E-23 1.7E-27 230.3 13.1 154 672-834 3-196 (383)
285 2jam_A Calcium/calmodulin-depe 99.9 4.3E-23 1.5E-27 223.0 11.9 149 675-831 8-160 (304)
286 3nsz_A CK II alpha, casein kin 99.9 9.5E-23 3.3E-27 222.8 14.8 144 676-833 36-184 (330)
287 2vwi_A Serine/threonine-protei 99.9 2E-23 6.9E-28 225.0 9.2 157 673-832 12-173 (303)
288 3byv_A Rhoptry kinase; malaria 99.9 6.3E-24 2.2E-28 237.1 5.1 153 675-831 72-257 (377)
289 2v62_A Serine/threonine-protei 99.9 3.5E-23 1.2E-27 228.2 10.7 148 676-832 37-205 (345)
290 3pls_A Macrophage-stimulating 99.9 4.5E-23 1.5E-27 221.8 10.9 149 677-832 22-176 (298)
291 4fl3_A Tyrosine-protein kinase 99.9 4.8E-23 1.6E-27 244.8 12.2 144 682-834 375-523 (635)
292 3qyz_A Mitogen-activated prote 99.9 7.4E-23 2.5E-27 227.3 12.9 149 675-833 26-181 (364)
293 2i1m_A Macrophage colony-stimu 99.9 2.4E-23 8.3E-28 227.9 8.8 159 672-833 42-217 (333)
294 3fme_A Dual specificity mitoge 99.9 4.2E-23 1.4E-27 221.1 10.4 154 675-833 6-163 (290)
295 3lzb_A Epidermal growth factor 99.9 5.4E-23 1.8E-27 225.0 11.4 150 675-832 14-169 (327)
296 2i6l_A Mitogen-activated prote 99.9 7.2E-23 2.5E-27 222.3 12.1 148 675-832 10-173 (320)
297 2eva_A TAK1 kinase - TAB1 chim 99.9 4.6E-23 1.6E-27 223.4 10.5 150 676-832 8-158 (307)
298 3an0_A Dual specificity mitoge 99.9 4.9E-23 1.7E-27 226.3 10.3 153 675-832 50-206 (340)
299 2w5a_A Serine/threonine-protei 99.9 4.8E-23 1.7E-27 219.4 9.9 158 675-833 5-169 (279)
300 3m2w_A MAP kinase-activated pr 99.9 1.7E-22 5.9E-27 217.9 14.3 146 676-832 17-172 (299)
301 1byg_A CSK, protein (C-termina 99.9 4.3E-23 1.5E-27 220.0 9.1 149 675-832 20-169 (278)
302 2xrw_A Mitogen-activated prote 99.9 1.2E-22 4E-27 226.3 12.9 147 675-832 24-179 (371)
303 2fst_X Mitogen-activated prote 99.9 4.8E-23 1.6E-27 229.0 9.4 148 675-832 28-184 (367)
304 3ll6_A Cyclin G-associated kin 99.9 6.1E-23 2.1E-27 224.6 9.6 154 675-832 27-190 (337)
305 2pzi_A Probable serine/threoni 99.9 1E-22 3.5E-27 244.9 12.4 148 675-833 79-234 (681)
306 2jii_A Serine/threonine-protei 99.9 3.3E-23 1.1E-27 229.0 7.4 146 676-833 42-214 (352)
307 2b9h_A MAP kinase FUS3, mitoge 99.9 1.6E-22 5.5E-27 223.2 12.7 148 675-832 10-164 (353)
308 1h6u_A Internalin H; cell adhe 99.9 7.8E-22 2.7E-26 213.9 17.9 191 140-367 42-232 (308)
309 4e7w_A Glycogen synthase kinas 99.9 1.2E-22 4E-27 228.2 11.4 149 676-833 40-195 (394)
310 1u46_A ACK-1, activated CDC42 99.9 9.9E-23 3.4E-27 218.3 10.1 151 676-834 18-175 (291)
311 4ay9_X Follicle-stimulating ho 99.9 4.1E-22 1.4E-26 220.1 15.2 237 96-362 13-256 (350)
312 3rgf_A Cyclin-dependent kinase 99.9 2.4E-22 8.1E-27 226.6 13.4 149 678-832 22-184 (405)
313 2j0j_A Focal adhesion kinase 1 99.9 1.2E-22 4E-27 242.4 11.4 154 673-834 387-545 (656)
314 4ay9_X Follicle-stimulating ho 99.9 3.3E-22 1.1E-26 220.8 14.2 225 119-369 12-240 (350)
315 3cvr_A Invasion plasmid antige 99.9 2.9E-22 9.9E-27 233.7 14.1 221 117-382 60-289 (571)
316 1blx_A Cyclin-dependent kinase 99.9 1.8E-22 6.2E-27 220.1 11.7 152 674-832 9-172 (326)
317 4hgt_A Casein kinase I isoform 99.9 3.6E-22 1.2E-26 214.4 13.8 150 674-833 7-161 (296)
318 2yfx_A Tyrosine-protein kinase 99.9 9.7E-23 3.3E-27 222.7 9.3 154 675-831 29-194 (327)
319 2wei_A Calmodulin-domain prote 99.9 4.4E-22 1.5E-26 213.2 14.1 152 674-833 20-177 (287)
320 3aln_A Dual specificity mitoge 99.9 2.3E-22 7.8E-27 219.7 12.1 153 676-832 22-178 (327)
321 3kvw_A DYRK2, dual specificity 99.9 3.8E-22 1.3E-26 226.5 14.3 150 675-832 96-254 (429)
322 1j1b_A Glycogen synthase kinas 99.9 1.9E-22 6.6E-27 228.4 11.8 149 676-833 54-210 (420)
323 3uzp_A CKI-delta, CKID, casein 99.9 5.8E-22 2E-26 212.9 14.7 150 675-834 8-162 (296)
324 2iwi_A Serine/threonine-protei 99.9 1.4E-22 4.6E-27 219.9 8.8 154 672-833 27-193 (312)
325 3sv0_A Casein kinase I-like; t 99.9 1E-21 3.5E-26 225.5 16.6 150 675-834 6-160 (483)
326 3q60_A ROP5B; pseudokinase, tr 99.9 2.3E-22 8E-27 223.8 10.2 148 676-832 62-246 (371)
327 1wak_A Serine/threonine-protei 99.9 3.2E-22 1.1E-26 224.2 11.3 135 675-817 36-184 (397)
328 4exu_A Mitogen-activated prote 99.9 2.8E-22 9.6E-27 223.2 10.7 147 675-832 41-196 (371)
329 3cek_A Dual specificity protei 99.9 9.1E-23 3.1E-27 221.4 6.5 158 666-833 18-179 (313)
330 3e3p_A Protein kinase, putativ 99.9 3.7E-22 1.3E-26 220.9 11.4 160 669-834 16-186 (360)
331 1z57_A Dual specificity protei 99.9 7.9E-22 2.7E-26 215.8 13.3 150 675-832 13-189 (339)
332 2y4i_B KSR2, HKSR2, kinase sup 99.9 2.1E-22 7.2E-27 218.9 8.1 150 672-831 29-180 (319)
333 3coi_A Mitogen-activated prote 99.9 4E-22 1.4E-26 220.3 10.1 146 676-832 24-178 (353)
334 3a99_A Proto-oncogene serine/t 99.9 3.7E-22 1.3E-26 217.5 9.5 153 672-832 39-202 (320)
335 2ast_B S-phase kinase-associat 99.9 5.9E-23 2E-27 225.0 2.8 233 92-351 70-314 (336)
336 2o6s_A Variable lymphocyte rec 99.9 3.2E-21 1.1E-25 196.4 14.3 150 96-248 11-161 (208)
337 2rio_A Serine/threonine-protei 99.9 8.4E-22 2.9E-26 224.1 10.6 150 678-834 17-182 (434)
338 3fhr_A MAP kinase-activated pr 99.9 2.6E-21 9E-26 212.3 14.1 148 675-832 27-183 (336)
339 3cvr_A Invasion plasmid antige 99.8 3.6E-21 1.2E-25 224.4 15.9 202 82-331 52-255 (571)
340 2o6s_A Variable lymphocyte rec 99.8 2.9E-21 1E-25 196.7 13.2 95 164-258 29-123 (208)
341 3p23_A Serine/threonine-protei 99.8 1E-21 3.5E-26 223.0 10.8 147 676-833 24-176 (432)
342 2vx3_A Dual specificity tyrosi 99.8 1.2E-21 4.3E-26 218.9 11.2 160 667-832 45-213 (382)
343 2dyl_A Dual specificity mitoge 99.8 1.4E-21 4.7E-26 212.2 10.7 150 675-832 24-177 (318)
344 2v9t_B SLIT homolog 2 protein 99.8 3.2E-21 1.1E-25 198.4 12.8 167 166-388 14-180 (220)
345 2eu9_A Dual specificity protei 99.8 2.5E-21 8.6E-26 213.3 12.8 150 675-832 18-194 (355)
346 3en9_A Glycoprotease, O-sialog 99.8 1.5E-21 5.1E-26 227.4 10.7 136 679-833 339-482 (540)
347 2v70_A SLIT-2, SLIT homolog 2 99.8 4.3E-21 1.5E-25 197.4 12.6 167 166-388 14-181 (220)
348 3qa8_A MGC80376 protein; kinas 99.8 6.8E-22 2.3E-26 232.4 7.1 153 676-833 14-177 (676)
349 1q8y_A SR protein kinase; tran 99.8 1.8E-21 6.3E-26 216.3 9.9 150 675-832 18-190 (373)
350 2xot_A Amphoterin-induced prot 99.8 2.4E-21 8.3E-26 214.8 10.7 173 119-340 21-199 (361)
351 1zar_A RIO2 kinase; serine kin 99.8 4.9E-21 1.7E-25 204.6 12.2 146 668-833 82-245 (282)
352 4b8c_D Glucose-repressible alc 99.8 4.9E-22 1.7E-26 239.8 1.3 266 36-343 129-404 (727)
353 2v9t_B SLIT homolog 2 protein 99.8 5.7E-20 1.9E-24 189.0 12.8 151 96-249 15-166 (220)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-20 1.7E-24 189.4 12.4 154 96-252 15-170 (220)
355 2xot_A Amphoterin-induced prot 99.8 4E-20 1.4E-24 205.1 12.1 173 96-271 22-201 (361)
356 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.5E-24 187.5 14.1 151 166-343 22-172 (229)
357 1h6t_A Internalin B; cell adhe 99.8 2.9E-19 9.8E-24 192.0 16.4 170 161-344 44-214 (291)
358 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.6E-24 213.4 14.2 187 96-321 25-212 (605)
359 3e6j_A Variable lymphocyte rec 99.8 3.1E-19 1.1E-23 184.7 15.3 152 97-252 24-176 (229)
360 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.3E-24 212.2 14.8 188 142-345 24-212 (605)
361 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.8E-24 195.2 11.8 172 113-321 43-215 (291)
362 3ogk_B Coronatine-insensitive 99.8 1.5E-20 5.1E-25 222.3 4.7 274 93-367 165-528 (592)
363 4ezg_A Putative uncharacterize 99.8 2.2E-18 7.5E-23 173.9 15.4 157 158-344 39-195 (197)
364 3dzo_A Rhoptry kinase domain; 99.8 2.9E-19 1E-23 201.7 9.8 153 676-832 78-263 (413)
365 1dce_A Protein (RAB geranylger 99.8 4.6E-21 1.6E-25 224.5 -5.8 201 113-359 346-567 (567)
366 1zth_A RIO1 serine protein kin 99.8 4.6E-19 1.6E-23 186.9 8.8 139 678-833 49-222 (258)
367 3ogk_B Coronatine-insensitive 99.8 2.7E-20 9.1E-25 220.1 -1.6 273 93-366 139-477 (592)
368 4ezg_A Putative uncharacterize 99.7 4E-18 1.4E-22 171.9 12.3 150 113-270 41-192 (197)
369 1xeu_A Internalin C; cellular 99.7 2E-18 6.7E-23 182.6 10.3 168 140-345 20-187 (263)
370 1dce_A Protein (RAB geranylger 99.7 7.2E-20 2.5E-24 214.4 -2.1 188 160-370 346-551 (567)
371 1xeu_A Internalin C; cellular 99.7 2.7E-18 9.3E-23 181.5 8.7 171 114-322 17-188 (263)
372 4b8c_D Glucose-repressible alc 99.7 1.5E-18 5.1E-23 209.4 5.5 202 94-320 193-405 (727)
373 2wfh_A SLIT homolog 2 protein 99.7 1.5E-17 5E-22 167.3 10.7 69 290-388 86-154 (193)
374 1w8a_A SLIT protein; signaling 99.7 3E-17 1E-21 164.8 12.2 132 95-252 11-143 (192)
375 1w8a_A SLIT protein; signaling 99.7 1.3E-17 4.6E-22 167.4 8.7 130 142-274 11-141 (192)
376 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 156.9 12.6 131 141-273 26-161 (168)
377 2p1m_B Transport inhibitor res 99.7 6.1E-18 2.1E-22 199.8 4.4 296 92-392 130-518 (594)
378 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.6E-21 156.2 12.0 133 115-249 23-161 (168)
379 2p1m_B Transport inhibitor res 99.7 6.4E-18 2.2E-22 199.7 2.8 295 92-393 105-494 (594)
380 2je0_A Acidic leucine-rich nuc 99.7 9.4E-17 3.2E-21 154.0 8.7 127 140-268 18-149 (149)
381 2je0_A Acidic leucine-rich nuc 99.6 1.4E-16 4.9E-21 152.7 7.4 127 116-244 17-149 (149)
382 2o6r_A Variable lymphocyte rec 99.6 9.2E-16 3.1E-20 151.7 12.8 132 95-252 10-141 (177)
383 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.8E-20 153.5 12.8 128 119-249 13-140 (193)
384 2o6r_A Variable lymphocyte rec 99.6 7.9E-16 2.7E-20 152.1 10.7 113 92-227 28-140 (177)
385 3sb4_A Hypothetical leucine ri 99.6 4.9E-16 1.7E-20 169.7 9.2 243 92-343 25-310 (329)
386 4gyi_A RIO2 kinase; protein ki 99.6 7.9E-16 2.7E-20 169.0 10.0 147 669-831 88-266 (397)
387 3sb4_A Hypothetical leucine ri 99.6 5.9E-16 2E-20 169.1 7.6 249 115-373 24-318 (329)
388 1ds9_A Outer arm dynein; leuci 99.6 3.4E-17 1.2E-21 165.2 -3.1 149 112-265 14-180 (198)
389 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 165.7 -3.9 155 159-343 14-185 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.6 1.9E-15 6.5E-20 149.3 7.5 133 111-248 14-153 (176)
391 4fdw_A Leucine rich hypothetic 99.6 2.9E-14 9.9E-19 159.7 17.8 223 110-343 130-358 (401)
392 1a9n_A U2A', U2A'; complex (nu 99.5 8.6E-15 2.9E-19 144.6 9.5 131 136-272 15-153 (176)
393 4fdw_A Leucine rich hypothetic 99.5 7.8E-14 2.7E-18 156.2 17.4 241 92-343 135-383 (401)
394 3g39_A Variable lymphocyte rec 99.5 2.1E-14 7.1E-19 141.1 8.4 50 291-340 63-112 (170)
395 3g39_A Variable lymphocyte rec 99.5 9.9E-14 3.4E-18 136.2 10.9 87 163-249 30-116 (170)
396 2r9u_A Variable lymphocyte rec 99.5 2E-13 6.9E-18 134.6 11.0 86 163-248 33-118 (174)
397 2r9u_A Variable lymphocyte rec 99.4 3.9E-13 1.3E-17 132.5 10.7 105 165-272 14-118 (174)
398 2ifg_A High affinity nerve gro 99.4 5.7E-13 2E-17 146.3 10.1 70 291-391 65-134 (347)
399 3un9_A NLR family member X1; l 99.4 3.2E-14 1.1E-18 157.7 -2.7 156 116-271 72-251 (372)
400 3un9_A NLR family member X1; l 99.3 6E-14 2E-18 155.6 -2.3 110 140-249 73-197 (372)
401 3tm0_A Aminoglycoside 3'-phosp 99.3 8.5E-12 2.9E-16 131.2 12.3 148 672-830 10-214 (263)
402 2ifg_A High affinity nerve gro 99.3 3.2E-12 1.1E-16 140.3 9.0 102 145-249 14-117 (347)
403 2jwp_A Malectin, MGC80075; sug 99.3 8.9E-12 3E-16 122.4 8.9 117 482-605 51-170 (174)
404 1nd4_A Aminoglycoside 3'-phosp 99.1 5E-11 1.7E-15 124.7 6.5 130 685-830 29-215 (264)
405 2ra8_A Uncharacterized protein 99.0 1.9E-10 6.5E-15 126.5 6.6 204 140-363 108-341 (362)
406 4fs7_A Uncharacterized protein 99.0 2.8E-09 9.7E-14 119.0 16.2 259 93-362 72-376 (394)
407 2ra8_A Uncharacterized protein 99.0 1.7E-10 5.8E-15 126.9 3.9 37 91-127 106-150 (362)
408 3dxp_A Putative acyl-COA dehyd 99.0 8.9E-10 3.1E-14 121.4 9.1 142 681-830 43-249 (359)
409 4gt6_A Cell surface protein; l 98.9 4.4E-08 1.5E-12 109.3 18.1 246 109-363 80-368 (394)
410 4fs7_A Uncharacterized protein 98.8 4.1E-08 1.4E-12 109.6 14.8 220 109-340 155-376 (394)
411 4gt6_A Cell surface protein; l 98.7 1.4E-07 4.8E-12 105.2 16.6 258 93-362 88-388 (394)
412 3rw6_A Nuclear RNA export fact 98.6 1.1E-09 3.7E-14 114.6 -5.6 104 159-265 137-257 (267)
413 3r70_A Aminoglycoside phosphot 98.6 2E-07 7E-12 100.8 11.2 138 677-831 38-239 (320)
414 4h09_A Hypothetical leucine ri 98.5 1E-06 3.5E-11 97.5 16.9 267 93-372 47-352 (379)
415 3rw6_A Nuclear RNA export fact 98.5 1.4E-08 4.7E-13 106.2 0.5 96 144-241 148-257 (267)
416 3sg8_A APH(2'')-ID; antibiotic 98.5 1.3E-07 4.4E-12 101.4 7.5 137 681-830 25-224 (304)
417 3d1u_A Putative fructosamine-3 98.4 7.6E-07 2.6E-11 94.7 10.9 144 680-829 19-216 (288)
418 1io0_A Tropomodulin; LRR prote 98.4 5.7E-08 1.9E-12 96.3 1.8 90 159-248 32-136 (185)
419 3tdw_A Gentamicin resistance p 98.4 1.2E-06 3.9E-11 94.2 12.0 138 681-831 24-226 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.3 1.6E-06 5.5E-11 91.0 11.1 136 683-830 31-224 (272)
421 1io0_A Tropomodulin; LRR prote 98.3 1.2E-07 4.1E-12 94.0 2.2 117 204-343 29-164 (185)
422 3rfe_A Platelet glycoprotein I 98.3 5.8E-07 2E-11 83.4 6.3 73 286-390 12-85 (130)
423 4h09_A Hypothetical leucine ri 98.3 1E-05 3.6E-10 89.3 16.6 240 93-343 70-345 (379)
424 3ovc_A Hygromycin-B 4-O-kinase 98.2 3.4E-06 1.2E-10 92.7 11.1 145 680-830 45-244 (362)
425 3ats_A Putative uncharacterize 98.2 1.5E-06 5.3E-11 95.2 6.9 81 681-761 25-122 (357)
426 2q83_A YTAA protein; 2635576, 98.0 1.8E-05 6.2E-10 85.7 10.0 143 682-829 38-252 (346)
427 2olc_A MTR kinase, methylthior 97.8 2.3E-05 7.8E-10 87.2 6.6 75 681-757 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.6 0.00022 7.5E-09 76.3 11.1 140 681-825 41-232 (312)
429 3e4g_A ATP synthase subunit S, 97.6 5.5E-05 1.9E-09 73.4 5.5 84 163-246 61-150 (176)
430 3e4g_A ATP synthase subunit S, 97.6 3.9E-05 1.3E-09 74.4 4.2 88 137-224 59-153 (176)
431 3f7w_A Putative fructosamine-3 97.5 0.00024 8.3E-09 75.1 9.6 77 679-759 18-97 (288)
432 2pyw_A Uncharacterized protein 97.4 0.00031 1.1E-08 78.6 9.3 73 681-756 39-122 (420)
433 2ppq_A HSK, HK, homoserine kin 97.3 0.001 3.4E-08 71.3 12.1 161 666-829 7-217 (322)
434 1zyl_A Hypothetical protein YI 97.2 0.0023 8E-08 68.6 13.1 144 683-830 33-224 (328)
435 3csv_A Aminoglycoside phosphot 97.1 0.0024 8.2E-08 68.8 11.7 144 682-830 24-218 (333)
436 3dxq_A Choline/ethanolamine ki 97.1 0.00088 3E-08 71.2 7.9 141 681-830 23-203 (301)
437 3feg_A Choline/ethanolamine ki 97.0 0.0011 3.6E-08 73.0 8.4 144 681-829 55-254 (379)
438 1nw1_A Choline kinase (49.2 KD 97.0 0.00064 2.2E-08 76.2 6.7 73 681-759 78-159 (429)
439 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00029 9.8E-09 69.6 2.7 113 207-342 37-169 (197)
440 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00028 9.7E-09 69.7 2.3 116 183-318 37-169 (197)
441 2qg7_A Ethanolamine kinase PV0 96.9 0.0035 1.2E-07 70.7 10.9 74 681-759 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.6 0.0019 6.5E-08 59.5 5.1 37 212-248 32-68 (130)
443 3c5i_A Choline kinase; choline 96.4 0.0034 1.2E-07 68.7 6.7 73 682-759 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 96.0 0.016 5.4E-07 62.6 9.1 33 798-830 205-237 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.5 0.035 1.2E-06 61.1 9.4 145 681-829 57-280 (401)
446 3mes_A Choline kinase; malaria 95.1 0.018 6E-07 64.1 5.3 143 681-829 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 88.1 0.83 2.8E-05 50.2 7.7 29 801-829 246-280 (401)
448 4ano_A ESSB; membrane protein, 77.8 3.8 0.00013 40.6 6.7 88 730-832 48-136 (219)
449 4ann_A ESSB; membrane protein, 76.9 3 0.0001 41.2 5.6 95 722-832 36-131 (215)
450 2ks1_B Epidermal growth factor 76.0 2.6 9E-05 30.2 3.5 17 621-637 13-30 (44)
451 2jwa_A Receptor tyrosine-prote 69.8 2.8 9.5E-05 30.0 2.4 10 620-629 13-22 (44)
452 2l2t_A Receptor tyrosine-prote 69.6 3.8 0.00013 29.3 3.1 7 621-627 12-18 (44)
453 3cxl_A N-chimerin; SH2, RHO-GA 68.8 0.64 2.2E-05 52.2 -1.7 61 680-743 146-215 (463)
454 1qmo_E Mannose binding lectin, 44.9 12 0.00042 33.8 2.9 68 482-560 5-72 (133)
455 2lz0_A Uncharacterized protein 41.5 66 0.0023 27.2 6.9 47 150-197 7-53 (100)
456 2k1k_A Ephrin type-A receptor 40.3 18 0.00063 24.9 2.5 14 617-630 9-22 (38)
457 2klu_A T-cell surface glycopro 36.5 25 0.00086 27.2 2.9 7 639-645 31-37 (70)
458 2lz0_A Uncharacterized protein 35.6 79 0.0027 26.7 6.5 47 174-221 7-53 (100)
459 1nls_A Concanavalin A; lectin, 32.1 33 0.0011 34.3 4.0 69 482-561 6-74 (237)
460 2l8s_A Integrin alpha-1; trans 21.8 57 0.0019 24.3 2.5 6 623-628 14-19 (54)
461 3ujo_A Legume lectin; carbohyd 21.5 47 0.0016 34.0 2.9 64 481-556 143-206 (281)
462 3ipv_A Lectin alpha chain; gal 20.5 48 0.0017 33.4 2.7 64 481-555 123-186 (251)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.8e-42 Score=374.91 Aligned_cols=295 Identities=26% Similarity=0.435 Sum_probs=252.1
Q ss_pred CCCHHHHHHHHHHHHHhCCC----CCCCCCCCCCCCCCccccCCCCCCCccceeecCCCCcceEEEEEecCCCccc--cC
Q 003134 35 KLHAEEVKALKQIGRKLGKK----DWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTG--TL 108 (845)
Q Consensus 35 ~~~~~~~~aL~~~~~~~~~~----~W~~~~d~c~~~~~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~g--~~ 108 (845)
.|+++|++||++||+++++. +|+.+.|||. +.|. ||+|+.....++|+.|+|++++++| .+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~--~~w~-----------gv~C~~~~~~~~l~~L~L~~~~l~~~~~~ 68 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN--RTWL-----------GVLCDTDTQTYRVNNLDLSGLNLPKPYPI 68 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT--TCST-----------TEEECCSSSCCCEEEEEEECCCCSSCEEC
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCc--CCCc-----------ceEeCCCCCCceEEEEECCCCCccCCccc
Confidence 58899999999999999763 7988888884 2475 8999865444799999999999999 99
Q ss_pred CccccCCCCCCEEeccC-CcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccC
Q 003134 109 PTELSKLRYLKQLDLSR-NCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKL 186 (845)
Q Consensus 109 p~~l~~L~~L~~L~Ls~-N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 186 (845)
|+.|.++++|++|+|++ |.+++.+|..+..+ +|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..|..+
T Consensus 69 ~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 148 (313)
T 1ogq_A 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL 148 (313)
T ss_dssp CGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC
T ss_pred ChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcC
Confidence 99999999999999995 99999999999888 89999999999998999999999999999999999999999999999
Q ss_pred CCccEEEeecCcCcccCChhhhCCC-CCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEE
Q 003134 187 INLQKLILSSNSFTGELPAELTKLT-NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLR 265 (845)
Q Consensus 187 ~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 265 (845)
++|++|+|++|++++.+|..+.+++ +|++|+|++|++++.+|..|..++ |++|+|++|++++.+|..|..+++|+.|+
T Consensus 149 ~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 149 PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 9999999999999989999999988 899999999999999999998887 99999999999988888888887776665
Q ss_pred cCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC
Q 003134 266 ISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 266 Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
|++|.+++.+|. +..+++|++|+|++|+|++.+|..|..+++|++|+|++|+++|.
T Consensus 228 -----------------------L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 283 (313)
T 1ogq_A 228 -----------------------LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283 (313)
T ss_dssp -----------------------CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred -----------------------CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccccc
Confidence 455555555555 67778888888888888888888888888888888888888888
Q ss_pred CChhh-hcCCceEEeecCC-CcCC
Q 003134 346 VPKYI-FNSNKNVDISLNN-FTWE 367 (845)
Q Consensus 346 ip~~~-~~~l~~L~ls~N~-l~~~ 367 (845)
+|..- ...++.+++++|+ +.|.
T Consensus 284 ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 284 IPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CCCCccccccChHHhcCCCCccCC
Confidence 88753 3577888888887 4443
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.3e-41 Score=399.30 Aligned_cols=349 Identities=20% Similarity=0.277 Sum_probs=294.2
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccCCCCCCCc---cceeecCCCCcceEEEEEecCCCccccCCcccc
Q 003134 37 HAEEVKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGFE---SNVTCDCSSATCHVVTIALKAQNLTGTLPTELS 113 (845)
Q Consensus 37 ~~~~~~aL~~~~~~~~~~~W~~~~d~c~~~~~w~~~~~~~~~~~---~~v~C~~~~~~~~v~~L~l~~~~l~g~~p~~l~ 113 (845)
...|++||.++++++++..|....++|....+|.... .++.| .||+|+.. +||+.|+|+++++.|.+|++|+
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~--~~c~w~~~~GV~C~~~---~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNK--ELDMWGAQPGVSLNSN---GRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSS--CGGGTTCCTTEEECTT---CCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCC--CcccccCCCCeEEcCC---CCEEEEEecCcccCCcCChHHh
Confidence 3569999999999999999998777776666897432 23456 89999854 7999999999999999999999
Q ss_pred CCCCCCEEeccCCc------------------------------------------------------------------
Q 003134 114 KLRYLKQLDLSRNC------------------------------------------------------------------ 127 (845)
Q Consensus 114 ~L~~L~~L~Ls~N~------------------------------------------------------------------ 127 (845)
+|++|++|+|++|.
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 99999999999984
Q ss_pred ------------ccCCCccccccc-ceeEEEecCCCCCCC-----------------cccccc--cccccceeEeecccC
Q 003134 128 ------------LTGSFSPQWASL-QLVELSVMGNRLSGP-----------------FPKVLT--NITTLKNLSIEGNLF 175 (845)
Q Consensus 128 ------------l~~~~~~~~~~l-~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l 175 (845)
+++ +|..++.+ +|++|+|++|+|++. +|..++ ++++|++|+|++|++
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l 261 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPN 261 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTT
T ss_pred hhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcC
Confidence 445 77888888 999999999999996 999999 999999999999999
Q ss_pred CCCCCcccccCCCccEEEeecCc-Ccc-cCChhhhCC------CCCCcEEeecCcCcccCch--hhcCCcccceEEecCC
Q 003134 176 TGSIPPDIRKLINLQKLILSSNS-FTG-ELPAELTKL------TNLNDLRISDNNFSGKIPE--FIGKWKKIQKLHIQGS 245 (845)
Q Consensus 176 ~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N 245 (845)
.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|++|+|++|
T Consensus 262 ~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N 340 (636)
T 4eco_A 262 LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYN 340 (636)
T ss_dssp CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSC
T ss_pred CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCC
Confidence 99999999999999999999998 998 899998887 99999999999999 7888 9999999999999999
Q ss_pred cCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCC-ccEEEccCCcCcccCcccccCCC--CcCEEeCCCCCCCCCC
Q 003134 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMN-LKTLILTKCLIHGEIPDYIGDMT--KLKNIDLSFNNLTGGI 322 (845)
Q Consensus 246 ~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~g~~ 322 (845)
+++|.+| .++++++|+.|++++|.+...+.......+ |+.|+|++|.++ .+|..+..++ +|+.|+|++|++++.+
T Consensus 341 ~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~ 418 (636)
T 4eco_A 341 QLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVD 418 (636)
T ss_dssp CCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTT
T ss_pred cCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcc
Confidence 9999999 999999999999999998855444333336 999999999999 7888887765 8999999999999999
Q ss_pred chhhh-------cCCCcCEEEccCCcccCCCChhhh---cCCceEEeecCCCcCCCCCC-CCCC---CCCceeeeeecCC
Q 003134 323 PTTFE-------KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDP-IECP---RGSVNLVESYSSP 388 (845)
Q Consensus 323 p~~~~-------~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~l~~~~p~~-~~c~---~~~~~~l~~l~~~ 388 (845)
|..|. .+++|++|+|++|+++ .+|..++ ..|+.|+|++|+++ .+|.. +... +..+..++.++.+
T Consensus 419 p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls 496 (636)
T 4eco_A 419 GKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLR 496 (636)
T ss_dssp TCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECC
T ss_pred hhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECc
Confidence 99888 8889999999999999 6776653 57899999999999 44432 2211 2233367888888
Q ss_pred CCCCCCcc
Q 003134 389 RNKLDKVH 396 (845)
Q Consensus 389 ~n~~~~~~ 396 (845)
.|++....
T Consensus 497 ~N~l~~lp 504 (636)
T 4eco_A 497 FNKLTKLS 504 (636)
T ss_dssp SSCCCBCC
T ss_pred CCcCCccC
Confidence 88888543
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.1e-39 Score=393.31 Aligned_cols=352 Identities=19% Similarity=0.243 Sum_probs=285.0
Q ss_pred cCCCHHHHHHHHHHHHHhCCCCCCCCC-----CC--CCCCCCccccCC-CCCCCccceeecCCCCcceEEEEEecCCCcc
Q 003134 34 NKLHAEEVKALKQIGRKLGKKDWNFGV-----DP--CSQKGNWELSSD-DKKGFESNVTCDCSSATCHVVTIALKAQNLT 105 (845)
Q Consensus 34 ~~~~~~~~~aL~~~~~~~~~~~W~~~~-----d~--c~~~~~w~~~~~-~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~ 105 (845)
++...+|++||++||+++++.+|+.+. +| |. |....+ +..+...||+|++ .+||+.|+|+++++.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~----W~~~~~~~~w~~~~GV~C~~---~~~V~~L~Ls~~~L~ 336 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGKNWRYYSGTINNTIHSLN----WNFNKELDMWGDQPGVDLDN---NGRVTGLSLAGFGAK 336 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCCSSCSSCCCCCS----CCCSSCGGGTTCCTTEEECT---TSCEEEEECTTTCCE
T ss_pred cccchHHHHHHHHHHHHcCCCCCCcCCCcccccCCccc----cccccccccccCcCceEecC---CCCEEEEECccCCCC
Confidence 345578999999999999988998765 67 64 632211 1111226999986 479999999999999
Q ss_pred ccCCccccCCCCCCEEec-cCCcccCC-----------------------------------------------------
Q 003134 106 GTLPTELSKLRYLKQLDL-SRNCLTGS----------------------------------------------------- 131 (845)
Q Consensus 106 g~~p~~l~~L~~L~~L~L-s~N~l~~~----------------------------------------------------- 131 (845)
|.+|++|++|++|++|+| ++|.++|.
T Consensus 337 G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 337 GRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 999999999999999999 77866554
Q ss_pred -----------------------Cccccccc-ceeEEEecCCCCCC-----------------Ccccccc--ccccccee
Q 003134 132 -----------------------FSPQWASL-QLVELSVMGNRLSG-----------------PFPKVLT--NITTLKNL 168 (845)
Q Consensus 132 -----------------------~~~~~~~l-~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L 168 (845)
+|..+..+ +|++|+|++|+|++ .+|..++ ++++|++|
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred cccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 67778888 89999999999998 3888877 99999999
Q ss_pred EeecccCCCCCCcccccCCCccEEEeecCc-Ccc-cCChhhhCCC-------CCCcEEeecCcCcccCch--hhcCCccc
Q 003134 169 SIEGNLFTGSIPPDIRKLINLQKLILSSNS-FTG-ELPAELTKLT-------NLNDLRISDNNFSGKIPE--FIGKWKKI 237 (845)
Q Consensus 169 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L 237 (845)
+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+|+ .+|. .|+++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 999999999999999999999999999998 998 8888777665 9999999999999 7888 89999999
Q ss_pred ceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCC-ccEEEccCCcCcccCcccccCCCC--cCEEeCC
Q 003134 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMN-LKTLILTKCLIHGEIPDYIGDMTK--LKNIDLS 314 (845)
Q Consensus 238 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls 314 (845)
++|+|++|+++ .+| .|+++++|+.|+|++|.+...+.......+ |+.|+|++|.|+ .+|..+..++. |+.|+|+
T Consensus 576 ~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls 652 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFS 652 (876)
T ss_dssp CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECC
T ss_pred CEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECc
Confidence 99999999999 778 899999999999999999844433333336 999999999999 78888877755 9999999
Q ss_pred CCCCCCCCchhh---h--cCCCcCEEEccCCcccCCCChhhh---cCCceEEeecCCCcCCCCCCCCCC---CCCceeee
Q 003134 315 FNNLTGGIPTTF---E--KLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPIECP---RGSVNLVE 383 (845)
Q Consensus 315 ~N~l~g~~p~~~---~--~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~l~~~~p~~~~c~---~~~~~~l~ 383 (845)
+|+|+|.+|... . .+++|+.|+|++|+++ .+|..++ ..|+.|+|++|+++...+..+... |..+..++
T Consensus 653 ~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~ 731 (876)
T 4ecn_A 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLT 731 (876)
T ss_dssp SSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCC
T ss_pred CCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCcc
Confidence 999998776432 2 3458999999999999 7787765 578999999999983333222211 33445788
Q ss_pred eecCCCCCCCCccC
Q 003134 384 SYSSPRNKLDKVHP 397 (845)
Q Consensus 384 ~l~~~~n~~~~~~~ 397 (845)
.++.+.|++.....
T Consensus 732 ~L~Ls~N~L~~lp~ 745 (876)
T 4ecn_A 732 TIDLRFNKLTSLSD 745 (876)
T ss_dssp EEECCSSCCCCCCG
T ss_pred EEECCCCCCccchH
Confidence 88888888885443
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-39 Score=396.43 Aligned_cols=336 Identities=27% Similarity=0.390 Sum_probs=249.2
Q ss_pred hcCCCHHHHHHHHHHHHHhCC----CCCCCCCCCCCCCCCccccCCCCCCCccceeecCCCCcceEEEEEecCCCcccc-
Q 003134 33 ANKLHAEEVKALKQIGRKLGK----KDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGT- 107 (845)
Q Consensus 33 ~~~~~~~~~~aL~~~~~~~~~----~~W~~~~d~c~~~~~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~g~- 107 (845)
++...++|++||++||+++.+ .+|+.+.|||. |+ ||+|+ .+||+.|+|+++++.|.
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C~----w~-----------gv~C~----~~~v~~L~L~~~~l~g~~ 66 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPCT----FD-----------GVTCR----DDKVTSIDLSSKPLNVGF 66 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGGG----ST-----------TEEEE----TTEEEEEECTTSCCCEEH
T ss_pred cccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCcC----Cc-----------ceEEC----CCcEEEEECCCCCcCCcc
Confidence 334467899999999999864 37987788884 65 89998 37999999999999987
Q ss_pred --CC-----------------------ccccCCCCCCEEeccCCcccCCCcc--ccccc-ceeEEEecCCCCCCCccccc
Q 003134 108 --LP-----------------------TELSKLRYLKQLDLSRNCLTGSFSP--QWASL-QLVELSVMGNRLSGPFPKVL 159 (845)
Q Consensus 108 --~p-----------------------~~l~~L~~L~~L~Ls~N~l~~~~~~--~~~~l-~L~~L~Ls~N~l~~~~p~~~ 159 (845)
+| ..|+++++|++|+|++|.++|.+|. .++.+ +|++|+|++|.+++.+|..+
T Consensus 67 ~~l~~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 146 (768)
T 3rgz_A 67 SAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG 146 (768)
T ss_dssp HHHHHHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCS
T ss_pred CccChhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHH
Confidence 55 4566777788888888888777776 77777 78888888888777777665
Q ss_pred -ccccccceeEeecccCCCCCCcc---cccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCc
Q 003134 160 -TNITTLKNLSIEGNLFTGSIPPD---IRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK 235 (845)
Q Consensus 160 -~~l~~L~~L~Ls~N~l~g~~p~~---~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 235 (845)
.++++|++|+|++|++++..|.. +.++++|++|+|++|++++.+|. .++++|++|+|++|++++.+|. +++++
T Consensus 147 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~ 223 (768)
T 3rgz_A 147 GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCS 223 (768)
T ss_dssp CCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCC
T ss_pred hccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCC
Confidence 67777888888888777776665 66777777777777777765553 6788888888888888887777 88888
Q ss_pred ccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCC-CCcCEEeCC
Q 003134 236 KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLS 314 (845)
Q Consensus 236 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls 314 (845)
+|++|+|++|++++.+|..++++++|+.|++++|.+.+..+.. ...+|++|+|++|++++.+|..+..+ ++|++|+|+
T Consensus 224 ~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls 302 (768)
T 3rgz_A 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS 302 (768)
T ss_dssp SCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECC
T ss_pred CCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECc
Confidence 9999999999998888888888889999988888876544433 33467777777777777777776654 777777777
Q ss_pred CCCCCCCCchhhhcCCCcCEEEccCCcccCCCChh-h--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCC
Q 003134 315 FNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNK 391 (845)
Q Consensus 315 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~-~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~ 391 (845)
+|++++.+|..|+++++|++|+|++|+++|.+|.. + ...|+.|++++|++++.+|..+..- ..-++.++.+.|+
T Consensus 303 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l---~~~L~~L~Ls~N~ 379 (768)
T 3rgz_A 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL---SASLLTLDLSSNN 379 (768)
T ss_dssp SSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHH---TTTCSEEECCSSE
T ss_pred CCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhh---hcCCcEEEccCCC
Confidence 77777777777777777777777777777777765 3 2367777777777776666443110 0134445555555
Q ss_pred CCC
Q 003134 392 LDK 394 (845)
Q Consensus 392 ~~~ 394 (845)
+.+
T Consensus 380 l~~ 382 (768)
T 3rgz_A 380 FSG 382 (768)
T ss_dssp EEE
T ss_pred cCC
Confidence 543
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-37 Score=377.01 Aligned_cols=277 Identities=30% Similarity=0.497 Sum_probs=163.5
Q ss_pred EEEEEecCCCccccCCccccC--CCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 94 VVTIALKAQNLTGTLPTELSK--LRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 94 v~~L~l~~~~l~g~~p~~l~~--L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
++.|++++|.++|.+|+.+.. +++|++|+|++|++++.+|..+..+ +|++|+|++|++++.+|..|.++++|++|+|
T Consensus 370 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 449 (768)
T 3rgz_A 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449 (768)
T ss_dssp CSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEEC
Confidence 334444444444444444433 4455555555555555555555555 5666666666666666666666666666666
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 250 (845)
++|++++.+|..|..+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..|+.+++|++|+|++|+++|.
T Consensus 450 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 529 (768)
T 3rgz_A 450 WLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEE
T ss_pred CCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCc
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCccc---------------------------------------------------
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKL--------------------------------------------------- 279 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l--------------------------------------------------- 279 (845)
+|..++++++|+.|++++|.+++..+..+
T Consensus 530 ~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 609 (768)
T 3rgz_A 530 IPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLST 609 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGG
T ss_pred CCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccc
Confidence 66666666666666666665543222111
Q ss_pred -------------------cc-CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccC
Q 003134 280 -------------------DK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTG 339 (845)
Q Consensus 280 -------------------~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~ 339 (845)
.. .+|+.|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++
T Consensus 610 ~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~ 689 (768)
T 3rgz_A 610 RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689 (768)
T ss_dssp TCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCS
T ss_pred ccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCC
Confidence 00 1455666666666666666666666666666666666666666666666666666666
Q ss_pred CcccCCCChhhh--cCCceEEeecCCCcCCCCC
Q 003134 340 NKLTGPVPKYIF--NSNKNVDISLNNFTWESSD 370 (845)
Q Consensus 340 N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p~ 370 (845)
|+++|.+|..+. ..|+.||+++|+++|.+|.
T Consensus 690 N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp SCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred CcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 666666666553 3566666666666666663
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.6e-36 Score=343.84 Aligned_cols=278 Identities=17% Similarity=0.207 Sum_probs=209.2
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCC-ccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF-SPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~-~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|..+ +|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57899999999999988999999999999999999998655 5678888 999999999999999999999999999999
Q ss_pred eecccCCCCCCcc--cccCCCccEEEeecCcCcccCChh-hhCCCCCCcEEeecCcCcccCchhhcCC------------
Q 003134 170 IEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELPAE-LTKLTNLNDLRISDNNFSGKIPEFIGKW------------ 234 (845)
Q Consensus 170 Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------------ 234 (845)
|++|++++.+|.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|++++..|..+..+
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999865555 899999999999999999887876 8899999999999999998888766544
Q ss_pred ----------------------cccceEEecCCcCCCCcchhhhcC----------------------------------
Q 003134 235 ----------------------KKIQKLHIQGSSLEGPIPASISAL---------------------------------- 258 (845)
Q Consensus 235 ----------------------~~L~~L~Ls~N~l~g~~p~~~~~l---------------------------------- 258 (845)
++|++|+|++|++++..|..+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 567777777777766555444322
Q ss_pred -----CCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCc
Q 003134 259 -----TSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 332 (845)
Q Consensus 259 -----~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 332 (845)
++|+.|++++|.+....+..+... +|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|.++++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 356666666666655544444433 56666666666666666666666666666666666665556666666666
Q ss_pred CEEEccCCcccCCCChhhh--cCCceEEeecCCCcCCCC
Q 003134 333 NFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESS 369 (845)
Q Consensus 333 ~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p 369 (845)
++|+|++|++++..|..+. ..|+.|+|++|++++..+
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CEEECCCCcccccChhhccccccccEEECCCCccccCCH
Confidence 6666666666655555543 356666666666665444
No 7
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=339.71 Aligned_cols=286 Identities=20% Similarity=0.220 Sum_probs=215.2
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
..+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 3478899999999999888999999999999999999999999999998 999999999999988888899999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++.+
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~ 190 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA 190 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE
Confidence 99999998888899999999999999999998888899999999999999999998877889999999999999999988
Q ss_pred CcchhhhcCCCCCEEEcCCCCCCCCCCc-ccccCC------------------------ccEEEccCCcCcccCcccccC
Q 003134 250 PIPASISALTSLTDLRISDLKGSESAFP-KLDKMN------------------------LKTLILTKCLIHGEIPDYIGD 304 (845)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~n~~~~~~~~-~l~~~~------------------------L~~L~Ls~N~l~~~~p~~~~~ 304 (845)
..+..|..+++|+.|++++|......+. .+...+ |+.|+|++|.|++..+..|.+
T Consensus 191 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (477)
T 2id5_A 191 IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHE 270 (477)
T ss_dssp ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTT
T ss_pred eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccc
Confidence 8888888888888877777654332221 122224 455555555555444444555
Q ss_pred CCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceee
Q 003134 305 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLV 382 (845)
Q Consensus 305 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l 382 (845)
+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+ ..+|+.|+|++| +|.|+|...|+.
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~l~c~c~~~~~~ 342 (477)
T 2id5_A 271 LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN--------PLACDCRLLWVF 342 (477)
T ss_dssp CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS--------CEECSGGGHHHH
T ss_pred cccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC--------CccCccchHhHH
Confidence 5555555555555554445555555555555555555553222222 124555555555 566777666555
Q ss_pred ee
Q 003134 383 ES 384 (845)
Q Consensus 383 ~~ 384 (845)
.|
T Consensus 343 ~~ 344 (477)
T 2id5_A 343 RR 344 (477)
T ss_dssp TT
T ss_pred hh
Confidence 44
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1e-34 Score=346.60 Aligned_cols=284 Identities=19% Similarity=0.273 Sum_probs=252.7
Q ss_pred CccccCCccccCCCCCCEEeccCCcccCC-----------------Cccccc--cc-ceeEEEecCCCCCCCcccccccc
Q 003134 103 NLTGTLPTELSKLRYLKQLDLSRNCLTGS-----------------FSPQWA--SL-QLVELSVMGNRLSGPFPKVLTNI 162 (845)
Q Consensus 103 ~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~-----------------~~~~~~--~l-~L~~L~Ls~N~l~~~~p~~~~~l 162 (845)
+++| +|+.|+++++|++|+|++|+|++. +|..++ .+ +|++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4556 899999999999999999999996 899988 88 99999999999999999999999
Q ss_pred cccceeEeeccc-CCC-CCCcccccC------CCccEEEeecCcCcccCCh--hhhCCCCCCcEEeecCcCcccCchhhc
Q 003134 163 TTLKNLSIEGNL-FTG-SIPPDIRKL------INLQKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPEFIG 232 (845)
Q Consensus 163 ~~L~~L~Ls~N~-l~g-~~p~~~~~l------~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 232 (845)
++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .|+++++|++|+|++|+++|.+| .|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999999 998 899999887 99999999999999 8898 89999999999999999999999 999
Q ss_pred CCcccceEEecCCcCCCCcchhhhcCCC-CCEEEcCCCCCCCCCCcccccC---CccEEEccCCcCcccCccccc-----
Q 003134 233 KWKKIQKLHIQGSSLEGPIPASISALTS-LTDLRISDLKGSESAFPKLDKM---NLKTLILTKCLIHGEIPDYIG----- 303 (845)
Q Consensus 233 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~n~~~~~~~~~l~~~---~L~~L~Ls~N~l~~~~p~~~~----- 303 (845)
.+++|++|+|++|+++ .+|..+.++++ |+.|++++|.++..+. .+... +|+.|+|++|.+++.+|..|.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPN-IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCS-CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccch-hhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999999 88999999999 9999999999995543 33332 799999999999999999998
Q ss_pred --CCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhc----------CCceEEeecCCCcCCCCCC
Q 003134 304 --DMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN----------SNKNVDISLNNFTWESSDP 371 (845)
Q Consensus 304 --~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~----------~l~~L~ls~N~l~~~~p~~ 371 (845)
.+++|++|+|++|+|+...+..+..+++|++|+|++|+++ .+|...+. .|+.|+|++|+++ .+|..
T Consensus 429 ~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~ 506 (636)
T 4eco_A 429 PFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDD 506 (636)
T ss_dssp CCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGG
T ss_pred cccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChh
Confidence 8899999999999999655556777999999999999999 88877654 8999999999999 45543
Q ss_pred CCCCCCCceeeeeecCCCCCCCCc
Q 003134 372 IECPRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 372 ~~c~~~~~~~l~~l~~~~n~~~~~ 395 (845)
+. ...+..++.++.+.|++.+.
T Consensus 507 ~~--~~~l~~L~~L~Ls~N~l~~i 528 (636)
T 4eco_A 507 FR--ATTLPYLVGIDLSYNSFSKF 528 (636)
T ss_dssp GS--TTTCTTCCEEECCSSCCSSC
T ss_pred hh--hccCCCcCEEECCCCCCCCc
Confidence 31 01345577788999988863
No 9
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.3e-34 Score=339.81 Aligned_cols=308 Identities=19% Similarity=0.229 Sum_probs=238.1
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
+..++.|||++|.|++..+.+|.++++|++|||++|+|+++.+.+|..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 3578999999999998888899999999999999999999999999999 999999999999988888999999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcc-cCChhhhCCCCCCcEEeecCcCcccCchhhcC---------------
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIGK--------------- 233 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------------- 233 (845)
|++|+|++..+..|+++++|++|+|++|++++ .+|..+.++++|++|+|++|+|++..|..|..
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998877789999999999999999986 46888999999999999999887654432211
Q ss_pred --------------------------------------------------------------------------------
Q 003134 234 -------------------------------------------------------------------------------- 233 (845)
Q Consensus 234 -------------------------------------------------------------------------------- 233 (845)
T Consensus 211 n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 211 NPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred CcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence
Q ss_pred -------------------------------------------------------------------------------C
Q 003134 234 -------------------------------------------------------------------------------W 234 (845)
Q Consensus 234 -------------------------------------------------------------------------------l 234 (845)
+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred hcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 1
Q ss_pred cccceEEecCCcCCCC--c------------------------------------------------chhhhcCCCCCEE
Q 003134 235 KKIQKLHIQGSSLEGP--I------------------------------------------------PASISALTSLTDL 264 (845)
Q Consensus 235 ~~L~~L~Ls~N~l~g~--~------------------------------------------------p~~~~~l~~L~~L 264 (845)
++|+.|++++|.+... . +..+..+.+++.+
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l 450 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 450 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccc
Confidence 2333344444433210 0 0112233334444
Q ss_pred EcCCCCCCCCC-------------------------CcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCC
Q 003134 265 RISDLKGSESA-------------------------FPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNL 318 (845)
Q Consensus 265 ~Ls~n~~~~~~-------------------------~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 318 (845)
+++.|.+.... +..+... +|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 451 ~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l 530 (635)
T 4g8a_A 451 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 530 (635)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred cccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcC
Confidence 44444432221 1222222 788899999999988888888899999999999999
Q ss_pred CCCCchhhhcCCCcCEEEccCCcccCCCChhhh---cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCc
Q 003134 319 TGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 319 ~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~ 395 (845)
++..|..|.++++|++|+|++|+|++..|..+. .+|+.|+|++| ||.|+|...+++.|+......+...
T Consensus 531 ~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~N--------p~~C~C~~~~~~~wl~~~~~~~~~~ 602 (635)
T 4g8a_A 531 FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN--------DFACTCEHQSFLQWIKDQRQLLVEV 602 (635)
T ss_dssp CBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTC--------CBCCSGGGHHHHHHHHHTTTTBSCG
T ss_pred CCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCC--------CCcccCCcHHHHHHHHhCCCccCCC
Confidence 888888888899999999999999888887763 47888999998 8999999999999997665544332
Q ss_pred cCcccCCCCCCCCCCc
Q 003134 396 HPCLRQNFPCSAPADQ 411 (845)
Q Consensus 396 ~~c~~~~~~c~~~~~~ 411 (845)
....|..|...
T Consensus 603 -----~~~~C~~P~~~ 613 (635)
T 4g8a_A 603 -----ERMECATPSDK 613 (635)
T ss_dssp -----GGCBBCSSTTT
T ss_pred -----CCceeCCchHH
Confidence 23446555443
No 10
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.7e-34 Score=312.86 Aligned_cols=246 Identities=26% Similarity=0.405 Sum_probs=185.1
Q ss_pred CCCCEEeccCCcccC--CCccccccc-ceeEEEecC-CCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 116 RYLKQLDLSRNCLTG--SFSPQWASL-QLVELSVMG-NRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 116 ~~L~~L~Ls~N~l~~--~~~~~~~~l-~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
.+++.|+|++|.+++ .+|..+..+ +|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356677777777776 666666666 666666663 6666666666666666666666666666666666666666666
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCc-ccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWK-KIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~ 270 (845)
|+|++|++++.+|..|.++++|++|+|++|+|++.+|..+..++ +|++|+|++|++++.+|..+..+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l------------ 197 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL------------ 197 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC------------
Confidence 66666666666666666666666666666666666666666665 66666666666666666665554
Q ss_pred CCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh
Q 003134 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350 (845)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~ 350 (845)
+|+.|+|++|.+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+
T Consensus 198 ------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 198 ------------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp ------------CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGG
T ss_pred ------------cccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHH
Confidence 456778888899999999999999999999999999977776 8899999999999999999999988
Q ss_pred h--cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCC
Q 003134 351 F--NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNK 391 (845)
Q Consensus 351 ~--~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~ 391 (845)
. ..|+.|+|++|+++|.+|.. ..+..++.++...|+
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-----~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-----GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-----TTGGGSCGGGTCSSS
T ss_pred hcCcCCCEEECcCCcccccCCCC-----ccccccChHHhcCCC
Confidence 5 48999999999999999853 345556667777665
No 11
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.9e-34 Score=311.19 Aligned_cols=277 Identities=20% Similarity=0.307 Sum_probs=209.6
Q ss_pred hhcCCCHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCcccc--CCCCCCCccceeecCC------CCcceEEEEEecCCC
Q 003134 32 TANKLHAEEVKALKQIGRKLGKKDWNFGVDPCSQKGNWELS--SDDKKGFESNVTCDCS------SATCHVVTIALKAQN 103 (845)
Q Consensus 32 ~~~~~~~~~~~aL~~~~~~~~~~~W~~~~d~c~~~~~w~~~--~~~~~~~~~~v~C~~~------~~~~~v~~L~l~~~~ 103 (845)
+......+|+.||++||+++. .|+|.|.+.|... .....+.|.|+.|+.. ....+|+.|+|++|+
T Consensus 20 ~~~~~~~~~~~aLl~~k~~~~-------~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~ 92 (328)
T 4fcg_A 20 QGSTALRPYHDVLSQWQRHYN-------ADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVP 92 (328)
T ss_dssp C--CCCCCHHHHHHHHHHHHH-------HCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred eccccCchHHHHHHHHHHhcc-------CCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCC
Confidence 334455679999999999873 3455555555311 1122223457888521 123578889999988
Q ss_pred ccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcc
Q 003134 104 LTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPD 182 (845)
Q Consensus 104 l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 182 (845)
++ .+|+.+.++++|++|+|++|.|+ .+|..+..+ +|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..
T Consensus 93 l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~ 169 (328)
T 4fcg_A 93 LP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEP 169 (328)
T ss_dssp CS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSC
T ss_pred ch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChh
Confidence 88 77888888889999999888888 677777777 8888888888888 67878888888888888888888888877
Q ss_pred ccc---------CCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcch
Q 003134 183 IRK---------LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 183 ~~~---------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
+.. +++|++|+|++|+|+ .+|..+.++++|++|+|++|++++ +|..+..+++|++|+|++|++.+.+|.
T Consensus 170 ~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~ 247 (328)
T 4fcg_A 170 LASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPP 247 (328)
T ss_dssp SEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCC
T ss_pred HhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHH
Confidence 654 788888888888887 777778888888888888888874 555677788888888888888777777
Q ss_pred hhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcC
Q 003134 254 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (845)
Q Consensus 254 ~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 333 (845)
.++++++|+.| +|++|.+.+.+|..+.++++|++|+|++|++.+.+|..+.++++|+
T Consensus 248 ~~~~l~~L~~L-----------------------~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 248 IFGGRAPLKRL-----------------------ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp CTTCCCCCCEE-----------------------ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred HhcCCCCCCEE-----------------------ECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 77766655544 5666667778888888888999999999888888998899999988
Q ss_pred EEEccCCccc
Q 003134 334 FMYLTGNKLT 343 (845)
Q Consensus 334 ~L~L~~N~l~ 343 (845)
.+++..|.+.
T Consensus 305 ~l~l~~~~~~ 314 (328)
T 4fcg_A 305 IILVPPHLQA 314 (328)
T ss_dssp EEECCGGGSC
T ss_pred EEeCCHHHHH
Confidence 8888877665
No 12
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.9e-33 Score=334.08 Aligned_cols=288 Identities=20% Similarity=0.295 Sum_probs=168.6
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEee
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 171 (845)
+++.|++++|.+++..+..|.++++|++|+|++|+++ .+|..+..+ +|++|+|++|++++..|..+.++++|++|+|+
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 5677777777777666666777777777777777766 344555555 67777777777766666666666666666666
Q ss_pred cccCCCCCCcc-cccCCCccEEEeecCcCcccC--ChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 172 GNLFTGSIPPD-IRKLINLQKLILSSNSFTGEL--PAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 172 ~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
+|.+.+.+|.. +..+++|++|+|++|++++.. |..+.++++|++|+|++|++++..|..|..+++|++|++++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 66666555443 555666666666666665444 445555555555555555555555555555555555555555555
Q ss_pred CCcch-hhhcCCCCCEEEcCCCCCCCCCCcccccC----------------------------CccEEEccCCcCcccCc
Q 003134 249 GPIPA-SISALTSLTDLRISDLKGSESAFPKLDKM----------------------------NLKTLILTKCLIHGEIP 299 (845)
Q Consensus 249 g~~p~-~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~----------------------------~L~~L~Ls~N~l~~~~p 299 (845)
+..|. .+.++++|+.|++++|.+....+..+... +|+.|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 44332 24555555555555555444433333222 45555555555555555
Q ss_pred ccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCC
Q 003134 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRG 377 (845)
Q Consensus 300 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~ 377 (845)
..|.++++|++|+|++|++++.+|..|.++++| +|+|++|++++..|..+ ...++.|++++| ||.|+|.
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N--------~~~c~c~ 564 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQN--------PLDCTCS 564 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTC--------CEECSGG
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCC--------CccccCC
Confidence 555555555555555555555555555555555 55555555554444433 234555555555 7899999
Q ss_pred CceeeeeecCCCC
Q 003134 378 SVNLVESYSSPRN 390 (845)
Q Consensus 378 ~~~~l~~l~~~~n 390 (845)
..++++|+.....
T Consensus 565 ~~~~~~w~~~~~~ 577 (606)
T 3t6q_A 565 NIYFLEWYKENMQ 577 (606)
T ss_dssp GHHHHHHHHHCGG
T ss_pred cHHHHHHHHhCcc
Confidence 9999999876543
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.3e-33 Score=332.09 Aligned_cols=134 Identities=28% Similarity=0.323 Sum_probs=86.1
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..+..|.++++|++|+|++|+++++.|..|..+ +|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 456677777777776666666677777777777777766666666666 6666666666666666666666666666666
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcc-cCChhhhCCCCCCcEEeecCcCcc
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSG 225 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~ 225 (845)
++|++++..|..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 6666665555556666666666666666654 345556666666665555555544
No 14
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.6e-33 Score=316.23 Aligned_cols=295 Identities=20% Similarity=0.198 Sum_probs=253.9
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCc-ccccccccccceeEeecc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPF-PKVLTNITTLKNLSIEGN 173 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N 173 (845)
.++..+++++ .+|. +. ++|++|+|++|.|++..|..|..+ +|++|+|++|.+.+.+ +..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4566677776 4565 33 789999999999999999999999 9999999999998665 568999999999999999
Q ss_pred cCCCCCCcccccCCCccEEEeecCcCcccCChh--hhCCCCCCcEEeecCcCcccCchh-hcCCcccceEEecCCcCCCC
Q 003134 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAE--LTKLTNLNDLRISDNNFSGKIPEF-IGKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 174 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~ 250 (845)
++++..|..|.++++|++|+|++|++++.+|.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|++++.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 999988999999999999999999999866655 999999999999999999888876 89999999999999999998
Q ss_pred cchhhhcC----------------------------------CCCCEEEcCCCCCCCCCCc-------------------
Q 003134 251 IPASISAL----------------------------------TSLTDLRISDLKGSESAFP------------------- 277 (845)
Q Consensus 251 ~p~~~~~l----------------------------------~~L~~L~Ls~n~~~~~~~~------------------- 277 (845)
.|..+..+ ++|+.|++++|.+.+..+.
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 88877665 5788888888876532111
Q ss_pred ---------------------ccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEE
Q 003134 278 ---------------------KLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 336 (845)
Q Consensus 278 ---------------------~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 336 (845)
.+...+|+.|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 329 (455)
T 3v47_A 250 YNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLN 329 (455)
T ss_dssp TTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEE
Confidence 11123799999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCChhhh--cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCccCc
Q 003134 337 LTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPC 398 (845)
Q Consensus 337 L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~~c 398 (845)
|++|++++..|..+. ..|+.|+|++|++++..|..+. .+..++.++.+.|++.+..+-
T Consensus 330 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L~~L~L~~N~l~~~~~~ 389 (455)
T 3v47_A 330 LSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL----GLPNLKELALDTNQLKSVPDG 389 (455)
T ss_dssp CCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT----TCTTCCEEECCSSCCSCCCTT
T ss_pred CCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc----ccccccEEECCCCccccCCHh
Confidence 999999977777763 5899999999999998886662 345677888999999876543
No 15
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-32 Score=317.53 Aligned_cols=297 Identities=18% Similarity=0.201 Sum_probs=261.3
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+ +|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4677778887 5676654 689999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchh
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPAS 254 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 254 (845)
+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 99776677899999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred hhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcC
Q 003134 255 ISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (845)
Q Consensus 255 ~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 333 (845)
|.++++|+.|++++|.+.......+... +|+.|+|++|.+.+.+|..+....+|+.|+|++|+|++..+..|..+++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 9999999999999999988777666655 899999999998888888777777999999999999976667899999999
Q ss_pred EEEccCCcccCCCChhhh--cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCccCcc
Q 003134 334 FMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPCL 399 (845)
Q Consensus 334 ~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~~c~ 399 (845)
.|+|++|++++..+..+. ..|+.|+|++|++++..|..+. .+..++.++.+.|++....+..
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~L~~L~L~~N~l~~~~~~~ 315 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFR----GLNYLRVLNVSGNQLTTLEESV 315 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBT----TCTTCCEEECCSSCCSCCCGGG
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhc----CcccCCEEECCCCcCceeCHhH
Confidence 999999999876665553 4789999999999988776652 3455777888888888765543
No 16
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8e-33 Score=341.10 Aligned_cols=93 Identities=19% Similarity=0.212 Sum_probs=77.9
Q ss_pred ccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCC---------
Q 003134 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSD--------- 370 (845)
Q Consensus 300 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~--------- 370 (845)
..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+..+|+.|||++|++++.+|.
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~ 553 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLD 553 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEE
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEE
Confidence 34667788888888888888888888999999999999999999877777778899999999999988774
Q ss_pred ----CCCCCCCCceeeeeecCCCCCC
Q 003134 371 ----PIECPRGSVNLVESYSSPRNKL 392 (845)
Q Consensus 371 ----~~~c~~~~~~~l~~l~~~~n~~ 392 (845)
||.|+|...++..|+......+
T Consensus 554 l~~Np~~C~c~~~~f~~~~~~~~~~~ 579 (844)
T 3j0a_A 554 ITHNKFICECELSTFINWLNHTNVTI 579 (844)
T ss_dssp EEEECCCCSSSCCSHHHHHHHTTTTT
T ss_pred ecCCCcccccccHHHHHHHHhcCccc
Confidence 7899999999999987655443
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=319.56 Aligned_cols=136 Identities=16% Similarity=0.169 Sum_probs=98.9
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|..+ +|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 467788888888887766778888888888888888888777788777 7888888888887 34544 6788888888
Q ss_pred ecccCCC-CCCcccccCCCccEEEeecCcCcccCChhhhCCCCC--CcEEeecCcC--cccCchhhcC
Q 003134 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL--NDLRISDNNF--SGKIPEFIGK 233 (845)
Q Consensus 171 s~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~ 233 (845)
++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|+|++|++ ++..|..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccc
Confidence 8888876 467778888888888888887764 334555555 6666666666 4455544444
No 18
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.8e-33 Score=303.49 Aligned_cols=160 Identities=27% Similarity=0.526 Sum_probs=144.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
..|+..++||+|+||+||+|++. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46888899999999999999986 59999999998766666678899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
+||+|.+++.. ..+++.++..|+.||+.||+|||+++ ||||||||+||||+.++++||+|||+|+.+..+.
T Consensus 154 ~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 99999999853 25899999999999999999999997 9999999999999999999999999999886544
Q ss_pred ceeeeeeccCC
Q 003134 835 THISTRIAGTM 845 (845)
Q Consensus 835 ~~~~t~~~GT~ 845 (845)
.. .+.++||+
T Consensus 225 ~~-~~~~~GTp 234 (346)
T 4fih_A 225 PR-RKSLVGTP 234 (346)
T ss_dssp CC-BCCCCSCG
T ss_pred Cc-ccccccCc
Confidence 33 34577885
No 19
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.5e-32 Score=326.83 Aligned_cols=293 Identities=18% Similarity=0.216 Sum_probs=240.2
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCC--Cccccccc---ceeEEEecCCCCCCCcccccccccccc
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS--FSPQWASL---QLVELSVMGNRLSGPFPKVLTNITTLK 166 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~--~~~~~~~l---~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 166 (845)
.+++.|++++|.+++..+..|.++++|++|+|++|.++.. ....|..+ +|+.|+|++|++++..|..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 3567777778888777777778888888888887765432 22333333 688888888888888888899999999
Q ss_pred eeEeecccCCCCCC-cccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCc--ccCchhhcCCcccceEEec
Q 003134 167 NLSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQ 243 (845)
Q Consensus 167 ~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls 243 (845)
+|+|++|++++.+| ..|.++++|++|+|++|++++..+..|..+++|++|++++|+++ +.+|..|.++++|++|+|+
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 99999999987666 57888999999999999998888888999999999999999887 5788899999999999999
Q ss_pred CCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCc--------ccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCC
Q 003134 244 GSSLEGPIPASISALTSLTDLRISDLKGSESAFP--------KLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLS 314 (845)
Q Consensus 244 ~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~--------~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 314 (845)
+|++++..+..|.++++|+.|++++|.++..... .+... +|+.|+|++|+|+...+..|.++++|+.|+|+
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 9999988888899999999999999998764221 23333 89999999999996666679999999999999
Q ss_pred CCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh---hcCCceEEeecCCCcCCCCCCCCCCCCC-ceeeeeecCCCC
Q 003134 315 FNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESSDPIECPRGS-VNLVESYSSPRN 390 (845)
Q Consensus 315 ~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~---~~~l~~L~ls~N~l~~~~p~~~~c~~~~-~~~l~~l~~~~n 390 (845)
+|+|++..+..|.++++|+.|+|++|+|++..|..+ +.+++.|++++| ||.|+|.. .++..|+.....
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N--------~~~c~c~~~~~~~~~~~~~~~ 640 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN--------PFDCTCESIAWFVNWINETHT 640 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTC--------CCCBCCCCCSSEECCSSCC--
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCC--------CcccCCccHHHHHHHHHhcCc
Confidence 999998888888999999999999999998776654 468999999999 89999996 899999876554
Q ss_pred CC
Q 003134 391 KL 392 (845)
Q Consensus 391 ~~ 392 (845)
.+
T Consensus 641 ~~ 642 (680)
T 1ziw_A 641 NI 642 (680)
T ss_dssp --
T ss_pred cc
Confidence 43
No 20
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.1e-32 Score=319.02 Aligned_cols=296 Identities=20% Similarity=0.213 Sum_probs=224.4
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|..+ +|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 578899999999998888899999999999999999999999999998 8999999999999 45655 7999999999
Q ss_pred ecccCCC-CCCcccccCCCccEEEeecCcCcccCChhhhCCCCC--CcEEeecCcC--cccCchhhcCCc----------
Q 003134 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL--NDLRISDNNF--SGKIPEFIGKWK---------- 235 (845)
Q Consensus 171 s~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~---------- 235 (845)
++|++++ .+|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++ ++..|..|..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 205 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHP 205 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecC
Confidence 9999996 4568999999999999999999863 34455555 9999999998 777776665543
Q ss_pred -----------------------------------------------------------------------ccceEEecC
Q 003134 236 -----------------------------------------------------------------------KIQKLHIQG 244 (845)
Q Consensus 236 -----------------------------------------------------------------------~L~~L~Ls~ 244 (845)
+|++|++++
T Consensus 206 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~ 285 (562)
T 3a79_B 206 NSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285 (562)
T ss_dssp SSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEE
T ss_pred ccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEec
Confidence 677788888
Q ss_pred CcCCCCcchhh-----------------------------------------------------hcCCCCCEEEcCCCCC
Q 003134 245 SSLEGPIPASI-----------------------------------------------------SALTSLTDLRISDLKG 271 (845)
Q Consensus 245 N~l~g~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~n~~ 271 (845)
|+++|.+|..+ ..+++|+.|++++|.+
T Consensus 286 n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l 365 (562)
T 3a79_B 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVF 365 (562)
T ss_dssp EEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCC
T ss_pred cEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcc
Confidence 88887777655 5566777777777777
Q ss_pred CCCCCcccccC-CccEEEccCCcCccc--CcccccCCCCcCEEeCCCCCCCCCCch-hhhcCCCcCEEEccCCcccCCCC
Q 003134 272 SESAFPKLDKM-NLKTLILTKCLIHGE--IPDYIGDMTKLKNIDLSFNNLTGGIPT-TFEKLAKTNFMYLTGNKLTGPVP 347 (845)
Q Consensus 272 ~~~~~~~l~~~-~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L~~N~l~g~ip 347 (845)
++..+..+... +|+.|+|++|++++. +|..|.++++|+.|+|++|++++.+|. .+..+++|++|+|++|++++.+|
T Consensus 366 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 445 (562)
T 3a79_B 366 TDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVF 445 (562)
T ss_dssp CTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGG
T ss_pred ccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchh
Confidence 76555555444 677777777777763 345677777777777777777764443 46677777777777777777666
Q ss_pred hhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCccCc
Q 003134 348 KYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPC 398 (845)
Q Consensus 348 ~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~~c 398 (845)
..+...|+.|+|++|+++. +|..+. .+..++.++.+.|++......
T Consensus 446 ~~l~~~L~~L~L~~N~l~~-ip~~~~----~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 446 RCLPPKVKVLDLHNNRIMS-IPKDVT----HLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp SSCCTTCSEEECCSSCCCC-CCTTTT----SSCCCSEEECCSSCCCCCCTT
T ss_pred hhhcCcCCEEECCCCcCcc-cChhhc----CCCCCCEEECCCCCCCCCCHH
Confidence 6665677778888887773 332221 334566677777777765443
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.98 E-value=3.6e-32 Score=317.11 Aligned_cols=284 Identities=20% Similarity=0.246 Sum_probs=199.3
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCC-CcccccccccccceeE
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSG-PFPKVLTNITTLKNLS 169 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 169 (845)
.+++.|+|++|.+++..|..|+++++|++|+|++|+|+.+ |.. .+ +|++|+|++|+|++ .+|..|+++++|++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKI-SCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEE-ECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeec-Ccc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 4788999999999998899999999999999999999854 444 45 89999999999987 4788899899888888
Q ss_pred eecccCCC-------------------------CCCcccccCC-------------------------------------
Q 003134 170 IEGNLFTG-------------------------SIPPDIRKLI------------------------------------- 187 (845)
Q Consensus 170 Ls~N~l~g-------------------------~~p~~~~~l~------------------------------------- 187 (845)
|++|+|++ ..|..|..+.
T Consensus 122 L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 201 (520)
T 2z7x_B 122 LSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVL 201 (520)
T ss_dssp EEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECC
T ss_pred ecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccc
Confidence 88887753 2333333321
Q ss_pred ----------------------------------------------CccEEEeecCcCcccCChhh--------------
Q 003134 188 ----------------------------------------------NLQKLILSSNSFTGELPAEL-------------- 207 (845)
Q Consensus 188 ----------------------------------------------~L~~L~Ls~N~l~g~~p~~~-------------- 207 (845)
+|++|++++|+++|.+|..+
T Consensus 202 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l 281 (520)
T 2z7x_B 202 EDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIH 281 (520)
T ss_dssp STTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEE
T ss_pred cccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEec
Confidence 45555666666665555443
Q ss_pred ---------------------------------------hCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 208 ---------------------------------------TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 208 ---------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
..+++|++|+|++|++++.+|..++.+++|++|+|++|+++
T Consensus 282 ~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 361 (520)
T 2z7x_B 282 QVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361 (520)
T ss_dssp EEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCC
T ss_pred cccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccC
Confidence 45566666677777776666666666777777777777776
Q ss_pred C--CcchhhhcCCCCCEEEcCCCCCCC-CCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCch
Q 003134 249 G--PIPASISALTSLTDLRISDLKGSE-SAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 324 (845)
Q Consensus 249 g--~~p~~~~~l~~L~~L~Ls~n~~~~-~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 324 (845)
+ .+|..++.+++|+.|++++|.+.. .+...+... +|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|.
T Consensus 362 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~ 438 (520)
T 2z7x_B 362 ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPK 438 (520)
T ss_dssp BHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCG
T ss_pred ccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccch
Confidence 5 445666677777777777777665 333323332 677777777777766666554 67777777777777 6666
Q ss_pred hhhcCCCcCEEEccCCcccCCCChh-h--hcCCceEEeecCCCcCCCCCCCCCCCCCcee-eeeecCCCC
Q 003134 325 TFEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDISLNNFTWESSDPIECPRGSVNL-VESYSSPRN 390 (845)
Q Consensus 325 ~~~~l~~L~~L~L~~N~l~g~ip~~-~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~-l~~l~~~~n 390 (845)
.+..+++|++|+|++|+|+ .+|.. + ...|+.|++++| +|.|+|...++ ..|+.....
T Consensus 439 ~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N--------~~~c~c~~~~~~~~~~~~~~~ 499 (520)
T 2z7x_B 439 QVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN--------PWDCSCPRIDYLSRWLNKNSQ 499 (520)
T ss_dssp GGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS--------CBCCCHHHHHHHHHHHHHTTT
T ss_pred hhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC--------CCcccCCchHHHHHHHHhccc
Confidence 6667777777777777777 45554 3 236777777777 67788887777 777765443
No 22
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.98 E-value=2.6e-33 Score=301.55 Aligned_cols=167 Identities=31% Similarity=0.531 Sum_probs=140.9
Q ss_pred cCCCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|...+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..||
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777899999999999999864 378899999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCc--------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEE
Q 003134 750 VYEYMKNNCLSRAIFGKDT--------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl 821 (845)
|||||++|+|.++++.... .....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 9999999999999975431 12347999999999999999999999986 999999999999999999999
Q ss_pred EeeccceecCCCCce-eeeeeccCC
Q 003134 822 SDFGLAKLYEEDKTH-ISTRIAGTM 845 (845)
Q Consensus 822 ~DFGla~~~~~~~~~-~~t~~~GT~ 845 (845)
+|||+|+........ ......||+
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~ 194 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPI 194 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECG
T ss_pred CCcccceecCCCCceeecCceecCh
Confidence 999999987544332 222345653
No 23
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.98 E-value=6.3e-33 Score=302.62 Aligned_cols=167 Identities=29% Similarity=0.498 Sum_probs=134.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..||
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 34566789999999999999864 378999999987766667889999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcE
Q 003134 750 VYEYMKNNCLSRAIFGKDTE----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 819 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~ 819 (845)
|||||++|+|.++++..... ...+++|.++++|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 99999999999999764321 1246999999999999999999999986 9999999999999999999
Q ss_pred EEEeeccceecCCCCc-eeeeeeccCC
Q 003134 820 KISDFGLAKLYEEDKT-HISTRIAGTM 845 (845)
Q Consensus 820 kl~DFGla~~~~~~~~-~~~t~~~GT~ 845 (845)
||+|||+|+....... ...+..+||+
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~ 224 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPI 224 (329)
T ss_dssp EECCCC----------------CCCCG
T ss_pred EEcccccceeccCCCcceecCcccccc
Confidence 9999999998754332 2334566764
No 24
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.98 E-value=1e-32 Score=296.56 Aligned_cols=162 Identities=28% Similarity=0.411 Sum_probs=143.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||+||+|+.. +++.||||++.+. .....+.+.+|+++|++++|||||++++++.+++.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999975 5899999999754 2344678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||++||+|.+++... ..+++.++..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999543 36899999999999999999999997 9999999999999999999999999999986
Q ss_pred CCCc-eeeeeeccCC
Q 003134 832 EDKT-HISTRIAGTM 845 (845)
Q Consensus 832 ~~~~-~~~t~~~GT~ 845 (845)
.+.. .....++||+
T Consensus 184 ~~~~~~~~~~~~GTp 198 (311)
T 4aw0_A 184 PESKQARANSFVGTA 198 (311)
T ss_dssp TTTTCCCBCCCCSCG
T ss_pred CCCCcccccCcccCc
Confidence 5433 3345678885
No 25
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.98 E-value=6.1e-32 Score=317.18 Aligned_cols=296 Identities=20% Similarity=0.203 Sum_probs=219.9
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+ +|++|+|++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 478999999999999889999999999999999999999999999998 9999999999999988888999999999999
Q ss_pred ecccCCC-CCCcccccCCCccEEEeecCcCcccCC-hhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTG-SIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|++++ ..|..|.++++|++|+|++|++.+.+| ..|.++++|++|+|++|++++..|..+..+++|++|+++.|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 9999996 357789999999999999999555555 67999999999999999999888888776555555555444443
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCC-------------------------------------------------------
Q 003134 249 GPIPASISALTSLTDLRISDLKGSE------------------------------------------------------- 273 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~------------------------------------------------------- 273 (845)
...+..+..+++|+.|++++|.+.+
T Consensus 186 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~ 265 (549)
T 2z81_A 186 FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNG 265 (549)
T ss_dssp THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEEC
T ss_pred ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccc
Confidence 2211122233444444444433332
Q ss_pred -----------------------------------------------------------CCCcccc-cCCccEEEccCCc
Q 003134 274 -----------------------------------------------------------SAFPKLD-KMNLKTLILTKCL 293 (845)
Q Consensus 274 -----------------------------------------------------------~~~~~l~-~~~L~~L~Ls~N~ 293 (845)
.+...+. ..+|+.|+|++|+
T Consensus 266 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 266 LGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp CSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSC
T ss_pred cccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCc
Confidence 1111111 2378888888888
Q ss_pred CcccCcc---cccCCCCcCEEeCCCCCCCCCCc--hhhhcCCCcCEEEccCCcccCCCChhhh--cCCceEEeecCCCcC
Q 003134 294 IHGEIPD---YIGDMTKLKNIDLSFNNLTGGIP--TTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTW 366 (845)
Q Consensus 294 l~~~~p~---~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~ 366 (845)
+++.+|. .++.+++|+.|+|++|+|++..+ ..+..+++|++|+|++|+++ .+|..+. ..|+.|++++|.++.
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 8887643 36778888888888888885533 45788888888888888888 5666553 477888888887764
Q ss_pred CCCCCCCCCCCCceeeeeecCCCCCCCCc
Q 003134 367 ESSDPIECPRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 367 ~~p~~~~c~~~~~~~l~~l~~~~n~~~~~ 395 (845)
... .+ ...++.++.+.|++++.
T Consensus 425 l~~-~~------~~~L~~L~Ls~N~l~~~ 446 (549)
T 2z81_A 425 VKT-CI------PQTLEVLDVSNNNLDSF 446 (549)
T ss_dssp CCT-TS------CTTCSEEECCSSCCSCC
T ss_pred ccc-hh------cCCceEEECCCCChhhh
Confidence 322 11 12355666667666653
No 26
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.98 E-value=7.4e-32 Score=320.43 Aligned_cols=300 Identities=16% Similarity=0.146 Sum_probs=241.9
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
+.+++.|+|++|.+++..|..|+++++|++|+|++|+++++.|..|..+ +|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 3578999999999999889999999999999999999999999999999 999999999999999999999999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccc--eEEecCCcC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ--KLHIQGSSL 247 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~Ls~N~l 247 (845)
|++|++++..|..|.++++|++|+|++|++++..+..+.++++|++|+|++|++++..|..|+.+++|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999987788899999999999999999975545566699999999999999988899999999999 889999998
Q ss_pred CCCcchhhhcC---------------------------------------------------CCCCEEEcCCCCCCCCCC
Q 003134 248 EGPIPASISAL---------------------------------------------------TSLTDLRISDLKGSESAF 276 (845)
Q Consensus 248 ~g~~p~~~~~l---------------------------------------------------~~L~~L~Ls~n~~~~~~~ 276 (845)
++..|..+... .+|+.|++++|.+.....
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87766554321 056667777777776666
Q ss_pred cccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh---hc
Q 003134 277 PKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI---FN 352 (845)
Q Consensus 277 ~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~---~~ 352 (845)
..+... +|++|+|++|+++ .+|..+.++++|++|+|++|++++..|..+.++++|++|++++|.+.+.+|... ..
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 655554 7888888888877 667777778888888888888887777778888888888888888777776553 24
Q ss_pred CCceEEeecCCCcCCC--CCCCCCCCCCceeeeeecCCCCCCCCc
Q 003134 353 SNKNVDISLNNFTWES--SDPIECPRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 353 ~l~~L~ls~N~l~~~~--p~~~~c~~~~~~~l~~l~~~~n~~~~~ 395 (845)
.|+.|++++|.+++.. |..+ ..+..++.++.+.|++...
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~----~~l~~L~~L~l~~n~l~~~ 391 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQL----RNLSHLQSLNLSYNEPLSL 391 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTT----TTCTTCCEEECCSCSCEEE
T ss_pred cCCEEECCCCccccccCcchhc----ccCCCCCEEECCCCcCCcC
Confidence 6777888888777654 3222 2233455666666666544
No 27
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.98 E-value=5.6e-33 Score=303.45 Aligned_cols=163 Identities=25% Similarity=0.423 Sum_probs=136.3
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+++.+|+++|++++|||||++++++.+++.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57999999999999999999975 59999999997542 2345689999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
||+||+|.+++.... ...+++.+++.|+.||+.||+|||+++ ||||||||+||||++++.+||+|||+|+.+..
T Consensus 104 y~~gg~L~~~i~~~~---~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQK---GVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCcHHHHHHHcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999996532 235789999999999999999999997 99999999999999999999999999998754
Q ss_pred CCceeeeeeccCC
Q 003134 833 DKTHISTRIAGTM 845 (845)
Q Consensus 833 ~~~~~~t~~~GT~ 845 (845)
... ..+..+||+
T Consensus 178 ~~~-~~~~~~GT~ 189 (350)
T 4b9d_A 178 TVE-LARACIGTP 189 (350)
T ss_dssp HHH-HHHHHHSCC
T ss_pred Ccc-cccccCCCc
Confidence 322 234467875
No 28
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=5.8e-32 Score=303.62 Aligned_cols=286 Identities=16% Similarity=0.137 Sum_probs=230.5
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.+++.++.++...+..|..+++|++|+|++|.+++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 467889999999886555568999999999999999999988899988 8999999999999999999999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccc------------
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ------------ 238 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~------------ 238 (845)
++|+++...+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.. +..+++|+
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccccc
Confidence 999999555555789999999999999999888888999999999999999999653 33344444
Q ss_pred -------eEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCE
Q 003134 239 -------KLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKN 310 (845)
Q Consensus 239 -------~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 310 (845)
+|++++|+++.. |. ...++|+.|++++|.+++. +.+.. .+|+.|+|++|.+++..|..|..+++|++
T Consensus 202 ~~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 276 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 276 (390)
T ss_dssp ECCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred CCCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCE
Confidence 444444544432 22 1235788888888888765 33333 38999999999999988999999999999
Q ss_pred EeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 311 IDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 311 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+ +..|+.|++++|+++.... .....++.++..
T Consensus 277 L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~-------~~~~~L~~L~l~ 347 (390)
T 3o6n_A 277 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL-------STHHTLKNLTLS 347 (390)
T ss_dssp EECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-------CTTCCCSEEECC
T ss_pred EECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCc-------hhhccCCEEEcC
Confidence 9999999985 5667788899999999999998 456555 4689999999999886532 233456677788
Q ss_pred CCCCCC
Q 003134 389 RNKLDK 394 (845)
Q Consensus 389 ~n~~~~ 394 (845)
.|++.+
T Consensus 348 ~N~~~~ 353 (390)
T 3o6n_A 348 HNDWDC 353 (390)
T ss_dssp SSCEEH
T ss_pred CCCccc
Confidence 887765
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.98 E-value=2.5e-32 Score=305.11 Aligned_cols=160 Identities=27% Similarity=0.528 Sum_probs=144.3
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
+.|+..++||+|+||.||+|++. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56889999999999999999986 59999999998766666778999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
+||+|.+++... .+++.++..|+.||+.||+|||+++ ||||||||+||||+.+|.+||+|||+|+.+..+.
T Consensus 231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999998532 5899999999999999999999997 9999999999999999999999999999886544
Q ss_pred ceeeeeeccCC
Q 003134 835 THISTRIAGTM 845 (845)
Q Consensus 835 ~~~~t~~~GT~ 845 (845)
.. .+.++||+
T Consensus 302 ~~-~~~~~GTp 311 (423)
T 4fie_A 302 PR-RKSLVGTP 311 (423)
T ss_dssp CC-BCCCEECT
T ss_pred cc-ccccccCc
Confidence 33 34577885
No 30
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=7.8e-32 Score=319.62 Aligned_cols=287 Identities=16% Similarity=0.117 Sum_probs=233.2
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.+++.++.++...+..|.++++|++|+|++|.|++..|..|..+ +|++|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 356788999999987666678999999999999999999999899988 8999999999999999999999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC-
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG- 249 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g- 249 (845)
++|.|++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+ +.+++|+.|++++|.+++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL---SLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG---GGCTTCSEEECCSSCCSEE
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh---hhhhhhhhhhcccCccccc
Confidence 9999997666667999999999999999999888899999999999999999997643 344555555555554443
Q ss_pred ------------------CcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCE
Q 003134 250 ------------------PIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKN 310 (845)
Q Consensus 250 ------------------~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 310 (845)
..+.. .++|+.|+|++|.+++. ..+.. .+|+.|+|++|.|++.+|..|..+++|+.
T Consensus 208 ~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 282 (597)
T 3oja_B 208 AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLER 282 (597)
T ss_dssp ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCE
T ss_pred cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCE
Confidence 22111 24788888888888764 33333 38999999999999999999999999999
Q ss_pred EeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 311 IDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 311 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
|+|++|+|++ +|..+..+++|+.|+|++|+++ .+|..+ +..|+.|+|++|.+++... .....+..++.+
T Consensus 283 L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~-------~~~~~L~~L~l~ 353 (597)
T 3oja_B 283 LYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL-------STHHTLKNLTLS 353 (597)
T ss_dssp EECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC-------CTTCCCSEEECC
T ss_pred EECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh-------hhcCCCCEEEee
Confidence 9999999985 5777788999999999999998 567666 4589999999999886632 233456677788
Q ss_pred CCCCCCc
Q 003134 389 RNKLDKV 395 (845)
Q Consensus 389 ~n~~~~~ 395 (845)
.|.+.+.
T Consensus 354 ~N~~~~~ 360 (597)
T 3oja_B 354 HNDWDCN 360 (597)
T ss_dssp SSCEEHH
T ss_pred CCCCCCh
Confidence 8877643
No 31
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=2e-31 Score=314.04 Aligned_cols=284 Identities=18% Similarity=0.182 Sum_probs=206.3
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCC-ccccccccccccee
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP-FPKVLTNITTLKNL 168 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 168 (845)
..+++.|+|++|.+++..|..|.++++|++|+|++|+|+.+. .. .+ +|++|+|++|++++. +|..|+++++|++|
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp-~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L 151 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNIS-CC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFL 151 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEEC-SC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEE
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccC-cc--ccccCCEEECCCCCccccCchHhhcccCcccEE
Confidence 357899999999999988999999999999999999999544 33 45 899999999999874 56889999999999
Q ss_pred EeecccCCCC-------------------------CCcccccCC------------------------------------
Q 003134 169 SIEGNLFTGS-------------------------IPPDIRKLI------------------------------------ 187 (845)
Q Consensus 169 ~Ls~N~l~g~-------------------------~p~~~~~l~------------------------------------ 187 (845)
+|++|++++. .|..|..+.
T Consensus 152 ~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 231 (562)
T 3a79_B 152 GLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLN 231 (562)
T ss_dssp EEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECC
T ss_pred ecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEeccccc
Confidence 9888887642 232332221
Q ss_pred ---------------------------------------------CccEEEeecCcCcccCChhh---------------
Q 003134 188 ---------------------------------------------NLQKLILSSNSFTGELPAEL--------------- 207 (845)
Q Consensus 188 ---------------------------------------------~L~~L~Ls~N~l~g~~p~~~--------------- 207 (845)
+|++|++++|+++|.+|..+
T Consensus 232 ~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~ 311 (562)
T 3a79_B 232 DENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEH 311 (562)
T ss_dssp STTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEE
T ss_pred ccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhh
Confidence 45555555555555555543
Q ss_pred --------------------------------------hCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 208 --------------------------------------TKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 208 --------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
..+++|++|+|++|++++.+|..+.++++|++|+|++|++++
T Consensus 312 ~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 391 (562)
T 3a79_B 312 VKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKN 391 (562)
T ss_dssp EEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCB
T ss_pred cccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCC
Confidence 456677777777777777677777777777777777777776
Q ss_pred --CcchhhhcCCCCCEEEcCCCCCCC-CCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchh
Q 003134 250 --PIPASISALTSLTDLRISDLKGSE-SAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTT 325 (845)
Q Consensus 250 --~~p~~~~~l~~L~~L~Ls~n~~~~-~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 325 (845)
.+|..+.++++|+.|++++|.+.. .+...+... +|+.|+|++|+|++.+|..+. ++|+.|+|++|+|+ .+|..
T Consensus 392 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 392 FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp TTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred cccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 335567777777777777777766 443333333 777777777777776666554 67888888888887 56666
Q ss_pred hhcCCCcCEEEccCCcccCCCChh-h--hcCCceEEeecCCCcCCCCCCCCCCCCCceeee-eecCCC
Q 003134 326 FEKLAKTNFMYLTGNKLTGPVPKY-I--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVE-SYSSPR 389 (845)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~g~ip~~-~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~-~l~~~~ 389 (845)
+..+++|++|+|++|+|+ .+|.. + ...++.|++++| ||.|+|...+++. |.....
T Consensus 469 ~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N--------~~~c~c~~~~~~~~~~~~~~ 527 (562)
T 3a79_B 469 VTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN--------PWDCTCPGIRYLSEWINKHS 527 (562)
T ss_dssp TTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC--------CBCCCHHHHHHHHHHHHHTT
T ss_pred hcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC--------CcCCCcchHHHHHHHHHhcC
Confidence 668888888888888888 45554 3 346778888888 7889998888866 765444
No 32
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=293.44 Aligned_cols=161 Identities=27% Similarity=0.492 Sum_probs=132.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.+++...++||+|+||+||+|++.+ .||||+++... ....++|.+|+++|++++|||||+++|++. ++.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEE
Confidence 3567788999999999999998753 58999987542 334578999999999999999999999875 456899999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
||++|+|.++++... ..++|.++++|+.|||+||+|||+++ ||||||||+|||+++++++||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~~----~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999997543 36999999999999999999999986 99999999999999999999999999998754
Q ss_pred CC-ceeeeeeccCC
Q 003134 833 DK-THISTRIAGTM 845 (845)
Q Consensus 833 ~~-~~~~t~~~GT~ 845 (845)
.. ....+..+||+
T Consensus 185 ~~~~~~~~~~~GT~ 198 (307)
T 3omv_A 185 WSGSQQVEQPTGSV 198 (307)
T ss_dssp ---------CCCCT
T ss_pred CCcceeecccccCC
Confidence 33 23344567885
No 33
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=327.95 Aligned_cols=301 Identities=15% Similarity=0.169 Sum_probs=250.7
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCC-ccccccc-ceeEEEecCCCCCCCccccccccccccee
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSF-SPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 168 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~-~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 168 (845)
+.+++.|+|++|.+++..|..|.++++|++|+|++|.+.+.+ |..|..+ +|++|+|++|+|++..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 457899999999999999999999999999999999666555 7889998 99999999999999999999999999999
Q ss_pred EeecccCCCCCCcc--cccCCCccEEEeecCcCcccCC-hhhhCCCCCCcEEeecCcCcccCchhhcCC--cccceEEec
Q 003134 169 SIEGNLFTGSIPPD--IRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKW--KKIQKLHIQ 243 (845)
Q Consensus 169 ~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls 243 (845)
+|++|++++.+|.. |.++++|++|+|++|++++..+ ..|+++++|++|+|++|++++..|..|..+ ++|+.|+|+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877765 9999999999999999998765 579999999999999999999999998887 889999999
Q ss_pred CCcCCCCcchhhhcCCC------CCEEEcCCCCCCCCCCccc--------------------------------------
Q 003134 244 GSSLEGPIPASISALTS------LTDLRISDLKGSESAFPKL-------------------------------------- 279 (845)
Q Consensus 244 ~N~l~g~~p~~~~~l~~------L~~L~Ls~n~~~~~~~~~l-------------------------------------- 279 (845)
+|.+.+..|..++.+.+ |+.|++++|.++...+..+
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99999888887777665 8899998886654322111
Q ss_pred -ccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhh--cCCce
Q 003134 280 -DKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKN 356 (845)
Q Consensus 280 -~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~l~~ 356 (845)
...+|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+. ..|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 113688888888888888888888888888888888888888888888888888888888888877776663 47888
Q ss_pred EEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCc
Q 003134 357 VDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 357 L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~ 395 (845)
|++++|++++..+..+ ..+.-++.++.+.|.+...
T Consensus 343 L~L~~N~i~~~~~~~~----~~l~~L~~L~Ls~N~l~~i 377 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTF----KFLEKLQTLDLRDNALTTI 377 (844)
T ss_dssp EECCSCCCCCCCSSCS----CSCCCCCEEEEETCCSCCC
T ss_pred EECCCCCCCccChhhh----cCCCCCCEEECCCCCCCcc
Confidence 8888888877766555 2234455666666666543
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=2.3e-31 Score=324.21 Aligned_cols=262 Identities=20% Similarity=0.270 Sum_probs=181.2
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCc-ccC-CCccccccc--------ceeEEEecCCCCCCCccc--cc
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC-LTG-SFSPQWASL--------QLVELSVMGNRLSGPFPK--VL 159 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~-l~~-~~~~~~~~l--------~L~~L~Ls~N~l~~~~p~--~~ 159 (845)
.+++.|+|++|++.|.+|..|++|++|++|+|++|+ +++ .+|..+..+ +|++|+|++|+|+ .+|. .|
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 478999999999999999999999999999999998 998 788776654 6999999999999 7888 89
Q ss_pred ccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCC-CCcEEeecCcCcccCchhhcCCcc--
Q 003134 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTN-LNDLRISDNNFSGKIPEFIGKWKK-- 236 (845)
Q Consensus 160 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~-- 236 (845)
+++++|+.|+|++|+|+ .+| .|+++++|++|+|++|+++ .+|..+.++++ |++|+|++|+|+ .+|..+..++.
T Consensus 570 ~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 99999999999999999 888 8999999999999999999 88888999998 999999999998 77877766543
Q ss_pred cceEEecCCcCCCCcchh---hh--cCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccc-cC-----
Q 003134 237 IQKLHIQGSSLEGPIPAS---IS--ALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYI-GD----- 304 (845)
Q Consensus 237 L~~L~Ls~N~l~g~~p~~---~~--~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~-~~----- 304 (845)
|+.|+|++|++++.+|.. +. .+.+|+.|+|++|.+...+...+.. .+|+.|+|++|+|+ .+|..+ ..
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l 724 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNY 724 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCC
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccc
Confidence 777777777776655422 11 1224555555555555333322211 24455555555544 222221 11
Q ss_pred --CCCcCEEeCCCCCCCCCCchhhh--cCCCcCEEEccCCcccCCCChhhh--cCCceEEeec
Q 003134 305 --MTKLKNIDLSFNNLTGGIPTTFE--KLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISL 361 (845)
Q Consensus 305 --l~~L~~L~Ls~N~l~g~~p~~~~--~l~~L~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~ 361 (845)
+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+. .+|+.|+|++
T Consensus 725 ~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 725 KNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp TTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred cccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 114455555555544 3444443 44455555555555544 343332 2444444433
No 35
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.97 E-value=2.5e-32 Score=295.08 Aligned_cols=165 Identities=29% Similarity=0.438 Sum_probs=138.0
Q ss_pred CCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 678 FDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 678 y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
++..++||+|+||+||+|++. +++.||||+++.... ...++|.+|+++|++++|||||+++|+|.+++..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 455788999999999999863 467899999976533 3467899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcE
Q 003134 751 YEYMKNNCLSRAIFGKDT-----------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 819 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~ 819 (845)
||||++|+|.++|+.... .....++|.++++|+.|||+||+|||+++ ||||||||+|||+++++++
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCE
Confidence 999999999999965421 11346999999999999999999999986 9999999999999999999
Q ss_pred EEEeeccceecCCCCc-eeeeeeccCC
Q 003134 820 KISDFGLAKLYEEDKT-HISTRIAGTM 845 (845)
Q Consensus 820 kl~DFGla~~~~~~~~-~~~t~~~GT~ 845 (845)
||+|||+|+....... ...+...||+
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~ 211 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPI 211 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCG
T ss_pred EECCcccceeccCCCceeEecccccCC
Confidence 9999999997754322 2233455663
No 36
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.2e-31 Score=305.06 Aligned_cols=257 Identities=15% Similarity=0.167 Sum_probs=194.7
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.++..+.+++ .+|..+. ++|++|+|++|+|+++.+..|..+ +|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4566677777 4666554 678888888888888877777777 77778887777777777777777777777777777
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeec-CcCcccCchhhcCCcccceEEecCCcCCCCcch
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
|++..+..|.++++|++|+|++|+|+...+..|.++++|++|+|++ |.++...+..|.++++|++|+|++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 7766666677777777777777777766666677777777777777 444444444577777777777777777643 2
Q ss_pred hhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcC
Q 003134 254 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (845)
Q Consensus 254 ~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 333 (845)
.+..++ +|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+
T Consensus 213 ~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 269 (452)
T 3zyi_A 213 NLTPLV-----------------------GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV 269 (452)
T ss_dssp CCTTCT-----------------------TCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred cccccc-----------------------cccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC
Confidence 233333 566777888888888888899999999999999999988888899999999
Q ss_pred EEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 334 FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 334 ~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
.|+|++|+|++..+..+ ..+|+.|+|++| ||.|+|...++..|+...
T Consensus 270 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N--------p~~CdC~~~~l~~~l~~~ 318 (452)
T 3zyi_A 270 ELNLAHNNLSSLPHDLFTPLRYLVELHLHHN--------PWNCDCDILWLAWWLREY 318 (452)
T ss_dssp EEECCSSCCSCCCTTSSTTCTTCCEEECCSS--------CEECSTTTHHHHHHHHHH
T ss_pred EEECCCCcCCccChHHhccccCCCEEEccCC--------CcCCCCCchHHHHHHHHh
Confidence 99999999986555544 347889999999 899999999999888653
No 37
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=311.42 Aligned_cols=302 Identities=18% Similarity=0.166 Sum_probs=188.4
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 356667777777776666667777777777777777776666666666 6777777777776666666666666666666
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcc-cCChhhhCCCCCCcEEeecCcCcccCchhhcCC---------------
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG-ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKW--------------- 234 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--------------- 234 (845)
++|++++..+..|+++++|++|+|++|++++ .+|..|.++++|++|++++|++++..|..++.+
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 6666665444456666666666666666665 346666666666666666666554433322222
Q ss_pred --------------------------------------------------------------------------------
Q 003134 235 -------------------------------------------------------------------------------- 234 (845)
Q Consensus 235 -------------------------------------------------------------------------------- 234 (845)
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence
Q ss_pred --------------cccceEEecCCc------------------------------------------------------
Q 003134 235 --------------KKIQKLHIQGSS------------------------------------------------------ 246 (845)
Q Consensus 235 --------------~~L~~L~Ls~N~------------------------------------------------------ 246 (845)
++|++|++++|.
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 347 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCT
T ss_pred hhhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCC
Confidence 222233332222
Q ss_pred -----------CCCCc--chhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCc-ccccCCCCcCEEe
Q 003134 247 -----------LEGPI--PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP-DYIGDMTKLKNID 312 (845)
Q Consensus 247 -----------l~g~~--p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 312 (845)
+++.. |..+.++++|+.|++++|.+...+.......+|+.|++++|.+++..| ..|.++++|++|+
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 427 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEe
Confidence 22211 233333444444444444433332221122267777777777776655 4577778888888
Q ss_pred CCCCCCCCCCchhhhcCCCcCEEEccCCccc-CCCChhhh--cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCC
Q 003134 313 LSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT-GPVPKYIF--NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPR 389 (845)
Q Consensus 313 Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~-g~ip~~~~--~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~ 389 (845)
|++|++++..|..|.++++|++|+|++|+++ +.+|..+. ..|+.|++++|++++..|..+. .+..++.++.+.
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~l~~ 503 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN----SLSSLQVLNMAS 503 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT----TCTTCCEEECCS
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh----cccCCCEEeCCC
Confidence 8888888777778888888888888888887 56776653 4788888888888877775552 234466677777
Q ss_pred CCCCCccC
Q 003134 390 NKLDKVHP 397 (845)
Q Consensus 390 n~~~~~~~ 397 (845)
|++.+..+
T Consensus 504 n~l~~~~~ 511 (570)
T 2z63_A 504 NQLKSVPD 511 (570)
T ss_dssp SCCSCCCT
T ss_pred CcCCCCCH
Confidence 77776544
No 38
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.6e-31 Score=313.15 Aligned_cols=178 Identities=15% Similarity=0.153 Sum_probs=97.8
Q ss_pred CCCCcEEeecCcCcccC--chhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCC-cccccC-CccE
Q 003134 211 TNLNDLRISDNNFSGKI--PEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAF-PKLDKM-NLKT 286 (845)
Q Consensus 211 ~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~-~~l~~~-~L~~ 286 (845)
++|++|++++|++++.. |..+..+++|++|++++|++.+..+. +..+++|+.|++++|.+....+ ..+... +|++
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 34444555555554332 45566677777777777777654443 6666666666666666654433 222222 5555
Q ss_pred EEccCCcCcccCcccccCCCCcCEEeCCCCCCC-CCCchhhhcCCCcCEEEccCCcccCCCChhhh--cCCceEEeecCC
Q 003134 287 LILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNN 363 (845)
Q Consensus 287 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~ 363 (845)
|+|++|.+++..|..|.++++|+.|+|++|+++ +.+|..|..+++|++|+|++|++++..|..+. .+|+.|++++|+
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 505 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQ 505 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCc
Confidence 555555555555555555555555555555554 34555555555555555555555554454442 345555555555
Q ss_pred CcCCCCC----------------CCCCCCCCceee-eeecCCC
Q 003134 364 FTWESSD----------------PIECPRGSVNLV-ESYSSPR 389 (845)
Q Consensus 364 l~~~~p~----------------~~~c~~~~~~~l-~~l~~~~ 389 (845)
+++.+|. +|.|+|...+++ .|+....
T Consensus 506 l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~ 548 (570)
T 2z63_A 506 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS 548 (570)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTG
T ss_pred CCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcc
Confidence 5554432 455556555555 5555443
No 39
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=8.4e-32 Score=298.18 Aligned_cols=266 Identities=18% Similarity=0.187 Sum_probs=134.9
Q ss_pred CCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEee
Q 003134 117 YLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILS 195 (845)
Q Consensus 117 ~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 195 (845)
+|++|+|++|++++..+..+..+ +|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 45555555555555444444444 45555555555554444455555555555555555553322234555555555555
Q ss_pred cCcCcccCC-hhhhCCCCCCcEEeecC-cCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCC
Q 003134 196 SNSFTGELP-AELTKLTNLNDLRISDN-NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSE 273 (845)
Q Consensus 196 ~N~l~g~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~ 273 (845)
+|++++..+ ..|.++++|++|++++| .+++..+..|.++++|++|++++|++++..|..+.++++|+.|++++|.+..
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 555552222 24455555555555555 2444444445555555555555555555445555555555555555555433
Q ss_pred CCCcccc-cCCccEEEccCCcCcccCccccc---CCCCcCEEeCCCCCCCC----CCchhhhcCCCcCEEEccCCcccCC
Q 003134 274 SAFPKLD-KMNLKTLILTKCLIHGEIPDYIG---DMTKLKNIDLSFNNLTG----GIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 274 ~~~~~l~-~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
.+...+. ..+|+.|+|++|.+++..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~ 291 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-S 291 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-C
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-c
Confidence 3222222 12455555555555554433322 24455566666666654 34555666666666666666666 4
Q ss_pred CChhhh---cCCceEEeecCCCcCCCCCCCCCCCC-CceeeeeecCCCCC
Q 003134 346 VPKYIF---NSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSSPRNK 391 (845)
Q Consensus 346 ip~~~~---~~l~~L~ls~N~l~~~~p~~~~c~~~-~~~~l~~l~~~~n~ 391 (845)
+|..++ .+|+.|+|++| +|.|+|. ..++..|+......
T Consensus 292 i~~~~~~~l~~L~~L~L~~N--------~~~~~~~~l~~l~~~~~~~~~~ 333 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTN--------PWDCSCPRIDYLSRWLNKNSQK 333 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSS--------CBCCCHHHHHHHHHHHHHTTTT
T ss_pred cCHHHHhcCCCCCEEEeeCC--------CccCcCCCcHHHHHHHHhcccc
Confidence 554432 35666666666 5667775 34455666554433
No 40
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.8e-31 Score=301.96 Aligned_cols=257 Identities=17% Similarity=0.183 Sum_probs=199.6
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.++..+.+++ .+|..+. ++|+.|+|++|+|+++.+..|..+ +|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 5677777777 5676665 688999999999988888888887 78888888888887777888888888888888888
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeec-CcCcccCchhhcCCcccceEEecCCcCCCCcch
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
|++..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++ |.++...+..|.++++|++|+|++|+++. +|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 8866666788888888888888888866666788888888888887 44554444567778888888888887773 23
Q ss_pred hhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcC
Q 003134 254 SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (845)
Q Consensus 254 ~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 333 (845)
.+..++ +|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|+
T Consensus 202 ~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 258 (440)
T 3zyj_A 202 NLTPLI-----------------------KLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLV 258 (440)
T ss_dssp CCTTCS-----------------------SCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCC
T ss_pred ccCCCc-----------------------ccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCC
Confidence 233333 566667777777777788888888888888888888888888888888888
Q ss_pred EEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 334 FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 334 ~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
.|+|++|+|++..+..+ ...|+.|+|++| ||.|+|...++..|+...
T Consensus 259 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N--------p~~CdC~l~~l~~~~~~~ 307 (440)
T 3zyj_A 259 EINLAHNNLTLLPHDLFTPLHHLERIHLHHN--------PWNCNCDILWLSWWIKDM 307 (440)
T ss_dssp EEECTTSCCCCCCTTTTSSCTTCCEEECCSS--------CEECSSTTHHHHHHHHTT
T ss_pred EEECCCCCCCccChhHhccccCCCEEEcCCC--------CccCCCCchHHHHHHHhc
Confidence 88888888885555444 247888888888 899999999999998754
No 41
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.5e-30 Score=285.20 Aligned_cols=273 Identities=20% Similarity=0.299 Sum_probs=229.8
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
|+++.+++++++++ .+|..+. +.|++|+|++|+|++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 45677889988888 4676554 689999999999999988888888 8999999999999888999999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcc--cCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG--KIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++. ..+..|.++++|++|++++|+++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999999 6676654 799999999999998777789999999999999999963 77888999999999999999998
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhh
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 327 (845)
. +|..+. ++|+.|++++|.++...+..+... +|+.|+|++|.+++..+..|..+++|++|+|++|+|+ .+|..+.
T Consensus 185 ~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 185 T-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp S-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred c-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 5 454443 789999999999888776666655 8999999999999888888999999999999999998 7888899
Q ss_pred cCCCcCEEEccCCcccCCCChhhh--------cCCceEEeecCCCcC--CCCCCCCC
Q 003134 328 KLAKTNFMYLTGNKLTGPVPKYIF--------NSNKNVDISLNNFTW--ESSDPIEC 374 (845)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~ip~~~~--------~~l~~L~ls~N~l~~--~~p~~~~c 374 (845)
.+++|++|+|++|++++..+..+. ..++.|++++|.+.. ..|..+.|
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~ 317 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRC 317 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTT
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccccc
Confidence 999999999999999865554442 357789999998763 33444544
No 42
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=1.6e-30 Score=313.39 Aligned_cols=297 Identities=19% Similarity=0.199 Sum_probs=249.7
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
..+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+ +|++|+|++|+|++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 3578999999999998877889999999999999999999999999998 999999999999987777899999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhc--CCcccceEEecCCcC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG--KWKKIQKLHIQGSSL 247 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l 247 (845)
|++|++++..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|++++..+..+. .+++|++|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999988888999999999999999999999999999999999999999999988888765 458999999999999
Q ss_pred CCCcchhhhcC---------------------------CCCCEEEcCCCCCCCCCCcccccC---CccEEEccCCcCccc
Q 003134 248 EGPIPASISAL---------------------------TSLTDLRISDLKGSESAFPKLDKM---NLKTLILTKCLIHGE 297 (845)
Q Consensus 248 ~g~~p~~~~~l---------------------------~~L~~L~Ls~n~~~~~~~~~l~~~---~L~~L~Ls~N~l~~~ 297 (845)
++..|..+..+ ++|+.|++++|.+.+..+..+... +|+.|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 99888877765 456777777777776655555443 599999999999998
Q ss_pred CcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC-----CCh----hh--hcCCceEEeecCCCcC
Q 003134 298 IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP-----VPK----YI--FNSNKNVDISLNNFTW 366 (845)
Q Consensus 298 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-----ip~----~~--~~~l~~L~ls~N~l~~ 366 (845)
.|..|..+++|++|+|++|++++..|..|.++++|+.|++++|...+. +|. .+ ...|+.|++++|++++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 889999999999999999999988888888888888888888766542 332 22 2478889999998888
Q ss_pred CCCCCCCCCCCCceeeeeecCCCCC
Q 003134 367 ESSDPIECPRGSVNLVESYSSPRNK 391 (845)
Q Consensus 367 ~~p~~~~c~~~~~~~l~~l~~~~n~ 391 (845)
..|..+. . +.-++.++.+.|.
T Consensus 344 ~~~~~~~-~---l~~L~~L~Ls~n~ 364 (680)
T 1ziw_A 344 IKSNMFT-G---LINLKYLSLSNSF 364 (680)
T ss_dssp CCTTTTT-T---CTTCCEEECTTCB
T ss_pred CChhHhc-c---ccCCcEEECCCCc
Confidence 7765442 2 2234444555444
No 43
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.97 E-value=4.3e-31 Score=309.96 Aligned_cols=118 Identities=25% Similarity=0.288 Sum_probs=100.6
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCC-cccccccccccceeE
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP-FPKVLTNITTLKNLS 169 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 169 (845)
.+++.|+|++|.+++..|..|+++++|++|+|++|++++..|..|..+ +|++|+|++|++++. .|..|+++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 478899999999999888899999999999999999999988888888 899999999999873 577888999999999
Q ss_pred eecccCCCCCC-cccccCCCccEEEeecCcCcccCChhhhC
Q 003134 170 IEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTK 209 (845)
Q Consensus 170 Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 209 (845)
|++|++.+.+| ..|.++++|++|+|++|++++..|..+.+
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 99998544554 57888888888888888888777766544
No 44
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1e-30 Score=286.91 Aligned_cols=271 Identities=21% Similarity=0.306 Sum_probs=229.8
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
|+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|..+ +|++|+|++|+|++..|..|.++++|++|+|
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 46678899999988 6777664 789999999999999988889888 8999999999999988999999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCc--ccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFS--GKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++ +..|..+..+ +|++|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 999999 6676665 79999999999999777778999999999999999996 4778888888 9999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhh
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 327 (845)
+ +|..+. ++|+.|++++|.+....+..+... +|+.|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+.
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 6 555443 789999999999988876666555 8999999999999888888999999999999999998 7888899
Q ss_pred cCCCcCEEEccCCcccCCCChhhh--------cCCceEEeecCCCc--CCCCCCCC
Q 003134 328 KLAKTNFMYLTGNKLTGPVPKYIF--------NSNKNVDISLNNFT--WESSDPIE 373 (845)
Q Consensus 328 ~l~~L~~L~L~~N~l~g~ip~~~~--------~~l~~L~ls~N~l~--~~~p~~~~ 373 (845)
.+++|+.|+|++|++++..+..+. ..++.|++++|.+. +..|..+.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 999999999999999865555442 34788999999876 44444343
No 45
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.97 E-value=4.8e-32 Score=291.19 Aligned_cols=161 Identities=24% Similarity=0.344 Sum_probs=132.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|++.+.||+|+||+||+|+.. .++.||||+++... .....++.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999863 37899999997642 2334578899999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
|||||+||+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999543 36899999999999999999999997 99999999999999999999999999997
Q ss_pred cCCCCceeeeeeccCC
Q 003134 830 YEEDKTHISTRIAGTM 845 (845)
Q Consensus 830 ~~~~~~~~~t~~~GT~ 845 (845)
...... ..+..+||+
T Consensus 176 ~~~~~~-~~~~~~GT~ 190 (304)
T 3ubd_A 176 SIDHEK-KAYSFCGTV 190 (304)
T ss_dssp -----C-CCCSCCCCG
T ss_pred ccCCCc-cccccccCc
Confidence 654333 234467885
No 46
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=2e-31 Score=282.49 Aligned_cols=159 Identities=30% Similarity=0.516 Sum_probs=126.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|++.+.||+|+||+||+|+.. +++.||+|++++.. ....+++.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999975 59999999996542 233567999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+ +|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+...
T Consensus 93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 999 67999998543 36999999999999999999999997 9999999999999999999999999999875
Q ss_pred CCCceeeeeeccCC
Q 003134 832 EDKTHISTRIAGTM 845 (845)
Q Consensus 832 ~~~~~~~t~~~GT~ 845 (845)
+.. ..+..+||+
T Consensus 164 ~~~--~~~~~~GT~ 175 (275)
T 3hyh_A 164 DGN--FLKTSCGSP 175 (275)
T ss_dssp -------------C
T ss_pred CCC--ccCCeeECc
Confidence 433 234467875
No 47
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=2.1e-31 Score=284.79 Aligned_cols=158 Identities=28% Similarity=0.475 Sum_probs=134.1
Q ss_pred CCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe----CCEEEEEE
Q 003134 679 DPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLLVY 751 (845)
Q Consensus 679 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lV~ 751 (845)
...++||+|+||+||+|.+. ++..||+|++.... ....++|.+|+++|++++|||||+++++|.+ ++.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999986 58899999996542 3335679999999999999999999999875 34689999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCcEEEEeeccceec
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAKLY 830 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~~kl~DFGla~~~ 830 (845)
|||++|+|.++++.. ..+++.++..|+.||+.||+|||+++ ++||||||||+|||++ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 999999999999643 36899999999999999999999985 4599999999999998 4799999999999865
Q ss_pred CCCCceeeeeeccCC
Q 003134 831 EEDKTHISTRIAGTM 845 (845)
Q Consensus 831 ~~~~~~~~t~~~GT~ 845 (845)
... ..+.++||+
T Consensus 183 ~~~---~~~~~~GTp 194 (290)
T 3fpq_A 183 RAS---FAKAVIGTP 194 (290)
T ss_dssp CTT---SBEESCSSC
T ss_pred CCC---ccCCcccCc
Confidence 432 234578886
No 48
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=1.9e-31 Score=290.03 Aligned_cols=157 Identities=29% Similarity=0.342 Sum_probs=133.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
+.|...++||+|+||+||+|++. +|+.||||+++.... ..+|+++|++++|||||++++++.+++.+|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999985 589999999975422 246999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC-cEEEEeeccceecCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-NAKISDFGLAKLYEED 833 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~-~~kl~DFGla~~~~~~ 833 (845)
+||+|.++++.. ..+++.++..|+.||+.||+|||+++ ||||||||+||||+.++ ++||+|||+|+.+..+
T Consensus 133 ~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 133 EGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp TTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred CCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 999999999643 36999999999999999999999987 99999999999999987 6999999999988654
Q ss_pred Ccee----eeeeccCC
Q 003134 834 KTHI----STRIAGTM 845 (845)
Q Consensus 834 ~~~~----~t~~~GT~ 845 (845)
.... ...++||+
T Consensus 205 ~~~~~~~~~~~~~GT~ 220 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTE 220 (336)
T ss_dssp ---------CCCCCCG
T ss_pred CcccceecCCccccCc
Confidence 3221 22357885
No 49
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=2.8e-31 Score=286.02 Aligned_cols=153 Identities=26% Similarity=0.505 Sum_probs=126.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCC--------
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-------- 745 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-------- 745 (845)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ...+++.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999975 589999999965432 33567899999999999999999999987544
Q ss_pred ----EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEE
Q 003134 746 ----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 746 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl 821 (845)
.+|+|||||++|+|.+++..... ....++..++.|+.||++||+|||+++ ||||||||+|||++.++.+||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC--CChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEE
Confidence 37999999999999999976432 224567788999999999999999997 999999999999999999999
Q ss_pred EeeccceecCCC
Q 003134 822 SDFGLAKLYEED 833 (845)
Q Consensus 822 ~DFGla~~~~~~ 833 (845)
+|||+|+.+..+
T Consensus 160 ~DFGla~~~~~~ 171 (299)
T 4g31_A 160 GDFGLVTAMDQD 171 (299)
T ss_dssp CCCCCC------
T ss_pred ccCccceecCCC
Confidence 999999988654
No 50
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.2e-31 Score=286.68 Aligned_cols=161 Identities=29% Similarity=0.388 Sum_probs=130.3
Q ss_pred CCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC----EEEEEEe
Q 003134 677 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----QLLLVYE 752 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV~E 752 (845)
+|...++||+|+||+||+|++ +|+.||||+++.... ....++.|+..+.+++|||||++++++.+++ .+|||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999998 589999999975422 1223345666667889999999999998654 6899999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-----SRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-----~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
||++|+|.++++.. .++|.++.+|+.|+++||+|||++ +.++||||||||+|||+|.++++||+|||+|
T Consensus 82 y~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999643 589999999999999999999986 2346999999999999999999999999999
Q ss_pred eecCCCCcee---eeeeccCC
Q 003134 828 KLYEEDKTHI---STRIAGTM 845 (845)
Q Consensus 828 ~~~~~~~~~~---~t~~~GT~ 845 (845)
+......... .+..+||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~ 176 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTK 176 (303)
T ss_dssp EEEETTTTEESCC-----CCG
T ss_pred ccccCCCCceeeecccccccc
Confidence 9886544332 22456774
No 51
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.5e-31 Score=287.09 Aligned_cols=259 Identities=20% Similarity=0.247 Sum_probs=208.0
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCC--cccccccccccceeEeec
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGP--FPKVLTNITTLKNLSIEG 172 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~ 172 (845)
.+++++++++ .+|..+. ++|++|+|++|+++.+.+..|..+ +|++|+|++|+++.. .+..+..+++|++|+|++
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 5677777777 4566553 689999999999997777777777 899999999998843 366777889999999999
Q ss_pred ccCCCCCCcccccCCCccEEEeecCcCcccCC-hhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC-C
Q 003134 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG-P 250 (845)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-~ 250 (845)
|.++ .+|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|++++..+..|..+++|++|+|++|++++ .
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 166 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 166 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccccc
Confidence 9988 567778889999999999999886555 578888999999999999988888888888999999999998886 5
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCC
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 330 (845)
+|..+..+++|+.| +|++|++++..|..|..+++|+.|+|++|++++..+..|..++
T Consensus 167 ~~~~~~~l~~L~~L-----------------------~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 167 LPDIFTELRNLTFL-----------------------DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp ECSCCTTCTTCCEE-----------------------ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred chhHHhhCcCCCEE-----------------------ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 67777777666555 5566666666777788888888888888888877777788888
Q ss_pred CcCEEEccCCcccCCCChhhh---cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCC
Q 003134 331 KTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPR 389 (845)
Q Consensus 331 ~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~ 389 (845)
+|++|+|++|++++..|..+. ..++.|+|++| +|.|+|...++.+|+....
T Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N--------~~~~~c~~~~~~~~l~~~~ 277 (306)
T 2z66_A 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN--------DFACTCEHQSFLQWIKDQR 277 (306)
T ss_dssp TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTC--------CEECSGGGHHHHHHHHHTG
T ss_pred cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCC--------CeecccChHHHHHHHHhhh
Confidence 888888888888877776653 36788888888 7779999999999987544
No 52
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=4.3e-30 Score=305.28 Aligned_cols=156 Identities=19% Similarity=0.254 Sum_probs=143.1
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
++++++++++ .+|..+. ++|++|+|++|++++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 5777888888 5677665 899999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcc-cCchhhcCCcccceEEecCCcCCCCcch
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999889999999999999999999998887889999999999999999986 5799999999999999999998876554
Q ss_pred h
Q 003134 254 S 254 (845)
Q Consensus 254 ~ 254 (845)
.
T Consensus 172 ~ 172 (606)
T 3vq2_A 172 D 172 (606)
T ss_dssp T
T ss_pred h
Confidence 3
No 53
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.9e-29 Score=276.49 Aligned_cols=265 Identities=20% Similarity=0.238 Sum_probs=231.3
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|..+ +|++|+|++|+|+. +|..+. ++|++|+|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEEC
Confidence 468899999999998888899999999999999999999999999998 99999999999994 555554 79999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcc--cCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|++++..+..|.++++|++|+|++|+++. ..+..|.++++|++|++++|+++. +|..+. ++|++|+|++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 9999998877889999999999999999964 778889999999999999999994 565554 79999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhh
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 327 (845)
+..|..|.++++|+.|++++|.++......+... +|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~ 284 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFC 284 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcC
Confidence 9989999999999999999999998777666554 8999999999999 7888899999999999999999988888776
Q ss_pred cC------CCcCEEEccCCcccC-CCC-hhh--hcCCceEEeecCC
Q 003134 328 KL------AKTNFMYLTGNKLTG-PVP-KYI--FNSNKNVDISLNN 363 (845)
Q Consensus 328 ~l------~~L~~L~L~~N~l~g-~ip-~~~--~~~l~~L~ls~N~ 363 (845)
.. +.|+.|++++|.+.. .++ ..+ ...++.++|++|+
T Consensus 285 ~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 285 PPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 43 789999999999964 343 333 2478999999984
No 54
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=1.3e-29 Score=284.40 Aligned_cols=271 Identities=18% Similarity=0.185 Sum_probs=228.8
Q ss_pred cCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
-.+++|++|++++|.++...+..+..+ +|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 457899999999999999888888888 9999999999999988889999999999999999999888888999999999
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~ 271 (845)
|+|++|+++...+..|.++++|++|+|++|++++..|..|..+++|++|++++|++++.. +..+++|+.|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccc
Confidence 999999999555555799999999999999999988999999999999999999999753 44555666655555554
Q ss_pred CC-------------------CCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCc
Q 003134 272 SE-------------------SAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 332 (845)
Q Consensus 272 ~~-------------------~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 332 (845)
+. .+... ..+|+.|+|++|.+++. ..+..+++|++|+|++|++++..|..|..+++|
T Consensus 199 ~~~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (390)
T 3o6n_A 199 STLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 274 (390)
T ss_dssp SEEECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred cccCCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccC
Confidence 43 22111 13799999999999874 578999999999999999999999999999999
Q ss_pred CEEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCcc
Q 003134 333 NFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 396 (845)
Q Consensus 333 ~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~ 396 (845)
+.|+|++|++++ +|... ...|+.|++++|++++.++. + ..+..++.++...|++....
T Consensus 275 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~-~----~~l~~L~~L~L~~N~i~~~~ 334 (390)
T 3o6n_A 275 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERN-Q----PQFDRLENLYLDHNSIVTLK 334 (390)
T ss_dssp CEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGG-H----HHHTTCSEEECCSSCCCCCC
T ss_pred CEEECCCCcCcc-cCcccCCCCCCCEEECCCCcceecCcc-c----cccCcCCEEECCCCccceeC
Confidence 999999999996 44443 46899999999999865432 2 23455778889999988763
No 55
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=1e-29 Score=301.53 Aligned_cols=270 Identities=18% Similarity=0.184 Sum_probs=230.8
Q ss_pred CCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEE
Q 003134 114 KLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (845)
Q Consensus 114 ~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 192 (845)
.+++++.|++++|.++.+++..|..+ +|++|+|++|.|++..|..|..+++|++|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46889999999999999988888888 99999999999999999999999999999999999999888899999999999
Q ss_pred EeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCC
Q 003134 193 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 272 (845)
Q Consensus 193 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~ 272 (845)
+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999766666899999999999999999999999999999999999999999764 444566666666655554
Q ss_pred C-------------------CCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcC
Q 003134 273 E-------------------SAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTN 333 (845)
Q Consensus 273 ~-------------------~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 333 (845)
. .+... ..+|+.|+|++|.+++ +..+..+++|+.|+|++|+|++.+|..|..+++|+
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 281 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 281 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred cccCCchhheeeccCCccccccccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCC
Confidence 3 22111 1379999999999987 47799999999999999999999999999999999
Q ss_pred EEEccCCcccCCCChhh--hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCcc
Q 003134 334 FMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVH 396 (845)
Q Consensus 334 ~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~ 396 (845)
.|+|++|++++ +|..+ ...|+.|+|++|.+++.++ .+ ..+..++.++.+.|++.+..
T Consensus 282 ~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i~~-~~----~~l~~L~~L~L~~N~l~~~~ 340 (597)
T 3oja_B 282 RLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVER-NQ----PQFDRLENLYLDHNSIVTLK 340 (597)
T ss_dssp EEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCCGG-GH----HHHTTCSEEECCSSCCCCCC
T ss_pred EEECCCCCCCC-CCcccccCCCCcEEECCCCCCCccCc-cc----ccCCCCCEEECCCCCCCCcC
Confidence 99999999997 45444 4689999999999995433 22 23455778889999988764
No 56
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.5e-29 Score=277.58 Aligned_cols=264 Identities=20% Similarity=0.251 Sum_probs=231.3
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|++++|.+++..|..|.++++|++|+|++|++++..|..|..+ +|++|+|++|+++ .+|..+. ++|++|+|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 478999999999998888899999999999999999999999999998 9999999999999 4555554 89999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCc--ccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFT--GELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|++++..+..|.++++|++|+|++|+++ +..|..+..+ +|++|++++|++++ +|..+. ++|++|+|++|+++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~ 206 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQ 206 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCC
Confidence 999999777778999999999999999996 4778888888 99999999999996 666554 79999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhh
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFE 327 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 327 (845)
+..+..+.++++|+.|++++|.+.......+... +|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|.
T Consensus 207 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 207 AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp CCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 9999999999999999999999999887666655 8999999999999 7888899999999999999999988888777
Q ss_pred cC------CCcCEEEccCCccc--CCCChhh--hcCCceEEeecCC
Q 003134 328 KL------AKTNFMYLTGNKLT--GPVPKYI--FNSNKNVDISLNN 363 (845)
Q Consensus 328 ~l------~~L~~L~L~~N~l~--g~ip~~~--~~~l~~L~ls~N~ 363 (845)
.+ +.|+.|++++|.+. +..|..+ ...++.+++++|+
T Consensus 286 ~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 286 PVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 64 67999999999997 4445444 3478999999983
No 57
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=4.3e-29 Score=297.37 Aligned_cols=155 Identities=21% Similarity=0.256 Sum_probs=138.7
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
+.+.++.+|+ .+|..+. +++++|||++|+|+++.+..|..+ +|++|+|++|+|+++.|.+|.+|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 3466677787 5676653 589999999999999999999999 99999999999999989999999999999999999
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcc-cCchhhcCCcccceEEecCCcCCCCcch
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++ .+|..++.+++|++|+|++|+|++..|.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 997777789999999999999999998777789999999999999999986 4688899999999999999998765443
No 58
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1e-29 Score=272.60 Aligned_cols=238 Identities=19% Similarity=0.229 Sum_probs=170.2
Q ss_pred EEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecc
Q 003134 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (845)
Q Consensus 95 ~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 173 (845)
+.+++++++++. +|..+ .++|++|+|++|++++..+..|..+ +|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 567888888874 56544 4688888888888887777777766 7777777777777766777777777777777777
Q ss_pred c-CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 174 L-FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 174 ~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
+ ++...|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 665556677777777777777777776666667777777777777777776655666777777777777777765554
Q ss_pred hhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCc
Q 003134 253 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKT 332 (845)
Q Consensus 253 ~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 332 (845)
..|.++++| +.|+|++|.+++..|..|..+++|+.|+|++|+|++..+..|..+++|
T Consensus 171 ~~~~~l~~L-----------------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 171 RAFRGLHSL-----------------------DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTTCTTC-----------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HHhcCcccc-----------------------CEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 455555544 444556666666677777778888888888888887666777777777
Q ss_pred CEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 333 NFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 333 ~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
++|+|++| +|.|+|...+++.|+...
T Consensus 228 ~~L~l~~N------------------------------~~~c~~~~~~~~~~l~~~ 253 (285)
T 1ozn_A 228 QYLRLNDN------------------------------PWVCDCRARPLWAWLQKF 253 (285)
T ss_dssp CEEECCSS------------------------------CEECSGGGHHHHHHHHHC
T ss_pred CEEeccCC------------------------------CccCCCCcHHHHHHHHhc
Confidence 77777777 555777777777776543
No 59
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.96 E-value=1.6e-30 Score=285.98 Aligned_cols=177 Identities=25% Similarity=0.390 Sum_probs=145.3
Q ss_pred ccHHHHHHHhcCCCCCCcccccCcEEEEEEEECC------CcEEEEEEcCcccc-cchHHHHHHHHHHhcCCC-CceeeE
Q 003134 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSR-QGNREFVNEIGMISAQQH-PNLVKL 737 (845)
Q Consensus 666 ~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H-~nIv~l 737 (845)
+...+.+...++|+..+.||+|+||+||+|++.. ++.||||+++.... ...++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3444555567889999999999999999998642 46899999976533 335689999999999966 899999
Q ss_pred EEEEEeC-CEEEEEEeccCCCChhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCC
Q 003134 738 YGCCVEG-NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRD 805 (845)
Q Consensus 738 ~~~~~~~-~~~~lV~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrD 805 (845)
+|+|.+. +.++||||||++|+|.++|+..... ....++|.+++.|+.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9999765 5789999999999999999754321 1245899999999999999999999987 99999
Q ss_pred CCCCCEEecCCCcEEEEeeccceecCCCCce-eeeeeccCC
Q 003134 806 IKTSNVLLDKDLNAKISDFGLAKLYEEDKTH-ISTRIAGTM 845 (845)
Q Consensus 806 LKp~NILld~~~~~kl~DFGla~~~~~~~~~-~~t~~~GT~ 845 (845)
|||+|||+++++.+||+|||+|+.+..+... ..+...||+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~ 251 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECG
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccc
Confidence 9999999999999999999999987654443 233456663
No 60
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.7e-28 Score=267.22 Aligned_cols=224 Identities=22% Similarity=0.304 Sum_probs=176.7
Q ss_pred CCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEE
Q 003134 114 KLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (845)
Q Consensus 114 ~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 192 (845)
..++++.|+|++|.++ .+|..+..+ +|++|+|++|+|+ .+|..|+++++|++|+|++|+++ .+|..|.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3477888888888888 445556656 7788888888877 67777777788888888888777 667777777888888
Q ss_pred EeecCcCcccCChhhhC---------CCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCE
Q 003134 193 ILSSNSFTGELPAELTK---------LTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTD 263 (845)
Q Consensus 193 ~Ls~N~l~g~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 263 (845)
+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..+.++++|++|+|++|++++ +|..++.+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~--- 230 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPK--- 230 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTT---
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCC---
Confidence 88877777777776554 677777777777776 666667777777777777777774 4445666555
Q ss_pred EEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCccc
Q 003134 264 LRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 264 L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
|+.|+|++|.+.+.+|..|.++++|++|+|++|++.+.+|..+.++++|++|+|++|++.
T Consensus 231 --------------------L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 231 --------------------LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp --------------------CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred --------------------CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 455577778888889999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhc--CCceEEeecCCCc
Q 003134 344 GPVPKYIFN--SNKNVDISLNNFT 365 (845)
Q Consensus 344 g~ip~~~~~--~l~~L~ls~N~l~ 365 (845)
+.+|..+.. .++.+++..|.+.
T Consensus 291 ~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 291 SRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhccHHHhhccCceEEeCCHHHHH
Confidence 999999854 7899999888554
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=5.6e-28 Score=266.49 Aligned_cols=259 Identities=20% Similarity=0.278 Sum_probs=172.9
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEee
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 171 (845)
+++.|++++|.+++. ++ +..+++|++|+|++|.++.. +.+..+ +|++|+|++|++++..+ +..+++|++|+++
T Consensus 67 ~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~ 140 (347)
T 4fmz_A 67 NLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLG 140 (347)
T ss_dssp TCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECT
T ss_pred CccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECC
Confidence 566777777777643 33 67777777777777777664 245555 67777777777765433 6667777777777
Q ss_pred cccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCc
Q 003134 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (845)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 251 (845)
+|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++..
T Consensus 141 ~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 215 (347)
T 4fmz_A 141 ANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDIT 215 (347)
T ss_dssp TCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCG
T ss_pred CCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCc
Confidence 775553333 36777777777777777764333 6677777777777777764333 666777777777777777554
Q ss_pred chhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCC
Q 003134 252 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 331 (845)
Q Consensus 252 p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 331 (845)
+ +..+++|+.|++++|.++..+. .....+|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++
T Consensus 216 ~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~ 288 (347)
T 4fmz_A 216 P--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQ 288 (347)
T ss_dssp G--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTT
T ss_pred h--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCC
Confidence 4 6677777777777777766544 22223677777777777753 3567777777777777777754 35677777
Q ss_pred cCEEEccCCcccCCCChhhh--cCCceEEeecCCCcCCCC
Q 003134 332 TNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESS 369 (845)
Q Consensus 332 L~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p 369 (845)
|+.|++++|++++..|..+. .+|+.|++++|++++..|
T Consensus 289 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 289 LNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp CSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 77777777777766666553 467777777777776655
No 62
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=6.7e-28 Score=277.18 Aligned_cols=280 Identities=25% Similarity=0.337 Sum_probs=159.1
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..+ +.++++|++|+|++|++++..+ +..+ +|++|+|++|++++..+ +.++++|++|+|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEEC
Confidence 468889999998886543 8899999999999999988766 7777 89999999999887644 888899999999
Q ss_pred ecccCCCCCCcccccCCCccEEEe---------------------ecCcCcccCChhhhCCCCCCcEEeecCcCcccCch
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLIL---------------------SSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPE 229 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~L---------------------s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (845)
++|++++. + .+..+++|++|++ ++|++++. ..+..+++|++|++++|++++..|
T Consensus 142 ~~n~l~~~-~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 216 (466)
T 1o6v_A 142 SSNTISDI-S-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP- 216 (466)
T ss_dssp EEEEECCC-G-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCCccCCC-h-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-
Confidence 99988853 3 3444544444444 44444421 124444444444444444443332
Q ss_pred hhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcC
Q 003134 230 FIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLK 309 (845)
Q Consensus 230 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 309 (845)
++.+++|++|++++|++++. ..+..+++|+.|++++|.+..... .....+|+.|+|++|.+++..+ +..+++|+
T Consensus 217 -~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 290 (466)
T 1o6v_A 217 -LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALT 290 (466)
T ss_dssp -GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCS
T ss_pred -ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccC
Confidence 34444444444444444432 234444555555555554444332 1111245555555555554333 45555555
Q ss_pred EEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCC
Q 003134 310 NIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPR 389 (845)
Q Consensus 310 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~ 389 (845)
.|+|++|++++..| +..+++|+.|+|++|++++..|-.-...|+.|++++|.+++.. . ...+.-+++++...
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~----l~~l~~L~~L~l~~ 362 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVS--S----LANLTNINWLSAGH 362 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCCG--G----GTTCTTCCEEECCS
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCch--h----hccCCCCCEEeCCC
Confidence 55555555554333 4555555555555555555444333345555555555555431 1 11223344555555
Q ss_pred CCCCCcc
Q 003134 390 NKLDKVH 396 (845)
Q Consensus 390 n~~~~~~ 396 (845)
|++.+..
T Consensus 363 n~l~~~~ 369 (466)
T 1o6v_A 363 NQISDLT 369 (466)
T ss_dssp SCCCBCG
T ss_pred CccCccc
Confidence 5555443
No 63
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.6e-30 Score=279.30 Aligned_cols=245 Identities=20% Similarity=0.218 Sum_probs=134.9
Q ss_pred cCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCC-CCCcccccc-------cccccceeEeecccCCCCCCccc-
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRL-SGPFPKVLT-------NITTLKNLSIEGNLFTGSIPPDI- 183 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~~- 183 (845)
+.+++|+.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 3445555566666665 344433332 55555555555 233444443 45666666666666665555554
Q ss_pred -ccCCCccEEEeecCcCcccCChhhhCC-----CCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC--cchhh
Q 003134 184 -RKLINLQKLILSSNSFTGELPAELTKL-----TNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IPASI 255 (845)
Q Consensus 184 -~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~ 255 (845)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|+|++..|..|+++++|++|+|++|++.+. .|..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 5566666666666666654 5555554 5666666666666655555666666666666666665543 22333
Q ss_pred --hcCCCCCEEEcCCCCCCCCCC---ccccc-CCccEEEccCCcCcccCc-ccccCCCCcCEEeCCCCCCCCCCchhhhc
Q 003134 256 --SALTSLTDLRISDLKGSESAF---PKLDK-MNLKTLILTKCLIHGEIP-DYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (845)
Q Consensus 256 --~~l~~L~~L~Ls~n~~~~~~~---~~l~~-~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 328 (845)
.++++|+.|++++|.++.... ..+.. .+|+.|+|++|+|++.+| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~- 273 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP- 273 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-
Confidence 555666666666665553211 11111 256666666666666554 33445566666666666666 5555444
Q ss_pred CCCcCEEEccCCcccCCCChhh--hcCCceEEeecCCCcC
Q 003134 329 LAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLNNFTW 366 (845)
Q Consensus 329 l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N~l~~ 366 (845)
++|++|+|++|+|++. |. + ...|+.|++++|++++
T Consensus 274 -~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5666666666666654 43 2 2355666666666554
No 64
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=6.1e-28 Score=276.32 Aligned_cols=280 Identities=18% Similarity=0.120 Sum_probs=224.7
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|++++|.+++. | .|+.+++|++|+|++|+|++. | +..+ +|++|+|++|+|++. + ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4788999999999974 5 799999999999999999986 2 6777 899999999999985 3 889999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 250 (845)
++|++++ +| ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+ .+..+++|++|++++|++++.
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l 185 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL 185 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee
Confidence 9999996 44 88999999999999999974 3 788999999999999766666 478899999999999999974
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCC
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 330 (845)
| ++.+++|+.|++++|.++...+. ...+|+.|+|++|+|++ +| ++.+++|+.|++++|+|++..+..+.+|.
T Consensus 186 -~--l~~l~~L~~L~l~~N~l~~~~l~--~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~ 257 (457)
T 3bz5_A 186 -D--VSQNKLLNRLNCDTNNITKLDLN--QNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLT 257 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSCCCCT--TCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCC
T ss_pred -c--cccCCCCCEEECcCCcCCeeccc--cCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCC
Confidence 4 88899999999999999887422 22389999999999998 55 88899999999999999987766666655
Q ss_pred -------CcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCC----CCCCceeeeeecCCCCCCCCc
Q 003134 331 -------KTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIEC----PRGSVNLVESYSSPRNKLDKV 395 (845)
Q Consensus 331 -------~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c----~~~~~~~l~~l~~~~n~~~~~ 395 (845)
+|+.|++++|++.|.+|..-...|+.|++++|.+.+.+|..+.. +-.....++.++.+.|++++.
T Consensus 258 ~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l 333 (457)
T 3bz5_A 258 TLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL 333 (457)
T ss_dssp EEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC
T ss_pred EEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc
Confidence 56677777777777777555678888899998887777632210 011223456666777777664
No 65
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.8e-29 Score=271.05 Aligned_cols=255 Identities=17% Similarity=0.212 Sum_probs=210.0
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCC--Cccccccc-ceeEEEecCCCCCCCcccccccccccce
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS--FSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKN 167 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~--~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 167 (845)
..+++.|+|++|.++...+..|.++++|++|+|++|+++.. .+..+..+ +|++|+|++|+++ .+|..+..+++|++
T Consensus 27 ~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 35789999999999965455689999999999999999854 35556566 9999999999999 46777999999999
Q ss_pred eEeecccCCCCCC-cccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcc-cCchhhcCCcccceEEecCC
Q 003134 168 LSIEGNLFTGSIP-PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSG-KIPEFIGKWKKIQKLHIQGS 245 (845)
Q Consensus 168 L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N 245 (845)
|+|++|++++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++ .+|..+..+++|++|+|++|
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 185 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 185 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCC
Confidence 9999999997655 589999999999999999999999999999999999999999997 68999999999999999999
Q ss_pred cCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchh
Q 003134 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTT 325 (845)
Q Consensus 246 ~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 325 (845)
++++..|..+..+++|+.|+ |++|++++..+..|..+++|+.|+|++|++++..|..
T Consensus 186 ~l~~~~~~~~~~l~~L~~L~-----------------------L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 242 (306)
T 2z66_A 186 QLEQLSPTAFNSLSSLQVLN-----------------------MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE 242 (306)
T ss_dssp CCCEECTTTTTTCTTCCEEE-----------------------CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS
T ss_pred CcCCcCHHHhcCCCCCCEEE-----------------------CCCCccCccChhhccCcccCCEeECCCCCCcccCHHH
Confidence 99988888888888776665 5555555566666778888888888888888888888
Q ss_pred hhcCC-CcCEEEccCCcccCCCCh-hh---hcCCceEEeecCCCcCCCC
Q 003134 326 FEKLA-KTNFMYLTGNKLTGPVPK-YI---FNSNKNVDISLNNFTWESS 369 (845)
Q Consensus 326 ~~~l~-~L~~L~L~~N~l~g~ip~-~~---~~~l~~L~ls~N~l~~~~p 369 (845)
+..++ +|++|+|++|++++..+. ++ ....+.+.+..|.+.+..|
T Consensus 243 ~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 243 LQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred HHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 88884 888888888888875432 12 2234455555665555554
No 66
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=9e-28 Score=264.83 Aligned_cols=258 Identities=20% Similarity=0.286 Sum_probs=224.6
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
..+++.|++++|.++.. +.|.++++|++|+|++|++++..+ +..+ +|++|++++|.....++. +..+++|++|+
T Consensus 87 l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~ 161 (347)
T 4fmz_A 87 LVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLT 161 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEE
T ss_pred CCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEE
Confidence 35789999999999863 579999999999999999998755 6677 999999999976655544 89999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
+++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|++|++++|++++
T Consensus 162 l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 162 VTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp CCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred ecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC
Confidence 99999995543 8999999999999999985443 8899999999999999996655 8899999999999999997
Q ss_pred CcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhc
Q 003134 250 PIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (845)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 328 (845)
..+ +..+++|+.|++++|.++.. +.+.. .+|+.|++++|++++. ..+..+++|+.|+|++|++++..|..|..
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 655 89999999999999999875 33333 3899999999999975 46889999999999999999999999999
Q ss_pred CCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCc
Q 003134 329 LAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFT 365 (845)
Q Consensus 329 l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~ 365 (845)
+++|++|+|++|++++..|-.-...|+.|++++|.++
T Consensus 310 l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp CTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred cccCCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 9999999999999998877455679999999999765
No 67
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=1.5e-27 Score=274.24 Aligned_cols=280 Identities=25% Similarity=0.346 Sum_probs=206.2
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|++.++++.. +| .+..+++|++|+|++|.+++..+ +..+ +|++|+|++|++++..+ +.++++|++|+|
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 478899999999985 55 48899999999999999998866 7777 99999999999997766 999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCC-------------------hhhhCCCCCCcEEeecCcCcccCchhh
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-------------------AELTKLTNLNDLRISDNNFSGKIPEFI 231 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-------------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 231 (845)
++|++++. +. +.++++|++|+|++|++++... ..+.++++|++|++++|++++. ..+
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l 195 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVL 195 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGG
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhh
Confidence 99999965 33 9999999999999999985321 1245556666666777766643 236
Q ss_pred cCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCE
Q 003134 232 GKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKN 310 (845)
Q Consensus 232 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 310 (845)
..+++|++|++++|++++..| ++.+++|+.|++++|.+.... .+.. .+|+.|++++|.+++..| +..+++|+.
T Consensus 196 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 269 (466)
T 1o6v_A 196 AKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIG--TLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 269 (466)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred ccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccch--hhhcCCCCCEEECCCCccccchh--hhcCCCCCE
Confidence 666777777777777766554 566777777777777766542 2322 267777777777776655 677777777
Q ss_pred EeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCC
Q 003134 311 IDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRN 390 (845)
Q Consensus 311 L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n 390 (845)
|+|++|++++..+ +..+++|+.|+|++|++++..|-.-..+|+.|++++|++++..| + ..+..++.++...|
T Consensus 270 L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~----~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 270 LKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--V----SSLTKLQRLFFYNN 341 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--G----GGCTTCCEEECCSS
T ss_pred EECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--h----ccCccCCEeECCCC
Confidence 7777777775444 77777788888888877765553334577788888887777655 1 23344566666777
Q ss_pred CCCCc
Q 003134 391 KLDKV 395 (845)
Q Consensus 391 ~~~~~ 395 (845)
++.+.
T Consensus 342 ~l~~~ 346 (466)
T 1o6v_A 342 KVSDV 346 (466)
T ss_dssp CCCCC
T ss_pred ccCCc
Confidence 66654
No 68
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-29 Score=276.17 Aligned_cols=243 Identities=20% Similarity=0.260 Sum_probs=208.8
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCccc-CCCccccc-------cc-ceeEEEecCCCCCCCccccc--cc
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLT-GSFSPQWA-------SL-QLVELSVMGNRLSGPFPKVL--TN 161 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~-------~l-~L~~L~Ls~N~l~~~~p~~~--~~ 161 (845)
+++.+++++|.+ .+|..+... |+.|+|++|+++ ..+|..+. .+ +|++|+|++|++++.+|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 466778889998 788877655 999999999994 55666554 45 89999999999999999986 89
Q ss_pred ccccceeEeecccCCCCCCcccccC-----CCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCccc--Cchhh--c
Q 003134 162 ITTLKNLSIEGNLFTGSIPPDIRKL-----INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--IPEFI--G 232 (845)
Q Consensus 162 l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~ 232 (845)
+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|.++++|++|+|++|++++. .|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 99999999999999977 8888888 9999999999999988889999999999999999999876 34455 8
Q ss_pred CCcccceEEecCCcCCC--Ccc-hhhhcCCCCCEEEcCCCCCCCCCC-ccccc-CCccEEEccCCcCcccCcccccCCCC
Q 003134 233 KWKKIQKLHIQGSSLEG--PIP-ASISALTSLTDLRISDLKGSESAF-PKLDK-MNLKTLILTKCLIHGEIPDYIGDMTK 307 (845)
Q Consensus 233 ~l~~L~~L~Ls~N~l~g--~~p-~~~~~l~~L~~L~Ls~n~~~~~~~-~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~ 307 (845)
.+++|++|+|++|+|++ .++ ..+.++++|+.|++++|.+.+..+ ..+.. .+|+.|+|++|+|+ .+|..+. ++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~ 275 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AK 275 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CC
Confidence 89999999999999994 223 455788999999999999988663 33433 48999999999999 7787776 89
Q ss_pred cCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC
Q 003134 308 LKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 308 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
|++|||++|+|++. |. +..+++|++|+|++|++++.
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred ceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 99999999999976 66 99999999999999999863
No 69
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.95 E-value=7e-29 Score=277.57 Aligned_cols=161 Identities=22% Similarity=0.402 Sum_probs=135.9
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe------CCE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE------GNQ 746 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 746 (845)
++|++.+.||+|+||+||+|++. +|+.||||+++... ....+++.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57899999999999999999985 69999999997542 2334678899999999999999999999764 357
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
+|||||||+ |+|.+++... ..+++.++..|+.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecce
Confidence 899999996 6799998653 36999999999999999999999997 99999999999999999999999999
Q ss_pred ceecCCCC---ceeeeeeccCC
Q 003134 827 AKLYEEDK---THISTRIAGTM 845 (845)
Q Consensus 827 a~~~~~~~---~~~~t~~~GT~ 845 (845)
|+.+.... ....+..+||+
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~ 226 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATR 226 (398)
T ss_dssp CBCC-------CCCCCSSCCCC
T ss_pred eeecccCccccccccccceeCh
Confidence 99874322 22334567875
No 70
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5e-28 Score=276.13 Aligned_cols=228 Identities=22% Similarity=0.250 Sum_probs=205.7
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
..++.|+|++|++++..+..|.++++|++|+|++|+|+++.+..|..+ +|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 467899999999999989999999999999999999999999999998 9999999999999888889999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecC-cCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
++|+|++..+..|.++++|++|+|++| .+....+..|.++++|++|+|++|+|+ .+| .+..+++|++|+|++|+|++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 999999877779999999999999995 455444557999999999999999999 455 48899999999999999999
Q ss_pred CcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcC
Q 003134 250 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (845)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 329 (845)
..|..|.++++|+.| +|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+
T Consensus 222 ~~~~~~~~l~~L~~L-----------------------~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKL-----------------------WMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp ECTTTTTTCTTCCEE-----------------------ECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cChhhhccCccCCEE-----------------------ECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 889999888876665 566677777788889999999999999999998888889999
Q ss_pred CCcCEEEccCCcccC
Q 003134 330 AKTNFMYLTGNKLTG 344 (845)
Q Consensus 330 ~~L~~L~L~~N~l~g 344 (845)
++|+.|+|++|.+.-
T Consensus 279 ~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 279 HHLERIHLHHNPWNC 293 (440)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred cCCCEEEcCCCCccC
Confidence 999999999999864
No 71
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.95 E-value=2.1e-28 Score=270.71 Aligned_cols=146 Identities=24% Similarity=0.429 Sum_probs=131.2
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 748 (845)
..++|++.++||+|+||+||+|+.+ +++.||+|++... ....++.+|+++|.++ +|||||++++++.+.+..|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999863 4688999998654 3346788999999988 6999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC-CcEEEEeeccc
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-LNAKISDFGLA 827 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~-~~~kl~DFGla 827 (845)
+||||+++|+|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|
T Consensus 97 lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 9999999999999982 4789999999999999999999997 9999999999999877 79999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+...+
T Consensus 166 ~~~~~ 170 (361)
T 4f9c_A 166 QGTHD 170 (361)
T ss_dssp EECTT
T ss_pred cccCC
Confidence 97654
No 72
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.95 E-value=2.2e-28 Score=285.25 Aligned_cols=159 Identities=27% Similarity=0.388 Sum_probs=136.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHH---HHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFV---NEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
++|++.++||+|+||+||+|+.. +|+.||||++++.. ......+. .++++++.++|||||++++++.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 56899999999999999999986 59999999997542 22223333 3466778889999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+|||||+||+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+||||+.+|++||+|||+|+
T Consensus 269 lVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999543 36899999999999999999999997 9999999999999999999999999999
Q ss_pred ecCCCCceeeeeeccCC
Q 003134 829 LYEEDKTHISTRIAGTM 845 (845)
Q Consensus 829 ~~~~~~~~~~t~~~GT~ 845 (845)
.+..... ...+||+
T Consensus 341 ~~~~~~~---~t~~GTp 354 (689)
T 3v5w_A 341 DFSKKKP---HASVGTH 354 (689)
T ss_dssp ECSSCCC---CSCCSCG
T ss_pred ecCCCCC---CCccCCc
Confidence 8865432 3467885
No 73
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4e-28 Score=258.94 Aligned_cols=219 Identities=20% Similarity=0.259 Sum_probs=167.2
Q ss_pred cCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCC
Q 003134 100 KAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGS 178 (845)
Q Consensus 100 ~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 178 (845)
.+.+++ .+|..+. ++|++|+|++|++++..+..|..+ +|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 15 ~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (276)
T 2z62_A 15 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 91 (276)
T ss_dssp TTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred cCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCcc
Confidence 344444 3555553 578899999999888877777777 788888888888877777888888888888888888877
Q ss_pred CCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCccc-CchhhcCCcccceEEecCCcCCCCcchhhhc
Q 003134 179 IPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIPASISA 257 (845)
Q Consensus 179 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 257 (845)
.+..|.++++|++|++++|++++..+..+.++++|++|+|++|++++. +|..|.++++|++|+|++|++++..+..+..
T Consensus 92 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 171 (276)
T 2z62_A 92 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171 (276)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred ChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh
Confidence 777788888888888888888876666788888888888888888763 5778888888888888888888776777766
Q ss_pred CCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEc
Q 003134 258 LTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYL 337 (845)
Q Consensus 258 l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 337 (845)
+.+|+.|.+ .|++++|.+++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 172 l~~L~~l~l-------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 231 (276)
T 2z62_A 172 LHQMPLLNL-------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWL 231 (276)
T ss_dssp HHTCTTCCE-------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEEC
T ss_pred hhhccccce-------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEc
Confidence 666553211 5677777777666655554 47888889888888777777788888888888
Q ss_pred cCCc
Q 003134 338 TGNK 341 (845)
Q Consensus 338 ~~N~ 341 (845)
++|+
T Consensus 232 ~~N~ 235 (276)
T 2z62_A 232 HTNP 235 (276)
T ss_dssp CSSC
T ss_pred cCCc
Confidence 8883
No 74
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.9e-28 Score=269.72 Aligned_cols=256 Identities=19% Similarity=0.228 Sum_probs=226.7
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|++++|++++..+..|.++++|++|+|++|++++..+..|..+ +|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 478999999999998777799999999999999999999999999998 9999999999999877777999999999999
Q ss_pred ecccCCCCCC-cccccCCCccEEEeecC-cCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIP-PDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p-~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|++++..+ ..|.++++|++|++++| .+++..+..|.++++|++|++++|++++..|..|..+++|++|++++|+++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999995444 47899999999999999 577677788999999999999999999999999999999999999999998
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCccccc----CCccEEEccCCcCcc----cCcccccCCCCcCEEeCCCCCCCC
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDK----MNLKTLILTKCLIHG----EIPDYIGDMTKLKNIDLSFNNLTG 320 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~----~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g 320 (845)
...+..+..+++|+.|++++|.++...+..+.. ..++.++|++|.+++ .+|..+..+++|+.|+|++|+|+.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 655556677999999999999999876655432 268899999999987 478889999999999999999995
Q ss_pred CCchhhhcCCCcCEEEccCCcccCCCC
Q 003134 321 GIPTTFEKLAKTNFMYLTGNKLTGPVP 347 (845)
Q Consensus 321 ~~p~~~~~l~~L~~L~L~~N~l~g~ip 347 (845)
..+..|.++++|++|+|++|++++..|
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 444447999999999999999998776
No 75
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=6.8e-29 Score=270.66 Aligned_cols=264 Identities=17% Similarity=0.140 Sum_probs=225.5
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEee
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 171 (845)
+....+++.+++...+...+..+++|++|+|++|++++..|..|..+ +|++|+|++|++++..+ |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 56667888888887766777888999999999999999999999998 99999999999997665 9999999999999
Q ss_pred cccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCc
Q 003134 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (845)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 251 (845)
+|+|++. ...++|++|++++|++++..+.. +++|++|+|++|++++..+..+..+++|++|+|++|++++..
T Consensus 89 ~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQEL-----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEE-----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCccccc-----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 9999843 34589999999999999766543 678999999999999988889999999999999999999988
Q ss_pred chhhh-cCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCC
Q 003134 252 PASIS-ALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (845)
Q Consensus 252 p~~~~-~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 330 (845)
+..+. .+++|+.|++++|.++..+... ...+|+.|+|++|+|++..+. |..+++|+.|+|++|+|+ .+|..+..++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCC
Confidence 88774 7999999999999998763322 345899999999999976554 889999999999999999 5788899999
Q ss_pred CcCEEEccCCccc-CCCChhhh--cCCceEEee-cCCCcCCCC
Q 003134 331 KTNFMYLTGNKLT-GPVPKYIF--NSNKNVDIS-LNNFTWESS 369 (845)
Q Consensus 331 ~L~~L~L~~N~l~-g~ip~~~~--~~l~~L~ls-~N~l~~~~p 369 (845)
+|+.|+|++|+++ +.+|..+. ..++.|+++ .+.++|..|
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 9999999999998 66666664 367888888 444555544
No 76
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.95 E-value=7.6e-28 Score=282.14 Aligned_cols=161 Identities=24% Similarity=0.430 Sum_probs=142.3
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+++|++++|||||++++++.+++.+|+|||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57999999999999999999986 59999999997765555678899999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC--CcEEEEeeccceecCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD--LNAKISDFGLAKLYEE 832 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~--~~~kl~DFGla~~~~~ 832 (845)
+||+|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 237 ~gg~L~~~i~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 237 SGGELFEKVADEH----NKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCBHHHHHTCTT----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred CCCcHHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 9999999985432 26899999999999999999999997 9999999999999854 8999999999999865
Q ss_pred CCceeeeeeccCC
Q 003134 833 DKTHISTRIAGTM 845 (845)
Q Consensus 833 ~~~~~~t~~~GT~ 845 (845)
... .+..+||+
T Consensus 310 ~~~--~~~~~GT~ 320 (573)
T 3uto_A 310 KQS--VKVTTGTA 320 (573)
T ss_dssp TSE--EEEECSSG
T ss_pred CCc--eeeeEECc
Confidence 432 34467874
No 77
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.2e-28 Score=282.39 Aligned_cols=248 Identities=18% Similarity=0.156 Sum_probs=199.6
Q ss_pred cCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCC
Q 003134 100 KAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGS 178 (845)
Q Consensus 100 ~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 178 (845)
...++...+......+++|++|+|++|.|++..|..|..+ +|++|+|++|.|++..| |..+++|++|+|++|.|++.
T Consensus 18 ~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l 95 (487)
T 3oja_A 18 TDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL 95 (487)
T ss_dssp CTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE
T ss_pred chhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC
Confidence 3334433333333444589999999999999888888888 89999999999987766 88899999999999998843
Q ss_pred CCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhh-c
Q 003134 179 IPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASIS-A 257 (845)
Q Consensus 179 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~ 257 (845)
. ..++|++|+|++|+|++..+. .+++|++|+|++|+|++..|..|+.+++|++|+|++|.|++.+|..+. .
T Consensus 96 ~-----~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~ 167 (487)
T 3oja_A 96 L-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAAS 167 (487)
T ss_dssp E-----ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGG
T ss_pred C-----CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhh
Confidence 2 348999999999999976654 357899999999999988888999999999999999999998888886 7
Q ss_pred CCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEc
Q 003134 258 LTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYL 337 (845)
Q Consensus 258 l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 337 (845)
+++|+.|+|++|.++..+... ...+|+.|+|++|.|++..|. |..+++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 168 l~~L~~L~Ls~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l 244 (487)
T 3oja_A 168 SDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDL 244 (487)
T ss_dssp TTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEEC
T ss_pred CCcccEEecCCCccccccccc-cCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEc
Confidence 899999999999988763322 344899999999999976665 8889999999999999995 6778899999999999
Q ss_pred cCCccc-CCCChhhhc--CCceEEee
Q 003134 338 TGNKLT-GPVPKYIFN--SNKNVDIS 360 (845)
Q Consensus 338 ~~N~l~-g~ip~~~~~--~l~~L~ls 360 (845)
++|.++ +.+|..+.. .++.++++
T Consensus 245 ~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 245 RGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCcCcchHHHHHhCCCCcEEecc
Confidence 999987 556655532 45555554
No 78
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.1e-27 Score=268.74 Aligned_cols=231 Identities=18% Similarity=0.193 Sum_probs=207.6
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
..+++.|+|++|++++..|..|.++++|++|+|++|+|+++.+..|..+ +|++|+|++|+|++..+..|.++++|++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 3578999999999999999999999999999999999999999999998 999999999999988888999999999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecC-cCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSN-SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
|++|+|++..+..|.++++|++|+|++| .+....+..|.++++|++|+|++|+|++. | .+..+++|++|+|++|+|+
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 231 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFP 231 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCc
Confidence 9999999777778999999999999994 55544445799999999999999999954 4 5889999999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhc
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 328 (845)
+..|..|.++++|+.| +|++|+|++..|..|.++++|+.|+|++|+|++..+..|..
T Consensus 232 ~~~~~~~~~l~~L~~L-----------------------~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 232 EIRPGSFHGLSSLKKL-----------------------WVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp EECGGGGTTCTTCCEE-----------------------ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred ccCcccccCccCCCEE-----------------------EeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 9999999988876665 56667777788888999999999999999999888888999
Q ss_pred CCCcCEEEccCCcccCCC
Q 003134 329 LAKTNFMYLTGNKLTGPV 346 (845)
Q Consensus 329 l~~L~~L~L~~N~l~g~i 346 (845)
+++|+.|+|++|.+.-.-
T Consensus 289 l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CTTCCEEECCSSCEECST
T ss_pred ccCCCEEEccCCCcCCCC
Confidence 999999999999987543
No 79
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=1e-26 Score=266.06 Aligned_cols=267 Identities=19% Similarity=0.160 Sum_probs=222.5
Q ss_pred CCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCC
Q 003134 102 QNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIP 180 (845)
Q Consensus 102 ~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 180 (845)
.+..+..+..++++++|++|+|++|.|++. | .+..+ +|++|+|++|+|++. | ++.+++|++|+|++|+|++. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e
Confidence 344555567889999999999999999986 4 57777 999999999999985 3 89999999999999999974 4
Q ss_pred cccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCC
Q 003134 181 PDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTS 260 (845)
Q Consensus 181 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 260 (845)
++++++|++|+|++|++++ +| +.++++|++|++++|+|++. + ++.+++|++|++++|+..+.+ .++.+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 8999999999999999997 45 89999999999999999974 3 889999999999999776666 5889999
Q ss_pred CCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCC
Q 003134 261 LTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340 (845)
Q Consensus 261 L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 340 (845)
|+.|++++|.++..+.. ...+|+.|++++|++++. .++.+++|+.|+|++|+|++ +| +..+++|++|++++|
T Consensus 172 L~~L~ls~n~l~~l~l~--~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 172 LTTLDCSFNKITELDVS--QNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CCEEECCSSCCCCCCCT--TCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CCEEECCCCccceeccc--cCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 99999999999986522 233899999999999986 48899999999999999997 56 889999999999999
Q ss_pred cccCCCChhhh---------cCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCccCc
Q 003134 341 KLTGPVPKYIF---------NSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHPC 398 (845)
Q Consensus 341 ~l~g~ip~~~~---------~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~~c 398 (845)
++++..+..+. +.++.|++++|.+.+.+|. ..+..++.++.+.|+..+..+|
T Consensus 244 ~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~------~~l~~L~~L~Ls~n~~l~~l~~ 304 (457)
T 3bz5_A 244 PLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQA------EGCRKIKELDVTHNTQLYLLDC 304 (457)
T ss_dssp CCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEEC------TTCTTCCCCCCTTCTTCCEEEC
T ss_pred cCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccc------cccccCCEEECCCCcccceecc
Confidence 99986544332 1456667777776666652 2334567777888877666655
No 80
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=9.2e-27 Score=247.73 Aligned_cols=224 Identities=22% Similarity=0.332 Sum_probs=132.4
Q ss_pred ceeecCCCCcceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCccccccc
Q 003134 82 NVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTN 161 (845)
Q Consensus 82 ~v~C~~~~~~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~ 161 (845)
|+.|+|.. ..+.+++++++++. +|..+. ++|++|+|++|++++ ..+..|.+
T Consensus 9 ~~~C~c~~---~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~-----------------------~~~~~~~~ 59 (270)
T 2o6q_A 9 GGVCSCNN---NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSS-----------------------LPSKAFHR 59 (270)
T ss_dssp TCSBEEET---TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSC-----------------------CCTTSSSS
T ss_pred CCCCEeCC---CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCe-----------------------eCHHHhcC
Confidence 67787642 23456777777663 454443 445555555555544 44445555
Q ss_pred ccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEE
Q 003134 162 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLH 241 (845)
Q Consensus 162 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 241 (845)
+++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 56666666666666544444455566666666666666654445555666666666666666655555555666666666
Q ss_pred ecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCC
Q 003134 242 IQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 321 (845)
Q Consensus 242 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 321 (845)
|++|++++..+..|..+++|+.| +|++|+|++..+..|.++++|++|+|++|+|++.
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L-----------------------~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKEL-----------------------RLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEE-----------------------ECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCCcCCccCHhHccCCccccee-----------------------EecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 66666554444444444443333 3344444444455566677777777777777766
Q ss_pred CchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCC-CceeeeeecC
Q 003134 322 IPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRG-SVNLVESYSS 387 (845)
Q Consensus 322 ~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~-~~~~l~~l~~ 387 (845)
.+..|..+++|+.|+|++| ||.|+|. ..++..|+..
T Consensus 197 ~~~~~~~l~~L~~L~l~~N------------------------------~~~c~c~~~~~~~~~l~~ 233 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQEN------------------------------PWDCTCNGIIYMAKWLKK 233 (270)
T ss_dssp CTTTTTTCTTCCEEECCSS------------------------------CBCCSSSSSHHHHHHHHH
T ss_pred CHHHhccccCCCEEEecCC------------------------------CeeCCCccHHHHHHHHHh
Confidence 6666777777777777666 7778886 4566677654
No 81
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.8e-27 Score=255.22 Aligned_cols=236 Identities=17% Similarity=0.174 Sum_probs=204.1
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCC-CCCCccccccccccccee
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-LSGPFPKVLTNITTLKNL 168 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 168 (845)
..+++.|++++|.+++..+..|.++++|++|+|++|.+++..|..|..+ +|++|+|++|+ ++...|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4578999999999999888899999999999999999999999999998 99999999998 888889999999999999
Q ss_pred EeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 169 SIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 169 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999888999999999999999999999877778999999999999999999877778999999999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhc
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK 328 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 328 (845)
+..|..|.++++|+.| +|++|.|++..+..|..+++|+.|+|++|+++...+.. .-
T Consensus 191 ~~~~~~~~~l~~L~~L-----------------------~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~ 246 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTL-----------------------YLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PL 246 (285)
T ss_dssp EECTTTTTTCTTCCEE-----------------------ECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HH
T ss_pred ccCHhHccCcccccEe-----------------------eCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HH
Confidence 9889998888776666 55566666666777888999999999999988654421 11
Q ss_pred CCCcCEEEccCCcccCCCChhh
Q 003134 329 LAKTNFMYLTGNKLTGPVPKYI 350 (845)
Q Consensus 329 l~~L~~L~L~~N~l~g~ip~~~ 350 (845)
+..++.+..+.|.+....|..+
T Consensus 247 ~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 247 WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHHHCCSEECCCBEEESGGG
T ss_pred HHHHHhcccccCccccCCchHh
Confidence 2234445567777777777665
No 82
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=3.6e-27 Score=269.66 Aligned_cols=246 Identities=19% Similarity=0.235 Sum_probs=134.9
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-c-------------eeEEEecCCCCCCCccc
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-Q-------------LVELSVMGNRLSGPFPK 157 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~-------------L~~L~Ls~N~l~~~~p~ 157 (845)
.+++.+++++|++ |.+|++|++|++|++|+|++|+++|.+|..++.+ + +++|++++|++++. |.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 4788899999999 7899999999999999999999999999888876 4 38888888888863 33
Q ss_pred ccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCccc
Q 003134 158 VLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI 237 (845)
Q Consensus 158 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 237 (845)
. .++|++|+|++|++++ +|.. +++|++|++++|++++ +|.. .++|++|+|++|++++ +| .|+++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 3577778888887775 5543 2566666666666663 2221 1456666666666664 44 36666666
Q ss_pred ceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCC
Q 003134 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN 316 (845)
Q Consensus 238 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 316 (845)
++|++++|++++ +|..+ .+|+.|++++|.+...+ .+... +|+.|++++|++++ +|... ++|++|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 666666666664 33322 35666666666665532 22222 56666666666654 23221 35666666666
Q ss_pred CCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcC
Q 003134 317 NLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW 366 (845)
Q Consensus 317 ~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~ 366 (845)
+++ .+| .+..+++|++|++++|++++ +|. ...+++.|++++|++++
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~-~~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD-LPPSLEALNVRDNYLTD 271 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS-CCTTCCEEECCSSCCSC
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc-cccccCEEECCCCcccc
Confidence 665 444 25566666666666666653 332 22455666666665554
No 83
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.94 E-value=1.8e-27 Score=270.18 Aligned_cols=172 Identities=24% Similarity=0.312 Sum_probs=149.0
Q ss_pred cHHHHHHHhcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEE
Q 003134 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCV 742 (845)
Q Consensus 667 ~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 742 (845)
.+++++...++|+..++||+|+||+||+|+... ++.||+|++++.. ....+.+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 345666667899999999999999999999864 8899999997532 222345889999999999999999999999
Q ss_pred eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEE
Q 003134 743 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 822 (845)
Q Consensus 743 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~ 822 (845)
+.+..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~----~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~ 217 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE----DRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLA 217 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEc
Confidence 9999999999999999999996532 36899999999999999999999987 9999999999999999999999
Q ss_pred eeccceecCCCCceeeeeeccCC
Q 003134 823 DFGLAKLYEEDKTHISTRIAGTM 845 (845)
Q Consensus 823 DFGla~~~~~~~~~~~t~~~GT~ 845 (845)
|||+|+....+.....+..+||+
T Consensus 218 DFGla~~~~~~~~~~~~~~~GT~ 240 (437)
T 4aw2_A 218 DFGSCLKLMEDGTVQSSVAVGTP 240 (437)
T ss_dssp CCTTCEECCTTSCEECCSCCSCG
T ss_pred chhhhhhcccCCCcccccccCCc
Confidence 99999988766555555567774
No 84
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=1.5e-26 Score=248.64 Aligned_cols=216 Identities=22% Similarity=0.170 Sum_probs=133.2
Q ss_pred ccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 112 LSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 112 l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
+.++++|++|++++|.++.+++.. . .+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+ ...+++|++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~-~-~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 81 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDL-P-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGT 81 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCC-C-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCE
T ss_pred ccccCCccEEECCCCCCCcCCCCC-C-CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCE
Confidence 567778888888888887544322 1 256677777777776666677777777777777777764322 256666777
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~ 271 (845)
|+|++|+|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---------------- 144 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL---------------- 144 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT----------------
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhc----------------
Confidence 777777666 555566666666666666666665555566666666666666666554444333
Q ss_pred CCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhh
Q 003134 272 SESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF 351 (845)
Q Consensus 272 ~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~ 351 (845)
..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..++
T Consensus 145 -------------------------------~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~ 192 (290)
T 1p9a_G 145 -------------------------------TPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFF 192 (290)
T ss_dssp -------------------------------TTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTT
T ss_pred -------------------------------ccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhc
Confidence 34444444455555554444444444555555555555554 3444433
Q ss_pred c--CCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 352 N--SNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 352 ~--~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
. .++.|+|++| ||.|+|...++..|+...
T Consensus 193 ~~~~L~~l~L~~N--------p~~C~c~~~~l~~wl~~~ 223 (290)
T 1p9a_G 193 GSHLLPFAFLHGN--------PWLCNCEILYFRRWLQDN 223 (290)
T ss_dssp TTCCCSEEECCSC--------CBCCSGGGHHHHHHHHHT
T ss_pred ccccCCeEEeCCC--------CccCcCccHHHHHHHHhC
Confidence 2 3555666666 889999999999998754
No 85
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1e-25 Score=257.65 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=134.1
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeec
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 172 (845)
+++.|++++|.+++ +| +|+++++|++|++++|++++. |..+ .+|++|++++|++++ +| .++++++|++|++++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~~--~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKL-PDLP--PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADN 204 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCC-CCCC--TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCS
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCccc-CCCc--ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCC
Confidence 34455555555553 34 355555555555555555542 2211 145555555555554 23 355555555555555
Q ss_pred ccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
|++++ +|... ++|++|++++|+++ .+|. +.++++|++|++++|++++ +|.. +++|++|++++|++++ +|
T Consensus 205 N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~ 273 (454)
T 1jl5_A 205 NSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP 273 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC
T ss_pred CcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC
Confidence 55553 33221 34555555555555 3442 5555555555555555553 3321 2455555555555554 23
Q ss_pred hhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCC-CCcCEEeCCCCCCCCCCchhhhcCCC
Q 003134 253 ASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAK 331 (845)
Q Consensus 253 ~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~ 331 (845)
.. +++|+.|++++|.+++.+. + ..+|+.|++++|++++. ..+ ++|+.|+|++|++++ +|.. +++
T Consensus 274 ~~---~~~L~~L~ls~N~l~~l~~--~-~~~L~~L~l~~N~l~~i-----~~~~~~L~~L~Ls~N~l~~-lp~~---~~~ 338 (454)
T 1jl5_A 274 EL---PQSLTFLDVSENIFSGLSE--L-PPNLYYLNASSNEIRSL-----CDLPPSLEELNVSNNKLIE-LPAL---PPR 338 (454)
T ss_dssp CC---CTTCCEEECCSSCCSEESC--C-CTTCCEEECCSSCCSEE-----CCCCTTCCEEECCSSCCSC-CCCC---CTT
T ss_pred cc---cCcCCEEECcCCccCcccC--c-CCcCCEEECcCCcCCcc-----cCCcCcCCEEECCCCcccc-cccc---CCc
Confidence 22 2455555555555554211 0 02566666666666542 123 478888888888885 5543 578
Q ss_pred cCEEEccCCcccCCCChhhhcCCceEEeecCCCcC--CCCCCC
Q 003134 332 TNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTW--ESSDPI 372 (845)
Q Consensus 332 L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~--~~p~~~ 372 (845)
|++|++++|+++ .+|. ....++.|++++|++++ .+|..+
T Consensus 339 L~~L~L~~N~l~-~lp~-~l~~L~~L~L~~N~l~~l~~ip~~l 379 (454)
T 1jl5_A 339 LERLIASFNHLA-EVPE-LPQNLKQLHVEYNPLREFPDIPESV 379 (454)
T ss_dssp CCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred CCEEECCCCccc-cccc-hhhhccEEECCCCCCCcCCCChHHH
Confidence 888888888888 4666 56788888888888888 555443
No 86
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.94 E-value=1.3e-26 Score=253.30 Aligned_cols=181 Identities=44% Similarity=0.810 Sum_probs=155.6
Q ss_pred cCcccHHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEE
Q 003134 663 TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCC 741 (845)
Q Consensus 663 ~~~~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 741 (845)
...++++++....++|...+.||+|+||.||+|+..+++.||||++..... ....++.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 356888999999999999999999999999999988899999999976532 2344789999999999999999999999
Q ss_pred EeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEE
Q 003134 742 VEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 742 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl 821 (845)
...+..++||||+++|+|.+++..... ....+++..+..|+.|++.||+|||+++.++|+||||||+|||++.++.+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999976532 2346999999999999999999999983334999999999999999999999
Q ss_pred EeeccceecCCCCceeeeeeccC
Q 003134 822 SDFGLAKLYEEDKTHISTRIAGT 844 (845)
Q Consensus 822 ~DFGla~~~~~~~~~~~t~~~GT 844 (845)
+|||+|+..............||
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt 198 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGT 198 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSC
T ss_pred ccCccccccCcccccccccccCC
Confidence 99999998865555444445565
No 87
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=8.6e-28 Score=261.93 Aligned_cols=245 Identities=17% Similarity=0.121 Sum_probs=214.8
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+ +|++|+|++|+|++.. ..++|++|+|
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEEC
Confidence 478999999999999888899999999999999999998765 7777 9999999999998543 4489999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhc-CCcccceEEecCCcCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG-KWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g 249 (845)
++|++++..+. .+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+. .+++|++|+|++|++++
T Consensus 107 ~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 99999966544 368899999999999988888899999999999999999988887774 78999999999999996
Q ss_pred CcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCC-CCCchhhhc
Q 003134 250 PIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTFEK 328 (845)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~~ 328 (845)
. + ....+++|+.|++++|.++..+.......+|+.|+|++|+|++ +|..+..+++|+.|+|++|+++ +.+|..+..
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~ 260 (317)
T 3o53_A 184 V-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (317)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHT
T ss_pred c-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhc
Confidence 6 3 2335899999999999999876664444599999999999995 6888999999999999999999 888999999
Q ss_pred CCCcCEEEcc-CCcccCCCChh
Q 003134 329 LAKTNFMYLT-GNKLTGPVPKY 349 (845)
Q Consensus 329 l~~L~~L~L~-~N~l~g~ip~~ 349 (845)
+++|+.|+++ .+.++|..|..
T Consensus 261 ~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 261 NQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp CHHHHHHHHHHHHHHHSSSSCC
T ss_pred cccceEEECCCchhccCCchhc
Confidence 9999999998 55677766654
No 88
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.93 E-value=1.1e-26 Score=261.66 Aligned_cols=169 Identities=24% Similarity=0.344 Sum_probs=146.1
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 743 (845)
+++++...++|+..+.||+|+||.||+|+.. +++.||+|++++. .....+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 4455566789999999999999999999986 4889999999653 12334568899999999999999999999999
Q ss_pred CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEe
Q 003134 744 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISD 823 (845)
Q Consensus 744 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~D 823 (845)
.+..|+||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~D 211 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLAD 211 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEec
Confidence 99999999999999999998542 5899999999999999999999997 99999999999999999999999
Q ss_pred eccceecCCCCceeeeeeccCC
Q 003134 824 FGLAKLYEEDKTHISTRIAGTM 845 (845)
Q Consensus 824 FGla~~~~~~~~~~~t~~~GT~ 845 (845)
||+|+.+...........+||+
T Consensus 212 FG~a~~~~~~~~~~~~~~~gt~ 233 (410)
T 3v8s_A 212 FGTCMKMNKEGMVRCDTAVGTP 233 (410)
T ss_dssp CTTCEECCTTSEEECCSCCSCG
T ss_pred cceeEeeccCCcccccCCcCCc
Confidence 9999988765544444566764
No 89
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.93 E-value=1.8e-26 Score=251.65 Aligned_cols=161 Identities=47% Similarity=0.837 Sum_probs=144.4
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
+.++..++++|+..+.||+|+||.||+|++.+++.||+|++........+++.+|++++++++||||+++++++...+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 33445577899999999999999999999888999999999877666678899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++|+|.+++..... ....+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDL-PTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHhccCC-CccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccc
Confidence 999999999999999965432 2346899999999999999999999987 999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+....
T Consensus 187 ~~~~~ 191 (321)
T 2qkw_B 187 KKGTE 191 (321)
T ss_dssp EECSS
T ss_pred ccccc
Confidence 87653
No 90
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.93 E-value=7.8e-26 Score=244.02 Aligned_cols=152 Identities=26% Similarity=0.531 Sum_probs=138.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 457999999999999999999964 6899999999876666678899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
+++|+|.+++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999998543 5899999999999999999999997 999999999999999999999999999987654
Q ss_pred Cc
Q 003134 834 KT 835 (845)
Q Consensus 834 ~~ 835 (845)
..
T Consensus 170 ~~ 171 (297)
T 3fxz_A 170 QS 171 (297)
T ss_dssp TC
T ss_pred cc
Confidence 43
No 91
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.93 E-value=8.8e-26 Score=246.47 Aligned_cols=163 Identities=31% Similarity=0.518 Sum_probs=144.5
Q ss_pred ccCcccHHHHHHHhcC----------CCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC
Q 003134 662 QTGLYTLRQIKAATNN----------FDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ 730 (845)
Q Consensus 662 ~~~~~~~~~l~~~~~~----------y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 730 (845)
+.+.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence 3456788888887764 566778999999999999986 69999999998766666788999999999999
Q ss_pred CCceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCC
Q 003134 731 HPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSN 810 (845)
Q Consensus 731 H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~N 810 (845)
||||+++++++...+..++||||+++|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+|
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~N 171 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDS 171 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGG
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHH
Confidence 999999999999999999999999999999998532 5899999999999999999999987 9999999999
Q ss_pred EEecCCCcEEEEeeccceecCCC
Q 003134 811 VLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 811 ILld~~~~~kl~DFGla~~~~~~ 833 (845)
||++.++.+||+|||+++.....
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~ 194 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKD 194 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSS
T ss_pred EEECCCCcEEEeeeeeeeecccC
Confidence 99999999999999999987654
No 92
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.93 E-value=6.5e-26 Score=245.94 Aligned_cols=151 Identities=30% Similarity=0.572 Sum_probs=137.1
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
++|...+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56778899999999999999985 58999999987766666788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
++|+|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 90 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 90 KGGTLRGIIKSMD----SQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp TTCBHHHHHHHCC----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred CCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999996532 36899999999999999999999997 999999999999999999999999999987543
No 93
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=261.01 Aligned_cols=172 Identities=24% Similarity=0.288 Sum_probs=147.7
Q ss_pred cHHHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEE
Q 003134 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCV 742 (845)
Q Consensus 667 ~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 742 (845)
.+++.....++|+..+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|.+++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 44555566789999999999999999999985 68999999997532 223345889999999999999999999999
Q ss_pred eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEE
Q 003134 743 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 822 (845)
Q Consensus 743 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~ 822 (845)
+.+..|+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFG----ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEe
Confidence 9999999999999999999996431 36899999999999999999999987 9999999999999999999999
Q ss_pred eeccceecCCCCceeeeeeccCC
Q 003134 823 DFGLAKLYEEDKTHISTRIAGTM 845 (845)
Q Consensus 823 DFGla~~~~~~~~~~~t~~~GT~ 845 (845)
|||+|+.+..+........+||+
T Consensus 205 DFGla~~~~~~~~~~~~~~~Gt~ 227 (412)
T 2vd5_A 205 DFGSCLKLRADGTVRSLVAVGTP 227 (412)
T ss_dssp CCTTCEECCTTSCEECSSCCSCG
T ss_pred echhheeccCCCccccceecccc
Confidence 99999988765544444456764
No 94
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.9e-27 Score=271.08 Aligned_cols=236 Identities=16% Similarity=0.107 Sum_probs=210.3
Q ss_pred cceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 91 TCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.|++..| +..+ +|++|+|++|.|++..+ .++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEE
Confidence 3479999999999999888899999999999999999998776 7777 99999999999996543 38999999
Q ss_pred eecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhc-CCcccceEEecCCcCC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG-KWKKIQKLHIQGSSLE 248 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~ 248 (845)
|++|+|++..+. .+++|++|+|++|+|++..|..|+++++|++|+|++|+|++.+|..+. .+++|++|+|++|.|+
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976554 468999999999999999899999999999999999999998898886 7999999999999999
Q ss_pred CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCC-CCCchhhh
Q 003134 249 GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT-GGIPTTFE 327 (845)
Q Consensus 249 g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~~p~~~~ 327 (845)
+..+ +..+++|+.|+|++|.+++.++......+|+.|+|++|.|++ +|..+..+++|+.|+|++|.+. +.+|..+.
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred cccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 7633 346999999999999999877664445599999999999996 6778999999999999999998 78888899
Q ss_pred cCCCcCEEEccC
Q 003134 328 KLAKTNFMYLTG 339 (845)
Q Consensus 328 ~l~~L~~L~L~~ 339 (845)
.++.|+.|+++.
T Consensus 260 ~l~~L~~l~~~~ 271 (487)
T 3oja_A 260 KNQRVQTVAKQT 271 (487)
T ss_dssp TCHHHHHHHHHH
T ss_pred hCCCCcEEeccc
Confidence 999999888863
No 95
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.2e-25 Score=239.85 Aligned_cols=208 Identities=20% Similarity=0.213 Sum_probs=184.0
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
..++.|++++|.+++..+..|.++++|++|+|++|++++..+..|..+ +|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 468999999999998888899999999999999999999999899988 9999999999999998999999999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCccc-CChhhhCCCCCCcEEeecCcCcccCchhhcCCcccc----eEEecCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGE-LPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQ----KLHIQGS 245 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 245 (845)
++|++++..+..+.++++|++|+|++|++++. +|..|.++++|++|+|++|++++..+..|..+++|+ +|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999988777899999999999999999974 699999999999999999999988888888877777 7788888
Q ss_pred cCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCc
Q 003134 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIP 323 (845)
Q Consensus 246 ~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 323 (845)
++++..+..+. ..+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 188 ~l~~~~~~~~~------------------------~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFK------------------------EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSC------------------------SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccC------------------------CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 87754443332 2257777888888888777788999999999999999996543
No 96
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=7.3e-26 Score=267.14 Aligned_cols=260 Identities=25% Similarity=0.286 Sum_probs=202.0
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEee
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 171 (845)
.++.|++++++|+ .+|..+. ++|++|+|++|+|+.+.+ .+ +|++|+|++|+|++ +|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 5789999999999 7788776 899999999999996544 34 89999999999985 454 67999999999
Q ss_pred cccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCc
Q 003134 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPI 251 (845)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 251 (845)
+|+|++ +|. .+++|++|+|++|+|++ +|.. +++|++|+|++|+|++ +|. .+++|+.|++++|+|++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 999995 454 57889999999999995 5653 4899999999999985 454 34678899999999986 4
Q ss_pred chhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCC
Q 003134 252 PASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAK 331 (845)
Q Consensus 252 p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~ 331 (845)
| ..+++|+.|++++|.++..+.. ..+|+.|++++|.|+. +|. .+++|+.|+|++|+|++ +| ..+++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~ 242 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSE 242 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred c---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCc
Confidence 4 4568899999999988865432 2478888888888884 443 24788888999888885 55 45678
Q ss_pred cCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCCCccC
Q 003134 332 TNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLDKVHP 397 (845)
Q Consensus 332 L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~~~~~ 397 (845)
|+.|+|++|+|+ .+|. ...+|+.|+|++|+++ .+|..+ ..+..+..++.+.|++++..+
T Consensus 243 L~~L~Ls~N~L~-~lp~-~~~~L~~L~Ls~N~L~-~lp~~l----~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 243 LKELMVSGNRLT-SLPM-LPSGLLSLSVYRNQLT-RLPESL----IHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp CCEEECCSSCCS-CCCC-CCTTCCEEECCSSCCC-SCCGGG----GGSCTTCEEECCSCCCCHHHH
T ss_pred CcEEECCCCCCC-cCCc-ccccCcEEeCCCCCCC-cCCHHH----hhccccCEEEecCCCCCCcCH
Confidence 888888888888 4665 5567888888888888 445333 233446677788888876543
No 97
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.93 E-value=8e-26 Score=249.21 Aligned_cols=162 Identities=23% Similarity=0.393 Sum_probs=133.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 467889999999999999999974 68999999986543 2334678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 89 ~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 89 YCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999998543 36899999999999999999999997 99999999999999999999999999987754
Q ss_pred CCceeeeeeccC
Q 003134 833 DKTHISTRIAGT 844 (845)
Q Consensus 833 ~~~~~~t~~~GT 844 (845)
..........||
T Consensus 161 ~~~~~~~~~~gt 172 (347)
T 3zgw_A 161 NKDYHLQTCCGS 172 (347)
T ss_dssp -----------C
T ss_pred CCCccccccCCc
Confidence 433333334455
No 98
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.92 E-value=1.4e-25 Score=246.42 Aligned_cols=160 Identities=30% Similarity=0.372 Sum_probs=138.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999986 5899999999764 2344567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+...
T Consensus 85 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 85 EYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp ECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999998542 36899999999999999999999997 9999999999999999999999999998754
Q ss_pred CCCceeeeeeccC
Q 003134 832 EDKTHISTRIAGT 844 (845)
Q Consensus 832 ~~~~~~~t~~~GT 844 (845)
..... ....+||
T Consensus 157 ~~~~~-~~~~~gt 168 (337)
T 1o6l_A 157 SDGAT-MKTFCGT 168 (337)
T ss_dssp CTTCC-BCCCEEC
T ss_pred cCCCc-ccccccC
Confidence 33222 2234555
No 99
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.92 E-value=1e-25 Score=246.59 Aligned_cols=151 Identities=26% Similarity=0.458 Sum_probs=135.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|++ .+|+.||||++.... ....+++.+|++++++++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999998 469999999996542 234567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999998543 36899999999999999999999997 9999999999999999999999999998775
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 166 ~~ 167 (328)
T 3fe3_A 166 VG 167 (328)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 100
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.92 E-value=1.4e-25 Score=247.90 Aligned_cols=163 Identities=28% Similarity=0.436 Sum_probs=135.7
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 748 (845)
..++|+..+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|.+++..+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3468999999999999999999986 5899999999764 233456788999999988 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+
T Consensus 101 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEcccccee
Confidence 999999999999998543 36899999999999999999999997 9999999999999999999999999998
Q ss_pred ecCCCCceeeeeeccCC
Q 003134 829 LYEEDKTHISTRIAGTM 845 (845)
Q Consensus 829 ~~~~~~~~~~t~~~GT~ 845 (845)
....... .....+||+
T Consensus 173 ~~~~~~~-~~~~~~gt~ 188 (353)
T 3txo_A 173 EGICNGV-TTATFCGTP 188 (353)
T ss_dssp CSCC----------CCG
T ss_pred ecccCCc-cccccCCCc
Confidence 7543322 223455663
No 101
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.92 E-value=1.7e-25 Score=240.97 Aligned_cols=162 Identities=30% Similarity=0.408 Sum_probs=134.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc---cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+++.+|++++++++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357889999999999999999975 589999999854322 3346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.+
T Consensus 90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 9999999999999543 36899999999999999999999997 999999999999999999999999999877
Q ss_pred CCCCceeeeeeccC
Q 003134 831 EEDKTHISTRIAGT 844 (845)
Q Consensus 831 ~~~~~~~~t~~~GT 844 (845)
............||
T Consensus 162 ~~~~~~~~~~~~gt 175 (294)
T 4eqm_A 162 SETSLTQTNHVLGT 175 (294)
T ss_dssp -------------C
T ss_pred ccccccccCccccC
Confidence 55433333334455
No 102
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.92 E-value=8.1e-25 Score=236.73 Aligned_cols=166 Identities=44% Similarity=0.707 Sum_probs=147.3
Q ss_pred ccCcccHHHHHHHhcCCCCC------CcccccCcEEEEEEEECCCcEEEEEEcCccc----ccchHHHHHHHHHHhcCCC
Q 003134 662 QTGLYTLRQIKAATNNFDPA------NKVGEGGFGSVYKGILSDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQH 731 (845)
Q Consensus 662 ~~~~~~~~~l~~~~~~y~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H 731 (845)
....+++.++..++++|... +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34668999999999999887 8999999999999987 58899999986532 2335688999999999999
Q ss_pred CceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCE
Q 003134 732 PNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNV 811 (845)
Q Consensus 732 ~nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NI 811 (845)
|||+++++++...+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+++ |+||||||+||
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Ni 164 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANI 164 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHE
Confidence 999999999999999999999999999999996532 2346899999999999999999999987 99999999999
Q ss_pred EecCCCcEEEEeeccceecCCC
Q 003134 812 LLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 812 Lld~~~~~kl~DFGla~~~~~~ 833 (845)
+++.++.+||+|||+++.....
T Consensus 165 li~~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 165 LLDEAFTAKISDFGLARASEKF 186 (307)
T ss_dssp EECTTCCEEECCCTTCEECCSC
T ss_pred EEcCCCcEEEeecccccccccc
Confidence 9999999999999999987653
No 103
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.7e-25 Score=236.62 Aligned_cols=203 Identities=19% Similarity=0.260 Sum_probs=124.8
Q ss_pred cccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceE
Q 003134 161 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240 (845)
Q Consensus 161 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (845)
.+++|+.|++++|.++. + +.+..+++|++|+|++|++++. ..+.++++|++|+|++|++++..+..|.++++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 34444444444444441 1 1244444444444444444431 234444444444444444444444444444444444
Q ss_pred EecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCC
Q 003134 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (845)
Q Consensus 241 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 319 (845)
+|++|++++..+..|+++++|+.|++++|.++..+...+... +|+.|+|++|+|++..+..|..+++|++|+|++|+++
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 444444444444444444444444444444444433333222 5666677778888777778889999999999999999
Q ss_pred CCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCC
Q 003134 320 GGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPI 372 (845)
Q Consensus 320 g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~ 372 (845)
+..|..|..+++|++|+|++|++++..| .++.|+++.|.++|.+|..+
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~-----~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCP-----GIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT-----TTHHHHHHHHHTGGGBBCTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCc-----HHHHHHHHHHhCCCcccCcc
Confidence 8888889999999999999999988766 57788889999999988544
No 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.92 E-value=4.1e-25 Score=241.33 Aligned_cols=154 Identities=24% Similarity=0.459 Sum_probs=133.6
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC-------
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------- 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 745 (845)
.++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888999999999999999986 69999999997543 334578999999999999999999999986543
Q ss_pred --------------------------------------------------EEEEEEeccCCCChhhhhhcCCcccccCCC
Q 003134 746 --------------------------------------------------QLLLVYEYMKNNCLSRAIFGKDTEYRLKLD 775 (845)
Q Consensus 746 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~ 775 (845)
..++||||+++|+|.+++..... ....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~ 162 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDRE 162 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSC
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchh
Confidence 38999999999999999976532 23567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 776 WPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 776 ~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
+..+++++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 217 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 217 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence 7889999999999999999987 999999999999999999999999999988654
No 105
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.92 E-value=3.9e-25 Score=234.33 Aligned_cols=152 Identities=30% Similarity=0.569 Sum_probs=137.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
.++|+..+.||+|+||.||+|...++..||+|+++... ...+++.+|++++.+++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 45788899999999999999999888899999997653 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
++++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 86 SNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp TTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred CCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999543 235899999999999999999999997 9999999999999999999999999999876544
No 106
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.92 E-value=3.1e-25 Score=242.61 Aligned_cols=152 Identities=30% Similarity=0.545 Sum_probs=133.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCcc-cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|...+.||+|+||.||+|++. .+..||||+++.. .....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46778899999999999999984 3557999999765 233456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+
T Consensus 129 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD----GQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred eeCCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999996542 36899999999999999999999997 999999999999999999999999999988
Q ss_pred CCCC
Q 003134 831 EEDK 834 (845)
Q Consensus 831 ~~~~ 834 (845)
....
T Consensus 202 ~~~~ 205 (325)
T 3kul_A 202 EDDP 205 (325)
T ss_dssp C---
T ss_pred ccCc
Confidence 6543
No 107
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.92 E-value=2.5e-25 Score=249.24 Aligned_cols=162 Identities=26% Similarity=0.370 Sum_probs=137.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 749 (845)
.++|+..++||+|+||.||+|+.. +++.||+|++++.. ....+.+..|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 356888999999999999999986 48899999997653 22334678899999876 89999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|..++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.
T Consensus 131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeee
Confidence 99999999999998542 36899999999999999999999997 99999999999999999999999999987
Q ss_pred cCCCCceeeeeeccCC
Q 003134 830 YEEDKTHISTRIAGTM 845 (845)
Q Consensus 830 ~~~~~~~~~t~~~GT~ 845 (845)
...... .....+||+
T Consensus 203 ~~~~~~-~~~~~~gt~ 217 (396)
T 4dc2_A 203 GLRPGD-TTSTFCGTP 217 (396)
T ss_dssp CCCTTC-CBCCCCBCG
T ss_pred cccCCC-ccccccCCc
Confidence 433322 233456663
No 108
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=1.6e-25 Score=237.61 Aligned_cols=149 Identities=29% Similarity=0.594 Sum_probs=135.6
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccC
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~ 755 (845)
++|+..+.||+|+||.||+|++.+++.||+|++... ....+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 568888999999999999999988999999999765 3345789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 756 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 756 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 89 HGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp TCBHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred CCcHHHHHHhcC----cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccc
Confidence 999999996542 36899999999999999999999997 99999999999999999999999999987643
No 109
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.92 E-value=4.8e-25 Score=240.21 Aligned_cols=149 Identities=28% Similarity=0.457 Sum_probs=134.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999986 58999999997642 234567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 86 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 86 DYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp CCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999643 36899999999999999999999987 9999999999999999999999999999875
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 158 ~ 158 (318)
T 1fot_A 158 D 158 (318)
T ss_dssp S
T ss_pred C
Confidence 4
No 110
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=9.9e-25 Score=238.13 Aligned_cols=152 Identities=20% Similarity=0.327 Sum_probs=135.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467889999999999999999986 5889999998754 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC--CCcEEEEeeccceecC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLYE 831 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~--~~~~kl~DFGla~~~~ 831 (845)
+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++. ++.+||+|||+++.+.
T Consensus 83 ~~g~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 83 ISGLDIFERINTSA----FELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCBHHHHHTSSS----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999996532 36899999999999999999999997 999999999999987 7899999999999886
Q ss_pred CCC
Q 003134 832 EDK 834 (845)
Q Consensus 832 ~~~ 834 (845)
...
T Consensus 156 ~~~ 158 (321)
T 1tki_A 156 PGD 158 (321)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 111
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.92 E-value=3.7e-25 Score=247.04 Aligned_cols=159 Identities=25% Similarity=0.446 Sum_probs=139.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999976 48899999986542 344578899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.
T Consensus 95 e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp CCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999653 36899999999999999999999997 9999999999999999999999999999875
Q ss_pred CCCceeeeeeccC
Q 003134 832 EDKTHISTRIAGT 844 (845)
Q Consensus 832 ~~~~~~~t~~~GT 844 (845)
.... .+...||
T Consensus 167 ~~~~--~~~~~gt 177 (384)
T 4fr4_A 167 RETQ--ITTMAGT 177 (384)
T ss_dssp TTCC--BCCCCSC
T ss_pred CCCc--eeccCCC
Confidence 4322 2334555
No 112
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.92 E-value=3.5e-25 Score=243.96 Aligned_cols=164 Identities=29% Similarity=0.416 Sum_probs=138.9
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 746 (845)
....++|...+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445678999999999999999999986 58999999997642 33456788899999876 99999999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChh
Confidence 99999999999999998542 36899999999999999999999997 99999999999999999999999999
Q ss_pred ceecCCCCceeeeeeccC
Q 003134 827 AKLYEEDKTHISTRIAGT 844 (845)
Q Consensus 827 a~~~~~~~~~~~t~~~GT 844 (845)
|+....... .....+||
T Consensus 165 a~~~~~~~~-~~~~~~gt 181 (345)
T 1xjd_A 165 CKENMLGDA-KTNTFCGT 181 (345)
T ss_dssp CBCCCCTTC-CBCCCCSC
T ss_pred hhhcccCCC-cccCCCCC
Confidence 987543222 22345565
No 113
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.92 E-value=8.1e-25 Score=242.58 Aligned_cols=151 Identities=25% Similarity=0.376 Sum_probs=135.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc------chHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
.++|+..+.||+|+||.||+|+.. +|+.||+|.++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457889999999999999999986 5899999999764321 357899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC----cEEEEe
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISD 823 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~----~~kl~D 823 (845)
++||||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++ .+||+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999543 36899999999999999999999987 99999999999998877 799999
Q ss_pred eccceecCCC
Q 003134 824 FGLAKLYEED 833 (845)
Q Consensus 824 FGla~~~~~~ 833 (845)
||+++.+...
T Consensus 163 FG~a~~~~~~ 172 (361)
T 2yab_A 163 FGLAHEIEDG 172 (361)
T ss_dssp CSSCEECCTT
T ss_pred cCCceEcCCC
Confidence 9999987653
No 114
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.92 E-value=4.5e-27 Score=269.48 Aligned_cols=274 Identities=19% Similarity=0.218 Sum_probs=205.4
Q ss_pred eEEEEEecCCCccc----cCCccccCCCCCCEEeccCCcccCCCcccccc-----c-ceeEEEecCCCCCCCc----ccc
Q 003134 93 HVVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWAS-----L-QLVELSVMGNRLSGPF----PKV 158 (845)
Q Consensus 93 ~v~~L~l~~~~l~g----~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~-----l-~L~~L~Ls~N~l~~~~----p~~ 158 (845)
+++.|+|++|.++. .++..|..+++|++|+|++|.+++..+..+.. . +|++|+|++|++++.. +..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 68888888888883 56788888888888888888887655544432 2 6888888888888643 556
Q ss_pred cccccccceeEeecccCCCCCCccccc-----CCCccEEEeecCcCccc----CChhhhCCCCCCcEEeecCcCcccC--
Q 003134 159 LTNITTLKNLSIEGNLFTGSIPPDIRK-----LINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGKI-- 227 (845)
Q Consensus 159 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~-- 227 (845)
+..+++|++|+|++|.+++..+..+.. +++|++|+|++|++++. ++..+..+++|++|+|++|+++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 667788888888888887544444432 56888888888888863 5677778888888999888887543
Q ss_pred ---chhhcCCcccceEEecCCcCCCC----cchhhhcCCCCCEEEcCCCCCCCCCCccccc------CCccEEEccCCcC
Q 003134 228 ---PEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFPKLDK------MNLKTLILTKCLI 294 (845)
Q Consensus 228 ---p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~------~~L~~L~Ls~N~l 294 (845)
+..+..+++|++|+|++|+++.. ++..+.++++|+.|++++|.++......+.. .+|+.|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 23334578888899988888864 6777778888889998888876543332221 2788889988888
Q ss_pred ccc----CcccccCCCCcCEEeCCCCCCCCCCchhhhc-----CCCcCEEEccCCcccC----CCChhh--hcCCceEEe
Q 003134 295 HGE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEK-----LAKTNFMYLTGNKLTG----PVPKYI--FNSNKNVDI 359 (845)
Q Consensus 295 ~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~L~~N~l~g----~ip~~~--~~~l~~L~l 359 (845)
++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..+ ...|+.|++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 876 4666777888889999988888665655553 6788889999888886 566665 357888888
Q ss_pred ecCCCcC
Q 003134 360 SLNNFTW 366 (845)
Q Consensus 360 s~N~l~~ 366 (845)
++|++++
T Consensus 406 ~~N~i~~ 412 (461)
T 1z7x_W 406 SNNCLGD 412 (461)
T ss_dssp CSSSCCH
T ss_pred CCCCCCH
Confidence 8887764
No 115
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.92 E-value=4.8e-25 Score=243.04 Aligned_cols=160 Identities=27% Similarity=0.380 Sum_probs=137.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc---cchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|.+++.++ +||||+++++++...+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46888999999999999999986 589999999976532 2345678899999987 899999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++... ..+++.+++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+..
T Consensus 89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999998542 36899999999999999999999997 999999999999999999999999999875
Q ss_pred CCCCceeeeeeccC
Q 003134 831 EEDKTHISTRIAGT 844 (845)
Q Consensus 831 ~~~~~~~~t~~~GT 844 (845)
..... .....+||
T Consensus 161 ~~~~~-~~~~~~gt 173 (345)
T 3a8x_A 161 LRPGD-TTSTFCGT 173 (345)
T ss_dssp CCTTC-CBCCCCSC
T ss_pred cCCCC-cccccCCC
Confidence 43322 22334565
No 116
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.92 E-value=4.2e-25 Score=241.26 Aligned_cols=150 Identities=33% Similarity=0.496 Sum_probs=132.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357889999999999999999986 689999999865432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 86 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999998543 35899999999999999999999987 99999999999999999999999999987753
No 117
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.92 E-value=2.4e-25 Score=248.15 Aligned_cols=151 Identities=32% Similarity=0.579 Sum_probs=127.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|+..+.||+|+||.||+|++. ++..||||+++... ....++|.+|++++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57889999999999999999864 47789999997653 33456899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.++++... ..+++.+++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 125 ~e~~~~~sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHD----AQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EECCTTCBHHHHHHTTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999996542 36899999999999999999999987 999999999999999999999999999987
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 198 ~~~ 200 (373)
T 2qol_A 198 EDD 200 (373)
T ss_dssp ---
T ss_pred ccC
Confidence 654
No 118
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=236.60 Aligned_cols=222 Identities=20% Similarity=0.241 Sum_probs=134.3
Q ss_pred CCCEEeccCCcccCCCccc----ccccceeEEEecCCCCCCCccccc--ccccccceeEeecccCCCCCC----cccccC
Q 003134 117 YLKQLDLSRNCLTGSFSPQ----WASLQLVELSVMGNRLSGPFPKVL--TNITTLKNLSIEGNLFTGSIP----PDIRKL 186 (845)
Q Consensus 117 ~L~~L~Ls~N~l~~~~~~~----~~~l~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l 186 (845)
.++.|.+.++.++...-.. +...+|++|+|++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4667777776665321111 111157777777777777777776 777777888888777776555 234567
Q ss_pred CCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCccc--Cc--hhhcCCcccceEEecCCcCCCCcc--h-hhhcCC
Q 003134 187 INLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGK--IP--EFIGKWKKIQKLHIQGSSLEGPIP--A-SISALT 259 (845)
Q Consensus 187 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~--~p--~~~~~l~~L~~L~Ls~N~l~g~~p--~-~~~~l~ 259 (845)
++|++|+|++|++++..|..|.++++|++|+|++|++.+. ++ ..+..+++|++|+|++|+++...+ . .+++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 7777777777777776677777777777777777777642 21 223567777777777777763211 1 246667
Q ss_pred CCCEEEcCCCCCCCCCCccccc----CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEE
Q 003134 260 SLTDLRISDLKGSESAFPKLDK----MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFM 335 (845)
Q Consensus 260 ~L~~L~Ls~n~~~~~~~~~l~~----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 335 (845)
+|+.|+|++|.+....+..+.. .+|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 7777766666665553322222 15555555555555 3444442 4555555555555543 22 4455555555
Q ss_pred EccCCccc
Q 003134 336 YLTGNKLT 343 (845)
Q Consensus 336 ~L~~N~l~ 343 (845)
+|++|+|+
T Consensus 300 ~L~~N~l~ 307 (310)
T 4glp_A 300 TLDGNPFL 307 (310)
T ss_dssp ECSSTTTS
T ss_pred ECcCCCCC
Confidence 55555554
No 119
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.92 E-value=2.9e-25 Score=246.80 Aligned_cols=166 Identities=19% Similarity=0.196 Sum_probs=137.9
Q ss_pred HhcCCCCCCcccccCcEEEEEEE------ECCCcEEEEEEcCcccccchHHHHHHHHHHhcCC---CCceeeEEEEEEeC
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGI------LSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEG 744 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~ 744 (845)
..++|...+.||+|+||.||+|. ..+++.||+|+++.. ...++..|++++.+++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 345889999999754 3467788888888886 99999999999999
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---------
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--------- 815 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~--------- 815 (845)
+..++||||+++|+|.+++..........+++.+++.|+.||+.||+|||+++ |+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 99999999999999999996532222346999999999999999999999987 999999999999998
Q ss_pred --CCcEEEEeeccceecCC-CCceeeeeeccCC
Q 003134 816 --DLNAKISDFGLAKLYEE-DKTHISTRIAGTM 845 (845)
Q Consensus 816 --~~~~kl~DFGla~~~~~-~~~~~~t~~~GT~ 845 (845)
++.+||+|||+|+.+.. ......+..+||+
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~ 249 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETS 249 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTT
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCC
Confidence 89999999999987642 2223334456663
No 120
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=4.9e-25 Score=234.68 Aligned_cols=206 Identities=22% Similarity=0.210 Sum_probs=122.4
Q ss_pred ccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCcc
Q 003134 112 LSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQ 190 (845)
Q Consensus 112 l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 190 (845)
+..+++|+.|++++|.++... .+..+ +|++|+|++|++++. ..+.++++|++|+|++|++++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 344556666666666555321 23333 455555555555432 2444455555555555555544444444555555
Q ss_pred EEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCC
Q 003134 191 KLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (845)
Q Consensus 191 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~ 270 (845)
+|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++..+..+++++
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~----------- 181 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT----------- 181 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----------
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCc-----------
Confidence 555555555544444444555555555555555544444444455555555555555444444444444
Q ss_pred CCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh
Q 003134 271 GSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350 (845)
Q Consensus 271 ~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~ 350 (845)
+|+.|+|++|++++..|..|..+++|+.|+|++|.+.+. +++|++|++..|+++|.+|..+
T Consensus 182 ------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 182 ------------QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp ------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred ------------cCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcc
Confidence 566667788888888888899999999999999999865 4578899999999999999875
Q ss_pred h
Q 003134 351 F 351 (845)
Q Consensus 351 ~ 351 (845)
.
T Consensus 243 ~ 243 (272)
T 3rfs_A 243 G 243 (272)
T ss_dssp S
T ss_pred c
Confidence 3
No 121
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.92 E-value=6.8e-25 Score=242.42 Aligned_cols=162 Identities=27% Similarity=0.358 Sum_probs=138.8
Q ss_pred HhcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccc---ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 748 (845)
..++|+..+.||+|+||.||+|+... ++.||+|+++... ....+.+..|.+++..+ +||||+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34679999999999999999999864 8899999997642 34456788999999988 8999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++|+|.+++... ..+++.+++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+
T Consensus 98 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 999999999999998542 36899999999999999999999997 9999999999999999999999999998
Q ss_pred ecCCCCceeeeeeccC
Q 003134 829 LYEEDKTHISTRIAGT 844 (845)
Q Consensus 829 ~~~~~~~~~~t~~~GT 844 (845)
....... .....+||
T Consensus 170 ~~~~~~~-~~~~~~gt 184 (353)
T 2i0e_A 170 ENIWDGV-TTKTFCGT 184 (353)
T ss_dssp CCCCTTC-CBCCCCSC
T ss_pred ccccCCc-ccccccCC
Confidence 7543322 22335565
No 122
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.92 E-value=2e-25 Score=242.24 Aligned_cols=159 Identities=31% Similarity=0.566 Sum_probs=132.6
Q ss_pred HHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 670 QIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 670 ~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
++....++|++.+.||+|+||.||+|+. +++.||||++.... ....+++.+|++++++++||||+++++++...+..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3334456788999999999999999987 58899999987653 23346789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+++ ++|+||||||+|||++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 999999999999999976432 235899999999999999999999985 34999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+....
T Consensus 187 ~~~~~ 191 (309)
T 3p86_A 187 RLKAS 191 (309)
T ss_dssp -----
T ss_pred ccccc
Confidence 86643
No 123
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.92 E-value=7.3e-25 Score=236.26 Aligned_cols=151 Identities=28% Similarity=0.450 Sum_probs=128.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--------------------------cchHHHHHHHHHHh
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------------------------QGNREFVNEIGMIS 727 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 727 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357889999999999999999975 589999999865421 11356889999999
Q ss_pred cCCCCceeeEEEEEEe--CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCC
Q 003134 728 AQQHPNLVKLYGCCVE--GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRD 805 (845)
Q Consensus 728 ~l~H~nIv~l~~~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrD 805 (845)
+++||||+++++++.. .+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||+++ |+|||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~D 162 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRD 162 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccC
Confidence 9999999999999987 5789999999999999876532 36899999999999999999999997 99999
Q ss_pred CCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 806 IKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 806 LKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
|||+|||++.++.+||+|||+++.+....
T Consensus 163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 191 (298)
T 2zv2_A 163 IKPSNLLVGEDGHIKIADFGVSNEFKGSD 191 (298)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECSSSS
T ss_pred CCHHHEEECCCCCEEEecCCCcccccccc
Confidence 99999999999999999999999876543
No 124
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.92 E-value=8.3e-25 Score=237.59 Aligned_cols=151 Identities=30% Similarity=0.499 Sum_probs=132.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||+||+|+..+++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 467889999999999999999998899999999975432 224678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++ +|.+.+.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+..
T Consensus 100 ~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 100 FMEK-DLKKVLDENK----TGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp CCSE-EHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred CCCC-CHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 9985 7888875532 35899999999999999999999997 99999999999999999999999999998754
Q ss_pred C
Q 003134 833 D 833 (845)
Q Consensus 833 ~ 833 (845)
.
T Consensus 172 ~ 172 (311)
T 3niz_A 172 P 172 (311)
T ss_dssp C
T ss_pred C
Confidence 3
No 125
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.91 E-value=8.3e-25 Score=241.59 Aligned_cols=149 Identities=26% Similarity=0.379 Sum_probs=135.1
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888999999999999999986 58999999996542 234578889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 121 e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp ECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred cCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999542 36899999999999999999999997 9999999999999999999999999999875
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 193 ~ 193 (350)
T 1rdq_E 193 G 193 (350)
T ss_dssp S
T ss_pred C
Confidence 4
No 126
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.91 E-value=5.8e-25 Score=240.58 Aligned_cols=150 Identities=25% Similarity=0.377 Sum_probs=125.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEE----CCCcEEEEEEcCccc----ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 746 (845)
.++|+..+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788999999999999999997 468999999997642 2234567889999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999998542 36889999999999999999999997 99999999999999999999999999
Q ss_pred ceecCC
Q 003134 827 AKLYEE 832 (845)
Q Consensus 827 a~~~~~ 832 (845)
++....
T Consensus 168 ~~~~~~ 173 (327)
T 3a62_A 168 CKESIH 173 (327)
T ss_dssp C-----
T ss_pred cccccc
Confidence 987543
No 127
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.91 E-value=3.8e-25 Score=236.37 Aligned_cols=150 Identities=26% Similarity=0.513 Sum_probs=133.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
.++|+..+.||+|+||.||+|.+.++..||+|+++... ...+++.+|++++.+++||||+++++++...+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 45688889999999999999999888899999997653 34578999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 102 ANGCLLNYLREMR----HRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp TTCBHHHHHHCGG----GCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred CCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999996532 36899999999999999999999997 99999999999999999999999999987643
No 128
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.91 E-value=7.8e-25 Score=242.06 Aligned_cols=155 Identities=25% Similarity=0.398 Sum_probs=134.4
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-----ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-----RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46888999999999999999975 58999999986432 1245789999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc---EEEEeecc
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFGL 826 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~---~kl~DFGl 826 (845)
||||+++|+|.+.+.... .....+++..+..++.||+.||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 104 v~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEECCSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEeCCCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999988875432 12235899999999999999999999997 999999999999986654 99999999
Q ss_pred ceecCCCC
Q 003134 827 AKLYEEDK 834 (845)
Q Consensus 827 a~~~~~~~ 834 (845)
++......
T Consensus 180 a~~~~~~~ 187 (351)
T 3c0i_A 180 AIQLGESG 187 (351)
T ss_dssp CEECCTTS
T ss_pred eeEecCCC
Confidence 99886543
No 129
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.91 E-value=6e-25 Score=239.92 Aligned_cols=152 Identities=33% Similarity=0.509 Sum_probs=131.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC----EEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN----QLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lV 750 (845)
.++|+..+.||+|+||.||+|++. ++.||||++.... .....+..|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 457889999999999999999985 7899999997543 23445667999999999999999999998743 47999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-------CCCCeEeCCCCCCCEEecCCCcEEEEe
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-------SRIKIVHRDIKTSNVLLDKDLNAKISD 823 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-------~~~~ivHrDLKp~NILld~~~~~kl~D 823 (845)
|||+++|+|.+++... .+++.++..++.|++.||+|||+. +.++|+||||||+|||++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999543 589999999999999999999987 011399999999999999999999999
Q ss_pred eccceecCCCC
Q 003134 824 FGLAKLYEEDK 834 (845)
Q Consensus 824 FGla~~~~~~~ 834 (845)
||+|+.+....
T Consensus 175 Fg~a~~~~~~~ 185 (322)
T 3soc_A 175 FGLALKFEAGK 185 (322)
T ss_dssp CTTCEEECTTS
T ss_pred CCccccccccc
Confidence 99998876543
No 130
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.91 E-value=7.1e-25 Score=244.13 Aligned_cols=155 Identities=26% Similarity=0.478 Sum_probs=134.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC--------CCcEEEEEEcCccc-ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 744 (845)
.++|...+.||+|+||.||+|++. ++..||||+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357888899999999999999862 35679999997653 23356799999999999 899999999999999
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl 813 (845)
+..|+||||+++|+|.+++...... ....+++.+++.++.||+.||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 9999999999999999999754311 1235899999999999999999999997 9999999999999
Q ss_pred cCCCcEEEEeeccceecCC
Q 003134 814 DKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 814 d~~~~~kl~DFGla~~~~~ 832 (845)
+.++.+||+|||+|+.+..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~ 255 (370)
T 2psq_A 237 TENNVMKIADFGLARDINN 255 (370)
T ss_dssp CTTCCEEECCCSSCEETTC
T ss_pred CCCCCEEEccccCCcccCc
Confidence 9999999999999997754
No 131
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=8.1e-24 Score=224.96 Aligned_cols=157 Identities=22% Similarity=0.280 Sum_probs=94.9
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
..++.|+|++|.+++..+..|.++++|++|+|++|+|+.+.+..|..+ +|++|+|++|++++..+..|.++++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 468899999999998777789999999999999998886655555554 5555555555555554455555555555555
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCC
Confidence 555555444444555555555555555555433334444555555555555554443334444444444444444443
No 132
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.91 E-value=1.8e-24 Score=241.94 Aligned_cols=153 Identities=27% Similarity=0.441 Sum_probs=136.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|... +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357889999999999999999986 5889999999766555566889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC--CCcEEEEeeccceecC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLYE 831 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~--~~~~kl~DFGla~~~~ 831 (845)
+++|+|.+++.... ..+++.++..++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+|+.+.
T Consensus 130 ~~gg~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 130 LSGGELFDRIAAED----YKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCBHHHHTTCTT----CCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999986432 35899999999999999999999997 999999999999974 5789999999999886
Q ss_pred CCC
Q 003134 832 EDK 834 (845)
Q Consensus 832 ~~~ 834 (845)
...
T Consensus 203 ~~~ 205 (387)
T 1kob_A 203 PDE 205 (387)
T ss_dssp TTS
T ss_pred CCc
Confidence 543
No 133
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=236.12 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=134.5
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc------cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
++|...+.||+|+||.||+|... +++.||+|.++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46888999999999999999986 589999999865432 23578999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC----cEEEEee
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISDF 824 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~----~~kl~DF 824 (845)
+||||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 91 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999543 36899999999999999999999987 99999999999999887 7999999
Q ss_pred ccceecCCC
Q 003134 825 GLAKLYEED 833 (845)
Q Consensus 825 Gla~~~~~~ 833 (845)
|+|+.+...
T Consensus 163 g~a~~~~~~ 171 (326)
T 2y0a_A 163 GLAHKIDFG 171 (326)
T ss_dssp TTCEECCTT
T ss_pred CCCeECCCC
Confidence 999987543
No 134
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.91 E-value=1.9e-24 Score=232.26 Aligned_cols=150 Identities=25% Similarity=0.462 Sum_probs=131.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|+..+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999986 589999999975432 234678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++ ++.+.+... ...+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9986 555555332 236899999999999999999999997 99999999999999999999999999998754
Q ss_pred C
Q 003134 833 D 833 (845)
Q Consensus 833 ~ 833 (845)
.
T Consensus 154 ~ 154 (292)
T 3o0g_A 154 P 154 (292)
T ss_dssp C
T ss_pred c
Confidence 3
No 135
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.91 E-value=1.6e-24 Score=252.10 Aligned_cols=163 Identities=30% Similarity=0.386 Sum_probs=141.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++|++++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888999999999999999986 59999999996542 33456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.+
T Consensus 263 mEy~~gg~L~~~l~~~~---~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG---QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSSS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceec
Confidence 99999999999996543 235899999999999999999999997 999999999999999999999999999988
Q ss_pred CCCCceeeeeeccCC
Q 003134 831 EEDKTHISTRIAGTM 845 (845)
Q Consensus 831 ~~~~~~~~t~~~GT~ 845 (845)
..... .+..+||+
T Consensus 337 ~~~~~--~~~~~GT~ 349 (576)
T 2acx_A 337 PEGQT--IKGRVGTV 349 (576)
T ss_dssp CTTCC--EECCCSCG
T ss_pred ccCcc--ccccCCCc
Confidence 65432 22345663
No 136
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.91 E-value=1e-24 Score=233.95 Aligned_cols=149 Identities=30% Similarity=0.519 Sum_probs=133.5
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
++|+..+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 4688899999999999999999889999999986543 23357889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+++ +|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 82 ~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE----GGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (288)
T ss_dssp CSE-EHHHHHHTST----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred cCC-CHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence 986 8998886532 36899999999999999999999997 99999999999999999999999999987653
No 137
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.5e-24 Score=224.53 Aligned_cols=202 Identities=17% Similarity=0.176 Sum_probs=122.8
Q ss_pred cCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCC-CCCCcccccccccccceeEeec-ccCCCCCCccc
Q 003134 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-LSGPFPKVLTNITTLKNLSIEG-NLFTGSIPPDI 183 (845)
Q Consensus 107 ~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~ 183 (845)
.+|. +. ++|++|+|++|+|+++.+..|..+ +|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 43 377777777777776666666555 56666666665 5555555666666666666665 66665544556
Q ss_pred ccCCCccEEEeecCcCcccCChhhhCCCCCC---cEEeecC-cCcccCchhhcCCcccc-eEEecCCcCCCCcchhhhcC
Q 003134 184 RKLINLQKLILSSNSFTGELPAELTKLTNLN---DLRISDN-NFSGKIPEFIGKWKKIQ-KLHIQGSSLEGPIPASISAL 258 (845)
Q Consensus 184 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l 258 (845)
.++++|++|+|++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|+|++|+++ .+|.
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~----- 173 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQG----- 173 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECT-----
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCH-----
Confidence 666666666666666664 444 55555555 6666666 56555455555555555 5555555555 2222
Q ss_pred CCCCEEEcCCCCCCCCCCcccccCCccEEEccCCc-CcccCcccccCC-CCcCEEeCCCCCCCCCCchhhhcCCCcCEEE
Q 003134 259 TSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL-IHGEIPDYIGDM-TKLKNIDLSFNNLTGGIPTTFEKLAKTNFMY 336 (845)
Q Consensus 259 ~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 336 (845)
..+...+|+.|+|++|+ +++..+..|.++ ++|+.|+|++|+|++..+. .+++|+.|+
T Consensus 174 ------------------~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~ 232 (239)
T 2xwt_C 174 ------------------YAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELI 232 (239)
T ss_dssp ------------------TTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEE
T ss_pred ------------------hhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceee
Confidence 22222345666777774 776666677777 7777788877777743333 566777777
Q ss_pred ccCC
Q 003134 337 LTGN 340 (845)
Q Consensus 337 L~~N 340 (845)
++++
T Consensus 233 l~~~ 236 (239)
T 2xwt_C 233 ARNT 236 (239)
T ss_dssp CTTC
T ss_pred ccCc
Confidence 7665
No 138
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.91 E-value=4.4e-25 Score=237.52 Aligned_cols=152 Identities=31% Similarity=0.540 Sum_probs=132.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-----CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeC--CEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 747 (845)
.++|+..+.||+|+||.||+|++ .+++.||||++........+++.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35788899999999999999985 25889999999876666667899999999999999999999998653 568
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred EEEEEeCCCCCHHHHHHhcc----cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccc
Confidence 99999999999999996542 25899999999999999999999987 999999999999999999999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.+...
T Consensus 162 ~~~~~~ 167 (295)
T 3ugc_A 162 KVLPQD 167 (295)
T ss_dssp C-----
T ss_pred ccccCC
Confidence 987543
No 139
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=5.8e-26 Score=252.22 Aligned_cols=259 Identities=18% Similarity=0.238 Sum_probs=188.8
Q ss_pred EEecCCCccccCCccccCCCCCCEEeccCCcccCCCc----cccccc--ceeEEEecCCCCCCCcccccccc-----ccc
Q 003134 97 IALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS----PQWASL--QLVELSVMGNRLSGPFPKVLTNI-----TTL 165 (845)
Q Consensus 97 L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~----~~~~~l--~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 165 (845)
.++++++++|.+|..+...++|++|+|++|.|++..+ ..+..+ +|++|+|++|+|++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5788899999888888888889999999999998877 566555 69999999999998888888776 889
Q ss_pred ceeEeecccCCCCCCccccc----C-CCccEEEeecCcCcccCChhhh----C-CCCCCcEEeecCcCcccC----chhh
Q 003134 166 KNLSIEGNLFTGSIPPDIRK----L-INLQKLILSSNSFTGELPAELT----K-LTNLNDLRISDNNFSGKI----PEFI 231 (845)
Q Consensus 166 ~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~N~l~g~~p~~~~----~-l~~L~~L~Ls~N~l~~~~----p~~~ 231 (845)
++|+|++|++++..+..+.. + ++|++|+|++|+|++..+..+. . .++|++|+|++|+|+... +..+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 99999999998777665544 3 8899999999999876665543 3 368999999999988543 3445
Q ss_pred cCCc-ccceEEecCCcCCCCcchhhhc----C-CCCCEEEcCCCCCCCCCCcc----ccc--CCccEEEccCCcCcccCc
Q 003134 232 GKWK-KIQKLHIQGSSLEGPIPASISA----L-TSLTDLRISDLKGSESAFPK----LDK--MNLKTLILTKCLIHGEIP 299 (845)
Q Consensus 232 ~~l~-~L~~L~Ls~N~l~g~~p~~~~~----l-~~L~~L~Ls~n~~~~~~~~~----l~~--~~L~~L~Ls~N~l~~~~p 299 (845)
..++ +|++|+|++|++++..+..+.. + ++|+.|+|++|.++...... +.. .+|+.|+|++|.|++..+
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp HTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 5565 8999999999998777755543 4 58888888888877643221 211 267777777777776554
Q ss_pred ----ccccCCCCcCEEeCCCCCCCCCCch-------hhhcCCCcCEEEccCCcccCCCChhhhcCCc
Q 003134 300 ----DYIGDMTKLKNIDLSFNNLTGGIPT-------TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNK 355 (845)
Q Consensus 300 ----~~~~~l~~L~~L~Ls~N~l~g~~p~-------~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~ 355 (845)
..+..+++|+.|+|++|++.+..+. .+..+++|++||+++|++.+..+..+.+.++
T Consensus 243 ~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~~~~l~ 309 (362)
T 3goz_A 243 ENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIR 309 (362)
T ss_dssp HHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHHHHHHH
T ss_pred HHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHHHHHHH
Confidence 2345667777777777775544433 4556677777777777777665555544333
No 140
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.91 E-value=9.8e-25 Score=242.95 Aligned_cols=161 Identities=28% Similarity=0.401 Sum_probs=129.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc---cchHHHHHHHHH-HhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++++... ...+.+..|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999986 488999999976532 233456677776 5778999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+..
T Consensus 118 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999998542 36889999999999999999999997 999999999999999999999999999875
Q ss_pred CCCCceeeeeeccCC
Q 003134 831 EEDKTHISTRIAGTM 845 (845)
Q Consensus 831 ~~~~~~~~t~~~GT~ 845 (845)
..... .....+||+
T Consensus 190 ~~~~~-~~~~~~gt~ 203 (373)
T 2r5t_A 190 IEHNS-TTSTFCGTP 203 (373)
T ss_dssp BCCCC-CCCSBSCCC
T ss_pred ccCCC-ccccccCCc
Confidence 43322 223455663
No 141
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.91 E-value=2.7e-24 Score=234.26 Aligned_cols=154 Identities=24% Similarity=0.366 Sum_probs=135.2
Q ss_pred cCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC--EEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~ 751 (845)
++|...+.||+|+||.||+|+... ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 568889999999999999999864 8999999997653 344677889999999999999999999998765 789999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe----cCCCcEEEEeeccc
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKISDFGLA 827 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl----d~~~~~kl~DFGla 827 (845)
||+++|+|.+++..... ...+++.+++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+|
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp ECCTTCBHHHHHHSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred eCCCCCCHHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999976432 234899999999999999999999997 9999999999999 78888999999999
Q ss_pred eecCCCC
Q 003134 828 KLYEEDK 834 (845)
Q Consensus 828 ~~~~~~~ 834 (845)
+.+....
T Consensus 164 ~~~~~~~ 170 (319)
T 4euu_A 164 RELEDDE 170 (319)
T ss_dssp EECCTTC
T ss_pred eecCCCC
Confidence 9876543
No 142
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.91 E-value=7e-25 Score=244.85 Aligned_cols=151 Identities=26% Similarity=0.482 Sum_probs=134.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|...+.||+|+||.||+|++. +++.||||.++.... ...++|.+|+++|++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457788899999999999999986 689999999975432 234578899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++|+|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 193 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999643 235899999999999999999999997 99999999999999999999999999987643
No 143
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.91 E-value=2e-24 Score=239.67 Aligned_cols=152 Identities=26% Similarity=0.417 Sum_probs=134.3
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567899999999999999999986 58999999996542 23346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC---CcEEEEeeccc
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAKISDFGLA 827 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~---~~~kl~DFGla 827 (845)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|
T Consensus 107 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp ECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 9999999999998543 36899999999999999999999997 9999999999999865 45999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 179 ~~~~~~ 184 (362)
T 2bdw_A 179 IEVNDS 184 (362)
T ss_dssp BCCTTC
T ss_pred eEecCC
Confidence 987643
No 144
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.6e-24 Score=237.72 Aligned_cols=149 Identities=29% Similarity=0.476 Sum_probs=133.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57888999999999999999974 68999999986542 233568899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+ +|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 89 E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp CCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred ECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 999 67898888543 36899999999999999999999997 9999999999999999999999999998775
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 160 ~~ 161 (336)
T 3h4j_B 160 DG 161 (336)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 145
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.91 E-value=3.7e-24 Score=227.95 Aligned_cols=151 Identities=25% Similarity=0.413 Sum_probs=137.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|.... +..||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4568889999999999999999864 779999999876666778999999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeeccceec
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKLY 830 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~~~ 830 (845)
+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++.+
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 88 CTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999988542 36899999999999999999999997 9999999999999 78899999999999987
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 160 ~~~ 162 (277)
T 3f3z_A 160 KPG 162 (277)
T ss_dssp CTT
T ss_pred cCc
Confidence 644
No 146
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.91 E-value=3.2e-24 Score=233.57 Aligned_cols=154 Identities=31% Similarity=0.550 Sum_probs=121.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457889999999999999999975 58999999997543 2345788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 753 YMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
|++ |+|.+++..... .....+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 599998854321 11235899999999999999999999987 9999999999999999999999999999875
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 160 ~ 160 (317)
T 2pmi_A 160 I 160 (317)
T ss_dssp S
T ss_pred C
Confidence 4
No 147
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.91 E-value=2.9e-24 Score=249.33 Aligned_cols=165 Identities=30% Similarity=0.405 Sum_probs=142.1
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999986 59999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||++||+|.+++..... ....+++..+..++.||+.||+|||+++ |+||||||+|||++.++++||+|||+|+.+.
T Consensus 265 E~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp CCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999865432 2346899999999999999999999997 9999999999999999999999999999876
Q ss_pred CCCceeeeeeccCC
Q 003134 832 EDKTHISTRIAGTM 845 (845)
Q Consensus 832 ~~~~~~~t~~~GT~ 845 (845)
..... ....+||+
T Consensus 341 ~~~~~-~~~~~GT~ 353 (543)
T 3c4z_A 341 AGQTK-TKGYAGTP 353 (543)
T ss_dssp TTCCC-BCCCCSCT
T ss_pred CCCcc-cccccCCc
Confidence 54332 23356764
No 148
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.91 E-value=8e-25 Score=250.02 Aligned_cols=161 Identities=28% Similarity=0.359 Sum_probs=128.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +++.||||+++.. .......+.+|++++++++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999975 5899999999754 223346778899999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHE-DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 298 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKE 298 (446)
T ss_dssp ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCcee
Confidence 9999999999998542 368999999999999999999998 76 99999999999999999999999999987
Q ss_pred cCCCCceeeeeeccC
Q 003134 830 YEEDKTHISTRIAGT 844 (845)
Q Consensus 830 ~~~~~~~~~t~~~GT 844 (845)
....... .+..+||
T Consensus 299 ~~~~~~~-~~~~~gt 312 (446)
T 4ejn_A 299 GIKDGAT-MKTFCGT 312 (446)
T ss_dssp TCC------CCSSSC
T ss_pred ccCCCcc-cccccCC
Confidence 5443322 2334555
No 149
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.91 E-value=2.4e-24 Score=240.07 Aligned_cols=146 Identities=29% Similarity=0.454 Sum_probs=126.7
Q ss_pred CCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccCCCCh
Q 003134 681 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL 759 (845)
.+.||+|+||.||+|+.. +++.||+|+++.......+++.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999975 5899999999876555667899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe--cCCCcEEEEeeccceecCCC
Q 003134 760 SRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL--DKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 760 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl--d~~~~~kl~DFGla~~~~~~ 833 (845)
.+++.... ..+++.++..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 174 ~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 174 FDRIIDES----YNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp HHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred HHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 99886432 36899999999999999999999997 9999999999999 56789999999999988654
No 150
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.91 E-value=9.6e-25 Score=252.53 Aligned_cols=152 Identities=26% Similarity=0.507 Sum_probs=136.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
..+|+..+.||+|+||.||+|++.. +..||||.++... ...++|.+|+++|++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567888999999999999999875 8899999997653 3467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
+++|+|.+++..... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....+
T Consensus 298 ~~~g~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 298 MTYGNLLDYLRECNR---QEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CTTCBHHHHHHHSCT---TTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred cCCCCHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999965322 36899999999999999999999997 999999999999999999999999999987543
No 151
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.91 E-value=7.6e-25 Score=250.75 Aligned_cols=153 Identities=27% Similarity=0.497 Sum_probs=136.1
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
....++|+..+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34456788899999999999999999888999999997653 45788999999999999999999999986 66789999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.++++... ...+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 262 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp CCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred eecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999999996532 236889999999999999999999997 9999999999999999999999999999764
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 336 ~ 336 (454)
T 1qcf_A 336 D 336 (454)
T ss_dssp C
T ss_pred C
Confidence 3
No 152
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=245.63 Aligned_cols=162 Identities=23% Similarity=0.356 Sum_probs=137.1
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
..++|+..+.||+|+||.||+|... +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567889999999999999999975 68999999986543 23356789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec---CCCcEEEEeeccc
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD---KDLNAKISDFGLA 827 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld---~~~~~kl~DFGla 827 (845)
|||+++|+|.+.+... ..+++.++..++.||+.||+|||+++ |+||||||+|||++ +++.+||+|||+|
T Consensus 89 ~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp ECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 9999999999998653 36899999999999999999999997 99999999999998 5678999999999
Q ss_pred eecCCCCceeeeeeccC
Q 003134 828 KLYEEDKTHISTRIAGT 844 (845)
Q Consensus 828 ~~~~~~~~~~~t~~~GT 844 (845)
+........ .....||
T Consensus 161 ~~~~~~~~~-~~~~~gt 176 (444)
T 3soa_A 161 IEVEGEQQA-WFGFAGT 176 (444)
T ss_dssp BCCCTTCCB-CCCSCSC
T ss_pred EEecCCCce-eecccCC
Confidence 887654332 2234455
No 153
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=9.1e-25 Score=241.88 Aligned_cols=161 Identities=26% Similarity=0.360 Sum_probs=138.6
Q ss_pred cCCCCCCcccccCcEEEEEEEE----CCCcEEEEEEcCccc----ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCE
Q 003134 676 NNFDPANKVGEGGFGSVYKGIL----SDGTVIAVKQLSSKS----RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 746 (845)
++|+..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++.++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688899999999999999997 368999999997642 23345677899999999 69999999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.++||||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred EEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999542 36899999999999999999999987 99999999999999999999999999
Q ss_pred ceecCCCCceeeeeeccC
Q 003134 827 AKLYEEDKTHISTRIAGT 844 (845)
Q Consensus 827 a~~~~~~~~~~~t~~~GT 844 (845)
|+.+............||
T Consensus 206 a~~~~~~~~~~~~~~~gt 223 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGT 223 (355)
T ss_dssp EEECCGGGGGGGCGGGSC
T ss_pred CeecccCCCCcccCcccC
Confidence 998754443333344555
No 154
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.91 E-value=4.1e-24 Score=230.24 Aligned_cols=148 Identities=29% Similarity=0.479 Sum_probs=127.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhc--CCCCceeeEEEEEEeC----CEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEG----NQLL 748 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~ 748 (845)
.++|+..+.||+|+||.||+|++ +++.||||++... ..+.+..|.+++.. ++||||+++++++... +..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46788999999999999999998 6899999998653 34556667776665 7999999999987643 4689
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeCCCCCCCEEecCCCcEE
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVLLDKDLNAK 820 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~ivHrDLKp~NILld~~~~~k 820 (845)
+||||+++|+|.++++.. .+++.++.+++.|++.||+||| +.+ |+||||||+|||++.++.+|
T Consensus 83 lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEECCCTTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEE
T ss_pred EehhhccCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEE
Confidence 999999999999999432 5899999999999999999999 654 99999999999999999999
Q ss_pred EEeeccceecCCCCc
Q 003134 821 ISDFGLAKLYEEDKT 835 (845)
Q Consensus 821 l~DFGla~~~~~~~~ 835 (845)
|+|||+|+.......
T Consensus 154 l~Dfg~a~~~~~~~~ 168 (301)
T 3q4u_A 154 IADLGLAVMHSQSTN 168 (301)
T ss_dssp ECCCTTCEEEETTTT
T ss_pred EeeCCCeeecccccc
Confidence 999999988765443
No 155
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.91 E-value=1.4e-25 Score=246.40 Aligned_cols=148 Identities=26% Similarity=0.349 Sum_probs=125.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--------ccchHHHHHHHHHHhcCC---------CCceeeE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--------RQGNREFVNEIGMISAQQ---------HPNLVKL 737 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l 737 (845)
.++|+..+.||+|+||.||+|+. +++.||||+++... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678899999999999999998 68999999997642 223478899999988885 8888888
Q ss_pred EEEEE------------------------------eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHH
Q 003134 738 YGCCV------------------------------EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIA 787 (845)
Q Consensus 738 ~~~~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia 787 (845)
.+.+. ..+..|+||||+++|++.+.+.. ..+++.+++.|+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 77653 26789999999999987766633 2579999999999999
Q ss_pred HHHHHHH-hCCCCCeEeCCCCCCCEEecCCC--------------------cEEEEeeccceecCC
Q 003134 788 RGLAYLH-EDSRIKIVHRDIKTSNVLLDKDL--------------------NAKISDFGLAKLYEE 832 (845)
Q Consensus 788 ~aL~yLH-~~~~~~ivHrDLKp~NILld~~~--------------------~~kl~DFGla~~~~~ 832 (845)
.||+||| +++ |+||||||+|||++.++ .+||+|||+|+....
T Consensus 172 ~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~ 234 (336)
T 2vuw_A 172 ASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD 234 (336)
T ss_dssp HHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred HHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence 9999999 886 99999999999999887 899999999998754
No 156
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.91 E-value=3.1e-24 Score=246.00 Aligned_cols=150 Identities=31% Similarity=0.512 Sum_probs=135.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999986 69999999997542 233567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 96 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 96 EYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp ECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 999999999999643 36899999999999999999999987 9999999999999999999999999999876
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 168 ~~ 169 (476)
T 2y94_A 168 DG 169 (476)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 157
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.91 E-value=3.1e-24 Score=228.82 Aligned_cols=151 Identities=31% Similarity=0.576 Sum_probs=134.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEecc
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
.++|+..+.||+|+||.||+|...++..||+|.++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 45788899999999999999999888899999997643 34678999999999999999999999986 45689999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
++++|.+++.... ...+++.++..++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++.....
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred CCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999995431 236899999999999999999999997 999999999999999999999999999987654
No 158
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=234.01 Aligned_cols=150 Identities=28% Similarity=0.343 Sum_probs=127.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--cchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..++||+|+||+||+|+.. +++.||||++..... ....++..|+..+.++ +||||+++++++.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56888999999999999999986 699999999865422 2234555666665555 9999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+ +++|.+++... ...+++.++..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+...
T Consensus 137 e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp ECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred ecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 999 67898888543 236999999999999999999999987 9999999999999999999999999998875
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 209 ~~ 210 (311)
T 3p1a_A 209 TA 210 (311)
T ss_dssp --
T ss_pred cC
Confidence 43
No 159
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.90 E-value=1.4e-24 Score=238.65 Aligned_cols=157 Identities=31% Similarity=0.521 Sum_probs=136.6
Q ss_pred HHhcCCCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 003134 673 AATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 673 ~~~~~y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 745 (845)
...++|+..+.||+|+||.||+|+.. +++.||+|+++.... ...+++.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578889999999999999999974 348999999976532 33567999999999999999999999999999
Q ss_pred EEEEEEeccCCCChhhhhhcCCcc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCC
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTE-------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDI 806 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDL 806 (845)
..++||||+++|+|.+++...... ....+++.+++.++.||++||+|||+++ |+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 999999999999999999753211 0146899999999999999999999997 999999
Q ss_pred CCCCEEecCCCcEEEEeeccceecCC
Q 003134 807 KTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 807 Kp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
||+|||++.++.+||+|||+++....
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~ 226 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYS 226 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred CcceEEECCCCeEEEeecCCCccccc
Confidence 99999999999999999999987643
No 160
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.90 E-value=2.9e-24 Score=238.35 Aligned_cols=148 Identities=25% Similarity=0.360 Sum_probs=130.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 457889999999999999999986 68999999997542 3346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc--EEEEeeccceecC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN--AKISDFGLAKLYE 831 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~--~kl~DFGla~~~~ 831 (845)
+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+|+...
T Consensus 98 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 98 ASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 9999999998542 36899999999999999999999987 999999999999987765 9999999998543
No 161
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.90 E-value=1.4e-24 Score=235.78 Aligned_cols=151 Identities=22% Similarity=0.356 Sum_probs=128.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCccccc---chHHHHHHHHHHhcCCCCceeeEEEEEEeCC----E
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQ---GNREFVNEIGMISAQQHPNLVKLYGCCVEGN----Q 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~ 746 (845)
.++|+..+.||+|+||.||+|+. .+++.||||+++..... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788999999999999999997 46899999999765322 2457889999999999999999999987653 4
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 59999999999999999542 36899999999999999999999997 99999999999999999999999999
Q ss_pred ceecCCC
Q 003134 827 AKLYEED 833 (845)
Q Consensus 827 a~~~~~~ 833 (845)
++.+...
T Consensus 163 a~~~~~~ 169 (311)
T 3ork_A 163 ARAIADS 169 (311)
T ss_dssp C------
T ss_pred ccccccc
Confidence 9887543
No 162
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.90 E-value=6.1e-25 Score=235.34 Aligned_cols=154 Identities=27% Similarity=0.513 Sum_probs=137.7
Q ss_pred HhcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
..++|+..+.||+|+||.||+|.+.. +..||+|.+... ....+++.+|++++++++||||+++++++...+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 45678889999999999999999864 889999999754 3345789999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++++|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 90 FMTYGNLLDYLRECN---RQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp CCTTEEHHHHHHHCC---TTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred cCCCCcHHHHHHhcc---cCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999996542 236899999999999999999999997 99999999999999999999999999998765
Q ss_pred CC
Q 003134 833 DK 834 (845)
Q Consensus 833 ~~ 834 (845)
..
T Consensus 164 ~~ 165 (288)
T 3kfa_A 164 DT 165 (288)
T ss_dssp SS
T ss_pred Cc
Confidence 44
No 163
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.90 E-value=4.5e-24 Score=230.20 Aligned_cols=152 Identities=32% Similarity=0.517 Sum_probs=131.7
Q ss_pred cCCCCCCcccccCcEEEEEEEE-----CCCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC--CEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQL 747 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 747 (845)
+.|+..+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++... +..
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577889999999999999984 358899999997553 33457899999999999999999999999876 668
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK----NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHhcc----ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccc
Confidence 99999999999999995432 36899999999999999999999997 999999999999999999999999999
Q ss_pred eecCCCC
Q 003134 828 KLYEEDK 834 (845)
Q Consensus 828 ~~~~~~~ 834 (845)
+.+....
T Consensus 174 ~~~~~~~ 180 (302)
T 4e5w_A 174 KAIETDK 180 (302)
T ss_dssp EECCTTC
T ss_pred ccccCCC
Confidence 9886544
No 164
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=8.5e-25 Score=239.78 Aligned_cols=252 Identities=18% Similarity=0.281 Sum_probs=186.6
Q ss_pred eEEEEEecCCCccccCCccccCC--CCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCC-cccccccccccceeE
Q 003134 93 HVVTIALKAQNLTGTLPTELSKL--RYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGP-FPKVLTNITTLKNLS 169 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L--~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 169 (845)
.++.++++++.+. +..+..+ ++|+.|++++|.+++..+..+...+|++|+|++|.+++. +|..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 3557888888776 4556666 888899999988888877655433788888888887765 677777888888888
Q ss_pred eecccCCCCCCcccccCCCccEEEeecC-cCccc-CChhhhCCCCCCcEEeecC-cCccc-CchhhcCCc-ccceEEecC
Q 003134 170 IEGNLFTGSIPPDIRKLINLQKLILSSN-SFTGE-LPAELTKLTNLNDLRISDN-NFSGK-IPEFIGKWK-KIQKLHIQG 244 (845)
Q Consensus 170 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~Ls~ 244 (845)
|++|++++..|..++.+++|++|+|++| .+++. ++..+.++++|++|+|++| ++++. ++..+..++ +|++|+|++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 8888887777777778888888888888 56653 5666777888888888888 77754 566777777 888888888
Q ss_pred C--cCC-CCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCc-CcccCcccccCCCCcCEEeCCCCCCCC
Q 003134 245 S--SLE-GPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCL-IHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (845)
Q Consensus 245 N--~l~-g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g 320 (845)
| .++ +.+|..+.++++|+.| +|++|. +++..+..+..+++|++|+|++|. +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L-----------------------~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~ 259 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHL-----------------------DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--D 259 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEE-----------------------ECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--T
T ss_pred CcccCCHHHHHHHHhhCCCCCEE-----------------------eCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--C
Confidence 7 454 4556666666666555 555565 566667778888999999999996 3
Q ss_pred CCch---hhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCC
Q 003134 321 GIPT---TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIE 373 (845)
Q Consensus 321 ~~p~---~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~ 373 (845)
..+. .+.++++|+.|+|++| ++...-..+...+..|++++|++++..|..+.
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHHhhCcceEEecccCccccCCccc
Confidence 3344 6888999999999998 44322233345688999999999998886553
No 165
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.90 E-value=9.4e-25 Score=241.72 Aligned_cols=165 Identities=26% Similarity=0.445 Sum_probs=139.9
Q ss_pred ccHHHHHHHhcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCccc-ccchHHHHHHHHHHhcC-CCCceeeE
Q 003134 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKL 737 (845)
Q Consensus 666 ~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l 737 (845)
+...+.....++|...+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 45556666778999999999999999999984 236899999997643 23346799999999999 88999999
Q ss_pred EEEEEeCC-EEEEEEeccCCCChhhhhhcCCccc----------------------------------------------
Q 003134 738 YGCCVEGN-QLLLVYEYMKNNCLSRAIFGKDTEY---------------------------------------------- 770 (845)
Q Consensus 738 ~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~---------------------------------------------- 770 (845)
++++...+ ..++||||+++|+|.++++......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998765 4899999999999999997653210
Q ss_pred ---------------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 771 ---------------RLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 771 ---------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
...+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 122899999999999999999999997 999999999999999999999999999977543
No 166
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.90 E-value=1.5e-24 Score=229.39 Aligned_cols=148 Identities=29% Similarity=0.580 Sum_probs=134.8
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccC
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~ 755 (845)
++|+..+.||+|+||.||+|...+++.||+|++.... ...+++.+|++++++++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 5678889999999999999999888999999997653 345789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 756 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 756 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
+++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 155 (267)
T 3t9t_A 87 HGCLSDYLRTQR----GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVL 155 (267)
T ss_dssp TCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBC
T ss_pred CCcHHHHHhhCc----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccc
Confidence 999999996532 35899999999999999999999997 9999999999999999999999999998764
No 167
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.90 E-value=1.5e-24 Score=248.04 Aligned_cols=151 Identities=31% Similarity=0.554 Sum_probs=132.0
Q ss_pred HhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
..++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 346688889999999999999999888889999998653 346789999999999999999999999865 678999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+++|+|.+++... ....+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 260 ~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 260 MSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 9999999999542 1235899999999999999999999987 99999999999999999999999999998754
No 168
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.90 E-value=7.2e-24 Score=225.86 Aligned_cols=150 Identities=29% Similarity=0.503 Sum_probs=134.5
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 56888999999999999999974 68999999996542 223478899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++++|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV----KPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp ECCTTEEHHHHHHTCS----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecCCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999996532 36899999999999999999999997 9999999999999999999999999999875
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 164 ~ 164 (278)
T 3cok_A 164 M 164 (278)
T ss_dssp -
T ss_pred C
Confidence 3
No 169
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.90 E-value=6.2e-24 Score=238.12 Aligned_cols=151 Identities=19% Similarity=0.264 Sum_probs=135.1
Q ss_pred hcCCCCCCccccc--CcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 675 TNNFDPANKVGEG--GFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
.++|+..+.||+| +||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4578899999999 99999999986 59999999997653 2334678889999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++..... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM---DGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999965422 35899999999999999999999997 99999999999999999999999999876
Q ss_pred cC
Q 003134 830 YE 831 (845)
Q Consensus 830 ~~ 831 (845)
..
T Consensus 178 ~~ 179 (389)
T 3gni_B 178 MI 179 (389)
T ss_dssp CE
T ss_pred ec
Confidence 53
No 170
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.90 E-value=7.9e-24 Score=229.38 Aligned_cols=150 Identities=27% Similarity=0.452 Sum_probs=133.5
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999986 489999999865432 224678899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++++|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+|+....
T Consensus 83 ~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp CCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred eCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999887543 35899999999999999999999997 99999999999999999999999999998764
Q ss_pred C
Q 003134 833 D 833 (845)
Q Consensus 833 ~ 833 (845)
.
T Consensus 155 ~ 155 (311)
T 4agu_A 155 P 155 (311)
T ss_dssp -
T ss_pred c
Confidence 3
No 171
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=5e-26 Score=260.75 Aligned_cols=274 Identities=18% Similarity=0.215 Sum_probs=139.0
Q ss_pred eEEEEEecCCCccc----cCCccccCCCCCCEEeccCCcccCCCcccccc-c-----ceeEEEecCCCCCC----Ccccc
Q 003134 93 HVVTIALKAQNLTG----TLPTELSKLRYLKQLDLSRNCLTGSFSPQWAS-L-----QLVELSVMGNRLSG----PFPKV 158 (845)
Q Consensus 93 ~v~~L~l~~~~l~g----~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~-l-----~L~~L~Ls~N~l~~----~~p~~ 158 (845)
+++.|+|++|.++. .++..+..+++|++|+|++|.++...+..+.. + +|++|+|++|+|+. .++..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 34555566555553 23444555566666666666555433322221 1 25666666666553 33555
Q ss_pred cccccccceeEeecccCCCCCCccccc-----CCCccEEEeecCcCcccC----ChhhhCCCCCCcEEeecCcCcccCch
Q 003134 159 LTNITTLKNLSIEGNLFTGSIPPDIRK-----LINLQKLILSSNSFTGEL----PAELTKLTNLNDLRISDNNFSGKIPE 229 (845)
Q Consensus 159 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~g~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~ 229 (845)
+..+++|++|+|++|.+++..+..+.. +++|++|+|++|++++.. +..+..+++|++|+|++|.++...+.
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 555666666666666655333332221 345666666666655422 34444555666666666665544333
Q ss_pred hhcC-----CcccceEEecCCcCCCC----cchhhhcCCCCCEEEcCCCCCCCCCCccc------ccCCccEEEccCCcC
Q 003134 230 FIGK-----WKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFPKL------DKMNLKTLILTKCLI 294 (845)
Q Consensus 230 ~~~~-----l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l------~~~~L~~L~Ls~N~l 294 (845)
.+.. .++|++|+|++|.+++. ++..+..+++|+.|++++|.++......+ ...+|++|+|++|.+
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 3322 34566666666666543 35555555666666666665543221111 122566666666665
Q ss_pred ccc----CcccccCCCCcCEEeCCCCCCCCCCchhhhcC-----CCcCEEEccCCcccCCC----Chhh--hcCCceEEe
Q 003134 295 HGE----IPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL-----AKTNFMYLTGNKLTGPV----PKYI--FNSNKNVDI 359 (845)
Q Consensus 295 ~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~L~~N~l~g~i----p~~~--~~~l~~L~l 359 (845)
+.. ++..+..+++|++|+|++|++++..+..+... ++|+.|+|++|.+++.. |..+ ...|+.|++
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 543 34445555666666666665554333333322 45666666666555432 2222 135556666
Q ss_pred ecCCCcC
Q 003134 360 SLNNFTW 366 (845)
Q Consensus 360 s~N~l~~ 366 (845)
++|.+++
T Consensus 349 s~n~i~~ 355 (461)
T 1z7x_W 349 SNNRLED 355 (461)
T ss_dssp CSSBCHH
T ss_pred cCCcccc
Confidence 6665543
No 172
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.90 E-value=3.6e-24 Score=234.48 Aligned_cols=150 Identities=24% Similarity=0.301 Sum_probs=132.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 35788899999999999999997 468999999986543 234688999999999 99999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc-----EEEEeeccc
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKISDFGLA 827 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~-----~kl~DFGla 827 (845)
|+ +++|.+++... ...+++.+++.++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+|
T Consensus 86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 86 LL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred eC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 99 99999999653 236899999999999999999999997 999999999999998887 999999999
Q ss_pred eecCCCC
Q 003134 828 KLYEEDK 834 (845)
Q Consensus 828 ~~~~~~~ 834 (845)
+.+....
T Consensus 158 ~~~~~~~ 164 (330)
T 2izr_A 158 KEYIDPE 164 (330)
T ss_dssp EESBCTT
T ss_pred eeeecCC
Confidence 9875433
No 173
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.90 E-value=2.4e-24 Score=230.11 Aligned_cols=151 Identities=27% Similarity=0.443 Sum_probs=123.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC----CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
.++|+..+.||+|+||.||+|.+.. +..||+|.++... ....+.+.+|+.++++++||||+++++++ .++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 4578889999999999999999743 5679999987643 33356789999999999999999999997 4567899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK----YSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEECCTTEEHHHHHHHTT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEecCCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccc
Confidence 999999999999996432 35899999999999999999999987 99999999999999999999999999998
Q ss_pred cCCC
Q 003134 830 YEED 833 (845)
Q Consensus 830 ~~~~ 833 (845)
....
T Consensus 166 ~~~~ 169 (281)
T 1mp8_A 166 MEDS 169 (281)
T ss_dssp ----
T ss_pred cCcc
Confidence 7543
No 174
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.90 E-value=4.1e-24 Score=236.06 Aligned_cols=148 Identities=30% Similarity=0.429 Sum_probs=121.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467888999999999999999986 48899999997542 346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEEeeccceec
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFGLAKLY 830 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~DFGla~~~ 830 (845)
+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 130 ~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 130 VTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999998643 25899999999999999999999997 999999999999975 889999999999977
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 202 ~~ 203 (349)
T 2w4o_A 202 EH 203 (349)
T ss_dssp --
T ss_pred Cc
Confidence 54
No 175
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.90 E-value=3.4e-24 Score=229.59 Aligned_cols=150 Identities=25% Similarity=0.444 Sum_probs=134.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC-C-------cEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD-G-------TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 746 (845)
.++|...+.||+|+||.||+|+... + ..||+|++........+++.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3568888999999999999998653 3 5799999987766677889999999999999999999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc--------
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-------- 818 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~-------- 818 (845)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK----NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccce
Confidence 999999999999999996542 24899999999999999999999997 999999999999998887
Q ss_pred EEEEeeccceecC
Q 003134 819 AKISDFGLAKLYE 831 (845)
Q Consensus 819 ~kl~DFGla~~~~ 831 (845)
+||+|||+++...
T Consensus 160 ~kl~Dfg~~~~~~ 172 (289)
T 4fvq_A 160 IKLSDPGISITVL 172 (289)
T ss_dssp EEECCCCSCTTTS
T ss_pred eeeccCccccccc
Confidence 9999999997654
No 176
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.90 E-value=4e-24 Score=231.87 Aligned_cols=157 Identities=31% Similarity=0.508 Sum_probs=135.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
.++|...+.||+|+||.||+|.. .+++.||+|+++... ....+++.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788899999999999999986 235889999997643 33456789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcc-------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCC
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTE-------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKT 808 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp 808 (845)
++||||+++|+|.+++...... ....+++.++.+++.|+++||+|||+++ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 9999999999999999754320 1134899999999999999999999997 99999999
Q ss_pred CCEEecCCCcEEEEeeccceecCCCC
Q 003134 809 SNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 809 ~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
+||+++.++.+||+|||+++......
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~ 204 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEED 204 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTS
T ss_pred heEEEcCCCCEEEccccccccccccc
Confidence 99999999999999999999875443
No 177
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.90 E-value=3.5e-24 Score=245.60 Aligned_cols=148 Identities=23% Similarity=0.432 Sum_probs=121.9
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 747 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 747 (845)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+++.+|+++|++++||||+++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57889999999999999999976 58999999986542 23456789999999999999999999998543 578
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|
T Consensus 133 ~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEECCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccc
Confidence 99999985 6899988543 36899999999999999999999997 999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+....
T Consensus 204 ~~~~~ 208 (458)
T 3rp9_A 204 RTVDY 208 (458)
T ss_dssp BCTTS
T ss_pred hhccC
Confidence 98753
No 178
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=239.98 Aligned_cols=155 Identities=28% Similarity=0.458 Sum_probs=134.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC--------CCcEEEEEEcCccc-ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 744 (845)
.++|...+.||+|+||.||+|+.. .+..||||+++... ....+++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457888899999999999999862 24689999997653 23357789999999999 999999999999999
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl 813 (845)
+..++||||+++|+|.+++...... ....+++.+++.|+.|++.||+|||+++ |+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 9999999999999999999754311 1235899999999999999999999997 9999999999999
Q ss_pred cCCCcEEEEeeccceecCC
Q 003134 814 DKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 814 d~~~~~kl~DFGla~~~~~ 832 (845)
+.++.+||+|||+|+....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~ 243 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHH 243 (382)
T ss_dssp CTTCCEEECSCSCCCCSSC
T ss_pred cCCCcEEEcccCccccccc
Confidence 9999999999999997754
No 179
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.90 E-value=1.5e-24 Score=236.46 Aligned_cols=158 Identities=26% Similarity=0.476 Sum_probs=123.2
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEECC-C---cEEEEEEcCcc--cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILSD-G---TVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 745 (845)
....++|+..+.||+|+||.||+|++.. + ..||||+++.. .....+++.+|++++++++||||+++++++...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3445689999999999999999999754 3 27999999765 2344578999999999999999999999998776
Q ss_pred EE------EEEEeccCCCChhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc
Q 003134 746 QL------LLVYEYMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN 818 (845)
Q Consensus 746 ~~------~lV~Ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~ 818 (845)
.. ++||||+++|+|.+++..... .....+++.++.+++.|++.||+|||+++ |+||||||+|||++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCC
Confidence 55 999999999999999854321 11235899999999999999999999997 999999999999999999
Q ss_pred EEEEeeccceecCC
Q 003134 819 AKISDFGLAKLYEE 832 (845)
Q Consensus 819 ~kl~DFGla~~~~~ 832 (845)
+||+|||+|+....
T Consensus 176 ~kl~Dfg~a~~~~~ 189 (323)
T 3qup_A 176 VCVADFGLSRKIYS 189 (323)
T ss_dssp EEECCCCC------
T ss_pred EEEeeccccccccc
Confidence 99999999987754
No 180
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3.3e-23 Score=217.69 Aligned_cols=180 Identities=21% Similarity=0.279 Sum_probs=128.7
Q ss_pred ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEee
Q 003134 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (845)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 219 (845)
..++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3556777777776 3444443 467777777777776666667777777777777777776666667777777777777
Q ss_pred cCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCc
Q 003134 220 DNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP 299 (845)
Q Consensus 220 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p 299 (845)
+|+|++..+..|..+++|++|+|++|+|++..+..|.++++| +.|+|++|+|++..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-----------------------~~L~Ls~N~l~~~~~ 148 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKL-----------------------KELRLNTNQLQSIPA 148 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-----------------------CEEECCSSCCCCCCT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcc-----------------------cEEECcCCcCCccCH
Confidence 777776666666777777777777777776555555555544 445666667776667
Q ss_pred ccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC
Q 003134 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 300 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++++.
T Consensus 149 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 7788888888889988888887777888888888888888877765
No 181
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.90 E-value=5.2e-24 Score=228.16 Aligned_cols=154 Identities=25% Similarity=0.404 Sum_probs=133.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
++|...+.||+|+||.||+|+.. ++..||+|++.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999975 58899999987653 33467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeeccceec
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKLY 830 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~~~ 830 (845)
+++|+|.+.+.... .....+++..+..++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+|+.+
T Consensus 102 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 102 CEGGELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CSCCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred CCCCcHHHHHHhhh-hcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999885432 12246899999999999999999999997 9999999999999 45688999999999877
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 178 ~~~ 180 (285)
T 3is5_A 178 KSD 180 (285)
T ss_dssp ---
T ss_pred CCc
Confidence 543
No 182
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.90 E-value=5.5e-24 Score=225.76 Aligned_cols=151 Identities=32% Similarity=0.579 Sum_probs=124.6
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc----cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR----QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|++. ++.||||+++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999985 88999999876432 23567899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC--------CCcEEEEe
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK--------DLNAKISD 823 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~--------~~~~kl~D 823 (845)
||+++++|.+++.. ..+++.++..++.|++.||+|||+++..+|+||||||+||+++. ++.+||+|
T Consensus 86 e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 86 EFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp ECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999853 26899999999999999999999987556999999999999986 67899999
Q ss_pred eccceecCCC
Q 003134 824 FGLAKLYEED 833 (845)
Q Consensus 824 FGla~~~~~~ 833 (845)
||+++.+...
T Consensus 160 fg~~~~~~~~ 169 (271)
T 3dtc_A 160 FGLAREWHRT 169 (271)
T ss_dssp CCC-------
T ss_pred CCcccccccc
Confidence 9999877543
No 183
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.90 E-value=3.9e-24 Score=235.37 Aligned_cols=159 Identities=23% Similarity=0.373 Sum_probs=134.5
Q ss_pred HHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc-----cccchHHHHHHHHHHhcCCCCceeeEEEEEEeC
Q 003134 671 IKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK-----SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG 744 (845)
Q Consensus 671 l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 744 (845)
+....++|+..+.||+|+||.||+|+.. +++.||+|++... .....+++.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 4556678999999999999999999975 5889999998654 234457899999999999999999999999999
Q ss_pred CEEEEEEeccCCCChhhhhhcCCc-----------------------------------ccccCCCHHHHHHHHHHHHHH
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDT-----------------------------------EYRLKLDWPTRKKICIGIARG 789 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~-----------------------------------~~~~~l~~~~~~~i~~~ia~a 789 (845)
+..++||||+++|+|.+++..... .....+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852100 001234677888999999999
Q ss_pred HHHHHhCCCCCeEeCCCCCCCEEecCCC--cEEEEeeccceecCC
Q 003134 790 LAYLHEDSRIKIVHRDIKTSNVLLDKDL--NAKISDFGLAKLYEE 832 (845)
Q Consensus 790 L~yLH~~~~~~ivHrDLKp~NILld~~~--~~kl~DFGla~~~~~ 832 (845)
|+|||+++ |+||||||+|||++.++ .+||+|||+|+.+..
T Consensus 181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~ 222 (345)
T 3hko_A 181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK 222 (345)
T ss_dssp HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGG
T ss_pred HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccc
Confidence 99999997 99999999999998776 899999999997744
No 184
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.90 E-value=5.7e-24 Score=241.87 Aligned_cols=150 Identities=25% Similarity=0.443 Sum_probs=131.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 746 (845)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467889999999999999999975 58899999997542 23456889999999999999999999999866 57
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||++ |+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCC
Confidence 999999987 5999998643 36899999999999999999999997 99999999999999999999999999
Q ss_pred ceecCCC
Q 003134 827 AKLYEED 833 (845)
Q Consensus 827 a~~~~~~ 833 (845)
|+.....
T Consensus 176 a~~~~~~ 182 (432)
T 3n9x_A 176 ARTINSE 182 (432)
T ss_dssp CEEC---
T ss_pred ccccccc
Confidence 9987543
No 185
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.90 E-value=1.2e-23 Score=226.13 Aligned_cols=150 Identities=25% Similarity=0.389 Sum_probs=134.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888999999999999999986 48899999986542 23356788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++++|.+++... ..+++.++..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 165 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165 (294)
T ss_dssp EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceec
Confidence 9999999999988532 36899999999999999999999997 999999999999999999999999999987
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 166 ~~ 167 (294)
T 2rku_A 166 EY 167 (294)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 186
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=4.9e-24 Score=231.39 Aligned_cols=228 Identities=17% Similarity=0.204 Sum_probs=181.7
Q ss_pred cccccceeEEEecCCCCCCCccc---ccccccccceeEeecccCCCCCCccc--ccCCCccEEEeecCcCcccCC----h
Q 003134 135 QWASLQLVELSVMGNRLSGPFPK---VLTNITTLKNLSIEGNLFTGSIPPDI--RKLINLQKLILSSNSFTGELP----A 205 (845)
Q Consensus 135 ~~~~l~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~ 205 (845)
.+..++++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|++++..+ .
T Consensus 60 ~~~~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~ 139 (310)
T 4glp_A 60 TVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAEL 139 (310)
T ss_dssp GGSSCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHH
T ss_pred HhhhcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHH
Confidence 34445788999999887632211 12345779999999999999999988 899999999999999998666 4
Q ss_pred hhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC--cc--hhhhcCCCCCEEEcCCCCCCCCCCc---c
Q 003134 206 ELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP--IP--ASISALTSLTDLRISDLKGSESAFP---K 278 (845)
Q Consensus 206 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~--~p--~~~~~l~~L~~L~Ls~n~~~~~~~~---~ 278 (845)
.+..+++|++|+|++|++++..|..|..+++|++|+|++|++.+. ++ ..++.+++|+.|+|++|+++..+.. .
T Consensus 140 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l 219 (310)
T 4glp_A 140 QQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAAL 219 (310)
T ss_dssp HTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHH
T ss_pred HhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHH
Confidence 456899999999999999999899999999999999999998763 22 3347899999999999998754322 1
Q ss_pred ccc-CCccEEEccCCcCcccCcccccCC---CCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC-CChhhhcC
Q 003134 279 LDK-MNLKTLILTKCLIHGEIPDYIGDM---TKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP-VPKYIFNS 353 (845)
Q Consensus 279 l~~-~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~-ip~~~~~~ 353 (845)
+.. .+|++|+|++|+|++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. .+ .-...
T Consensus 220 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~-~~l~~ 295 (310)
T 4glp_A 220 AAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQP-DELPE 295 (310)
T ss_dssp HHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCT-TSCCC
T ss_pred HhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchh-hhCCC
Confidence 222 489999999999998888777776 68999999999998 6676664 7899999999999873 32 22467
Q ss_pred CceEEeecCCCcC
Q 003134 354 NKNVDISLNNFTW 366 (845)
Q Consensus 354 l~~L~ls~N~l~~ 366 (845)
|+.|+|++|+|+.
T Consensus 296 L~~L~L~~N~l~~ 308 (310)
T 4glp_A 296 VDNLTLDGNPFLV 308 (310)
T ss_dssp CSCEECSSTTTSC
T ss_pred ccEEECcCCCCCC
Confidence 8899999997763
No 187
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.90 E-value=1.4e-23 Score=227.97 Aligned_cols=148 Identities=24% Similarity=0.364 Sum_probs=130.4
Q ss_pred cCCCCC-CcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
+.|.+. +.||+|+||.||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457664 78999999999999965 6899999999776555678899999999884 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc---EEEEeecccee
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFGLAKL 829 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~---~kl~DFGla~~ 829 (845)
|+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++. +||+|||+++.
T Consensus 92 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred cCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999543 36899999999999999999999997 999999999999998776 99999999987
Q ss_pred cC
Q 003134 830 YE 831 (845)
Q Consensus 830 ~~ 831 (845)
..
T Consensus 164 ~~ 165 (316)
T 2ac3_A 164 IK 165 (316)
T ss_dssp --
T ss_pred cc
Confidence 64
No 188
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.90 E-value=1.1e-23 Score=224.07 Aligned_cols=149 Identities=30% Similarity=0.528 Sum_probs=119.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 58999999997642 233568899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+ +++|.+.+... ..+++.++.+++.|++.||+|||+++ |+||||||+||++++++.+||+|||+++...
T Consensus 93 e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp ECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred hhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceecc
Confidence 999 66788877543 25899999999999999999999997 9999999999999999999999999998775
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 164 ~~ 165 (275)
T 2eue_A 164 DG 165 (275)
T ss_dssp --
T ss_pred Cc
Confidence 43
No 189
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.90 E-value=8.2e-24 Score=241.87 Aligned_cols=148 Identities=32% Similarity=0.517 Sum_probs=132.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC-EEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN-QLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|.+. ++.||||+++... ..++|.+|+++|++++||||+++++++...+ ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 456788899999999999999985 7899999997653 4678999999999999999999999988765 79999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 269 ~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 269 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp CTTCBHHHHHHHHC---TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred cCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999996532 224789999999999999999999997 9999999999999999999999999999664
No 190
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.90 E-value=7.4e-24 Score=231.60 Aligned_cols=152 Identities=33% Similarity=0.520 Sum_probs=135.5
Q ss_pred cCCCCCCcccccCcEEEEEEEE-----CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEE--eCCEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV--EGNQLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~~ 748 (845)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. ..+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5788899999999999999984 358899999998766666678999999999999999999999987 456799
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++++|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 103 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHR----ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEECCTTCBHHHHHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEeecCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccce
Confidence 9999999999999996432 35899999999999999999999987 9999999999999999999999999999
Q ss_pred ecCCCC
Q 003134 829 LYEEDK 834 (845)
Q Consensus 829 ~~~~~~ 834 (845)
......
T Consensus 176 ~~~~~~ 181 (327)
T 3lxl_A 176 LLPLDK 181 (327)
T ss_dssp ECCTTC
T ss_pred ecccCC
Confidence 876544
No 191
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.90 E-value=1.1e-23 Score=231.12 Aligned_cols=150 Identities=27% Similarity=0.410 Sum_probs=134.2
Q ss_pred cCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+++..+ ++.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 567888999999999999999864 7899999986542 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 121 e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 121 ELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp CCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999988542 36899999999999999999999997 9999999999999999999999999999875
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 193 ~~ 194 (335)
T 2owb_A 193 YD 194 (335)
T ss_dssp ST
T ss_pred cC
Confidence 43
No 192
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.4e-23 Score=218.71 Aligned_cols=179 Identities=17% Similarity=0.177 Sum_probs=157.1
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCc-ccCCCccccccc-ceeEEEecC-CCCCCCccccccccccccee
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNC-LTGSFSPQWASL-QLVELSVMG-NRLSGPFPKVLTNITTLKNL 168 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~~l-~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 168 (845)
.+++.|++++|.+++..+..|.++++|++|+|++|+ ++.+.+..|..+ +|++|+|++ |+|++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999998888899999999999999997 999888899988 999999999 99998888899999999999
Q ss_pred EeecccCCCCCCcccccCCCcc---EEEeecC-cCcccCChhhhCCCCCC-cEEeecCcCcccCchhhcCCcccceEEec
Q 003134 169 SIEGNLFTGSIPPDIRKLINLQ---KLILSSN-SFTGELPAELTKLTNLN-DLRISDNNFSGKIPEFIGKWKKIQKLHIQ 243 (845)
Q Consensus 169 ~Ls~N~l~g~~p~~~~~l~~L~---~L~Ls~N-~l~g~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 243 (845)
+|++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ +|+|++|+++...+..|.. ++|++|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 999999996 676 88899998 9999999 99977777899999999 9999999999544445555 899999999
Q ss_pred CCc-CCCCcchhhhcC-CCCCEEEcCCCCCCC
Q 003134 244 GSS-LEGPIPASISAL-TSLTDLRISDLKGSE 273 (845)
Q Consensus 244 ~N~-l~g~~p~~~~~l-~~L~~L~Ls~n~~~~ 273 (845)
+|+ +++..+..|.++ ++|+.|++++|.++.
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~ 219 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA 219 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc
Confidence 995 997777888888 777777666555543
No 193
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.90 E-value=4.2e-24 Score=234.63 Aligned_cols=152 Identities=26% Similarity=0.394 Sum_probs=134.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--------cchHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 745 (845)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 467899999999999999999975 589999999876421 12346778999999999999999999999999
Q ss_pred EEEEEEeccCCC-ChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEee
Q 003134 746 QLLLVYEYMKNN-CLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDF 824 (845)
Q Consensus 746 ~~~lV~Ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DF 824 (845)
..++||||+.+| +|.+++... ..+++..+..|+.|++.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeec
Confidence 999999999777 999998653 25899999999999999999999997 999999999999999999999999
Q ss_pred ccceecCCCC
Q 003134 825 GLAKLYEEDK 834 (845)
Q Consensus 825 Gla~~~~~~~ 834 (845)
|+++......
T Consensus 175 g~a~~~~~~~ 184 (335)
T 3dls_A 175 GSAAYLERGK 184 (335)
T ss_dssp TTCEECCTTC
T ss_pred ccceECCCCC
Confidence 9999886543
No 194
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.90 E-value=2e-23 Score=228.22 Aligned_cols=142 Identities=28% Similarity=0.396 Sum_probs=125.8
Q ss_pred CCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCCEEEEEEeccCCCC
Q 003134 681 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~Ey~~~gs 758 (845)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|++++.++. ||||+++++++.+.+..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999986 5899999998643 3467789999999997 9999999999999999999999999999
Q ss_pred hhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC---cEEEEeeccceecCCC
Q 003134 759 LSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL---NAKISDFGLAKLYEED 833 (845)
Q Consensus 759 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~---~~kl~DFGla~~~~~~ 833 (845)
|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+|+.....
T Consensus 93 L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 93 LFERIKKK-----KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp HHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 99999653 36899999999999999999999997 99999999999998765 8999999999977543
No 195
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.90 E-value=8.3e-24 Score=237.78 Aligned_cols=153 Identities=24% Similarity=0.366 Sum_probs=134.3
Q ss_pred cCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC--EEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lV~ 751 (845)
++|...+.||+|+||.||+|++.. ++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 468889999999999999999864 8999999997653 344577889999999999999999999998765 789999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe----cCCCcEEEEeeccc
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKISDFGLA 827 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl----d~~~~~kl~DFGla 827 (845)
||+++|+|.+++..... ...+++.+++.++.|++.||+|||+++ |+||||||+|||+ +.++.+||+|||+|
T Consensus 89 e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp CCCTTEEHHHHTTSGGG--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred ecCCCCCHHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 99999999999965422 224899999999999999999999997 9999999999999 77888999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 164 ~~~~~~ 169 (396)
T 4eut_A 164 RELEDD 169 (396)
T ss_dssp EECCCG
T ss_pred eEccCC
Confidence 987543
No 196
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.90 E-value=1.2e-23 Score=224.77 Aligned_cols=155 Identities=28% Similarity=0.462 Sum_probs=134.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... .....++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999986 68999999987542 23456788999999999 999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC--------------
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-------------- 816 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~-------------- 816 (845)
|||+++|+|.+++.... .....+++.++..++.||+.||+|||+++ |+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 90 NEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EECCTTCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEecCCCcHHHHHHhhc-ccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999996532 11246899999999999999999999997 9999999999999844
Q ss_pred -----CcEEEEeeccceecCCC
Q 003134 817 -----LNAKISDFGLAKLYEED 833 (845)
Q Consensus 817 -----~~~kl~DFGla~~~~~~ 833 (845)
..+||+|||+++.....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~ 187 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP 187 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS
T ss_pred ccCCceEEEEcccccccccCCc
Confidence 47999999999987653
No 197
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.90 E-value=9.5e-24 Score=252.60 Aligned_cols=163 Identities=27% Similarity=0.353 Sum_probs=140.2
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc---cccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK---SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 748 (845)
..++|+..+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3567999999999999999999976 5889999999754 234456788999999987 7999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++|+|.+++... ..+++.+++.|+.||+.||+|||+++ ||||||||+|||++.++++||+|||+|+
T Consensus 419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999643 36899999999999999999999997 9999999999999999999999999999
Q ss_pred ecCCCCceeeeeeccCC
Q 003134 829 LYEEDKTHISTRIAGTM 845 (845)
Q Consensus 829 ~~~~~~~~~~t~~~GT~ 845 (845)
........ ....+||+
T Consensus 491 ~~~~~~~~-~~~~~GT~ 506 (674)
T 3pfq_A 491 ENIWDGVT-TKTFCGTP 506 (674)
T ss_dssp ECCCTTCC-BCCCCSCS
T ss_pred ccccCCcc-cccccCCC
Confidence 75443322 33456764
No 198
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.90 E-value=8.8e-24 Score=236.85 Aligned_cols=150 Identities=28% Similarity=0.536 Sum_probs=123.9
Q ss_pred HHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc--cccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCC--E
Q 003134 673 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGN--Q 746 (845)
Q Consensus 673 ~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~ 746 (845)
...++|+..+.||+|+||.||+|.+. +++.||||++... .....+++.+|+.++.++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999975 5899999998654 2334567889999999997 999999999998654 7
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 899999998 5899888542 6899999999999999999999997 99999999999999999999999999
Q ss_pred ceecCC
Q 003134 827 AKLYEE 832 (845)
Q Consensus 827 a~~~~~ 832 (845)
|+.+..
T Consensus 156 a~~~~~ 161 (388)
T 3oz6_A 156 SRSFVN 161 (388)
T ss_dssp CEESSS
T ss_pred cccccc
Confidence 997643
No 199
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.1e-23 Score=228.29 Aligned_cols=151 Identities=23% Similarity=0.308 Sum_probs=130.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccc---hHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQG---NREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|...+.||+|+||.||+|+.. +++.||+|++....... .+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999976 58899999997653322 46789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999999542 36899999999999999999999997 999999999999999999999999999877
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 185 ~~~ 187 (309)
T 2h34_A 185 TDE 187 (309)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 200
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.90 E-value=1.3e-23 Score=229.20 Aligned_cols=151 Identities=25% Similarity=0.360 Sum_probs=135.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc------chHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|.++..... ..+++.+|++++++++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999986 5899999998754321 357899999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC----cEEEEe
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISD 823 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~----~~kl~D 823 (845)
++||||+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++ .+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 9999999999999999643 35889999999999999999999997 99999999999999888 799999
Q ss_pred eccceecCCC
Q 003134 824 FGLAKLYEED 833 (845)
Q Consensus 824 FGla~~~~~~ 833 (845)
||+++.....
T Consensus 163 fg~~~~~~~~ 172 (321)
T 2a2a_A 163 FGLAHEIEDG 172 (321)
T ss_dssp CTTCEECCTT
T ss_pred CccceecCcc
Confidence 9999987653
No 201
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.90 E-value=9.9e-24 Score=228.66 Aligned_cols=147 Identities=29% Similarity=0.526 Sum_probs=127.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|...+.||+|+||.||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 357888999999999999999874 358888887542 233568899999999999999999999865 556899999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
|+++|+|.+++.... ..+++.++..|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE----TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp CCSSCBHHHHHHTSC----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred cCCCCcHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 999999999996442 36899999999999999999999997 9999999999999999999999999998764
No 202
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.90 E-value=7.6e-24 Score=234.69 Aligned_cols=162 Identities=26% Similarity=0.353 Sum_probs=140.5
Q ss_pred cCcccHHHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-----CCceee
Q 003134 663 TGLYTLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----HPNLVK 736 (845)
Q Consensus 663 ~~~~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~ 736 (845)
...+++++.....++|.+.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|++++.+++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 445666666677889999999999999999999985 5889999999753 233466788999999886 999999
Q ss_pred EEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC-
Q 003134 737 LYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK- 815 (845)
Q Consensus 737 l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~- 815 (845)
+++++...+..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||+++ |+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDP 173 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccc
Confidence 999999999999999999 8999999965432 25899999999999999999999987 999999999999975
Q ss_pred ------------------------CCcEEEEeeccceecCC
Q 003134 816 ------------------------DLNAKISDFGLAKLYEE 832 (845)
Q Consensus 816 ------------------------~~~~kl~DFGla~~~~~ 832 (845)
++.+||+|||+|+....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~ 214 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence 78999999999997654
No 203
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=3e-23 Score=222.96 Aligned_cols=199 Identities=22% Similarity=0.203 Sum_probs=174.1
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.+++++++++ .+|..+. ++|++|+|++|+|++..+..|..+ +|++|+|++|+|++..+. +.+++|++|+|
T Consensus 10 ~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~L 84 (290)
T 1p9a_G 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDL 84 (290)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEEC
T ss_pred CCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEEC
Confidence 46788999999998 5676664 789999999999999999999998 999999999999976543 78999999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 250 (845)
++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++.
T Consensus 85 s~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 163 (290)
T 1p9a_G 85 SHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (290)
T ss_dssp CSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred CCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCcc
Confidence 999999 7888999999999999999999988888999999999999999999988888899999999999999999987
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCC
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 320 (845)
.+..|..+++|+.|+|++| +|+ .+|..+..+.+|+.|+|++|.+..
T Consensus 164 ~~~~~~~l~~L~~L~L~~N-----------------------~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 164 PAGLLNGLENLDTLLLQEN-----------------------SLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTTTTTCTTCCEEECCSS-----------------------CCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CHHHhcCcCCCCEEECCCC-----------------------cCC-ccChhhcccccCCeEEeCCCCccC
Confidence 7777788887777655554 454 456666677889999999998873
No 204
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=1.9e-23 Score=228.82 Aligned_cols=154 Identities=26% Similarity=0.457 Sum_probs=129.1
Q ss_pred HHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcC--CCCceeeEEEEEEeC----
Q 003134 671 IKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ--QHPNLVKLYGCCVEG---- 744 (845)
Q Consensus 671 l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~---- 744 (845)
.....++|+..+.||+|+||.||+|++. ++.||||++... ....+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3444578999999999999999999985 899999998543 234555566666554 999999999999987
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEeCCCCCCCEEecCCCcE
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS-----RIKIVHRDIKTSNVLLDKDLNA 819 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~ivHrDLKp~NILld~~~~~ 819 (845)
+..++||||+++|+|.++++.. .+++.++..++.|++.||+|||+++ .++|+||||||+|||++.++.+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CceEEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7899999999999999999542 5899999999999999999999871 1239999999999999999999
Q ss_pred EEEeeccceecCCCC
Q 003134 820 KISDFGLAKLYEEDK 834 (845)
Q Consensus 820 kl~DFGla~~~~~~~ 834 (845)
||+|||+|+.+....
T Consensus 182 kl~Dfg~a~~~~~~~ 196 (337)
T 3mdy_A 182 CIADLGLAVKFISDT 196 (337)
T ss_dssp EECCCTTCEECC---
T ss_pred EEEeCCCceeecccc
Confidence 999999998775433
No 205
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.90 E-value=1.1e-23 Score=224.76 Aligned_cols=149 Identities=28% Similarity=0.458 Sum_probs=132.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457888999999999999999976 47799999986542 23356789999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999998543 36899999999999999999999986 999999999999999999999999998765
Q ss_pred C
Q 003134 831 E 831 (845)
Q Consensus 831 ~ 831 (845)
.
T Consensus 160 ~ 160 (279)
T 3fdn_A 160 P 160 (279)
T ss_dssp -
T ss_pred C
Confidence 4
No 206
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.90 E-value=2.5e-23 Score=226.61 Aligned_cols=148 Identities=33% Similarity=0.538 Sum_probs=131.5
Q ss_pred CCCCCcccccCcEEEEEEEEC-----CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC--CEEEE
Q 003134 678 FDPANKVGEGGFGSVYKGILS-----DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLLL 749 (845)
Q Consensus 678 y~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 749 (845)
|+..+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 58899999997653 23456789999999999999999999999884 68899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999543 4899999999999999999999997 99999999999999999999999999998
Q ss_pred cCCCC
Q 003134 830 YEEDK 834 (845)
Q Consensus 830 ~~~~~ 834 (845)
+....
T Consensus 184 ~~~~~ 188 (318)
T 3lxp_A 184 VPEGH 188 (318)
T ss_dssp CCTTC
T ss_pred ccccc
Confidence 86543
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.90 E-value=2.9e-23 Score=222.96 Aligned_cols=151 Identities=30% Similarity=0.400 Sum_probs=132.0
Q ss_pred CCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccC
Q 003134 677 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~ 755 (845)
+|.....||+|+||.||+|+.. +++.||+|.+........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 3555669999999999999975 588999999977655566789999999999999999999999999999999999999
Q ss_pred CCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC-CCcEEEEeeccceecCC
Q 003134 756 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK-DLNAKISDFGLAKLYEE 832 (845)
Q Consensus 756 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~-~~~~kl~DFGla~~~~~ 832 (845)
+++|.+++..... ...+++..+..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||+++....
T Consensus 103 ~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 103 GGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp EEEHHHHHHHTTC--CCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred CCCHHHHHHhhcc--CCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999965422 235678899999999999999999987 999999999999987 89999999999998754
No 208
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.90 E-value=5.3e-24 Score=232.69 Aligned_cols=151 Identities=30% Similarity=0.503 Sum_probs=129.5
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCc----EEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|+..+.||+|+||.||+|++. +++ .||+|.+.... ....+++.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999975 344 37888875442 333456788999999999999999999886 456899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.
T Consensus 92 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR----GALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEECCTTCBSHHHHHSSG----GGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEeCCCCCHHHHHHHcc----ccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999996542 36889999999999999999999997 99999999999999999999999999998
Q ss_pred cCCCC
Q 003134 830 YEEDK 834 (845)
Q Consensus 830 ~~~~~ 834 (845)
+....
T Consensus 165 ~~~~~ 169 (325)
T 3kex_A 165 LPPDD 169 (325)
T ss_dssp SCCCT
T ss_pred cCccc
Confidence 75543
No 209
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.90 E-value=2.1e-23 Score=222.87 Aligned_cols=151 Identities=26% Similarity=0.427 Sum_probs=133.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999976 58999999986543 233467889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc---EEEEeeccce
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDFGLAK 828 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~---~kl~DFGla~ 828 (845)
||+++++|.+.+... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||++.
T Consensus 85 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999888543 36899999999999999999999997 999999999999986655 9999999998
Q ss_pred ecCCC
Q 003134 829 LYEED 833 (845)
Q Consensus 829 ~~~~~ 833 (845)
.....
T Consensus 157 ~~~~~ 161 (284)
T 3kk8_A 157 EVNDS 161 (284)
T ss_dssp ECCSS
T ss_pred EcccC
Confidence 87643
No 210
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=1.1e-23 Score=231.92 Aligned_cols=158 Identities=28% Similarity=0.439 Sum_probs=134.0
Q ss_pred HhcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCccc-ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCC
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGN 745 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 745 (845)
..++|...+.||+|+||.||+|++ .++..||+|+++... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346788899999999999999996 235689999997542 33457899999999999 9999999999999999
Q ss_pred EEEEEEeccCCCChhhhhhcCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCC
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTE------------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIK 807 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~------------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLK 807 (845)
..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+++ |+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 999999999999999999764321 0124899999999999999999999987 9999999
Q ss_pred CCCEEecCCCcEEEEeeccceecCCCC
Q 003134 808 TSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 808 p~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
|+|||++.++.+||+|||+++......
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~ 226 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDS 226 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCT
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCc
Confidence 999999999999999999999775443
No 211
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=8.6e-24 Score=233.12 Aligned_cols=154 Identities=31% Similarity=0.515 Sum_probs=127.7
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc-----chHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-----GNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 745 (845)
....++|+..+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344578999999999999999999975 5899999999754221 1347889999999999999999999999999
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
..++||||+++ +|.+++.... ..+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNS----LVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCC----SSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCG
T ss_pred ceEEEEEcCCC-CHHHHHHhcC----cCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecc
Confidence 99999999986 8888885532 36889999999999999999999997 9999999999999999999999999
Q ss_pred cceecCCC
Q 003134 826 LAKLYEED 833 (845)
Q Consensus 826 la~~~~~~ 833 (845)
+|+.+...
T Consensus 158 ~a~~~~~~ 165 (346)
T 1ua2_A 158 LAKSFGSP 165 (346)
T ss_dssp GGSTTTSC
T ss_pred cceeccCC
Confidence 99987543
No 212
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=6e-25 Score=243.99 Aligned_cols=248 Identities=16% Similarity=0.159 Sum_probs=199.7
Q ss_pred EEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcc----ccccccc-ccceeEeecccCCCCCCcccccC-----CC
Q 003134 120 QLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFP----KVLTNIT-TLKNLSIEGNLFTGSIPPDIRKL-----IN 188 (845)
Q Consensus 120 ~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~ 188 (845)
.++|+.|.+++.+|..+... +|++|+|++|+|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999999888877 59999999999998887 7788888 89999999999998888888776 99
Q ss_pred ccEEEeecCcCcccCChhhh----CC-CCCCcEEeecCcCcccCchhhcC-----CcccceEEecCCcCCCCc----chh
Q 003134 189 LQKLILSSNSFTGELPAELT----KL-TNLNDLRISDNNFSGKIPEFIGK-----WKKIQKLHIQGSSLEGPI----PAS 254 (845)
Q Consensus 189 L~~L~Ls~N~l~g~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~g~~----p~~ 254 (845)
|++|+|++|++++..+..+. .+ ++|++|+|++|+|++..+..+.. .++|++|+|++|+++... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999977776544 44 89999999999999877765543 369999999999999644 445
Q ss_pred hhcCC-CCCEEEcCCCCCCCCCCcccc----c--CCccEEEccCCcCccc----CcccccC-CCCcCEEeCCCCCCCCCC
Q 003134 255 ISALT-SLTDLRISDLKGSESAFPKLD----K--MNLKTLILTKCLIHGE----IPDYIGD-MTKLKNIDLSFNNLTGGI 322 (845)
Q Consensus 255 ~~~l~-~L~~L~Ls~n~~~~~~~~~l~----~--~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~g~~ 322 (845)
+..++ +|+.|+|++|.++......+. . .+|+.|+|++|.|++. ++..+.. .++|++|||++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 56665 999999999999876654332 2 3899999999999874 4555555 459999999999999776
Q ss_pred chh----hhcCCCcCEEEccCCcccCCCChhh---------hcCCceEEeecCCCcCC
Q 003134 323 PTT----FEKLAKTNFMYLTGNKLTGPVPKYI---------FNSNKNVDISLNNFTWE 367 (845)
Q Consensus 323 p~~----~~~l~~L~~L~L~~N~l~g~ip~~~---------~~~l~~L~ls~N~l~~~ 367 (845)
+.. +..+++|+.|+|++|.+.+..+..+ ...|+.||+++|++...
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 643 4667899999999999775444322 12578899999987654
No 213
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.89 E-value=1.6e-23 Score=222.74 Aligned_cols=150 Identities=33% Similarity=0.496 Sum_probs=134.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357888999999999999999986 689999999875432 335788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 86 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred ecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 99999999998543 35899999999999999999999987 99999999999999999999999999987643
No 214
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=4.7e-25 Score=246.99 Aligned_cols=240 Identities=19% Similarity=0.272 Sum_probs=143.3
Q ss_pred cCCccccCCCCCCEEeccCCcccCCCccc----cccc-ceeEEEecCC---CCCCCccccc-------ccccccceeEee
Q 003134 107 TLPTELSKLRYLKQLDLSRNCLTGSFSPQ----WASL-QLVELSVMGN---RLSGPFPKVL-------TNITTLKNLSIE 171 (845)
Q Consensus 107 ~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~----~~~l-~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls 171 (845)
.++..+..+++|++|+|++|+|+...+.. +..+ +|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 45667778888888888888888764433 4444 6777777774 4445555544 566777777777
Q ss_pred cccCCC----CCCcccccCCCccEEEeecCcCcccCChhhh----CC---------CCCCcEEeecCcCc-ccCc---hh
Q 003134 172 GNLFTG----SIPPDIRKLINLQKLILSSNSFTGELPAELT----KL---------TNLNDLRISDNNFS-GKIP---EF 230 (845)
Q Consensus 172 ~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~~ 230 (845)
+|+|++ .+|..+..+++|++|+|++|+|+...+..+. .+ ++|++|+|++|+|+ +.+| ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777775 3566677777777777777777644333333 33 67777777777776 3344 35
Q ss_pred hcCCcccceEEecCCcCC--C---CcchhhhcCCCCCEEEcCCCCCCC----CCCccccc-CCccEEEccCCcCccc---
Q 003134 231 IGKWKKIQKLHIQGSSLE--G---PIPASISALTSLTDLRISDLKGSE----SAFPKLDK-MNLKTLILTKCLIHGE--- 297 (845)
Q Consensus 231 ~~~l~~L~~L~Ls~N~l~--g---~~p~~~~~l~~L~~L~Ls~n~~~~----~~~~~l~~-~~L~~L~Ls~N~l~~~--- 297 (845)
+..+++|++|+|++|+++ | ..|..+..+++|+.|+|++|.++. ..+..+.. .+|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 566777777777777776 2 234366666666666666655531 11111211 2455555555555544
Q ss_pred -Cccccc--CCCCcCEEeCCCCCCCC----CCchhh-hcCCCcCEEEccCCcccCCC
Q 003134 298 -IPDYIG--DMTKLKNIDLSFNNLTG----GIPTTF-EKLAKTNFMYLTGNKLTGPV 346 (845)
Q Consensus 298 -~p~~~~--~l~~L~~L~Ls~N~l~g----~~p~~~-~~l~~L~~L~L~~N~l~g~i 346 (845)
+|..+. .+++|+.|+|++|+|++ .+|..+ .++++|++|+|++|++++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 334442 25555555555555554 244444 44555555555555555444
No 215
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.5e-23 Score=220.26 Aligned_cols=185 Identities=20% Similarity=0.265 Sum_probs=159.4
Q ss_pred ceeecCCCCcceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccc
Q 003134 82 NVTCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLT 160 (845)
Q Consensus 82 ~v~C~~~~~~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~ 160 (845)
|++|.. ..+.+++++++++ .+|..+. ++|+.|+|++|++++..+..|..+ +|++|+|++|+|++..+..|.
T Consensus 9 gC~C~~-----~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 80 (251)
T 3m19_A 9 GCTCNE-----GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD 80 (251)
T ss_dssp SSEEEG-----GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTT
T ss_pred ceEcCC-----CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhc
Confidence 566642 2346899999998 5676665 689999999999999999888888 899999999999998888899
Q ss_pred cccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceE
Q 003134 161 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240 (845)
Q Consensus 161 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (845)
++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|
T Consensus 81 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 160 (251)
T 3m19_A 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTL 160 (251)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEE
Confidence 99999999999999998777888999999999999999997777778899999999999999998777789999999999
Q ss_pred EecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCC
Q 003134 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSES 274 (845)
Q Consensus 241 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~ 274 (845)
+|++|+|++..+..|..+++|+.|++++|.+...
T Consensus 161 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 161 SLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9999999988888888888888887777776543
No 216
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.89 E-value=1.5e-23 Score=229.35 Aligned_cols=170 Identities=24% Similarity=0.367 Sum_probs=140.4
Q ss_pred ccccccCcccHHHHHHHhcCCCCC-CcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcC-CCC
Q 003134 658 GLDLQTGLYTLRQIKAATNNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQ-QHP 732 (845)
Q Consensus 658 ~~~~~~~~~~~~~l~~~~~~y~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~ 732 (845)
+++...+-..++......+.|... +.||+|+||.||+|+.. +++.||+|+++... .....++.+|+.++.++ +||
T Consensus 10 ~~~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 89 (327)
T 3lm5_A 10 GVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89 (327)
T ss_dssp ------CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCT
T ss_pred cccccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCC
Confidence 445555555566666777778777 88999999999999986 58999999997643 33467899999999999 569
Q ss_pred ceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEE
Q 003134 733 NLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVL 812 (845)
Q Consensus 733 nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NIL 812 (845)
||+++++++...+..++||||+++|+|.+++.... ...+++.++..++.|++.||+|||+++ |+||||||+|||
T Consensus 90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl 163 (327)
T 3lm5_A 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL---AEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNIL 163 (327)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEE
Confidence 99999999999999999999999999999985432 236899999999999999999999997 999999999999
Q ss_pred ecC---CCcEEEEeeccceecCCC
Q 003134 813 LDK---DLNAKISDFGLAKLYEED 833 (845)
Q Consensus 813 ld~---~~~~kl~DFGla~~~~~~ 833 (845)
++. ++.+||+|||+++.....
T Consensus 164 ~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 164 LSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCCCcEEEeeCccccccCCc
Confidence 987 789999999999987543
No 217
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.89 E-value=9.9e-24 Score=238.88 Aligned_cols=151 Identities=26% Similarity=0.412 Sum_probs=128.8
Q ss_pred HHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--------cchHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 003134 673 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (845)
Q Consensus 673 ~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 743 (845)
...++|...+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 34678999999999999999999975 589999999865421 11235789999999999999999999975
Q ss_pred CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC---CcEE
Q 003134 744 GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAK 820 (845)
Q Consensus 744 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~---~~~k 820 (845)
.+..++||||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.+ +.+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~k 282 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIK 282 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEE
T ss_pred cCceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEE
Confidence 55689999999999999988543 36899999999999999999999997 9999999999999654 4599
Q ss_pred EEeeccceecCC
Q 003134 821 ISDFGLAKLYEE 832 (845)
Q Consensus 821 l~DFGla~~~~~ 832 (845)
|+|||+|+....
T Consensus 283 l~DFG~a~~~~~ 294 (419)
T 3i6u_A 283 ITDFGHSKILGE 294 (419)
T ss_dssp ECCSSTTTSCC-
T ss_pred EeecccceecCC
Confidence 999999998754
No 218
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.89 E-value=2.3e-24 Score=251.73 Aligned_cols=151 Identities=31% Similarity=0.554 Sum_probs=134.3
Q ss_pred HhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
..++|+..+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|+||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456788889999999999999999888889999997653 346789999999999999999999999865 678999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+++|+|.+++... ....+++.+++.|+.||+.||+|||+++ |+||||||+|||+++++.+||+|||+++.+..
T Consensus 343 ~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 343 MSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp CTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred hcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 9999999999542 1235899999999999999999999987 99999999999999999999999999987643
No 219
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.89 E-value=2.1e-23 Score=231.84 Aligned_cols=158 Identities=24% Similarity=0.427 Sum_probs=138.5
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--------cchHHHHHHHHHHhcC-CCCceeeE
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQ-QHPNLVKL 737 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~l 737 (845)
........++|+..+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++.++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444555678999999999999999999986 699999999865431 1135678899999998 89999999
Q ss_pred EEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC
Q 003134 738 YGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL 817 (845)
Q Consensus 738 ~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~ 817 (845)
++++...+..++||||+++++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNM 237 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTC
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCC
Confidence 99999999999999999999999998532 36899999999999999999999987 99999999999999999
Q ss_pred cEEEEeeccceecCCC
Q 003134 818 NAKISDFGLAKLYEED 833 (845)
Q Consensus 818 ~~kl~DFGla~~~~~~ 833 (845)
.+||+|||+++.+...
T Consensus 238 ~ikl~DfG~~~~~~~~ 253 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPG 253 (365)
T ss_dssp CEEECCCTTCEECCTT
T ss_pred CEEEEecCcccccCCC
Confidence 9999999999987643
No 220
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.89 E-value=1.2e-23 Score=233.36 Aligned_cols=158 Identities=26% Similarity=0.426 Sum_probs=133.7
Q ss_pred cHHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccccc-----------chHHHHHHHHHHhcCCCCcee
Q 003134 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNLV 735 (845)
Q Consensus 667 ~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv 735 (845)
.+.++....++|...+.||+|+||.||+|...+++.||||++...... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778888999999999999999999999888999999998654221 127889999999999999999
Q ss_pred eEEEEEEeC-----CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCC
Q 003134 736 KLYGCCVEG-----NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSN 810 (845)
Q Consensus 736 ~l~~~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~N 810 (845)
++++++... ...++||||++ |+|.+.+.... ..+++.++..++.||+.||+|||+++ |+||||||+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 164 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR----IVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGN 164 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGG
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHH
Confidence 999998643 36899999998 58888886432 36899999999999999999999997 9999999999
Q ss_pred EEecCCCcEEEEeeccceecCC
Q 003134 811 VLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 811 ILld~~~~~kl~DFGla~~~~~ 832 (845)
||++.++.+||+|||+|+....
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~ 186 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTA 186 (362)
T ss_dssp EEECTTCCEEECCTTC------
T ss_pred EEEcCCCCEEEEecCccccccc
Confidence 9999999999999999986543
No 221
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.89 E-value=1e-23 Score=232.74 Aligned_cols=149 Identities=28% Similarity=0.509 Sum_probs=131.0
Q ss_pred cCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccc---cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSR---QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
+.|...+.||+|+||.||+|+. .+++.||||++..... ...+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477889999999999999997 4689999999865422 23457889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+. |+|.+.+... ...+++.++..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9998 5788877432 236899999999999999999999997 9999999999999999999999999998775
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 206 ~ 206 (348)
T 1u5q_A 206 P 206 (348)
T ss_dssp S
T ss_pred C
Confidence 4
No 222
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.89 E-value=3.7e-24 Score=238.07 Aligned_cols=153 Identities=31% Similarity=0.420 Sum_probs=131.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcc-cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
.++|...+.||+|+||.||+|++. +++.||||+++.. ......++.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888999999999999999953 3678999999754 234456789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC---cEEEE
Q 003134 748 LLVYEYMKNNCLSRAIFGKDT--EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL---NAKIS 822 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~---~~kl~ 822 (845)
++||||+++|+|.+++..... .....+++.+++.++.||+.||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999965422 12235899999999999999999999997 99999999999999555 59999
Q ss_pred eeccceec
Q 003134 823 DFGLAKLY 830 (845)
Q Consensus 823 DFGla~~~ 830 (845)
|||+|+.+
T Consensus 227 DFG~a~~~ 234 (367)
T 3l9p_A 227 DFGMARDI 234 (367)
T ss_dssp CCHHHHHH
T ss_pred CCcccccc
Confidence 99999865
No 223
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.89 E-value=8.1e-24 Score=231.43 Aligned_cols=151 Identities=30% Similarity=0.615 Sum_probs=127.4
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCc----EEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
++|+..+.||+|+||.||+|++. +++ .||+|.++... ....+++.+|++++++++||||+++++++...+ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46888899999999999999964 343 46888886543 345678999999999999999999999998765 788
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.
T Consensus 94 v~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCTTCBHHHHHHHST----TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeE
Confidence 999999999999996542 36899999999999999999999997 99999999999999999999999999998
Q ss_pred cCCCC
Q 003134 830 YEEDK 834 (845)
Q Consensus 830 ~~~~~ 834 (845)
+....
T Consensus 167 ~~~~~ 171 (327)
T 3poz_A 167 LGAEE 171 (327)
T ss_dssp HTTTC
T ss_pred ccCCc
Confidence 75443
No 224
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.89 E-value=1.6e-23 Score=229.71 Aligned_cols=156 Identities=26% Similarity=0.472 Sum_probs=134.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC--------CCcEEEEEEcCccc-ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeC
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEG 744 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 744 (845)
.++|...+.||+|+||.||+|++. ++..||+|+++... ....+++.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467888999999999999999863 46789999997653 23356789999999999 999999999999999
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcc-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTE-----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl 813 (845)
+..++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+++ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 9999999999999999999764321 1235899999999999999999999997 9999999999999
Q ss_pred cCCCcEEEEeeccceecCCC
Q 003134 814 DKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 814 d~~~~~kl~DFGla~~~~~~ 833 (845)
+.++.+||+|||+++.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~ 210 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNI 210 (334)
T ss_dssp CTTCCEEECCCTTCEECTTT
T ss_pred cCCCCEEEcccccccccccc
Confidence 99999999999999987643
No 225
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.89 E-value=9.6e-24 Score=232.46 Aligned_cols=161 Identities=24% Similarity=0.369 Sum_probs=132.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCC--CceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV 750 (845)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++| +||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 35688899999999999999999889999999986542 2334678999999999987 9999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|| +.+|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++ ++.+||+|||+|+.+
T Consensus 88 ~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EC-CCSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred Ee-CCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99 5678999999653 36899999999999999999999997 99999999999997 678999999999987
Q ss_pred CCCCce-eeeeeccCC
Q 003134 831 EEDKTH-ISTRIAGTM 845 (845)
Q Consensus 831 ~~~~~~-~~t~~~GT~ 845 (845)
...... ..+...||+
T Consensus 158 ~~~~~~~~~~~~~gt~ 173 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTV 173 (343)
T ss_dssp ------------CCCC
T ss_pred CcccccccCCCCcCCc
Confidence 544322 222345553
No 226
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.89 E-value=1.8e-23 Score=235.29 Aligned_cols=146 Identities=25% Similarity=0.340 Sum_probs=124.3
Q ss_pred cCCCCC-CcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHh-cCCCCceeeEEEEEEe----CCEEE
Q 003134 676 NNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMIS-AQQHPNLVKLYGCCVE----GNQLL 748 (845)
Q Consensus 676 ~~y~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~----~~~~~ 748 (845)
++|... +.||+|+||+||+|... +++.||||+++. ...+.+|++++. ..+||||+++++++.. .+..|
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 455555 68999999999999986 589999999853 246778888874 4589999999999876 56789
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEEeec
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFG 825 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~DFG 825 (845)
+||||+++|+|.+++.... ...+++.++..|+.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 136 lv~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeCCCCcHHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecc
Confidence 9999999999999997642 236899999999999999999999987 999999999999997 7899999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 210 ~a~~~~~ 216 (400)
T 1nxk_A 210 FAKETTS 216 (400)
T ss_dssp TCEECC-
T ss_pred cccccCC
Confidence 9997754
No 227
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=9.6e-23 Score=240.54 Aligned_cols=239 Identities=27% Similarity=0.318 Sum_probs=200.6
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|+++.+ .+ +|++|+|++|+|++. |. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCC-CC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCC-CC---CCCCcCEEEC
Confidence 57899999999999 4666 67999999999999997544 44 899999999999975 43 5789999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCC
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 250 (845)
++|+|++ +|.. +++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999995 6654 4899999999999995 454 35789999999999995 56 557899999999999996
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCC
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLA 330 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 330 (845)
+|.. +++|+.|++++|.++..+.. ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .++
T Consensus 196 l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~ 261 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPS 261 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCT
T ss_pred CCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccc
Confidence 4432 47899999999999876532 2489999999999997 55 45689999999999999 4565 678
Q ss_pred CcCEEEccCCcccCCCChhhh--cCCceEEeecCCCcCCCCC
Q 003134 331 KTNFMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSD 370 (845)
Q Consensus 331 ~L~~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p~ 370 (845)
+|+.|+|++|+|+ .+|..+. .+|+.|+|++|.+++.+|.
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 9999999999999 7888774 4899999999999877664
No 228
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.89 E-value=8.7e-24 Score=229.06 Aligned_cols=157 Identities=29% Similarity=0.468 Sum_probs=136.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCcccc-cchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 746 (845)
.++|...+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45788899999999999999985 2468999999976533 3357889999999999 99999999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcc-------------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTE-------------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl 813 (845)
.++||||+++|+|.+++...... ....+++.++.+++.|+++||+|||+++ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 99999999999999999754321 1235899999999999999999999997 9999999999999
Q ss_pred cCCCcEEEEeeccceecCCCC
Q 003134 814 DKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 814 d~~~~~kl~DFGla~~~~~~~ 834 (845)
+.++.+||+|||+++......
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~ 199 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDS 199 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCT
T ss_pred cCCCCEEEccccccccccccc
Confidence 999999999999999876543
No 229
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=228.71 Aligned_cols=152 Identities=32% Similarity=0.548 Sum_probs=134.0
Q ss_pred cCCCCCCcccccCcEEEEEEEE-----CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC--EEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGIL-----SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN--QLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~ 748 (845)
++|+..+.||+|+||.||+|++ .+++.||+|++........+++.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577889999999999999984 358899999998765556678999999999999999999999987654 689
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 121 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHK----ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEECCCTTCBHHHHHHHST----TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEECCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 9999999999999996542 35899999999999999999999987 9999999999999999999999999999
Q ss_pred ecCCCC
Q 003134 829 LYEEDK 834 (845)
Q Consensus 829 ~~~~~~ 834 (845)
......
T Consensus 194 ~~~~~~ 199 (326)
T 2w1i_A 194 VLPQDK 199 (326)
T ss_dssp ECCSSC
T ss_pred hccccc
Confidence 886543
No 230
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.89 E-value=2.9e-23 Score=221.66 Aligned_cols=149 Identities=24% Similarity=0.380 Sum_probs=133.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc------cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999986 589999999865421 23578999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC----cEEEEee
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL----NAKISDF 824 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~----~~kl~DF 824 (845)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999998542 36899999999999999999999987 99999999999998877 8999999
Q ss_pred ccceecCC
Q 003134 825 GLAKLYEE 832 (845)
Q Consensus 825 Gla~~~~~ 832 (845)
|+++....
T Consensus 157 g~~~~~~~ 164 (283)
T 3bhy_A 157 GIAHKIEA 164 (283)
T ss_dssp TTCEECC-
T ss_pred ccceeccC
Confidence 99998754
No 231
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.89 E-value=2.2e-23 Score=241.20 Aligned_cols=151 Identities=30% Similarity=0.506 Sum_probs=129.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|+.. ++..||+|++.... ......+.+|++++++++||||+++++++...+..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 346888999999999999999986 58899999997643 334678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEEeeccce
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFGLAK 828 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~DFGla~ 828 (845)
||+++|+|.+.+... ..+++.++..++.||+.||+|||+++ |+||||||+|||++. ++.+||+|||+|+
T Consensus 116 e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999988543 36899999999999999999999997 999999999999976 4559999999999
Q ss_pred ecCCC
Q 003134 829 LYEED 833 (845)
Q Consensus 829 ~~~~~ 833 (845)
.+...
T Consensus 188 ~~~~~ 192 (494)
T 3lij_A 188 VFENQ 192 (494)
T ss_dssp ECBTT
T ss_pred ECCCC
Confidence 88654
No 232
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.89 E-value=3.8e-23 Score=223.26 Aligned_cols=149 Identities=31% Similarity=0.521 Sum_probs=134.9
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
+.|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46888999999999999999975 58999999997553 34467899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
+++++|.+++.. ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 102 ~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 102 LGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred CCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999853 26899999999999999999999997 999999999999999999999999999887543
No 233
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.89 E-value=2.4e-23 Score=225.39 Aligned_cols=152 Identities=31% Similarity=0.544 Sum_probs=128.0
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-----ccchHHHHHHHHHHhcC---CCCceeeEEEEEEeC
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-----RQGNREFVNEIGMISAQ---QHPNLVKLYGCCVEG 744 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~ 744 (845)
..++|+..+.||+|+||+||+|+.. +++.||+|+++... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999974 68999999986432 12235677788877766 499999999999876
Q ss_pred C-----EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcE
Q 003134 745 N-----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 819 (845)
Q Consensus 745 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~ 819 (845)
. ..++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP---PGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCE
Confidence 5 5899999997 599999865432 24899999999999999999999997 9999999999999999999
Q ss_pred EEEeeccceecCC
Q 003134 820 KISDFGLAKLYEE 832 (845)
Q Consensus 820 kl~DFGla~~~~~ 832 (845)
||+|||+|+.+..
T Consensus 160 kl~Dfg~a~~~~~ 172 (308)
T 3g33_A 160 KLADFGLARIYSY 172 (308)
T ss_dssp EECSCSCTTTSTT
T ss_pred EEeeCccccccCC
Confidence 9999999987754
No 234
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.89 E-value=2.9e-24 Score=231.59 Aligned_cols=148 Identities=29% Similarity=0.455 Sum_probs=121.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhc--CCCCceeeEEEEEEeCC----EEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEGN----QLL 748 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~ 748 (845)
.++|...+.||+|+||.||+|++. ++.||||++... ...++.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999874 889999998643 34677788888887 79999999999998776 899
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeCCCCCCCEEecCCCcEE
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVLLDKDLNAK 820 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~ivHrDLKp~NILld~~~~~k 820 (845)
+||||+++|+|.+++... .+++.++..++.|++.||+||| +.+ |+||||||+|||++.++.+|
T Consensus 78 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEE
Confidence 999999999999999542 5788899999999999999999 665 99999999999999999999
Q ss_pred EEeeccceecCCCCc
Q 003134 821 ISDFGLAKLYEEDKT 835 (845)
Q Consensus 821 l~DFGla~~~~~~~~ 835 (845)
|+|||+|+.......
T Consensus 149 l~DFg~a~~~~~~~~ 163 (303)
T 3gxj_A 149 IADLGLAVRHDSATD 163 (303)
T ss_dssp BCCCCC-CCEETTTT
T ss_pred EeecCcceeccCCCc
Confidence 999999987765443
No 235
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.89 E-value=3.3e-23 Score=240.37 Aligned_cols=151 Identities=31% Similarity=0.514 Sum_probs=131.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-------------cchHHHHHHHHHHhcCCCCceeeEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-------------QGNREFVNEIGMISAQQHPNLVKLYGC 740 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~ 740 (845)
.++|...++||+|+||+||+|+.. +++.||+|++..... ...+++.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467889999999999999999986 488999999865421 235678999999999999999999999
Q ss_pred EEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC---
Q 003134 741 CVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL--- 817 (845)
Q Consensus 741 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~--- 817 (845)
+.+.+..++||||+++|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~ 186 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLL 186 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCc
Confidence 99999999999999999999988543 36899999999999999999999997 99999999999998776
Q ss_pred cEEEEeeccceecCCC
Q 003134 818 NAKISDFGLAKLYEED 833 (845)
Q Consensus 818 ~~kl~DFGla~~~~~~ 833 (845)
.+||+|||+|+.+...
T Consensus 187 ~~kl~Dfg~a~~~~~~ 202 (504)
T 3q5i_A 187 NIKIVDFGLSSFFSKD 202 (504)
T ss_dssp SEEECCCTTCEECCTT
T ss_pred cEEEEECCCCEEcCCC
Confidence 6999999999988654
No 236
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.89 E-value=1.4e-23 Score=231.21 Aligned_cols=151 Identities=24% Similarity=0.421 Sum_probs=134.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccc-----------------hHHHHHHHHHHhcCCCCceeeE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQG-----------------NREFVNEIGMISAQQHPNLVKL 737 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l 737 (845)
.++|...+.||+|+||.||+|.. +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788999999999999999999 89999999997542221 1789999999999999999999
Q ss_pred EEEEEeCCEEEEEEeccCCCChhhh------hhcCCcccccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeCCCCCCC
Q 003134 738 YGCCVEGNQLLLVYEYMKNNCLSRA------IFGKDTEYRLKLDWPTRKKICIGIARGLAYLHE-DSRIKIVHRDIKTSN 810 (845)
Q Consensus 738 ~~~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~ivHrDLKp~N 810 (845)
++++...+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ .+ |+||||||+|
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~N 182 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSN 182 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGG
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHh
Confidence 9999999999999999999999998 4332 13478999999999999999999999 76 9999999999
Q ss_pred EEecCCCcEEEEeeccceecCC
Q 003134 811 VLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 811 ILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++.++.+||+|||+++....
T Consensus 183 il~~~~~~~kl~dfg~~~~~~~ 204 (348)
T 2pml_X 183 ILMDKNGRVKLSDFGESEYMVD 204 (348)
T ss_dssp EEECTTSCEEECCCTTCEECBT
T ss_pred EEEcCCCcEEEecccccccccc
Confidence 9999999999999999998644
No 237
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=3e-23 Score=222.27 Aligned_cols=151 Identities=32% Similarity=0.539 Sum_probs=131.5
Q ss_pred cCCCCCC-cccccCcEEEEEEEEC---CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPAN-KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|...+ .||+|+||.||+|.+. ++..||+|+++... ....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4455555 8999999999999864 57889999997653 33457899999999999999999999999 55678999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EECCTTEEHHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhCC----ccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 99999999999996432 36899999999999999999999997 999999999999999999999999999988
Q ss_pred CCCC
Q 003134 831 EEDK 834 (845)
Q Consensus 831 ~~~~ 834 (845)
....
T Consensus 161 ~~~~ 164 (287)
T 1u59_A 161 GADD 164 (287)
T ss_dssp TTCS
T ss_pred ccCc
Confidence 6443
No 238
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.89 E-value=2.8e-23 Score=228.66 Aligned_cols=148 Identities=27% Similarity=0.456 Sum_probs=128.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|... +++.||+|+++.... .+.+|++++.++ +||||+++++++.+.+..|+|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 457889999999999999999986 589999999966432 234688888887 79999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC----CcEEEEeeccce
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD----LNAKISDFGLAK 828 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~----~~~kl~DFGla~ 828 (845)
|+++|+|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+|+
T Consensus 97 ~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 97 LMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred CCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999998653 35899999999999999999999997 9999999999998433 359999999999
Q ss_pred ecCCCC
Q 003134 829 LYEEDK 834 (845)
Q Consensus 829 ~~~~~~ 834 (845)
......
T Consensus 169 ~~~~~~ 174 (342)
T 2qr7_A 169 QLRAEN 174 (342)
T ss_dssp ECBCTT
T ss_pred cCcCCC
Confidence 876543
No 239
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=227.93 Aligned_cols=153 Identities=26% Similarity=0.361 Sum_probs=132.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEe----CCEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 749 (845)
.++|+..+.||+|+||.||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++.. .+..++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45788999999999999999997 4689999999876655566789999999999999999999999873 347899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++..... ....+++.+++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 108 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKD-KGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 9999999999999864211 2246899999999999999999999997 99999999999999999999999999886
Q ss_pred cC
Q 003134 830 YE 831 (845)
Q Consensus 830 ~~ 831 (845)
..
T Consensus 184 ~~ 185 (317)
T 2buj_A 184 AC 185 (317)
T ss_dssp SC
T ss_pred cc
Confidence 53
No 240
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.89 E-value=1.2e-23 Score=233.67 Aligned_cols=151 Identities=22% Similarity=0.341 Sum_probs=126.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC------CcEEEEEEcCccccc-----------chHHHHHHHHHHhcCCCCceeeE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNLVKL 737 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l 737 (845)
.++|...+.||+|+||.||+|.+.. ++.||||++...... ....+..|+..+..++|+||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999999754 478999998654321 12234556677888899999999
Q ss_pred EEEEEeC----CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe
Q 003134 738 YGCCVEG----NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 738 ~~~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl 813 (845)
++++... ...++||||+ +++|.+++.... ..+++.+++.|+.||+.||+|||+++ |+||||||+|||+
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill 185 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA----KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEE
Confidence 9998764 4589999999 999999996532 36899999999999999999999997 9999999999999
Q ss_pred c--CCCcEEEEeeccceecCCC
Q 003134 814 D--KDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 814 d--~~~~~kl~DFGla~~~~~~ 833 (845)
+ .++.+||+|||+|+.+...
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~ 207 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPE 207 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGG
T ss_pred ecCCCCeEEEEECCcceecccC
Confidence 9 8899999999999987543
No 241
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.6e-23 Score=224.38 Aligned_cols=193 Identities=23% Similarity=0.320 Sum_probs=119.0
Q ss_pred cCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
.++++|++|++++|.++... .+..+ +|++|+|++|++++..+ +..+++|++|+|++|++++. +.+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 44566666777666666532 34444 55666666666554433 55666666666666666532 24556666666
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~ 271 (845)
|+|++|++++. +. +..+++|++|+|++|++++..+ +..+++|++|+|++|++++..+ +..+++
T Consensus 112 L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~----------- 174 (308)
T 1h6u_A 112 LDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSK----------- 174 (308)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTT-----------
T ss_pred EECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCC-----------
Confidence 66666666542 22 5566666666666666654332 5555666666666666654332 444444
Q ss_pred CCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccC
Q 003134 272 SESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTG 344 (845)
Q Consensus 272 ~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g 344 (845)
|+.|+|++|++++..+ +..+++|++|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 175 ------------L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 175 ------------LTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp ------------CCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred ------------CCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 4555566666665443 6778888899999998886553 7888889999999998874
No 242
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.89 E-value=2e-23 Score=224.66 Aligned_cols=150 Identities=28% Similarity=0.512 Sum_probs=132.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEe----------
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE---------- 743 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------- 743 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 457888999999999999999975 6899999999643 3345678999999999999999999999865
Q ss_pred ---CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEE
Q 003134 744 ---GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAK 820 (845)
Q Consensus 744 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~k 820 (845)
.+..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN----LNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC----GGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc----cccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEE
Confidence 356899999999999999996532 35788899999999999999999997 99999999999999999999
Q ss_pred EEeeccceecCC
Q 003134 821 ISDFGLAKLYEE 832 (845)
Q Consensus 821 l~DFGla~~~~~ 832 (845)
|+|||+++....
T Consensus 157 l~dfg~~~~~~~ 168 (303)
T 1zy4_A 157 IGDFGLAKNVHR 168 (303)
T ss_dssp ECCCCCCSCTTC
T ss_pred EeeCcchhhccc
Confidence 999999987653
No 243
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.89 E-value=1.6e-23 Score=223.57 Aligned_cols=150 Identities=27% Similarity=0.480 Sum_probs=132.0
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEe---------
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--------- 743 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------- 743 (845)
...+|+..+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457889999999999999999986 68999999986542 456789999999999999999998864
Q ss_pred -------CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC
Q 003134 744 -------GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD 816 (845)
Q Consensus 744 -------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~ 816 (845)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDT 158 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCC
Confidence 345899999999999999996532 236899999999999999999999987 9999999999999999
Q ss_pred CcEEEEeeccceecCCC
Q 003134 817 LNAKISDFGLAKLYEED 833 (845)
Q Consensus 817 ~~~kl~DFGla~~~~~~ 833 (845)
+.+||+|||+++.....
T Consensus 159 ~~~kl~Dfg~~~~~~~~ 175 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKND 175 (284)
T ss_dssp TEEEECCCTTCEESSCC
T ss_pred CCEEECcchhheecccc
Confidence 99999999999987654
No 244
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.89 E-value=7.7e-24 Score=231.29 Aligned_cols=149 Identities=27% Similarity=0.479 Sum_probs=128.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc-chHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ-GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
++|...+.||+|+||.||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888999999999999999986 6899999999754322 122456799999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
++ |+|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 82 ~~-~~l~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG----NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CS-EEHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred cc-cCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 98 48988886542 36899999999999999999999997 99999999999999999999999999987653
No 245
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=248.63 Aligned_cols=144 Identities=31% Similarity=0.537 Sum_probs=126.6
Q ss_pred cccccCcEEEEEEEEC---CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccCCCC
Q 003134 683 KVGEGGFGSVYKGILS---DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (845)
Q Consensus 683 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~~gs 758 (845)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 46689999998653 3456789999999999999999999999976 56899999999999
Q ss_pred hhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 759 LSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 759 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
|.+++.... ..+++.++..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+..+.
T Consensus 422 L~~~l~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 422 LHKFLVGKR----EEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp HHHHHTTCT----TTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred HHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999996542 36899999999999999999999997 9999999999999999999999999999875443
No 246
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.89 E-value=2.8e-23 Score=220.86 Aligned_cols=150 Identities=29% Similarity=0.480 Sum_probs=135.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999986 68999999986542 23456889999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeeccccccc
Confidence 9999999999998543 35899999999999999999999997 999999999999999999999999999877
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 162 ~~ 163 (276)
T 2h6d_A 162 SD 163 (276)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 247
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.89 E-value=3.7e-23 Score=228.34 Aligned_cols=148 Identities=28% Similarity=0.518 Sum_probs=129.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe--------C
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE--------G 744 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------~ 744 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 57889999999999999999984 68999999986543 2335678899999999999999999999987 4
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEee
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDF 824 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DF 824 (845)
+..++||||+++ +|.+.+.... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVL----VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred ceEEEEEeccCC-CHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccc
Confidence 568999999986 7777775432 35899999999999999999999997 999999999999999999999999
Q ss_pred ccceecC
Q 003134 825 GLAKLYE 831 (845)
Q Consensus 825 Gla~~~~ 831 (845)
|+|+.+.
T Consensus 169 g~a~~~~ 175 (351)
T 3mi9_A 169 GLARAFS 175 (351)
T ss_dssp TTCEECC
T ss_pred hhccccc
Confidence 9999875
No 248
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.89 E-value=3.4e-24 Score=233.47 Aligned_cols=162 Identities=25% Similarity=0.443 Sum_probs=138.5
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEEC------CCcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEE
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGC 740 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~ 740 (845)
.++.....++|+..+.||+|+||.||+|++. +++.||+|.+..... ....++.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 3444556678999999999999999999864 367899999976432 334578999999999999999999999
Q ss_pred EEeCCEEEEEEeccCCCChhhhhhcCCcc-----cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC
Q 003134 741 CVEGNQLLLVYEYMKNNCLSRAIFGKDTE-----YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK 815 (845)
Q Consensus 741 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~ 815 (845)
+...+..++||||+++|+|.+++...... ....+++.++.+++.|++.||+|||+++ |+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcC
Confidence 99999999999999999999999653211 1135789999999999999999999997 999999999999999
Q ss_pred CCcEEEEeeccceecCC
Q 003134 816 DLNAKISDFGLAKLYEE 832 (845)
Q Consensus 816 ~~~~kl~DFGla~~~~~ 832 (845)
++.+||+|||+++....
T Consensus 174 ~~~~kl~Dfg~~~~~~~ 190 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYE 190 (322)
T ss_dssp TCCEEECCTTCCCGGGG
T ss_pred CCeEEECcCcccccccc
Confidence 99999999999987643
No 249
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.89 E-value=1.3e-23 Score=240.89 Aligned_cols=157 Identities=26% Similarity=0.381 Sum_probs=126.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc--cccchHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 745 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999975 5899999999754 233456788999999999999999999999654 4
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
..|+||||++++ |.+.+.. .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEE
Confidence 689999999875 6666532 4889999999999999999999997 9999999999999999999999999
Q ss_pred cceecCCCCceeeeeeccC
Q 003134 826 LAKLYEEDKTHISTRIAGT 844 (845)
Q Consensus 826 la~~~~~~~~~~~t~~~GT 844 (845)
+|+...... ..+..+||
T Consensus 210 ~a~~~~~~~--~~~~~~gt 226 (464)
T 3ttj_A 210 LARTAGTSF--MMTPYVVT 226 (464)
T ss_dssp CC-----CC--CC----CC
T ss_pred eeeecCCCc--ccCCCccc
Confidence 999875432 22334555
No 250
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.89 E-value=3.9e-23 Score=222.26 Aligned_cols=149 Identities=22% Similarity=0.345 Sum_probs=131.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... ..+.+.+|++++.++ +|+|++++++++...+..++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45788999999999999999997 468999999986432 334678899999999 89999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc-----EEEEeeccc
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKISDFGLA 827 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~-----~kl~DFGla 827 (845)
|+ +++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+|
T Consensus 87 ~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG----RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred ec-CCCHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 99 999999996532 35899999999999999999999987 999999999999987776 999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 159 ~~~~~~ 164 (298)
T 1csn_A 159 KFYRDP 164 (298)
T ss_dssp EESBCT
T ss_pred cccccc
Confidence 987654
No 251
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.89 E-value=1.6e-23 Score=224.75 Aligned_cols=148 Identities=32% Similarity=0.566 Sum_probs=123.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+.. ..||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467889999999999999999864 359999987553 23356789999999999999999999965 5566899999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++++|.+++.... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLHASE----TKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999996542 36899999999999999999999987 99999999999999999999999999987653
No 252
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.89 E-value=4.4e-23 Score=221.95 Aligned_cols=152 Identities=27% Similarity=0.427 Sum_probs=134.7
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---------ccchHHHHHHHHHHhcCC-CCceeeEEEEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---------RQGNREFVNEIGMISAQQ-HPNLVKLYGCCV 742 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~ 742 (845)
..++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467889999999999999999986 58999999986542 122456889999999995 999999999999
Q ss_pred eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEE
Q 003134 743 EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKIS 822 (845)
Q Consensus 743 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~ 822 (845)
..+..++||||+++++|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEEC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999542 36899999999999999999999997 9999999999999999999999
Q ss_pred eeccceecCCC
Q 003134 823 DFGLAKLYEED 833 (845)
Q Consensus 823 DFGla~~~~~~ 833 (845)
|||+++.+...
T Consensus 167 dfg~~~~~~~~ 177 (298)
T 1phk_A 167 DFGFSCQLDPG 177 (298)
T ss_dssp CCTTCEECCTT
T ss_pred cccchhhcCCC
Confidence 99999987543
No 253
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.89 E-value=1.5e-23 Score=229.41 Aligned_cols=149 Identities=26% Similarity=0.473 Sum_probs=126.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 457889999999999999999975 689999999975532 22456789999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe-----cCCCcEEEEeecc
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL-----DKDLNAKISDFGL 826 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl-----d~~~~~kl~DFGl 826 (845)
||+++ +|.+++... ..+++.++..|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+
T Consensus 113 e~~~~-~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 113 EYAEN-DLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp ECCSE-EHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred ecCCC-CHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99985 999998543 25899999999999999999999997 9999999999999 4555699999999
Q ss_pred ceecCC
Q 003134 827 AKLYEE 832 (845)
Q Consensus 827 a~~~~~ 832 (845)
|+.+..
T Consensus 184 a~~~~~ 189 (329)
T 3gbz_A 184 ARAFGI 189 (329)
T ss_dssp HHHHC-
T ss_pred ccccCC
Confidence 987753
No 254
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.89 E-value=2.3e-23 Score=228.16 Aligned_cols=149 Identities=28% Similarity=0.497 Sum_probs=129.3
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46888999999999999999986 489999999865432 224567899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 105 ~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 105 FVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp CCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred cCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999998886433 25899999999999999999999997 99999999999999999999999999987654
No 255
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=1.7e-23 Score=229.60 Aligned_cols=151 Identities=31% Similarity=0.573 Sum_probs=127.7
Q ss_pred cCCCCCCcccccCcEEEEEEEECC-----CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD-----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
.+|...+.||+|+||.||+|.... +..||+|.++... .....++.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456678899999999999998643 2469999997643 2335678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD----GEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEECCTTEEHHHHHHHTT----TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEeCCCCCcHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999996532 36899999999999999999999997 99999999999999999999999999998
Q ss_pred cCCC
Q 003134 830 YEED 833 (845)
Q Consensus 830 ~~~~ 833 (845)
....
T Consensus 197 ~~~~ 200 (333)
T 1mqb_A 197 LEDD 200 (333)
T ss_dssp ----
T ss_pred hccc
Confidence 7543
No 256
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.89 E-value=1.8e-23 Score=225.03 Aligned_cols=150 Identities=30% Similarity=0.472 Sum_probs=129.6
Q ss_pred cCCCCCCcccccCcEEEEEEEECC----CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEe-CCEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~l 749 (845)
.+|+..+.||+|+||.||+|++.+ ...||+|.+.... ....+++.+|++++++++||||+++++++.. ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999999643 3368999987643 2345678999999999999999999998654 567899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+|+.
T Consensus 105 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEECCTTCBHHHHHHCTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEeCCCCCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 999999999999996532 35799999999999999999999997 99999999999999999999999999987
Q ss_pred cCC
Q 003134 830 YEE 832 (845)
Q Consensus 830 ~~~ 832 (845)
+..
T Consensus 178 ~~~ 180 (298)
T 3f66_A 178 MYD 180 (298)
T ss_dssp CSC
T ss_pred ccc
Confidence 754
No 257
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.89 E-value=1.6e-23 Score=232.13 Aligned_cols=149 Identities=25% Similarity=0.445 Sum_probs=133.7
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357888999999999999999986 58999999997652 3335678999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+|||+++.+.
T Consensus 112 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999543 3689999999999999999999985 5 9999999999999999999999999997653
No 258
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.89 E-value=1.9e-23 Score=225.27 Aligned_cols=149 Identities=26% Similarity=0.535 Sum_probs=132.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467889999999999999999986 4899999999877666778999999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
+++++|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 98 ~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 98 CPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp CTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred CCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 9999999988542 236899999999999999999999987 999999999999999999999999997643
No 259
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.89 E-value=2e-23 Score=241.08 Aligned_cols=151 Identities=29% Similarity=0.516 Sum_probs=135.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888999999999999999986 68999999986542 34467899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeeccc
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLA 827 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla 827 (845)
|||+.+|+|.+.+... ..+++.++..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+|
T Consensus 105 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp ECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999998653 35899999999999999999999997 9999999999999 56789999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.+...
T Consensus 177 ~~~~~~ 182 (484)
T 3nyv_A 177 THFEAS 182 (484)
T ss_dssp HHBCCC
T ss_pred EEcccc
Confidence 887544
No 260
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.89 E-value=2.6e-23 Score=240.20 Aligned_cols=151 Identities=27% Similarity=0.497 Sum_probs=134.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 456889999999999999999986 68999999986542 344678999999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec---CCCcEEEEeeccce
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD---KDLNAKISDFGLAK 828 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld---~~~~~kl~DFGla~ 828 (845)
||+++|+|.+.+... ..+++.++..++.|++.||+|||+++ |+||||||+|||++ .++.+||+|||+|+
T Consensus 101 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999988543 36899999999999999999999997 99999999999995 55679999999998
Q ss_pred ecCCC
Q 003134 829 LYEED 833 (845)
Q Consensus 829 ~~~~~ 833 (845)
.+...
T Consensus 173 ~~~~~ 177 (486)
T 3mwu_A 173 CFQQN 177 (486)
T ss_dssp TBCCC
T ss_pred ECCCC
Confidence 77543
No 261
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.89 E-value=5.8e-23 Score=222.86 Aligned_cols=151 Identities=34% Similarity=0.559 Sum_probs=130.4
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
..++|+..+.||+|+||.||+|... +++.||+|.+... ...+++.+|++++.+++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567899999999999999999986 4899999998754 345788999999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+++|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 99999999998532 236899999999999999999999987 99999999999999999999999999988754
Q ss_pred C
Q 003134 833 D 833 (845)
Q Consensus 833 ~ 833 (845)
.
T Consensus 178 ~ 178 (314)
T 3com_A 178 T 178 (314)
T ss_dssp T
T ss_pred h
Confidence 3
No 262
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=2e-23 Score=232.22 Aligned_cols=148 Identities=25% Similarity=0.433 Sum_probs=124.3
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 745 (845)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888999999999999999985 58999999996542 23356788999999999999999999999865 3
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 7899999854 25899999999999999999999997 9999999999999999999999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 174 ~a~~~~~ 180 (367)
T 1cm8_A 174 LARQADS 180 (367)
T ss_dssp TCEECCS
T ss_pred ccccccc
Confidence 9998754
No 263
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.89 E-value=4.5e-23 Score=221.40 Aligned_cols=152 Identities=29% Similarity=0.470 Sum_probs=130.3
Q ss_pred hcCCCCCC-cccccCcEEEEEEEEC---CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 675 TNNFDPAN-KVGEGGFGSVYKGILS---DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 675 ~~~y~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
.++|...+ .||+|+||.||+|.+. +++.||||+++.... ...+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 35677777 8999999999999652 368899999976532 2256899999999999999999999999 667789
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999999999653 35899999999999999999999997 9999999999999999999999999999
Q ss_pred ecCCCCc
Q 003134 829 LYEEDKT 835 (845)
Q Consensus 829 ~~~~~~~ 835 (845)
.......
T Consensus 166 ~~~~~~~ 172 (291)
T 1xbb_A 166 ALRADEN 172 (291)
T ss_dssp ECCTTCS
T ss_pred eeccCCC
Confidence 8865443
No 264
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.89 E-value=7.2e-23 Score=224.85 Aligned_cols=154 Identities=29% Similarity=0.439 Sum_probs=134.2
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhc--CCCCceeeEEEEEEeCC
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISA--QQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~ 745 (845)
+.......++|...+.||+|+||.||+|+. +++.||+|++... ..+.+.+|++++.. ++||||+++++++...+
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 333345567899999999999999999998 5899999999643 34677888888887 79999999999998876
Q ss_pred ----EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEeCCCCCCCEEe
Q 003134 746 ----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--------EDSRIKIVHRDIKTSNVLL 813 (845)
Q Consensus 746 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~ivHrDLKp~NILl 813 (845)
..++||||+++|+|.+++... .+++.+++.++.|++.||+||| +.+ |+||||||+|||+
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll 180 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILV 180 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEE
T ss_pred CccceeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEE
Confidence 899999999999999999542 5899999999999999999999 554 9999999999999
Q ss_pred cCCCcEEEEeeccceecCCCC
Q 003134 814 DKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 814 d~~~~~kl~DFGla~~~~~~~ 834 (845)
+.++.+||+|||+++......
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~ 201 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSAT 201 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTT
T ss_pred CCCCCEEEEECCCceeccccc
Confidence 999999999999999876544
No 265
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.89 E-value=4e-23 Score=223.79 Aligned_cols=153 Identities=28% Similarity=0.480 Sum_probs=126.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|...+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 46888999999999999999974 68999999997532 233567889999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++.... .....+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 112 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp ECCCSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred ecCCCCCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999986421 12246899999999999999999999997 9999999999999999999999999998775
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 188 ~ 188 (310)
T 2wqm_A 188 S 188 (310)
T ss_dssp -
T ss_pred C
Confidence 4
No 266
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.89 E-value=2.7e-23 Score=219.98 Aligned_cols=151 Identities=24% Similarity=0.416 Sum_probs=132.9
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC--CEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG--NQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lV~ 751 (845)
++|...+.||+|+||.||+|++. ++.||+|+++... ....+++.+|++++++++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888999999999999999985 8899999997653 23356799999999999999999999999877 7889999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++..... ..+++.++..++.|++.||+|||+++ ++|+||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN---FVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSS---CCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 99999999999975432 25899999999999999999999874 359999999999999999999999999887654
No 267
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.89 E-value=5.3e-23 Score=219.95 Aligned_cols=149 Identities=26% Similarity=0.447 Sum_probs=133.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999986 57899999986542 233568899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 94 EFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999998543 36899999999999999999999987 9999999999999999999999999998765
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 166 ~ 166 (284)
T 2vgo_A 166 S 166 (284)
T ss_dssp S
T ss_pred c
Confidence 4
No 268
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.89 E-value=2.2e-23 Score=233.69 Aligned_cols=148 Identities=24% Similarity=0.368 Sum_probs=129.0
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCC--CCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQ--HPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.+|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3588899999999999999998889999999986542 334578899999999996 599999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
| +.+++|.+++... ..+++.++..++.||+.||+|||+++ |+||||||+|||++ ++.+||+|||+|+.+.
T Consensus 136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 5788999999653 26889999999999999999999987 99999999999995 5899999999999875
Q ss_pred CC
Q 003134 832 ED 833 (845)
Q Consensus 832 ~~ 833 (845)
..
T Consensus 206 ~~ 207 (390)
T 2zmd_A 206 PD 207 (390)
T ss_dssp --
T ss_pred CC
Confidence 44
No 269
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.89 E-value=1.2e-23 Score=228.16 Aligned_cols=166 Identities=26% Similarity=0.440 Sum_probs=139.1
Q ss_pred ccHHHHHHHhcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCcccc-cchHHHHHHHHHHhcC-CCCceeeE
Q 003134 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKL 737 (845)
Q Consensus 666 ~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l 737 (845)
+...+.....++|...+.||+|+||.||+|++ .+++.||+|+++.... ...+.+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445555667899999999999999999985 2468999999976532 3346789999999999 79999999
Q ss_pred EEEEEeCC-EEEEEEeccCCCChhhhhhcCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCC
Q 003134 738 YGCCVEGN-QLLLVYEYMKNNCLSRAIFGKDTEY-----------RLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRD 805 (845)
Q Consensus 738 ~~~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrD 805 (845)
++++...+ ..++||||+++|+|.+++....... ...+++.++..++.|++.||+|||+++ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99988754 5899999999999999997653211 123789999999999999999999987 99999
Q ss_pred CCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 806 IKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 806 LKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
|||+||+++.++.+||+|||+++.+....
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 202 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDP 202 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCT
T ss_pred CccceEEECCCCCEEECCCccccccccCc
Confidence 99999999999999999999999875443
No 270
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=228.58 Aligned_cols=157 Identities=31% Similarity=0.527 Sum_probs=135.2
Q ss_pred HHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEe---
Q 003134 669 RQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVE--- 743 (845)
Q Consensus 669 ~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~--- 743 (845)
.++....++|+..+.||+|+||.||+|+.. +++.||+|++... ....+++.+|++++.++ +||||+++++++..
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 344455778999999999999999999985 6899999998654 33457889999999998 89999999999987
Q ss_pred ---CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEE
Q 003134 744 ---GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAK 820 (845)
Q Consensus 744 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~k 820 (845)
.+..++||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence 468999999999999999996542 236899999999999999999999997 99999999999999999999
Q ss_pred EEeeccceecCC
Q 003134 821 ISDFGLAKLYEE 832 (845)
Q Consensus 821 l~DFGla~~~~~ 832 (845)
|+|||+++....
T Consensus 170 l~Dfg~~~~~~~ 181 (326)
T 2x7f_A 170 LVDFGVSAQLDR 181 (326)
T ss_dssp ECCCTTTC----
T ss_pred EeeCcCceecCc
Confidence 999999987653
No 271
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.89 E-value=6.4e-23 Score=219.54 Aligned_cols=151 Identities=33% Similarity=0.599 Sum_probs=130.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccc-------hHHHHHHHHHHhcCCCCceeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQG-------NREFVNEIGMISAQQHPNLVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 746 (845)
.++|+..+.||+|+||.||+|++. +++.||+|++....... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 357888999999999999999985 68999999996543221 267899999999999999999999986665
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc-----EEE
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-----AKI 821 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~-----~kl 821 (845)
++||||+++|+|.+.+.... ..+++..+..++.|++.||+|||+++ ++|+||||||+|||++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT----SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc----CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999999886542 36899999999999999999999985 34999999999999988776 999
Q ss_pred EeeccceecCC
Q 003134 822 SDFGLAKLYEE 832 (845)
Q Consensus 822 ~DFGla~~~~~ 832 (845)
+|||+|+....
T Consensus 171 ~Dfg~~~~~~~ 181 (287)
T 4f0f_A 171 ADFGLSQQSVH 181 (287)
T ss_dssp CCCTTCBCCSS
T ss_pred CCCCccccccc
Confidence 99999986543
No 272
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.89 E-value=1.8e-23 Score=223.24 Aligned_cols=151 Identities=27% Similarity=0.438 Sum_probs=129.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC----CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
.++|...+.||+|+||.||+|++.. +..||+|.++... ....+++.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4578889999999999999998643 3469999997653 3345789999999999999999999999764 45689
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++++|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 90 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999543 235899999999999999999999987 99999999999999999999999999987
Q ss_pred cCCC
Q 003134 830 YEED 833 (845)
Q Consensus 830 ~~~~ 833 (845)
....
T Consensus 163 ~~~~ 166 (281)
T 3cc6_A 163 IEDE 166 (281)
T ss_dssp C---
T ss_pred cccc
Confidence 7543
No 273
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.89 E-value=9e-23 Score=220.30 Aligned_cols=151 Identities=26% Similarity=0.382 Sum_probs=129.6
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc----ccchHHHHHHHHHHhcCCCCceeeEEEEEE--eCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS----RQGNREFVNEIGMISAQQHPNLVKLYGCCV--EGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~ 747 (845)
.++|...+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 58899999997642 234578999999999999999999999985 44578
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||++++ |.+++.... ...+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP---EKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST---TCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEehhccCC-HHHHHHhCc---ccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccc
Confidence 9999999987 777765432 236899999999999999999999997 999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+....
T Consensus 157 ~~~~~ 161 (305)
T 2wtk_C 157 EALHP 161 (305)
T ss_dssp EECCT
T ss_pred cccCc
Confidence 98753
No 274
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.88 E-value=1.2e-23 Score=246.55 Aligned_cols=149 Identities=20% Similarity=0.197 Sum_probs=113.6
Q ss_pred ccccCcEEEEEEE-ECCCcEEEEEEcCccc----------ccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEE
Q 003134 684 VGEGGFGSVYKGI-LSDGTVIAVKQLSSKS----------RQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 684 ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.+.|+.|.+..++ ..-|+.+|+|.+.... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666555544 2248889999986531 22346799999999999 7999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
||++|++|.++|.... +++.. +|+.||+.||+|+|+++ ||||||||+|||++++|++||+|||+|+...
T Consensus 322 Eyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999996542 45543 58999999999999997 9999999999999999999999999999886
Q ss_pred CCCceeeeeeccC
Q 003134 832 EDKTHISTRIAGT 844 (845)
Q Consensus 832 ~~~~~~~t~~~GT 844 (845)
.+.... +..+||
T Consensus 391 ~~~~~~-~t~vGT 402 (569)
T 4azs_A 391 QDCSWP-TNLVQS 402 (569)
T ss_dssp ---CCS-HHHHHH
T ss_pred CCCccc-cCceec
Confidence 544322 234555
No 275
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=1.5e-23 Score=233.46 Aligned_cols=149 Identities=30% Similarity=0.476 Sum_probs=122.3
Q ss_pred CCCCCCcccccCcEEEEEEEEC--C--CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEe-CCEEEEE
Q 003134 677 NFDPANKVGEGGFGSVYKGILS--D--GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVE-GNQLLLV 750 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lV 750 (845)
.|...+.||+|+||.||+|++. + +..||+|.++... ....++|.+|++++++++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3556789999999999999863 2 2468999987543 3345789999999999999999999998764 4678999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++|+|.+++.... ..+++.++..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+|+.+
T Consensus 170 ~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET----HNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccc
Confidence 99999999999996542 35789999999999999999999997 999999999999999999999999999876
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 243 ~~ 244 (373)
T 3c1x_A 243 YD 244 (373)
T ss_dssp --
T ss_pred cc
Confidence 43
No 276
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.9e-24 Score=242.01 Aligned_cols=237 Identities=17% Similarity=0.177 Sum_probs=195.3
Q ss_pred Cccccccc-ceeEEEecCCCCCCCcc----cccccccccceeEeecc---cCCCCCCccc-------ccCCCccEEEeec
Q 003134 132 FSPQWASL-QLVELSVMGNRLSGPFP----KVLTNITTLKNLSIEGN---LFTGSIPPDI-------RKLINLQKLILSS 196 (845)
Q Consensus 132 ~~~~~~~l-~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~g~~p~~~-------~~l~~L~~L~Ls~ 196 (845)
++..+..+ +|++|+|++|+|++..+ ..|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 33445545 89999999999997744 44778999999999996 5556667665 6899999999999
Q ss_pred CcCcc----cCChhhhCCCCCCcEEeecCcCcccCchhhcC----C---------cccceEEecCCcCC-CCcc---hhh
Q 003134 197 NSFTG----ELPAELTKLTNLNDLRISDNNFSGKIPEFIGK----W---------KKIQKLHIQGSSLE-GPIP---ASI 255 (845)
Q Consensus 197 N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----l---------~~L~~L~Ls~N~l~-g~~p---~~~ 255 (845)
|++++ .+|..+.++++|++|+|++|+|+...+..+.. + ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 99997 57888999999999999999998655544444 3 89999999999998 4555 578
Q ss_pred hcCCCCCEEEcCCCCCCCC-----CCccccc-CCccEEEccCCcCc----ccCcccccCCCCcCEEeCCCCCCCCC----
Q 003134 256 SALTSLTDLRISDLKGSES-----AFPKLDK-MNLKTLILTKCLIH----GEIPDYIGDMTKLKNIDLSFNNLTGG---- 321 (845)
Q Consensus 256 ~~l~~L~~L~Ls~n~~~~~-----~~~~l~~-~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~g~---- 321 (845)
..+++|+.|++++|.++.. ....+.. .+|+.|+|++|.|+ +.+|..+..+++|++|+|++|+|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 8999999999999998732 1213333 48999999999997 67888999999999999999999976
Q ss_pred Cchhhhc--CCCcCEEEccCCcccC----CCChhh---hcCCceEEeecCCCcCCC
Q 003134 322 IPTTFEK--LAKTNFMYLTGNKLTG----PVPKYI---FNSNKNVDISLNNFTWES 368 (845)
Q Consensus 322 ~p~~~~~--l~~L~~L~L~~N~l~g----~ip~~~---~~~l~~L~ls~N~l~~~~ 368 (845)
+|..+.. +++|+.|+|++|++++ .+|..+ ...|+.|++++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 5667744 9999999999999998 588877 368999999999888654
No 277
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.88 E-value=4.9e-23 Score=225.70 Aligned_cols=148 Identities=33% Similarity=0.550 Sum_probs=122.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHH--HhcCCCCceeeEEEEEEe-----CCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGM--ISAQQHPNLVKLYGCCVE-----GNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~-----~~~~ 747 (845)
.++|+..+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 35788899999999999999987 68999999986542 3444445444 456899999999987653 2367
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEeCCCCCCCEEecCCCcEEE
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS------RIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------~~~ivHrDLKp~NILld~~~~~kl 821 (845)
++||||+++|+|.+++... ..++..+.+++.||++||+|||+.. .++|+||||||+|||++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 8999999999999999543 3588999999999999999999881 113999999999999999999999
Q ss_pred EeeccceecCC
Q 003134 822 SDFGLAKLYEE 832 (845)
Q Consensus 822 ~DFGla~~~~~ 832 (845)
+|||+|+.+..
T Consensus 162 ~DFG~a~~~~~ 172 (336)
T 3g2f_A 162 SDFGLSMRLTG 172 (336)
T ss_dssp CCCTTCEECSS
T ss_pred eeccceeeccc
Confidence 99999998754
No 278
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.88 E-value=5.2e-23 Score=221.53 Aligned_cols=150 Identities=31% Similarity=0.562 Sum_probs=130.6
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999986 68999999997543 2334788899999999999999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|++ |+|.+++..... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~-~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL---TGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp CCS-EEHHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred ccc-CCHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 998 599999865421 35889999999999999999999997 99999999999999999999999999987653
No 279
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.88 E-value=5.3e-23 Score=224.81 Aligned_cols=152 Identities=30% Similarity=0.543 Sum_probs=130.5
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcE--EEEEEcCcc-cccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTV--IAVKQLSSK-SRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV 750 (845)
++|+..+.||+|+||.||+|+.. ++.. +|+|.++.. .....+++.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999975 4554 499988653 233456789999999999 999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcE
Q 003134 751 YEYMKNNCLSRAIFGKDT-----------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 819 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~ 819 (845)
|||+++|+|.+++..... .....+++.+++.++.|++.||+|||+++ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 999999999999976531 11246899999999999999999999987 9999999999999999999
Q ss_pred EEEeeccceec
Q 003134 820 KISDFGLAKLY 830 (845)
Q Consensus 820 kl~DFGla~~~ 830 (845)
||+|||+++..
T Consensus 182 kL~Dfg~~~~~ 192 (327)
T 1fvr_A 182 KIADFGLSRGQ 192 (327)
T ss_dssp EECCTTCEESS
T ss_pred EEcccCcCccc
Confidence 99999999854
No 280
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.88 E-value=8.2e-23 Score=219.17 Aligned_cols=150 Identities=28% Similarity=0.473 Sum_probs=129.6
Q ss_pred CCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe----CCEEEE
Q 003134 677 NFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLLL 749 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 749 (845)
.|...+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3667778999999999999975 58899999987542 3345678999999999999999999999875 356899
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCcEEEEeeccce
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAK 828 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~~kl~DFGla~ 828 (845)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ ++|+||||||+||+++ .++.+||+|||+++
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 99999999999999542 36899999999999999999999984 3599999999999998 78999999999997
Q ss_pred ecCC
Q 003134 829 LYEE 832 (845)
Q Consensus 829 ~~~~ 832 (845)
....
T Consensus 181 ~~~~ 184 (290)
T 1t4h_A 181 LKRA 184 (290)
T ss_dssp GCCT
T ss_pred cccc
Confidence 6544
No 281
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.88 E-value=4e-23 Score=225.26 Aligned_cols=149 Identities=27% Similarity=0.419 Sum_probs=127.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc--------cchHHHHHHHHHHhcCCCCceeeEEEEEEeCC
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGN 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 745 (845)
.++|...+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457889999999999999999986 488999999865421 12345889999999999999999999987665
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc---EEEE
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKIS 822 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~---~kl~ 822 (845)
.++||||+++|+|.+++... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++. +||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEEC
T ss_pred -eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEc
Confidence 89999999999999998543 36899999999999999999999987 999999999999987654 9999
Q ss_pred eeccceecCC
Q 003134 823 DFGLAKLYEE 832 (845)
Q Consensus 823 DFGla~~~~~ 832 (845)
|||+++....
T Consensus 160 Dfg~~~~~~~ 169 (322)
T 2ycf_A 160 DFGHSKILGE 169 (322)
T ss_dssp CCTTCEECCC
T ss_pred cCccceeccc
Confidence 9999998754
No 282
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.88 E-value=7.5e-23 Score=219.44 Aligned_cols=143 Identities=10% Similarity=0.019 Sum_probs=126.9
Q ss_pred cCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCccccc---chHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQ---GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|++.. ++.||+|++...... ..+++.+|++++++++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 568889999999999999999864 899999999765332 2468899999999999999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
||+++++|.+++... ....++.+|+.|++.||+|||+++ |+||||||+|||++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999998432 355678999999999999999997 9999999999999999999999877653
No 283
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.88 E-value=1.5e-23 Score=227.54 Aligned_cols=160 Identities=28% Similarity=0.470 Sum_probs=127.5
Q ss_pred HHHHHhcCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 003134 670 QIKAATNNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (845)
Q Consensus 670 ~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 743 (845)
++....++|...+.||+|+||.||+|... .+..||+|.++... ....+.+.+|++++++++||||+++++++..
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 107 (313)
T 3brb_A 28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE 107 (313)
T ss_dssp TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence 33444567888999999999999999864 24589999997542 2334678999999999999999999999987
Q ss_pred CC-----EEEEEEeccCCCChhhhhhcCCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC
Q 003134 744 GN-----QLLLVYEYMKNNCLSRAIFGKDT-EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL 817 (845)
Q Consensus 744 ~~-----~~~lV~Ey~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~ 817 (845)
.+ ..++||||+++|+|.+++..... .....+++.+++.++.|+++||+|||+++ |+||||||+||+++.++
T Consensus 108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~ 184 (313)
T 3brb_A 108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDM 184 (313)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTS
T ss_pred ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCC
Confidence 54 35999999999999999854321 12346899999999999999999999987 99999999999999999
Q ss_pred cEEEEeeccceecCC
Q 003134 818 NAKISDFGLAKLYEE 832 (845)
Q Consensus 818 ~~kl~DFGla~~~~~ 832 (845)
.+||+|||+++.+..
T Consensus 185 ~~kl~Dfg~~~~~~~ 199 (313)
T 3brb_A 185 TVCVADFGLSKKIYS 199 (313)
T ss_dssp CEEECSCSCC-----
T ss_pred cEEEeecCcceeccc
Confidence 999999999987754
No 284
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.88 E-value=5.1e-23 Score=230.28 Aligned_cols=154 Identities=23% Similarity=0.361 Sum_probs=126.1
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeC------
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------ 744 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 744 (845)
....++|...+.||+|+||.||+|+.. +++.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999974 689999999865422 234699999999999999999998543
Q ss_pred --------------------------------CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHH
Q 003134 745 --------------------------------NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAY 792 (845)
Q Consensus 745 --------------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~y 792 (845)
...++||||+++ +|.+.+.... .....+++..+..++.||++||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHH
Confidence 348999999984 8887775321 122468999999999999999999
Q ss_pred HHhCCCCCeEeCCCCCCCEEec-CCCcEEEEeeccceecCCCC
Q 003134 793 LHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 793 LH~~~~~~ivHrDLKp~NILld-~~~~~kl~DFGla~~~~~~~ 834 (845)
||+.+ |+||||||+|||++ .++.+||+|||+|+.+....
T Consensus 157 LH~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~ 196 (383)
T 3eb0_A 157 IHSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE 196 (383)
T ss_dssp HHTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS
T ss_pred HHHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC
Confidence 99987 99999999999998 68999999999999875443
No 285
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.88 E-value=4.3e-23 Score=222.98 Aligned_cols=149 Identities=25% Similarity=0.387 Sum_probs=131.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey 753 (845)
.++|...+.||+|+||.||+|+.. +++.||+|+++.......+.+.+|++++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456888999999999999999986 6899999999865544556789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeeccceec
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKLY 830 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~~~ 830 (845)
+++++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 88 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 88 VSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred CCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999998542 36899999999999999999999997 9999999999999 78899999999999865
Q ss_pred C
Q 003134 831 E 831 (845)
Q Consensus 831 ~ 831 (845)
.
T Consensus 160 ~ 160 (304)
T 2jam_A 160 Q 160 (304)
T ss_dssp C
T ss_pred C
Confidence 4
No 286
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.88 E-value=9.5e-23 Score=222.81 Aligned_cols=144 Identities=24% Similarity=0.441 Sum_probs=129.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEe--CCEEEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVE--GNQLLLVY 751 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lV~ 751 (845)
++|+..+.||+|+||.||+|+.. +++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 57888999999999999999974 6899999998743 3578899999999997 9999999999997 56789999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCC-cEEEEeeccceec
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-NAKISDFGLAKLY 830 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~-~~kl~DFGla~~~ 830 (845)
||+++++|.+++. .+++.++..++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+|+.+
T Consensus 113 e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp ECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 9999999998873 3788999999999999999999997 99999999999999776 8999999999987
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 182 ~~~ 184 (330)
T 3nsz_A 182 HPG 184 (330)
T ss_dssp CTT
T ss_pred CCC
Confidence 543
No 287
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.88 E-value=2e-23 Score=224.95 Aligned_cols=157 Identities=25% Similarity=0.419 Sum_probs=120.7
Q ss_pred HHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 673 AATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 673 ~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
...++|...+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34568999999999999999999864 68899999987543 33456788999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCC---cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 751 YEYMKNNCLSRAIFGKD---TEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~---~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
|||+++++|.+++.... ......+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999985311 112246899999999999999999999987 999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+....
T Consensus 169 ~~~~~ 173 (303)
T 2vwi_A 169 AFLAT 173 (303)
T ss_dssp HHCC-
T ss_pred heecc
Confidence 87653
No 288
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.88 E-value=6.3e-24 Score=237.11 Aligned_cols=153 Identities=13% Similarity=0.133 Sum_probs=125.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcc---cccchHHHHHHH---HHHhcCCCCceeeEE-------EE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSK---SRQGNREFVNEI---GMISAQQHPNLVKLY-------GC 740 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~ 740 (845)
.++|...+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688889999999999999996 46999999999743 233457889999 556666899999998 77
Q ss_pred EEeCCE-----------------EEEEEeccCCCChhhhhhcCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 003134 741 CVEGNQ-----------------LLLVYEYMKNNCLSRAIFGKDT--EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKI 801 (845)
Q Consensus 741 ~~~~~~-----------------~~lV~Ey~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~i 801 (845)
+...+. .|+||||+ +|+|.+++..... .....+++..+..|+.||+.||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665532 78999999 6799999964311 11123446888999999999999999997 9
Q ss_pred EeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 802 VHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 802 vHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
+||||||+|||++.++.+||+|||+|+...
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~ 257 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 257 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC
Confidence 999999999999999999999999999754
No 289
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.88 E-value=3.5e-23 Score=228.18 Aligned_cols=148 Identities=22% Similarity=0.317 Sum_probs=123.1
Q ss_pred cCCCCCCcccccCcEEEEEEEEC----CCcEEEEEEcCccccc-----------chHHHHHHHHHHhcCCCCceeeEEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKSRQ-----------GNREFVNEIGMISAQQHPNLVKLYGC 740 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~ 740 (845)
++|...+.||+|+||.||+|+.. ++..+|+|++...... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999985 4778999998654221 22456788899999999999999999
Q ss_pred EEe----CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC
Q 003134 741 CVE----GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD 816 (845)
Q Consensus 741 ~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~ 816 (845)
+.. .+..++||||+ +++|.+++... ..+++.+++.++.||+.||+|||+++ |+||||||+|||++.+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccC
Confidence 988 77899999999 99999998543 26899999999999999999999997 9999999999999988
Q ss_pred C--cEEEEeeccceecCC
Q 003134 817 L--NAKISDFGLAKLYEE 832 (845)
Q Consensus 817 ~--~~kl~DFGla~~~~~ 832 (845)
+ .+||+|||+|+.+..
T Consensus 188 ~~~~~kL~Dfg~a~~~~~ 205 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCP 205 (345)
T ss_dssp STTSEEECCCTTCEESSG
T ss_pred CCCcEEEEeCCCceeccc
Confidence 7 999999999998754
No 290
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=4.5e-23 Score=221.81 Aligned_cols=149 Identities=30% Similarity=0.452 Sum_probs=128.6
Q ss_pred CCCCCCcccccCcEEEEEEEECC----CcEEEEEEcCcccc-cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE-EEE
Q 003134 677 NFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL-LLV 750 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lV 750 (845)
.|...++||+|+||.||+|++.+ +..||+|.+..... ...+.+.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34556899999999999998632 33799999876432 3457889999999999999999999999876655 999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+.+|+|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+|+.+
T Consensus 102 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ----RNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 99999999999996532 36899999999999999999999997 999999999999999999999999999866
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 175 ~~ 176 (298)
T 3pls_A 175 LD 176 (298)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 291
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.88 E-value=4.8e-23 Score=244.83 Aligned_cols=144 Identities=30% Similarity=0.484 Sum_probs=126.1
Q ss_pred CcccccCcEEEEEEEEC---CCcEEEEEEcCcccc--cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccCC
Q 003134 682 NKVGEGGFGSVYKGILS---DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKN 756 (845)
Q Consensus 682 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~~ 756 (845)
+.||+|+||.||+|.+. .++.||||+++.... ...+++.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 467899999976532 335789999999999999999999999964 558899999999
Q ss_pred CChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCCCC
Q 003134 757 NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEEDK 834 (845)
Q Consensus 757 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~~~ 834 (845)
|+|.+++... ..+++.++..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+..+.
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~ 523 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence 9999999543 36899999999999999999999997 9999999999999999999999999999875443
No 292
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.88 E-value=7.4e-23 Score=227.28 Aligned_cols=149 Identities=26% Similarity=0.423 Sum_probs=131.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 747 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457889999999999999999975 58899999997543 23346789999999999999999999999765 368
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++ +|.+++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 106 ~iv~e~~~~-~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEcccCc-CHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcce
Confidence 999999985 899988532 5899999999999999999999997 999999999999999999999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 176 ~~~~~~ 181 (364)
T 3qyz_A 176 RVADPD 181 (364)
T ss_dssp EECCGG
T ss_pred EecCCC
Confidence 987543
No 293
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.88 E-value=2.4e-23 Score=227.94 Aligned_cols=159 Identities=30% Similarity=0.439 Sum_probs=136.0
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEECC------CcEEEEEEcCcccc-cchHHHHHHHHHHhcC-CCCceeeEEEEEEe
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILSD------GTVIAVKQLSSKSR-QGNREFVNEIGMISAQ-QHPNLVKLYGCCVE 743 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~ 743 (845)
....++|...+.||+|+||.||+|.... ...||+|.++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445788899999999999999999743 24799999976532 3456789999999999 89999999999999
Q ss_pred CCEEEEEEeccCCCChhhhhhcCCcc---------cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec
Q 003134 744 GNQLLLVYEYMKNNCLSRAIFGKDTE---------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD 814 (845)
Q Consensus 744 ~~~~~lV~Ey~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld 814 (845)
.+..++||||+++|+|.+++...... ....+++.++..++.|++.||+|||+++ |+||||||+|||++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEEC
Confidence 99999999999999999998643210 1235799999999999999999999987 99999999999999
Q ss_pred CCCcEEEEeeccceecCCC
Q 003134 815 KDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 815 ~~~~~kl~DFGla~~~~~~ 833 (845)
.++.+||+|||+++.....
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~ 217 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMND 217 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGC
T ss_pred CCCeEEECccccccccccc
Confidence 9999999999999977543
No 294
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.88 E-value=4.2e-23 Score=221.12 Aligned_cols=154 Identities=25% Similarity=0.407 Sum_probs=121.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-c-chHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-Q-GNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|+++.... . ..+.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467888999999999999999974 689999999976522 2 2233445555688899999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
||+++ +|.+++.... .....+++.++..++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+|+..
T Consensus 86 e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCSE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhcc-chHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99985 8887775321 1224689999999999999999999997 6 999999999999999999999999999877
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 161 ~~~ 163 (290)
T 3fme_A 161 VDD 163 (290)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 295
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.88 E-value=5.4e-23 Score=224.96 Aligned_cols=150 Identities=31% Similarity=0.612 Sum_probs=126.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCc----EEEEEEcCcc-cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGT----VIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
.++|+..+.||+|+||.||+|++. +++ .||+|.+... .....+++.+|++++++++||||+++++++...+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357888999999999999999974 344 3577777544 3445678999999999999999999999998765 78
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+|+||+++|+|.+++.... ..+++.+++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+
T Consensus 93 ~v~~~~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK----DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 9999999999999996542 36899999999999999999999997 9999999999999999999999999999
Q ss_pred ecCC
Q 003134 829 LYEE 832 (845)
Q Consensus 829 ~~~~ 832 (845)
.+..
T Consensus 166 ~~~~ 169 (327)
T 3lzb_A 166 LLGA 169 (327)
T ss_dssp ----
T ss_pred EccC
Confidence 8754
No 296
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.88 E-value=7.2e-23 Score=222.26 Aligned_cols=148 Identities=29% Similarity=0.485 Sum_probs=124.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEECC-CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEE-----------
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCV----------- 742 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~----------- 742 (845)
.++|...+.||+|+||.||+|.... ++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3578889999999999999999864 8999999997665556678999999999999999999999873
Q ss_pred ---eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCc
Q 003134 743 ---EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLN 818 (845)
Q Consensus 743 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~ 818 (845)
..+..++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+++ |+||||||+||+++ +++.
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCe
Confidence 3468899999998 599999853 25889999999999999999999997 99999999999997 5679
Q ss_pred EEEEeeccceecCC
Q 003134 819 AKISDFGLAKLYEE 832 (845)
Q Consensus 819 ~kl~DFGla~~~~~ 832 (845)
+||+|||+++....
T Consensus 160 ~kl~Dfg~~~~~~~ 173 (320)
T 2i6l_A 160 LKIGDFGLARIMDP 173 (320)
T ss_dssp EEECCCTTCBCC--
T ss_pred EEEccCccccccCC
Confidence 99999999997753
No 297
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.88 E-value=4.6e-23 Score=223.36 Aligned_cols=150 Identities=33% Similarity=0.552 Sum_probs=124.9
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccC
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMK 755 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~ 755 (845)
++|+..+.||+|+||.||+|++. ++.||+|++... ...+.|.+|++++++++||||+++++++. +..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 46778899999999999999985 788999999653 34578999999999999999999999876 44799999999
Q ss_pred CCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc-EEEEeeccceecCC
Q 003134 756 NNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN-AKISDFGLAKLYEE 832 (845)
Q Consensus 756 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~-~kl~DFGla~~~~~ 832 (845)
+|+|.+++..... ...+++.+++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++....
T Consensus 83 ~~~L~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 83 GGSLYNVLHGAEP--LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp TCBHHHHHHCSSS--EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred CCCHHHHHhccCC--CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 9999999976432 235789999999999999999999943335999999999999998886 79999999987643
No 298
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.88 E-value=4.9e-23 Score=226.29 Aligned_cols=153 Identities=24% Similarity=0.438 Sum_probs=129.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cchHHHHHHHHH-HhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QGNREFVNEIGM-ISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|+.. +++.||||+++.... ....++..|..+ ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 457888899999999999999974 689999999976532 234455666665 78889999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
||+++ +|.+++.... .....+++..+..++.||+.||+|||++ + |+||||||+|||++.++.+||+|||+++.+
T Consensus 130 e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp CCCSE-EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHhhC-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99986 8988885421 1234789999999999999999999986 6 999999999999999999999999999876
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 205 ~~ 206 (340)
T 3an0_A 205 VD 206 (340)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 299
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.88 E-value=4.8e-23 Score=219.44 Aligned_cols=158 Identities=28% Similarity=0.479 Sum_probs=131.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe--CCEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLL 749 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 749 (845)
.++|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999986 58999999997542 2335678999999999999999999998864 578999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS--RIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
||||+++|+|.+++..... ....+++.++..++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||++
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999999965321 2235899999999999999999999975 123999999999999999999999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 164 ~~~~~~ 169 (279)
T 2w5a_A 164 RILNHD 169 (279)
T ss_dssp HHC---
T ss_pred eeeccc
Confidence 876543
No 300
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.88 E-value=1.7e-22 Score=217.88 Aligned_cols=146 Identities=25% Similarity=0.345 Sum_probs=127.1
Q ss_pred cCCCCC-CcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHH-hcCCCCceeeEEEEEEe----CCEEE
Q 003134 676 NNFDPA-NKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMI-SAQQHPNLVKLYGCCVE----GNQLL 748 (845)
Q Consensus 676 ~~y~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~ 748 (845)
++|... +.||+|+||.||+|... +++.||+|+++. ...+.+|++++ +..+||||+++++++.. .+..+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456665 77999999999999975 589999999854 35677888887 56699999999999987 67789
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEEeec
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFG 825 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~DFG 825 (845)
+||||+++|+|.+++..... ..+++.++..++.|++.||+|||+++ |+||||||+||+++. ++.+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGD---QAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 99999999999999975422 36899999999999999999999997 999999999999998 7899999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 166 ~a~~~~~ 172 (299)
T 3m2w_A 166 FAKETTG 172 (299)
T ss_dssp TCEECTT
T ss_pred ccccccc
Confidence 9988754
No 301
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.88 E-value=4.3e-23 Score=219.95 Aligned_cols=149 Identities=32% Similarity=0.510 Sum_probs=125.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeC-CEEEEEEec
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-NQLLLVYEY 753 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lV~Ey 753 (845)
.++|+..+.||+|+||.||+|... ++.||+|+++.. ...+.+.+|++++++++||||+++++++... +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 357888999999999999999884 889999999754 3457899999999999999999999997655 478999999
Q ss_pred cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+++|+|.+++.... ...+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 97 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred CCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999996432 224889999999999999999999987 99999999999999999999999999987643
No 302
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.88 E-value=1.2e-22 Score=226.29 Aligned_cols=147 Identities=25% Similarity=0.382 Sum_probs=124.6
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC------
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------ 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 745 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 357889999999999999999975 58999999986532 233467889999999999999999999997654
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
..++||||+++ +|.+.+.. .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999985 68877742 4889999999999999999999997 9999999999999999999999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 173 ~a~~~~~ 179 (371)
T 2xrw_A 173 LARTAGT 179 (371)
T ss_dssp C------
T ss_pred ccccccc
Confidence 9987754
No 303
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.87 E-value=4.8e-23 Score=229.03 Aligned_cols=148 Identities=30% Similarity=0.451 Sum_probs=115.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC------C
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG------N 745 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 745 (845)
.++|+..+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 367889999999999999999975 58999999996542 23456788999999999999999999998754 5
Q ss_pred EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 746 QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 746 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
..|+||||+ +++|.+++.. ..+++.++..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecc
Confidence 689999999 6799888853 26899999999999999999999987 9999999999999999999999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 178 ~a~~~~~ 184 (367)
T 2fst_X 178 LARHTAD 184 (367)
T ss_dssp -------
T ss_pred ccccccc
Confidence 9987653
No 304
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.87 E-value=6.1e-23 Score=224.59 Aligned_cols=154 Identities=28% Similarity=0.396 Sum_probs=132.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEe--------C
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVE--------G 744 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--------~ 744 (845)
..+|+..+.||+|+||.||+|++. +++.||+|++........+.+.+|+.++.++. ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346888999999999999999975 58999999986665555678899999999996 9999999999953 3
Q ss_pred CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEee
Q 003134 745 NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDF 824 (845)
Q Consensus 745 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DF 824 (845)
...++||||+. |+|.+++.... ....+++.+++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 45899999996 68998885421 1236899999999999999999999874 34999999999999999999999999
Q ss_pred ccceecCC
Q 003134 825 GLAKLYEE 832 (845)
Q Consensus 825 Gla~~~~~ 832 (845)
|+++....
T Consensus 183 g~~~~~~~ 190 (337)
T 3ll6_A 183 GSATTISH 190 (337)
T ss_dssp TTCBCCSS
T ss_pred ccceeccc
Confidence 99988754
No 305
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.87 E-value=1e-22 Score=244.89 Aligned_cols=148 Identities=21% Similarity=0.376 Sum_probs=128.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC--CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCE-----
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS--DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ----- 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 746 (845)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367999999999999999999985 58999999986542 2345678899999999999999999999987654
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||+++ |+||||||+|||++.+ .+||+|||+
T Consensus 159 ~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEeccc
Confidence 7999999999999887632 5899999999999999999999997 9999999999999876 899999999
Q ss_pred ceecCCC
Q 003134 827 AKLYEED 833 (845)
Q Consensus 827 a~~~~~~ 833 (845)
++.....
T Consensus 228 a~~~~~~ 234 (681)
T 2pzi_A 228 VSRINSF 234 (681)
T ss_dssp CEETTCC
T ss_pred chhcccC
Confidence 9987643
No 306
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.87 E-value=3.3e-23 Score=228.98 Aligned_cols=146 Identities=17% Similarity=0.266 Sum_probs=127.6
Q ss_pred cCCCCCCcccccCcEEEEEEEECC---------CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceee----------
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSD---------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVK---------- 736 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~---------- 736 (845)
++|...+.||+|+||.||+|+... ++.||+|.+... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999999763 789999998653 46789999999999999887
Q ss_pred -----EEEEEEe-CCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCC
Q 003134 737 -----LYGCCVE-GNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSN 810 (845)
Q Consensus 737 -----l~~~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~N 810 (845)
+++++.. ++..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+++ |+||||||+|
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP---KHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 6788876 68899999999 999999996542 246999999999999999999999997 9999999999
Q ss_pred EEecCCC--cEEEEeeccceecCCC
Q 003134 811 VLLDKDL--NAKISDFGLAKLYEED 833 (845)
Q Consensus 811 ILld~~~--~~kl~DFGla~~~~~~ 833 (845)
||++.++ .+||+|||+|+.+...
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~ 214 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPS 214 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGG
T ss_pred EEEcCCCCceEEEecCcceeeccCC
Confidence 9999998 8999999999887543
No 307
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.87 E-value=1.6e-22 Score=223.21 Aligned_cols=148 Identities=25% Similarity=0.454 Sum_probs=130.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeC-----CEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEG-----NQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 747 (845)
.++|...+.||+|+||.||+|+.. +++.||||++.... .....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999986 58999999996542 23346788999999999999999999998754 678
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||++ |+|.+++.. ..+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 90 ~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp EEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccc
Confidence 99999998 589988854 25899999999999999999999997 999999999999999999999999999
Q ss_pred eecCC
Q 003134 828 KLYEE 832 (845)
Q Consensus 828 ~~~~~ 832 (845)
+.+..
T Consensus 160 ~~~~~ 164 (353)
T 2b9h_A 160 RIIDE 164 (353)
T ss_dssp EECC-
T ss_pred ccccc
Confidence 98754
No 308
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=7.8e-22 Score=213.85 Aligned_cols=191 Identities=18% Similarity=0.288 Sum_probs=122.4
Q ss_pred ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEee
Q 003134 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (845)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 219 (845)
+|++|++++|+++.. | .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. ..+.++++|++|+|+
T Consensus 42 ~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC
Confidence 555555555555532 2 35555555555555555553322 55555555555555555532 235555555555555
Q ss_pred cCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCc
Q 003134 220 DNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP 299 (845)
Q Consensus 220 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p 299 (845)
+|++++. +. +..+++|++|+|++|++++..+ +..++ +|+.|+|++|++++..+
T Consensus 116 ~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~-----------------------~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 116 STQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLT-----------------------NLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp TSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCT-----------------------TCCEEECCSSCCCCCGG
T ss_pred CCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCC-----------------------CccEEEccCCcCCCChh
Confidence 5555532 22 5555555555555555554332 44444 55666777777776444
Q ss_pred ccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCC
Q 003134 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWE 367 (845)
Q Consensus 300 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~ 367 (845)
+..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..|-.-..+|+.|++++|.+++.
T Consensus 169 --l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 169 --LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp --GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEECC
T ss_pred --hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeecC
Confidence 8899999999999999996554 899999999999999999766533356899999999988753
No 309
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.87 E-value=1.2e-22 Score=228.20 Aligned_cols=149 Identities=28% Similarity=0.417 Sum_probs=122.8
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCC------EEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGN------QLLL 749 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~l 749 (845)
.+|...+.||+|+||.||+|+...+..||+|++...... ..+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468889999999999999999987777999988543222 236999999999999999999997543 3889
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCcEEEEeeccce
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAKISDFGLAK 828 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~~kl~DFGla~ 828 (845)
||||++++.+....+.. .....+++..+..++.||++||+|||+++ |+||||||+|||++ .++.+||+|||+|+
T Consensus 116 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYA--KLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEECCSEEHHHHHHHHH--HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeeccCccHHHHHHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999876444333211 12346899999999999999999999997 99999999999999 79999999999999
Q ss_pred ecCCC
Q 003134 829 LYEED 833 (845)
Q Consensus 829 ~~~~~ 833 (845)
.+...
T Consensus 191 ~~~~~ 195 (394)
T 4e7w_A 191 ILIAG 195 (394)
T ss_dssp ECCTT
T ss_pred cccCC
Confidence 87543
No 310
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.87 E-value=9.9e-23 Score=218.30 Aligned_cols=151 Identities=26% Similarity=0.478 Sum_probs=123.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC--CCc--EEEEEEcCccc---ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS--DGT--VIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 748 (845)
++|+..+.||+|+||.||+|++. +++ .||+|+++... ....+++.+|++++++++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999863 233 68999987642 234568899999999999999999999998765 88
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccce
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAK 828 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~ 828 (845)
+||||+++|+|.+++... ...+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 97 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccc
Confidence 999999999999999643 235899999999999999999999997 9999999999999999999999999999
Q ss_pred ecCCCC
Q 003134 829 LYEEDK 834 (845)
Q Consensus 829 ~~~~~~ 834 (845)
......
T Consensus 170 ~~~~~~ 175 (291)
T 1u46_A 170 ALPQND 175 (291)
T ss_dssp ECCC-C
T ss_pred cccccc
Confidence 886543
No 311
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.1e-22 Score=220.07 Aligned_cols=237 Identities=14% Similarity=0.100 Sum_probs=141.8
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcc-cccccccccce-eEeec
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFP-KVLTNITTLKN-LSIEG 172 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~Ls~ 172 (845)
+++.++++|+ .+|..+ .++|++|+|++|+|+.+.+.+|..+ +|++|+|++|++.+.+| ..|.++++|++ +.++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 4677888888 567666 3578888888888876666666666 66666666666655443 34566665543 44455
Q ss_pred ccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeec-CcCcccCchhhcCCc-ccceEEecCCcCCCC
Q 003134 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD-NNFSGKIPEFIGKWK-KIQKLHIQGSSLEGP 250 (845)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~ 250 (845)
|+|+...|..|..+++|++|++++|+|++..+..+....++..|++.+ |+++...+..|..+. .++.|+|++|+|+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-- 167 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-- 167 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC--
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc--
Confidence 666655555666666666666666666654444455555555566543 445544444444443 3555555555555
Q ss_pred cchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccC-CcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcC
Q 003134 251 IPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTK-CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKL 329 (845)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 329 (845)
.++...+...+|+.|++++ |.++.+.+..|.++++|+.|||++|+|+...+..|.
T Consensus 168 ----------------------~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~-- 223 (350)
T 4ay9_X 168 ----------------------EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE-- 223 (350)
T ss_dssp ----------------------EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT--
T ss_pred ----------------------CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc--
Confidence 3333333334566677764 566655556788888888888888888855444444
Q ss_pred CCcCEEEccCCcccCCCCh-hhhcCCceEEeecC
Q 003134 330 AKTNFMYLTGNKLTGPVPK-YIFNSNKNVDISLN 362 (845)
Q Consensus 330 ~~L~~L~L~~N~l~g~ip~-~~~~~l~~L~ls~N 362 (845)
+|+.|.+.++.--..+|. .-+.+|+.++++++
T Consensus 224 -~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 224 -NLKKLRARSTYNLKKLPTLEKLVALMEASLTYP 256 (350)
T ss_dssp -TCCEEECTTCTTCCCCCCTTTCCSCCEEECSCH
T ss_pred -cchHhhhccCCCcCcCCCchhCcChhhCcCCCC
Confidence 445555433332335553 22457788887654
No 312
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.4e-22 Score=226.57 Aligned_cols=149 Identities=28% Similarity=0.484 Sum_probs=116.6
Q ss_pred CCC-CCcccccCcEEEEEEEEC---CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEe--CCEEEEEE
Q 003134 678 FDP-ANKVGEGGFGSVYKGILS---DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE--GNQLLLVY 751 (845)
Q Consensus 678 y~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lV~ 751 (845)
|+. .++||+|+||.||+|+.. +++.||+|++... ...+.+.+|++++++++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 458999999999999975 4789999999754 234578899999999999999999999965 67899999
Q ss_pred eccCCCChhhhhhcCCc----ccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe----cCCCcEEEEe
Q 003134 752 EYMKNNCLSRAIFGKDT----EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL----DKDLNAKISD 823 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl----d~~~~~kl~D 823 (845)
||+++ +|.+++..... .....+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99975 78777743211 11235899999999999999999999997 9999999999999 7789999999
Q ss_pred eccceecCC
Q 003134 824 FGLAKLYEE 832 (845)
Q Consensus 824 FGla~~~~~ 832 (845)
||+|+.+..
T Consensus 176 fg~a~~~~~ 184 (405)
T 3rgf_A 176 MGFARLFNS 184 (405)
T ss_dssp TTCCC----
T ss_pred CCCceecCC
Confidence 999998754
No 313
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.87 E-value=1.2e-22 Score=242.41 Aligned_cols=154 Identities=27% Similarity=0.439 Sum_probs=132.3
Q ss_pred HHhcCCCCCCcccccCcEEEEEEEECC----CcEEEEEEcCccc-ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 673 AATNNFDPANKVGEGGFGSVYKGILSD----GTVIAVKQLSSKS-RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 673 ~~~~~y~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
...++|+..+.||+|+||.||+|.+.. +..||+|.++... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 345678888999999999999999742 5679999987643 233468999999999999999999999984 5668
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccc
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLA 827 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla 827 (845)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK----FSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT----TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred EEEEEcCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 99999999999999996432 35899999999999999999999987 999999999999999999999999999
Q ss_pred eecCCCC
Q 003134 828 KLYEEDK 834 (845)
Q Consensus 828 ~~~~~~~ 834 (845)
+......
T Consensus 539 ~~~~~~~ 545 (656)
T 2j0j_A 539 RYMEDST 545 (656)
T ss_dssp CSCCC--
T ss_pred eecCCCc
Confidence 9875443
No 314
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.3e-22 Score=220.82 Aligned_cols=225 Identities=17% Similarity=0.116 Sum_probs=144.1
Q ss_pred CEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCc-ccccCCCccE-EEeec
Q 003134 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPP-DIRKLINLQK-LILSS 196 (845)
Q Consensus 119 ~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L~Ls~ 196 (845)
++++.++|+++.++ ..+ ..++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+|. .|.++++|++ +++++
T Consensus 12 ~~v~C~~~~Lt~iP-~~l-~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVTEIP-SDL-PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCCSCC-TTC-CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCCccC-cCc-CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 45677777777443 222 11566666666666655555566666666666666666544443 4555655543 44455
Q ss_pred CcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecC-CcCCCCcchhhhcCCCCCEEEcCCCCCCCCC
Q 003134 197 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG-SSLEGPIPASISALTSLTDLRISDLKGSESA 275 (845)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~ 275 (845)
|+|+...|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+..|..+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~---------------- 153 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS---------------- 153 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB----------------
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc----------------
Confidence 666655555566666666666666666655444555555555555543 334432222222221
Q ss_pred CcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCC-CCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCC
Q 003134 276 FPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSF-NNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSN 354 (845)
Q Consensus 276 ~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l 354 (845)
..++.|+|++|+|+.+.+..| ...+|+.|++++ |+++...+..|.++++|++|+|++|+|+ .+|...+..+
T Consensus 154 ------~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L 225 (350)
T 4ay9_X 154 ------FESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENL 225 (350)
T ss_dssp ------SSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTC
T ss_pred ------hhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccc
Confidence 157888999999996655555 457899999985 6777555578999999999999999999 6787778889
Q ss_pred ceEEeecCCCcCCCC
Q 003134 355 KNVDISLNNFTWESS 369 (845)
Q Consensus 355 ~~L~ls~N~l~~~~p 369 (845)
+.|.+.+++-...+|
T Consensus 226 ~~L~~l~~~~l~~lP 240 (350)
T 4ay9_X 226 KKLRARSTYNLKKLP 240 (350)
T ss_dssp CEEECTTCTTCCCCC
T ss_pred hHhhhccCCCcCcCC
Confidence 999887776555555
No 315
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=2.9e-22 Score=233.70 Aligned_cols=221 Identities=19% Similarity=0.195 Sum_probs=138.3
Q ss_pred CCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeec
Q 003134 117 YLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSS 196 (845)
Q Consensus 117 ~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 196 (845)
+|+.|+|++|+|++ +|..+. .+|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 78999999999998 444332 47888999999888 455 447888889999988886 666 655 888888888
Q ss_pred CcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCC
Q 003134 197 NSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAF 276 (845)
Q Consensus 197 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~ 276 (845)
|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|.++..+.
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh
Confidence 88886 665 57888888888888886 555 56788888888888886 555 54 666666666555553332
Q ss_pred cccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhc----
Q 003134 277 PKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFN---- 352 (845)
Q Consensus 277 ~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~---- 352 (845)
+.. +| +.....|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..
T Consensus 198 --~~~-~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~ 256 (571)
T 3cvr_A 198 --VPV-RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQ 256 (571)
T ss_dssp --CC--------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHHS
T ss_pred --HHH-hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhcC
Confidence 211 23 000111266666666666 45555555666666666666666655555422
Q ss_pred -----CCceEEeecCCCcCCCCCCCCCCCCCceee
Q 003134 353 -----SNKNVDISLNNFTWESSDPIECPRGSVNLV 382 (845)
Q Consensus 353 -----~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l 382 (845)
....++++.|++.... .| .|+|...|+.
T Consensus 257 ~~~~~~~~~~~l~~~~~~~~~-~p-~~~~~~~Wl~ 289 (571)
T 3cvr_A 257 PDYHGPRIYFSMSDGQQNTLH-RP-LADAVTAWFP 289 (571)
T ss_dssp CC---CEEECCC-----------C-CSHHHHTTCC
T ss_pred ccccCCeeEEeeccccccccc-cc-chhhHHHHhh
Confidence 1112344555444332 24 6887666554
No 316
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.87 E-value=1.8e-22 Score=220.09 Aligned_cols=152 Identities=28% Similarity=0.532 Sum_probs=128.5
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC--CCcEEEEEEcCcccc--cchHHHHHHHHHHhcC---CCCceeeEEEEEE----
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS--DGTVIAVKQLSSKSR--QGNREFVNEIGMISAQ---QHPNLVKLYGCCV---- 742 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~---- 742 (845)
+.++|+..+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|+++++++ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999983 588999999865432 2234566777777665 8999999999987
Q ss_pred -eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEE
Q 003134 743 -EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 743 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl 821 (845)
.....++||||++ |+|.+++..... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE---PGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT---TCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEE
Confidence 4567899999998 699999865422 25899999999999999999999997 999999999999999999999
Q ss_pred EeeccceecCC
Q 003134 822 SDFGLAKLYEE 832 (845)
Q Consensus 822 ~DFGla~~~~~ 832 (845)
+|||+++....
T Consensus 162 ~Dfg~~~~~~~ 172 (326)
T 1blx_A 162 ADFGLARIYSF 172 (326)
T ss_dssp CSCCSCCCCCG
T ss_pred ecCcccccccC
Confidence 99999987653
No 317
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.87 E-value=3.6e-22 Score=214.37 Aligned_cols=150 Identities=26% Similarity=0.398 Sum_probs=125.4
Q ss_pred HhcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEE-EeCCEEEEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLVY 751 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~ 751 (845)
..++|+..+.||+|+||.||+|+. .+++.||+|++..... .+++.+|++++++++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999997 4689999998754422 24578899999999988877766655 6778899999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeeccce
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAK 828 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~ 828 (845)
||+ +++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+|+
T Consensus 85 e~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp ECC-CCBHHHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred Ecc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 999 999999986432 36899999999999999999999997 9999999999999 788999999999999
Q ss_pred ecCCC
Q 003134 829 LYEED 833 (845)
Q Consensus 829 ~~~~~ 833 (845)
.....
T Consensus 157 ~~~~~ 161 (296)
T 4hgt_A 157 KYRDA 161 (296)
T ss_dssp ECBCT
T ss_pred eccCc
Confidence 87654
No 318
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.87 E-value=9.7e-23 Score=222.72 Aligned_cols=154 Identities=30% Similarity=0.414 Sum_probs=130.0
Q ss_pred hcCCCCCCcccccCcEEEEEEEE------CCCcEEEEEEcCcc-cccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL------SDGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 747 (845)
.++|...+.||+|+||.||+|++ .+++.||||.+... ......++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 24778999999754 234456889999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcc--cccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEE
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTE--YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKIS 822 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~ 822 (845)
++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+++ |+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999754321 1235899999999999999999999997 999999999999984 4469999
Q ss_pred eeccceecC
Q 003134 823 DFGLAKLYE 831 (845)
Q Consensus 823 DFGla~~~~ 831 (845)
|||+++...
T Consensus 186 Dfg~~~~~~ 194 (327)
T 2yfx_A 186 DFGMARDIY 194 (327)
T ss_dssp CCHHHHHHH
T ss_pred ccccccccc
Confidence 999998654
No 319
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.87 E-value=4.4e-22 Score=213.18 Aligned_cols=152 Identities=26% Similarity=0.473 Sum_probs=134.4
Q ss_pred HhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 674 ATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 674 ~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999986 68999999986543 34467899999999999999999999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC---CcEEEEeeccc
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD---LNAKISDFGLA 827 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~---~~~kl~DFGla 827 (845)
|||+++++|.+.+... ..+++.++..++.|++.||+|||+++ |+||||||+||+++.+ +.+||+|||++
T Consensus 100 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999888542 36899999999999999999999997 9999999999999754 47999999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.....
T Consensus 172 ~~~~~~ 177 (287)
T 2wei_A 172 TCFQQN 177 (287)
T ss_dssp GTBCCC
T ss_pred eeecCC
Confidence 877543
No 320
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.87 E-value=2.3e-22 Score=219.69 Aligned_cols=153 Identities=25% Similarity=0.450 Sum_probs=126.7
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc-ccchHHHHHHHH-HHhcCCCCceeeEEEEEEeCCEEEEEEe
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS-RQGNREFVNEIG-MISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lV~E 752 (845)
++|...+.||+|+||.||+|... +++.||||+++... .....++..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57888999999999999999985 68999999997643 223345566665 7778899999999999999999999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
|+++ +|.+++..........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++.+.
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9986 787777532111234689999999999999999999997 6 9999999999999999999999999998775
Q ss_pred C
Q 003134 832 E 832 (845)
Q Consensus 832 ~ 832 (845)
.
T Consensus 178 ~ 178 (327)
T 3aln_A 178 D 178 (327)
T ss_dssp -
T ss_pred c
Confidence 4
No 321
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.87 E-value=3.8e-22 Score=226.54 Aligned_cols=150 Identities=22% Similarity=0.348 Sum_probs=129.6
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcC------CCCceeeEEEEEEeCCEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQ------QHPNLVKLYGCCVEGNQL 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 747 (845)
..+|+..+.||+|+||.||+|... +++.||||+++.. ....+++.+|++++..+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457889999999999999999976 4899999999754 23345677888888776 677999999999999999
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc--EEEEeec
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN--AKISDFG 825 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~--~kl~DFG 825 (845)
++||||+. ++|.+++..... ..+++..+..|+.||+.||+|||+++ |+||||||+|||++.++. +||+|||
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF---QGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEeccC-CCHHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecc
Confidence 99999996 589998865432 25899999999999999999999997 999999999999999887 9999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 248 ~a~~~~~ 254 (429)
T 3kvw_A 248 SSCYEHQ 254 (429)
T ss_dssp TCEETTC
T ss_pred cceecCC
Confidence 9987643
No 322
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.87 E-value=1.9e-22 Score=228.39 Aligned_cols=149 Identities=30% Similarity=0.429 Sum_probs=122.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeC----C--EEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEG----N--QLL 748 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~--~~~ 748 (845)
.+|+..+.||+|+||.||+|++. +++.||||++.... +.+.+|++++++++||||+++++++... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35778899999999999999986 58999999986542 2234699999999999999999998642 2 367
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC-CcEEEEeeccc
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-LNAKISDFGLA 827 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~-~~~kl~DFGla 827 (845)
+||||+++ +|.+.+.... .....+++..+..++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+|
T Consensus 130 lv~e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eehhcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhh
Confidence 99999986 5666553211 12346899999999999999999999987 9999999999999965 57899999999
Q ss_pred eecCCC
Q 003134 828 KLYEED 833 (845)
Q Consensus 828 ~~~~~~ 833 (845)
+.+...
T Consensus 205 ~~~~~~ 210 (420)
T 1j1b_A 205 KQLVRG 210 (420)
T ss_dssp EECCTT
T ss_pred hhcccC
Confidence 987543
No 323
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.87 E-value=5.8e-22 Score=212.88 Aligned_cols=150 Identities=26% Similarity=0.395 Sum_probs=128.9
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-CCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEE-EeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-SDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCC-VEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lV~E 752 (845)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... ..+++.+|++++++++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788999999999999999997 469999999986543 235688999999999988866666555 56788999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeecccee
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 829 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~~ 829 (845)
|+ +++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+|||+ ++++.+||+|||+++.
T Consensus 86 ~~-~~~L~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCS----RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ec-CCCHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 99 899999996432 36899999999999999999999997 9999999999999 5889999999999998
Q ss_pred cCCCC
Q 003134 830 YEEDK 834 (845)
Q Consensus 830 ~~~~~ 834 (845)
.....
T Consensus 158 ~~~~~ 162 (296)
T 3uzp_A 158 YRDAR 162 (296)
T ss_dssp CBCTT
T ss_pred ccccc
Confidence 76543
No 324
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.86 E-value=1.4e-22 Score=219.86 Aligned_cols=154 Identities=25% Similarity=0.366 Sum_probs=125.0
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc------chHHHHHHHHHHhcC----CCCceeeEEEE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQ----QHPNLVKLYGC 740 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~~~ 740 (845)
....++|...+.||+|+||.||+|+.. +++.||+|+++..... ....+.+|++++.++ +|+||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 444678999999999999999999874 5889999999764321 223456788888888 89999999999
Q ss_pred EEeCCEEEEEEec-cCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCc
Q 003134 741 CVEGNQLLLVYEY-MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLN 818 (845)
Q Consensus 741 ~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~ 818 (845)
+...+..++|||| +.+++|.+++... ..+++.++..++.|+++||+|||+++ |+||||||+||+++ .++.
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCe
Confidence 9999999999999 7899999999542 36899999999999999999999997 99999999999999 8899
Q ss_pred EEEEeeccceecCCC
Q 003134 819 AKISDFGLAKLYEED 833 (845)
Q Consensus 819 ~kl~DFGla~~~~~~ 833 (845)
+||+|||+++.....
T Consensus 179 ~kl~dfg~~~~~~~~ 193 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE 193 (312)
T ss_dssp EEECCCSSCEECCSS
T ss_pred EEEEEcchhhhcccC
Confidence 999999999987643
No 325
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.86 E-value=1e-21 Score=225.50 Aligned_cols=150 Identities=27% Similarity=0.394 Sum_probs=129.2
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCC-CceeeEEEEEEeCCEEEEEEe
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH-PNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lV~E 752 (845)
.++|++.++||+|+||.||+|++. +++.||||++..... ..++..|++++..++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 367899999999999999999974 689999998765432 3457889999999987 566667777788899999999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe---cCCCcEEEEeecccee
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL---DKDLNAKISDFGLAKL 829 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl---d~~~~~kl~DFGla~~ 829 (845)
|+ +++|.+++.... ..+++.+++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+|+.
T Consensus 84 ~~-g~sL~~ll~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCS----RKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp CC-CCBHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CC-CCCHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 99 999999996432 36899999999999999999999997 9999999999999 6889999999999998
Q ss_pred cCCCC
Q 003134 830 YEEDK 834 (845)
Q Consensus 830 ~~~~~ 834 (845)
+....
T Consensus 156 ~~~~~ 160 (483)
T 3sv0_A 156 YRDTS 160 (483)
T ss_dssp CBCTT
T ss_pred ccCCc
Confidence 86543
No 326
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.86 E-value=2.3e-22 Score=223.83 Aligned_cols=148 Identities=11% Similarity=0.058 Sum_probs=112.8
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc---cchHHHHHHH---HHHhcCCCCceeeEE-------EEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR---QGNREFVNEI---GMISAQQHPNLVKLY-------GCC 741 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~ 741 (845)
.+|...+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+ ++|+. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 45788899999999999999975 689999999977532 2345677784 45555 799988755 555
Q ss_pred EeC-----------------CEEEEEEeccCCCChhhhhhcCCcccccCCCHHHH------HHHHHHHHHHHHHHHhCCC
Q 003134 742 VEG-----------------NQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTR------KKICIGIARGLAYLHEDSR 798 (845)
Q Consensus 742 ~~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~ia~aL~yLH~~~~ 798 (845)
... ...|+||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~- 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQSKG- 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC-
Confidence 433 34899999999 89999996532 24455666 788899999999999997
Q ss_pred CCeEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 799 IKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 799 ~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
|+||||||+|||++.++.+||+|||+|+....
T Consensus 215 --ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~ 246 (371)
T 3q60_A 215 --LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT 246 (371)
T ss_dssp --EEETTCSGGGEEECTTSCEEECCGGGEEETTC
T ss_pred --CccCcCCHHHEEECCCCCEEEEecceeeecCC
Confidence 99999999999999999999999999997753
No 327
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.86 E-value=3.2e-22 Score=224.19 Aligned_cols=135 Identities=26% Similarity=0.412 Sum_probs=113.4
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC--------CCceeeEEEEEE---
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ--------HPNLVKLYGCCV--- 742 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~--- 742 (845)
.++|++.++||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367889999999999999999975 5889999999754 334567889999999885 788999999988
Q ss_pred -eCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCC
Q 003134 743 -EGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDL 817 (845)
Q Consensus 743 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~ 817 (845)
.....++||||+ +++|.+.+.... ...+++.+++.|+.||+.||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~ 184 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSN---YQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNE 184 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTT---TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccc
Confidence 456789999999 556666654332 13689999999999999999999998 6 99999999999999775
No 328
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.86 E-value=2.8e-22 Score=223.24 Aligned_cols=147 Identities=27% Similarity=0.453 Sum_probs=125.6
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEE----
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQL---- 747 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---- 747 (845)
.++|...+.||+|+||.||+|... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888999999999999999975 58999999997642 22356788999999999999999999999876654
Q ss_pred --EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 748 --LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 748 --~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
++||||++ ++|.+.+.. .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 588877732 4899999999999999999999997 9999999999999999999999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+|+....
T Consensus 190 ~a~~~~~ 196 (371)
T 4exu_A 190 LARHADA 196 (371)
T ss_dssp CC-----
T ss_pred ccccccc
Confidence 9987653
No 329
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.86 E-value=9.1e-23 Score=221.42 Aligned_cols=158 Identities=22% Similarity=0.342 Sum_probs=133.0
Q ss_pred ccHHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCC--CCceeeEEEEE
Q 003134 666 YTLRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQ--HPNLVKLYGCC 741 (845)
Q Consensus 666 ~~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~ 741 (845)
+.++.+....++|+..+.||+|+||.||+|...+++.||+|++.... ....+.+.+|++++.+++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 33444444567799999999999999999999889999999986542 334568899999999997 59999999999
Q ss_pred EeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEE
Q 003134 742 VEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKI 821 (845)
Q Consensus 742 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl 821 (845)
...+..++||| +.+++|.+++... ..+++.++..++.|+++||+|||+++ |+||||||+|||+++ +.+||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEE
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEE
Confidence 99999999999 5688999999643 36899999999999999999999997 999999999999964 89999
Q ss_pred EeeccceecCCC
Q 003134 822 SDFGLAKLYEED 833 (845)
Q Consensus 822 ~DFGla~~~~~~ 833 (845)
+|||+++.+...
T Consensus 168 ~Dfg~~~~~~~~ 179 (313)
T 3cek_A 168 IDFGIANQMQPD 179 (313)
T ss_dssp CCCSSSCC----
T ss_pred eeccccccccCc
Confidence 999999987543
No 330
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.86 E-value=3.7e-22 Score=220.86 Aligned_cols=160 Identities=25% Similarity=0.361 Sum_probs=120.4
Q ss_pred HHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCE-
Q 003134 669 RQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ- 746 (845)
Q Consensus 669 ~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~- 746 (845)
.+.....++|+..+.||+|+||.||+|+.. +++.||||++.... ....++.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999985 58999999986542 333466778888899999999999999976433
Q ss_pred ------EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEeCCCCCCCEEecC-CC
Q 003134 747 ------LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH--EDSRIKIVHRDIKTSNVLLDK-DL 817 (845)
Q Consensus 747 ------~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH--~~~~~~ivHrDLKp~NILld~-~~ 817 (845)
.++||||+++ +|.+.+.... .....+++..+..++.|++.||+||| +.+ |+||||||+|||++. ++
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCC
Confidence 8899999987 4544443211 12246889999999999999999999 765 999999999999996 89
Q ss_pred cEEEEeeccceecCCCC
Q 003134 818 NAKISDFGLAKLYEEDK 834 (845)
Q Consensus 818 ~~kl~DFGla~~~~~~~ 834 (845)
.+||+|||+|+.+....
T Consensus 170 ~~kl~Dfg~a~~~~~~~ 186 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE 186 (360)
T ss_dssp EEEECCCTTCBCCCTTS
T ss_pred cEEEeeCCCceecCCCC
Confidence 99999999999876443
No 331
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.86 E-value=7.9e-22 Score=215.77 Aligned_cols=150 Identities=22% Similarity=0.374 Sum_probs=130.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEE-C-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCC------ceeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGIL-S-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP------NLVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~~~ 746 (845)
.++|+..+.||+|+||.||+|.. . +++.||+|+++.. ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45788999999999999999997 3 5889999999754 23356788899999888665 49999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC-----------
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK----------- 815 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~----------- 815 (845)
.++||||+ +++|.+++..... ..+++.++..++.|++.||+|||+++ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGF---LPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC---
T ss_pred EEEEEcCC-CCCHHHHHHhcCC---CCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcc
Confidence 99999999 8899999865422 36899999999999999999999997 999999999999987
Q ss_pred --------CCcEEEEeeccceecCC
Q 003134 816 --------DLNAKISDFGLAKLYEE 832 (845)
Q Consensus 816 --------~~~~kl~DFGla~~~~~ 832 (845)
++.+||+|||+|+....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~ 189 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDE 189 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTS
T ss_pred ccccccccCCCceEeeCcccccCcc
Confidence 67899999999997654
No 332
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.86 E-value=2.1e-22 Score=218.86 Aligned_cols=150 Identities=25% Similarity=0.492 Sum_probs=127.8
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 749 (845)
....++|+..+.||+|+||.||+|+... .+|+|+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 3345678899999999999999999853 48999987542 2334567889999999999999999999999999999
Q ss_pred EEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 750 V~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
||||+++++|.+++.... ..+++.++..++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||+++.
T Consensus 107 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp ECBCCCSEEHHHHTTSSC----CCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred EeecccCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 999999999999996532 36899999999999999999999997 99999999999998 67999999999886
Q ss_pred cC
Q 003134 830 YE 831 (845)
Q Consensus 830 ~~ 831 (845)
..
T Consensus 179 ~~ 180 (319)
T 2y4i_B 179 SG 180 (319)
T ss_dssp --
T ss_pred cc
Confidence 53
No 333
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.86 E-value=4e-22 Score=220.29 Aligned_cols=146 Identities=27% Similarity=0.454 Sum_probs=126.2
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEeCCE------
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQ------ 746 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------ 746 (845)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999975 58999999997542 2234678899999999999999999999987653
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeecc
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGL 826 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGl 826 (845)
.++||||++ |+|.+++.. .+++.++..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEecccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccc
Confidence 599999998 588877632 4899999999999999999999997 99999999999999999999999999
Q ss_pred ceecCC
Q 003134 827 AKLYEE 832 (845)
Q Consensus 827 a~~~~~ 832 (845)
++....
T Consensus 173 ~~~~~~ 178 (353)
T 3coi_A 173 ARHADA 178 (353)
T ss_dssp TTC---
T ss_pred ccCCCC
Confidence 987643
No 334
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.86 E-value=3.7e-22 Score=217.51 Aligned_cols=153 Identities=22% Similarity=0.367 Sum_probs=132.8
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccccc------chHHHHHHHHHHhcCC--CCceeeEEEEEE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQ------GNREFVNEIGMISAQQ--HPNLVKLYGCCV 742 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~~~ 742 (845)
....++|+..+.||+|+||.||+|+.. +++.||||+++..... ..+.+.+|++++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344578999999999999999999974 6899999999765321 2345678999999996 599999999999
Q ss_pred eCCEEEEEEeccCC-CChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec-CCCcEE
Q 003134 743 EGNQLLLVYEYMKN-NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD-KDLNAK 820 (845)
Q Consensus 743 ~~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld-~~~~~k 820 (845)
..+..++||||+.+ ++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+|||++ +++.+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999986 8999998542 36899999999999999999999987 99999999999999 789999
Q ss_pred EEeeccceecCC
Q 003134 821 ISDFGLAKLYEE 832 (845)
Q Consensus 821 l~DFGla~~~~~ 832 (845)
|+|||+++....
T Consensus 191 L~Dfg~~~~~~~ 202 (320)
T 3a99_A 191 LIDFGSGALLKD 202 (320)
T ss_dssp ECCCTTCEECCS
T ss_pred EeeCcccccccc
Confidence 999999998754
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=5.9e-23 Score=225.05 Aligned_cols=233 Identities=19% Similarity=0.230 Sum_probs=190.8
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCC-Cccccccc-ceeEEEecCCCCCCCcccccccccccceeE
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLS 169 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 169 (845)
.+++.+++.+|.+.+..+. +..+++|++|+|++|.+++. ++..+..+ +|++|+|++|++++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4688999999999987665 66899999999999999876 77778888 999999999999999999999999999999
Q ss_pred eecc-cCCCC-CCcccccCCCccEEEeecC-cCccc-CChhhhCCC-CCCcEEeecC--cCc-ccCchhhcCCcccceEE
Q 003134 170 IEGN-LFTGS-IPPDIRKLINLQKLILSSN-SFTGE-LPAELTKLT-NLNDLRISDN--NFS-GKIPEFIGKWKKIQKLH 241 (845)
Q Consensus 170 Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~ 241 (845)
|++| .+++. ++..+.++++|++|+|++| ++++. ++..+..++ +|++|+|++| .++ +.+|..+..+++|++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 9999 78853 6667889999999999999 99865 677789999 9999999999 566 56788889999999999
Q ss_pred ecCCc-CCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCC
Q 003134 242 IQGSS-LEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (845)
Q Consensus 242 Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 320 (845)
|++|. +++..+..+..+++|+.|++++|. .+.......+.++++|+.|+|++| ++.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~----------------------~~~~~~~~~l~~~~~L~~L~l~~~-i~~ 285 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY----------------------DIIPETLLELGEIPTLKTLQVFGI-VPD 285 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT----------------------TCCGGGGGGGGGCTTCCEEECTTS-SCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC----------------------CCCHHHHHHHhcCCCCCEEeccCc-cCH
Confidence 99999 787888889998888888776663 111111224667888999999988 442
Q ss_pred CCchhhhcCC-CcCEEEccCCcccCCCChhhh
Q 003134 321 GIPTTFEKLA-KTNFMYLTGNKLTGPVPKYIF 351 (845)
Q Consensus 321 ~~p~~~~~l~-~L~~L~L~~N~l~g~ip~~~~ 351 (845)
. .+..+. +|+.|++++|++++..|..+.
T Consensus 286 ~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 286 G---TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp T---CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred H---HHHHHHhhCcceEEecccCccccCCccc
Confidence 2 333332 366667899999988887654
No 336
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3.2e-21 Score=196.38 Aligned_cols=150 Identities=24% Similarity=0.314 Sum_probs=78.3
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.+++.+++++. +|..+ .++|++|+|++|++++..+..|..+ +|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 11 ~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 45666666663 44433 3567777777777766555545444 55555555555554444445555555555555555
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 55444444455555555555555555444444445555555555555555444444444444444444444443
No 337
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.85 E-value=8.4e-22 Score=224.10 Aligned_cols=150 Identities=26% Similarity=0.318 Sum_probs=120.4
Q ss_pred CCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEeccCC
Q 003134 678 FDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEYMKN 756 (845)
Q Consensus 678 y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~Ey~~~ 756 (845)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +||||+++++++.+++..++||||++
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 4456789999999998777778999999998653 245678999999876 89999999999999999999999996
Q ss_pred CChhhhhhcCCcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCC-------------CcEEE
Q 003134 757 NCLSRAIFGKDTEYR--LKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKD-------------LNAKI 821 (845)
Q Consensus 757 gsL~~~l~~~~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~-------------~~~kl 821 (845)
|+|.+++........ ...++..++.++.||+.||+|||+++ |+||||||+|||++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 699999976432111 11244567889999999999999987 9999999999999754 48999
Q ss_pred EeeccceecCCCC
Q 003134 822 SDFGLAKLYEEDK 834 (845)
Q Consensus 822 ~DFGla~~~~~~~ 834 (845)
+|||+|+.+....
T Consensus 170 ~DFG~a~~~~~~~ 182 (434)
T 2rio_A 170 SDFGLCKKLDSGQ 182 (434)
T ss_dssp CCCTTCEECCC--
T ss_pred cccccceecCCCC
Confidence 9999999886543
No 338
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.85 E-value=2.6e-21 Score=212.35 Aligned_cols=148 Identities=24% Similarity=0.332 Sum_probs=120.7
Q ss_pred hcCCCCCC-cccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCceeeEEEEEEe----CCEEE
Q 003134 675 TNNFDPAN-KVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVE----GNQLL 748 (845)
Q Consensus 675 ~~~y~~~~-~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~ 748 (845)
.++|...+ .||+|+||.||+|+.. +++.||+|++.... +...+....+..++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 45677744 6999999999999986 58999999986431 222223334566799999999999976 45689
Q ss_pred EEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC---CCcEEEEeec
Q 003134 749 LVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK---DLNAKISDFG 825 (845)
Q Consensus 749 lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~---~~~~kl~DFG 825 (845)
+||||+++|+|.+++..... ..+++.++..++.|++.||+|||+++ |+||||||+|||++. ++.+||+|||
T Consensus 103 lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGD---QAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-C---CCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEeccCCCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccc
Confidence 99999999999999975432 36899999999999999999999997 999999999999976 4559999999
Q ss_pred cceecCC
Q 003134 826 LAKLYEE 832 (845)
Q Consensus 826 la~~~~~ 832 (845)
+++....
T Consensus 177 ~~~~~~~ 183 (336)
T 3fhr_A 177 FAKETTQ 183 (336)
T ss_dssp TCEEC--
T ss_pred cceeccc
Confidence 9987754
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.6e-21 Score=224.45 Aligned_cols=202 Identities=24% Similarity=0.350 Sum_probs=164.5
Q ss_pred ce-eecCCCCcceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCccccc
Q 003134 82 NV-TCDCSSATCHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVL 159 (845)
Q Consensus 82 ~v-~C~~~~~~~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~ 159 (845)
++ .|.+. +++.|+|++|+|++ +|..+. ++|++|+|++|+|+. +| ..+ +|++|+|++|+|++ +|. +
T Consensus 52 ~l~~C~~~----~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l 118 (571)
T 3cvr_A 52 LLKECLIN----QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-L 118 (571)
T ss_dssp HHHHHHHT----TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-C
T ss_pred hccccccC----CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-h
Confidence 56 67643 78999999999997 787764 899999999999995 44 334 89999999999998 666 6
Q ss_pred ccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccce
Q 003134 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQK 239 (845)
Q Consensus 160 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 239 (845)
.+ +|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++
T Consensus 119 ~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~ 184 (571)
T 3cvr_A 119 PA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEA 184 (571)
T ss_dssp CT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCE
T ss_pred hc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCE
Confidence 65 99999999999997 676 68999999999999996 665 67899999999999997 677 66 89999
Q ss_pred EEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCC
Q 003134 240 LHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (845)
Q Consensus 240 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 319 (845)
|+|++|+|+ .+|. |.. +|.. ....|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+
T Consensus 185 L~Ls~N~L~-~lp~-~~~--~L~~----------------~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~ 243 (571)
T 3cvr_A 185 LDVSTNLLE-SLPA-VPV--RNHH----------------SEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLS 243 (571)
T ss_dssp EECCSSCCS-SCCC-CC--------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCC
T ss_pred EECcCCCCC-chhh-HHH--hhhc----------------ccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCC
Confidence 999999999 5565 543 3300 0114677788888888 47777777999999999999999
Q ss_pred CCCchhhhcCCC
Q 003134 320 GGIPTTFEKLAK 331 (845)
Q Consensus 320 g~~p~~~~~l~~ 331 (845)
+.+|..|..+..
T Consensus 244 ~~~p~~l~~l~~ 255 (571)
T 3cvr_A 244 SRIRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHHHH
T ss_pred CcCHHHHHHhhc
Confidence 999998887644
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=2.9e-21 Score=196.67 Aligned_cols=95 Identities=20% Similarity=0.238 Sum_probs=41.0
Q ss_pred ccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEec
Q 003134 164 TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQ 243 (845)
Q Consensus 164 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 243 (845)
+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444443333334444444444444444443333334444444444444444443333334444444444444
Q ss_pred CCcCCCCcchhhhcC
Q 003134 244 GSSLEGPIPASISAL 258 (845)
Q Consensus 244 ~N~l~g~~p~~~~~l 258 (845)
+|++++..+..|.++
T Consensus 109 ~N~l~~~~~~~~~~l 123 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKL 123 (208)
T ss_dssp SSCCCCCCTTTTTTC
T ss_pred CCcCcccCHhHhccC
Confidence 444443333333333
No 341
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.85 E-value=1e-21 Score=222.98 Aligned_cols=147 Identities=26% Similarity=0.340 Sum_probs=121.5
Q ss_pred cCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcC-CCCceeeEEEEEEeCCEEEEEEecc
Q 003134 676 NNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQ-QHPNLVKLYGCCVEGNQLLLVYEYM 754 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lV~Ey~ 754 (845)
.+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+.+..|+||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45778899999999997665566799999999965432 2356799999999 8999999999999999999999999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecC-----CCcEEEEeecccee
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDK-----DLNAKISDFGLAKL 829 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~-----~~~~kl~DFGla~~ 829 (845)
+ |+|.+++..... ...+.++..++.||+.||+|||+++ |+||||||+|||++. ...+||+|||+|+.
T Consensus 101 ~-g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 101 A-ATLQEYVEQKDF----AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp S-EEHHHHHHSSSC----CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred C-CCHHHHHHhcCC----CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 7 599999975432 3455577899999999999999997 999999999999943 34688999999998
Q ss_pred cCCC
Q 003134 830 YEED 833 (845)
Q Consensus 830 ~~~~ 833 (845)
....
T Consensus 173 ~~~~ 176 (432)
T 3p23_A 173 LAVG 176 (432)
T ss_dssp C---
T ss_pred ccCC
Confidence 7543
No 342
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.85 E-value=1.2e-21 Score=218.88 Aligned_cols=160 Identities=22% Similarity=0.318 Sum_probs=131.9
Q ss_pred cHHHHHHHhcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CC-----ceeeEEE
Q 003134 667 TLRQIKAATNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HP-----NLVKLYG 739 (845)
Q Consensus 667 ~~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~ 739 (845)
.++......++|+..+.||+|+||.||+|+.. +++.||||+++.. ....+++..|++++..++ |+ +|+++++
T Consensus 45 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 45 IVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp CCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred EeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence 33344445678999999999999999999976 5889999999754 233466778888888774 44 4999999
Q ss_pred EEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEec--CCC
Q 003134 740 CCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLD--KDL 817 (845)
Q Consensus 740 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld--~~~ 817 (845)
++...+..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||.+ ..+|+||||||+|||++ .++
T Consensus 124 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 124 HFMFRNHLCLVFEMLS-YNLYDLLRNTNF---RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp EEEETTEEEEEEECCC-CBHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred eeccCCceEEEEecCC-CCHHHHHhhcCc---CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 9999999999999996 599999865422 3589999999999999999999953 13599999999999994 578
Q ss_pred cEEEEeeccceecCC
Q 003134 818 NAKISDFGLAKLYEE 832 (845)
Q Consensus 818 ~~kl~DFGla~~~~~ 832 (845)
.+||+|||+|+....
T Consensus 199 ~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQ 213 (382)
T ss_dssp CEEECCCTTCEETTC
T ss_pred cEEEEeccCceeccc
Confidence 899999999998754
No 343
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.85 E-value=1.4e-21 Score=212.23 Aligned_cols=150 Identities=26% Similarity=0.477 Sum_probs=115.5
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-cc-hHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-QG-NREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .. .+.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356788899999999999999986 689999999975432 12 234445556788889999999999999999999999
Q ss_pred eccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 752 Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
||+ ++.+..+.... ...+++..+..++.|+++||+|||++ + |+||||||+||+++.++.+||+|||+++.+
T Consensus 104 e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp CCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred ecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 999 44555554321 23689999999999999999999985 6 999999999999999999999999999876
Q ss_pred CC
Q 003134 831 EE 832 (845)
Q Consensus 831 ~~ 832 (845)
..
T Consensus 176 ~~ 177 (318)
T 2dyl_A 176 VD 177 (318)
T ss_dssp --
T ss_pred cC
Confidence 54
No 344
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=3.2e-21 Score=198.45 Aligned_cols=167 Identities=21% Similarity=0.260 Sum_probs=105.5
Q ss_pred ceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCC
Q 003134 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGS 245 (845)
Q Consensus 166 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 245 (845)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555555555 3444433 45666666666666555555666666666666666666555666666666666666666
Q ss_pred cCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchh
Q 003134 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTT 325 (845)
Q Consensus 246 ~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 325 (845)
+|+...+..|.++++|+. |+|++|+|++..|..|..+++|+.|+|++|+|++..+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~-----------------------L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQL-----------------------LLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp CCCCCCTTTTTTCTTCCE-----------------------EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccCHhHccCCCCCCE-----------------------EECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 665444444444443333 344445555555666777777888888888888777777
Q ss_pred hhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 326 FEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
|..+++|+.|+|++| +|.|+|...++..|+...
T Consensus 148 ~~~l~~L~~L~L~~N------------------------------~~~c~c~l~~l~~~l~~~ 180 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQN------------------------------PFICDCHLKWLADYLHTN 180 (220)
T ss_dssp TTTCTTCCEEECCSS------------------------------CEECSGGGHHHHHHHHHC
T ss_pred HhCCCCCCEEEeCCC------------------------------CcCCCCccHHHHHHHHhC
Confidence 777777777777776 677999999998887653
No 345
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.85 E-value=2.5e-21 Score=213.29 Aligned_cols=150 Identities=19% Similarity=0.352 Sum_probs=127.8
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CC-cEEEEEEcCcccccchHHHHHHHHHHhcCCCCc------eeeEEEEEEeCCE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DG-TVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN------LVKLYGCCVEGNQ 746 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 746 (845)
.++|+..+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468899999999999999999975 34 78999999754 234567888999999887665 9999999999999
Q ss_pred EEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEe-------------
Q 003134 747 LLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLL------------- 813 (845)
Q Consensus 747 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILl------------- 813 (845)
.++||||+ ++++.+.+.... ...+++.++..++.||+.||+|||+++ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENN---FQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTT---TCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred EEEEEecc-CCChHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccc
Confidence 99999999 566777765432 136899999999999999999999986 9999999999999
Q ss_pred ------cCCCcEEEEeeccceecCC
Q 003134 814 ------DKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 814 ------d~~~~~kl~DFGla~~~~~ 832 (845)
+.++.+||+|||+++....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~ 194 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHE 194 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTS
T ss_pred cccccccCCCcEEEeecCccccccc
Confidence 6688999999999997654
No 346
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.84 E-value=1.5e-21 Score=227.43 Aligned_cols=136 Identities=21% Similarity=0.290 Sum_probs=108.7
Q ss_pred CCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc--------cchHHHHHHHHHHhcCCCCceeeEEEEEEeCCEEEEE
Q 003134 679 DPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 679 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
...+.||+|+||.||+|.. .++.+++|+...... ...+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567899999999999955 477888887644321 1134589999999999999999777777788888999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. ++||+|||+|+..
T Consensus 418 mE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 418 MSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 999999999999843 4589999999999999997 999999999999998 9999999999998
Q ss_pred CCC
Q 003134 831 EED 833 (845)
Q Consensus 831 ~~~ 833 (845)
...
T Consensus 480 ~~~ 482 (540)
T 3en9_A 480 NLD 482 (540)
T ss_dssp CCH
T ss_pred CCc
Confidence 654
No 347
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=4.3e-21 Score=197.43 Aligned_cols=167 Identities=20% Similarity=0.223 Sum_probs=111.0
Q ss_pred ceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCC-hhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecC
Q 003134 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELP-AELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 244 (845)
Q Consensus 166 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 244 (845)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35556666655 3454442 234566666666665533 3356666666666666666665555666666666666666
Q ss_pred CcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCch
Q 003134 245 SSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 324 (845)
Q Consensus 245 N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 324 (845)
|+|++..+..|.++++|+.| +|++|+|++..|..|.++++|+.|+|++|+|++..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L-----------------------~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTL-----------------------MLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEE-----------------------ECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccCHhHhcCCcCCCEE-----------------------ECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 66666555555555544433 4455555556677777788888888888888888888
Q ss_pred hhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCC
Q 003134 325 TFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 325 ~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~ 388 (845)
.|..+++|+.|+|++| +|.|+|...++.+|+...
T Consensus 148 ~~~~l~~L~~L~L~~N------------------------------~l~c~c~l~~l~~~~~~~ 181 (220)
T 2v70_A 148 AFDTLHSLSTLNLLAN------------------------------PFNCNCYLAWLGEWLRKK 181 (220)
T ss_dssp TTTTCTTCCEEECCSC------------------------------CEECSGGGHHHHHHHHHS
T ss_pred HhcCCCCCCEEEecCc------------------------------CCcCCCchHHHHHHHHhc
Confidence 8888888888888777 666899888888888643
No 348
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.84 E-value=6.8e-22 Score=232.43 Aligned_cols=153 Identities=28% Similarity=0.439 Sum_probs=131.0
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcc-cccchHHHHHHHHHHhcCCCCceeeEEEEEEe------CCEE
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSK-SRQGNREFVNEIGMISAQQHPNLVKLYGCCVE------GNQL 747 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~ 747 (845)
++|+..+.||+|+||.||+|.+. +++.||||+++.. .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 67999999999999999999975 5899999998764 23345678999999999999999999998765 6678
Q ss_pred EEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCCCEEecCCCc---EEEEee
Q 003134 748 LLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN---AKISDF 824 (845)
Q Consensus 748 ~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~NILld~~~~---~kl~DF 824 (845)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+||
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~--~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN--CCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC--TTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEeCCCCCHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence 999999999999999976432 235889999999999999999999987 999999999999997665 999999
Q ss_pred ccceecCCC
Q 003134 825 GLAKLYEED 833 (845)
Q Consensus 825 Gla~~~~~~ 833 (845)
|+++.....
T Consensus 169 G~a~~~~~~ 177 (676)
T 3qa8_A 169 GYAKELDQG 177 (676)
T ss_dssp CCCCBTTSC
T ss_pred ccccccccc
Confidence 999987543
No 349
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.84 E-value=1.8e-21 Score=216.28 Aligned_cols=150 Identities=25% Similarity=0.368 Sum_probs=128.1
Q ss_pred hcCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-----------CCceeeEEEEEE
Q 003134 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-----------HPNLVKLYGCCV 742 (845)
Q Consensus 675 ~~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~ 742 (845)
.++|...+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++.+++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357889999999999999999974 6899999999753 233567888999988876 899999999998
Q ss_pred eCC----EEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEeCCCCCCCEEec---
Q 003134 743 EGN----QLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-SRIKIVHRDIKTSNVLLD--- 814 (845)
Q Consensus 743 ~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-~~~~ivHrDLKp~NILld--- 814 (845)
..+ ..++||||+ +++|.+++..... ..+++.++..++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH---RGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT---SCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc---cCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccC
Confidence 654 789999999 8899999865322 3589999999999999999999997 6 99999999999994
Q ss_pred ---CCCcEEEEeeccceecCC
Q 003134 815 ---KDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 815 ---~~~~~kl~DFGla~~~~~ 832 (845)
..+.+||+|||+|+....
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~ 190 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDE 190 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTB
T ss_pred CCcCcceEEEcccccccccCC
Confidence 445899999999998754
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=2.4e-21 Score=214.82 Aligned_cols=173 Identities=24% Similarity=0.171 Sum_probs=86.0
Q ss_pred CEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccc-cccccceeEeecccCCCCCCcccccCCCccEEEeecC
Q 003134 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLT-NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSN 197 (845)
Q Consensus 119 ~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 197 (845)
+.+++++|+|+.++. .+.. .++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 21 ~~l~c~~~~l~~iP~-~~~~-~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 21 NILSCSKQQLPNVPQ-SLPS-YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp TEEECCSSCCSSCCS-SCCT-TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCccCc-cCCC-CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 467787777775322 2111 344555555555544444444 4455555555555554444444444444444444444
Q ss_pred cCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCc
Q 003134 198 SFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFP 277 (845)
Q Consensus 198 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~ 277 (845)
+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------------- 150 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR---------------------------- 150 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS----------------------------
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe----------------------------
Confidence 4444334444444444444444444444444444444444444444444332
Q ss_pred ccccCCccEEEccCCcCcccCcccc---cCCCCcCEEeCCCCCCCCCCchhhhcCCCc--CEEEccCC
Q 003134 278 KLDKMNLKTLILTKCLIHGEIPDYI---GDMTKLKNIDLSFNNLTGGIPTTFEKLAKT--NFMYLTGN 340 (845)
Q Consensus 278 ~l~~~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L--~~L~L~~N 340 (845)
..+..| ..+++|+.|||++|+|++..+..|..++.+ +.|+|++|
T Consensus 151 -------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 151 -------------------FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp -------------------CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred -------------------eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 112222 346677777777777776666667666653 44444444
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=4.9e-21 Score=204.64 Aligned_cols=146 Identities=18% Similarity=0.128 Sum_probs=117.2
Q ss_pred HHHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc------------------cchHHHHHHHHHHhcC
Q 003134 668 LRQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR------------------QGNREFVNEIGMISAQ 729 (845)
Q Consensus 668 ~~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 729 (845)
+..+......|...+.||+|+||.||+|.+.+|+.||+|.++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444455556777899999999999999997799999999965321 1245689999999999
Q ss_pred CCCceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCCCC
Q 003134 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTS 809 (845)
Q Consensus 730 ~H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDLKp~ 809 (845)
+ | +++.+++.. +..++||||+++|+|.+ +.. .+...++.|++.||+|||+.+ |+||||||+
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~ 222 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQY 222 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTT
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHH
Confidence 9 4 566665443 45699999999999988 421 234579999999999999987 999999999
Q ss_pred CEEecCCCcEEEEeeccceecCCC
Q 003134 810 NVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 810 NILld~~~~~kl~DFGla~~~~~~ 833 (845)
|||++ ++.+||+|||+|+.....
T Consensus 223 NILl~-~~~vkl~DFG~a~~~~~~ 245 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVEVGEE 245 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEETTST
T ss_pred HEEEE-CCcEEEEECCCCeECCCC
Confidence 99999 999999999999987543
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=4.9e-22 Score=239.77 Aligned_cols=266 Identities=21% Similarity=0.195 Sum_probs=92.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccCCCCCCCccceeecCCCCcceEEEEEecCCCccccCCccccCC
Q 003134 36 LHAEEVKALKQIGRKLGKKDWNFGVDPCSQKGNWELSSDDKKGFESNVTCDCSSATCHVVTIALKAQNLTGTLPTELSKL 115 (845)
Q Consensus 36 ~~~~~~~aL~~~~~~~~~~~W~~~~d~c~~~~~w~~~~~~~~~~~~~v~C~~~~~~~~v~~L~l~~~~l~g~~p~~l~~L 115 (845)
....++++|++++.++...+|.... +|.... .....|.++.+. .++++.|+|.++++... +.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~s----~~~~~~l~L~~n~~~~~-~~----- 190 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQ-------QPTGDS-TPSGTATNSAVS----TPLTPKIELFANGKDEA-NQ----- 190 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccC-------CCcCCC-CccccCCCceec----CCccceEEeeCCCCCcc-hh-----
Confidence 4566888999999988655554221 121111 011112234433 36789999999988863 33
Q ss_pred CCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEee
Q 003134 116 RYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILS 195 (845)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 195 (845)
..|+.++|++|.|.+ ++++.|++. ..|..|..+++|+.|+|++|+|. .+|..+.++++|++|+|+
T Consensus 191 ~~l~~l~Ls~~~i~~-------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 191 ALLQHKKLSQYSIDE-------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLN 255 (727)
T ss_dssp ---------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCT
T ss_pred hHhhcCccCcccccC-------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEee
Confidence 235566666665553 234444444 44555555555666666666655 455555555566666666
Q ss_pred cCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCC
Q 003134 196 SNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESA 275 (845)
Q Consensus 196 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~ 275 (845)
+|+|+ .+|..|.+|++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+ .+|..|+++++|+.|+|++|.+++..
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCC
Confidence 66655 55555555566666666666655 44555555556666666666554 44555555555555555554444433
Q ss_pred CcccccC--CccEEEccCCcCcccCcccccCCCCcCEEeCCCC--------CCCCCCchhhhcCCCcCEEEccCCccc
Q 003134 276 FPKLDKM--NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFN--------NLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 276 ~~~l~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--------~l~g~~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
+..+... .+..|+|++|.+++.+|. .|+.|+++.| .|.+..+..+.++.++....+++|-+.
T Consensus 333 p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 333 LKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----------------------------------------CCC
T ss_pred hHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 3332221 122356777777777664 3455566665 333333444445555555555555544
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=5.7e-20 Score=189.04 Aligned_cols=151 Identities=21% Similarity=0.314 Sum_probs=115.8
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.+++++++++ .+|..+. ++|+.|+|++|+|+++.+..|..+ +|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 5788888888 4666554 688888888888888777777777 78888888888877777777778888888888888
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
|+...+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 775555556777778888888887777777777777777777777777777666677777777777777777753
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=5.1e-20 Score=189.40 Aligned_cols=154 Identities=18% Similarity=0.243 Sum_probs=120.9
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCc-cccccc-ceeEEEecCCCCCCCcccccccccccceeEeecc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFS-PQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 173 (845)
.++++++.++. +|..+. +.+++|+|++|+|++..+ ..|..+ +|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 78899999885 676664 456889999999888755 446666 7888888888888777777888888888888888
Q ss_pred cCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 174 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
+|++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 8887777777888888888888888887777778888888888888888887777788888888888888888776543
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4e-20 Score=205.05 Aligned_cols=173 Identities=21% Similarity=0.217 Sum_probs=150.8
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccc-cc-ceeEEEecCCCCCCCcccccccccccceeEeecc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWA-SL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGN 173 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~-~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 173 (845)
.+++++++|+. +|..+. +.|+.|+|++|+|++..+..+. .+ +|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 68999999985 677664 4689999999999999999887 77 9999999999999998899999999999999999
Q ss_pred cCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhh---cCCcccceEEecCCcCCCC
Q 003134 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFI---GKWKKIQKLHIQGSSLEGP 250 (845)
Q Consensus 174 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~g~ 250 (845)
+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++.
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 9998878889999999999999999998889999999999999999999997666666 6799999999999999987
Q ss_pred cchhhhcCCCC--CEEEcCCCCC
Q 003134 251 IPASISALTSL--TDLRISDLKG 271 (845)
Q Consensus 251 ~p~~~~~l~~L--~~L~Ls~n~~ 271 (845)
.+..+..++.+ +.|+|++|.+
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCE
T ss_pred CHHHhhhccHhhcceEEecCCCc
Confidence 77888887753 5555555543
No 356
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.3e-19 Score=187.55 Aligned_cols=151 Identities=23% Similarity=0.317 Sum_probs=82.6
Q ss_pred ceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCC
Q 003134 166 KNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGS 245 (845)
Q Consensus 166 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 245 (845)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34444444444 3333332 44555555555555444444555555555555555554443344455555555555555
Q ss_pred cCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchh
Q 003134 246 SLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTT 325 (845)
Q Consensus 246 ~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 325 (845)
+|++..+..|..+++|+.| +|++|+|+ .+|..+..+++|++|+|++|+|++..+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L-----------------------~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKEL-----------------------FMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEE-----------------------ECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred cCCccChhHhCcchhhCeE-----------------------eccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 5554444444444443333 23333333 44555666778888888888888776677
Q ss_pred hhcCCCcCEEEccCCccc
Q 003134 326 FEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~ 343 (845)
|..+++|+.|+|++|.++
T Consensus 155 ~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTCTTCCEEECTTSCBC
T ss_pred HhCCCCCCEEEeeCCCcc
Confidence 888888888887777443
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.9e-19 Score=191.99 Aligned_cols=170 Identities=22% Similarity=0.348 Sum_probs=96.2
Q ss_pred cccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceE
Q 003134 161 NITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKL 240 (845)
Q Consensus 161 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 240 (845)
.+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 455555555555555522 2 24555555555555555553322 5555555555555555553 22 25555555555
Q ss_pred EecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCC
Q 003134 241 HIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLT 319 (845)
Q Consensus 241 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 319 (845)
+|++|++++. ..+..+++|+.|++++|.++.. ..+.. .+|+.|+|++|+|++..| +..+++|+.|+|++|+|+
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 5555555542 2345555555555555544443 12222 255566666666665554 777788888888888887
Q ss_pred CCCchhhhcCCCcCEEEccCCcccC
Q 003134 320 GGIPTTFEKLAKTNFMYLTGNKLTG 344 (845)
Q Consensus 320 g~~p~~~~~l~~L~~L~L~~N~l~g 344 (845)
+ +| .+..+++|+.|++++|+++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 5 34 37778888888888887763
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.3e-19 Score=213.37 Aligned_cols=187 Identities=20% Similarity=0.313 Sum_probs=124.7
Q ss_pred EEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 96 TIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 96 ~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
.+.+..+.+...++ +..|++|+.|+|++|.|+... .+..+ +|+.|+|++|+|++..| +..+++|+.|+|++|+
T Consensus 25 ~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 25 KDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred HHhccCCCcccccc--hhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCC
Confidence 34455555554433 456777888888888877653 35555 77777777777776555 7777777777777777
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchh
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPAS 254 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 254 (845)
|++ +| .+..+++|++|+|++|+|++. ..+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|+|++..|
T Consensus 99 l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 774 33 577777777777777777742 3477777777777777777754 567777777777777777776655
Q ss_pred hhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCC
Q 003134 255 ISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 321 (845)
Q Consensus 255 ~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 321 (845)
+..+++|+.|+|++|.+ ++. ..+..+++|+.|+|++|++++.
T Consensus 171 l~~l~~L~~L~Ls~N~i-----------------------~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHI-----------------------SDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GTTCTTCCEEECCSSCC-----------------------CBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hccCCCCCEEECcCCCC-----------------------CCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66666666665555544 432 2355566666666666666644
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.1e-19 Score=184.69 Aligned_cols=152 Identities=21% Similarity=0.292 Sum_probs=124.5
Q ss_pred EEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccC
Q 003134 97 IALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLF 175 (845)
Q Consensus 97 L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 175 (845)
+++++++++ .+|..+. ++|++|+|++|+|++..|..|..+ +|++|+|++|+|+...+..|.++++|++|+|++|+|
T Consensus 24 v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l 100 (229)
T 3e6j_A 24 VDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100 (229)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcC
Confidence 444455565 5666554 889999999999999888888888 888999999988877777788888899999999988
Q ss_pred CCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 176 TGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 176 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..+
T Consensus 101 ~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 101 TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8777777888888888888888888 778888888888888888888887777778888888888888888876543
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.8e-19 Score=212.23 Aligned_cols=188 Identities=21% Similarity=0.322 Sum_probs=126.0
Q ss_pred eEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecC
Q 003134 142 VELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 221 (845)
Q Consensus 142 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 221 (845)
..+.+..+.+....+ +..|++|+.|+|++|.|+. +| .|..+++|++|+|++|+|++..| +..+++|++|+|++|
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 334444444443322 4456666666666666663 33 46666666666666666665433 666666666666666
Q ss_pred cCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcc
Q 003134 222 NFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPD 300 (845)
Q Consensus 222 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~ 300 (845)
+|++ +| .+..+++|++|+|++|+|++. ..+..+++|+.|+|++|.++.. ..+.. .+|+.|+|++|+|++..|
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 6664 22 566666666666666666653 3466666666666666666654 22332 267788888888887777
Q ss_pred cccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC
Q 003134 301 YIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 301 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 88999999999999999964 4689999999999999999853
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.1e-19 Score=195.17 Aligned_cols=172 Identities=20% Similarity=0.335 Sum_probs=104.0
Q ss_pred cCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
..+++|+.|++++|.++... .+..+ +|++|+|++|++++..+ +.++++|++|+|++|++++ + +.+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCE
Confidence 45566666666666666542 24444 56666666666665443 5666666666666666664 2 23566666666
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKG 271 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~ 271 (845)
|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++..| +..+++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~----------- 179 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTK----------- 179 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTT-----------
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCc-----------
Confidence 66666666542 3455666666666666666643 445566666666666666665443 445554
Q ss_pred CCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCC
Q 003134 272 SESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGG 321 (845)
Q Consensus 272 ~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 321 (845)
|+.|+|++|.|++. | .+..+++|+.|+|++|+++..
T Consensus 180 ------------L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 180 ------------LQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp ------------CCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred ------------cCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 44555566666543 3 378889999999999998853
No 362
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.79 E-value=1.5e-20 Score=222.29 Aligned_cols=274 Identities=12% Similarity=0.074 Sum_probs=139.6
Q ss_pred eEEEEEecCCCcccc----CCccccCCCCCCEEeccCCcccCCCcc----ccccc-ceeEEEecCCCCCCCccccccccc
Q 003134 93 HVVTIALKAQNLTGT----LPTELSKLRYLKQLDLSRNCLTGSFSP----QWASL-QLVELSVMGNRLSGPFPKVLTNIT 163 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~----~p~~l~~L~~L~~L~Ls~N~l~~~~~~----~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~ 163 (845)
+++.|+|++|.+++. ++..+..+++|++|+|++|.+++.... .+..+ +|++|+|++|.+.+ +|..+.+++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 456666666666544 333445556666666666666533222 22223 56666666665543 233333333
Q ss_pred ccceeEeeccc--------------------------CCCCCCcccccCCCccEEEeecCcCcccCC-------------
Q 003134 164 TLKNLSIEGNL--------------------------FTGSIPPDIRKLINLQKLILSSNSFTGELP------------- 204 (845)
Q Consensus 164 ~L~~L~Ls~N~--------------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p------------- 204 (845)
+|++|+++.+. ..+.+|..+..+++|++|+|++|.+++...
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L 323 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVL 323 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEE
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEE
Confidence 33333333210 011233334445555555555555443222
Q ss_pred ------------hhhhCCCCCCcEEee-----------cCcCccc-CchhhcCCcccceEEecCCcCCCCcchhhhc-CC
Q 003134 205 ------------AELTKLTNLNDLRIS-----------DNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIPASISA-LT 259 (845)
Q Consensus 205 ------------~~~~~l~~L~~L~Ls-----------~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~ 259 (845)
..+..+++|++|+|+ .|.+++. ++..+..+++|++|+++.|++++..+..++. ++
T Consensus 324 ~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 324 ETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp EEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred eccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 222344555555555 2444432 1222334556666666666666555555544 66
Q ss_pred CCCEEEcC----CCCCCCCCCc-----ccc-cCCccEEEccCC--cCcccCccccc-CCCCcCEEeCCCCCCCC-CCchh
Q 003134 260 SLTDLRIS----DLKGSESAFP-----KLD-KMNLKTLILTKC--LIHGEIPDYIG-DMTKLKNIDLSFNNLTG-GIPTT 325 (845)
Q Consensus 260 ~L~~L~Ls----~n~~~~~~~~-----~l~-~~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g-~~p~~ 325 (845)
+|+.|+++ .|.+++.+.. .+. ..+|+.|+|++| .+++..+..+. .+++|++|+|++|++++ .++..
T Consensus 404 ~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp SCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 66666664 4444443221 011 225667776543 25555444443 36677777777777764 23444
Q ss_pred hhcCCCcCEEEccCCcccCCCChhh---hcCCceEEeecCCCcCC
Q 003134 326 FEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWE 367 (845)
Q Consensus 326 ~~~l~~L~~L~L~~N~l~g~ip~~~---~~~l~~L~ls~N~l~~~ 367 (845)
+..+++|++|+|++|++++.....+ ..+|+.|+|++|+++..
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 5667777777777777654433222 34677777777776643
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=2.2e-18 Score=173.89 Aligned_cols=157 Identities=18% Similarity=0.294 Sum_probs=115.3
Q ss_pred ccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCccc
Q 003134 158 VLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKI 237 (845)
Q Consensus 158 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 237 (845)
....+++|++|+|++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..|..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3466788888888888888 555 6788888888888888665 34467888888888888888887777888888888
Q ss_pred ceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCC
Q 003134 238 QKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNN 317 (845)
Q Consensus 238 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 317 (845)
++|+|++|++++..|..++.+++|+.|++++|.. ++ .+| .+..+++|+.|+|++|+
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~----------------------i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA----------------------IT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB----------------------CC-CCG-GGGGCSSCCEEECTTBC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC----------------------cc-ccH-hhcCCCCCCEEECCCCC
Confidence 8888888888877777787777766665554430 22 233 46777888888888888
Q ss_pred CCCCCchhhhcCCCcCEEEccCCcccC
Q 003134 318 LTGGIPTTFEKLAKTNFMYLTGNKLTG 344 (845)
Q Consensus 318 l~g~~p~~~~~l~~L~~L~L~~N~l~g 344 (845)
+++ ++ .+..+++|+.|++++|++.+
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 885 33 67888888888888887753
No 364
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.77 E-value=2.9e-19 Score=201.72 Aligned_cols=153 Identities=14% Similarity=0.113 Sum_probs=113.9
Q ss_pred cCCCCCCcccccCcEEEEEEEEC-CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCC-Cce---------e------
Q 003134 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQH-PNL---------V------ 735 (845)
Q Consensus 676 ~~y~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~nI---------v------ 735 (845)
.+|...+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.++..++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34666789999999999999965 58999999987432 2336789999999999987 211 1
Q ss_pred ------eEEEEEEe-----CCEEEEEEeccCCCChhhhhhcCC--cccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 003134 736 ------KLYGCCVE-----GNQLLLVYEYMKNNCLSRAIFGKD--TEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIV 802 (845)
Q Consensus 736 ------~l~~~~~~-----~~~~~lV~Ey~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iv 802 (845)
.+..++.. ....+++|+++ +++|.+++.... ......+++..++.++.||++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 11111111 12356777765 579998884211 011235788999999999999999999997 99
Q ss_pred eCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 803 HRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 803 HrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
||||||+|||++.++.+||+|||+|+....
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~ 263 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA 263 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTE
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCC
Confidence 999999999999999999999999987643
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=4.6e-21 Score=224.52 Aligned_cols=201 Identities=16% Similarity=0.183 Sum_probs=126.6
Q ss_pred cCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCC-------------CCCCcccccccccccceeE-eecccCCC
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNR-------------LSGPFPKVLTNITTLKNLS-IEGNLFTG 177 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~g 177 (845)
..+++|+.|+|++|+|+ .+|..++.+ +|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56777777777777776 456666666 67777765554 4445555555566666655 444432
Q ss_pred CCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhc
Q 003134 178 SIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISA 257 (845)
Q Consensus 178 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 257 (845)
.+|+.+.+++|.++...+ ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|++
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234444455555542211 246777777777775 455 777777777777777777 56667777
Q ss_pred CCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCC-chhhhcCCCcCEEE
Q 003134 258 LTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI-PTTFEKLAKTNFMY 336 (845)
Q Consensus 258 l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~ 336 (845)
+++|+.| +|++|+|++ +| .|+++++|+.|+|++|+|++.+ |..|..+++|+.|+
T Consensus 485 l~~L~~L-----------------------~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 485 LRCLEVL-----------------------QASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp CTTCCEE-----------------------ECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred CCCCCEE-----------------------ECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 7666555 444555554 45 6677777777777777777666 77777777777777
Q ss_pred ccCCcccCCCChh--h---hcCCceEEe
Q 003134 337 LTGNKLTGPVPKY--I---FNSNKNVDI 359 (845)
Q Consensus 337 L~~N~l~g~ip~~--~---~~~l~~L~l 359 (845)
|++|+|++..|.. + .++|+.||+
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777777655432 1 345666653
No 366
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=4.6e-19 Score=186.87 Aligned_cols=139 Identities=17% Similarity=0.146 Sum_probs=107.9
Q ss_pred CCCCCcccccCcEEEEEEEE-CCCcE--EEEEEcCccccc------------------------chHHHHHHHHHHhcCC
Q 003134 678 FDPANKVGEGGFGSVYKGIL-SDGTV--IAVKQLSSKSRQ------------------------GNREFVNEIGMISAQQ 730 (845)
Q Consensus 678 y~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 730 (845)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 67888 999987543111 0136789999999998
Q ss_pred CCce--eeEEEEEEeCCEEEEEEeccCC-C----ChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeE
Q 003134 731 HPNL--VKLYGCCVEGNQLLLVYEYMKN-N----CLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLH-EDSRIKIV 802 (845)
Q Consensus 731 H~nI--v~l~~~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~iv 802 (845)
|+++ +.++++ +..+|||||+.+ | +|.+.... .++.++..++.|++.||.||| +.+ |+
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~g---iv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAE---LV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSC---EE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence 8754 444432 246899999953 4 56555421 234567899999999999999 776 99
Q ss_pred eCCCCCCCEEecCCCcEEEEeeccceecCCC
Q 003134 803 HRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (845)
Q Consensus 803 HrDLKp~NILld~~~~~kl~DFGla~~~~~~ 833 (845)
||||||+|||+++ .++|+|||+|.....+
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~~~~ 222 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTLRHP 222 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence 9999999999988 9999999999987543
No 367
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=2.7e-20 Score=220.08 Aligned_cols=273 Identities=14% Similarity=0.081 Sum_probs=170.0
Q ss_pred eEEEEEecCCC-ccc-cCCccccCCCCCCEEeccCCcccCCCc----cccccc-ceeEEEecCCCCCC----Cccccccc
Q 003134 93 HVVTIALKAQN-LTG-TLPTELSKLRYLKQLDLSRNCLTGSFS----PQWASL-QLVELSVMGNRLSG----PFPKVLTN 161 (845)
Q Consensus 93 ~v~~L~l~~~~-l~g-~~p~~l~~L~~L~~L~Ls~N~l~~~~~----~~~~~l-~L~~L~Ls~N~l~~----~~p~~~~~ 161 (845)
+++.|+|.++. ++. .++..+.++++|++|+|++|.+++... ..+..+ +|++|+|++|++++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48999999886 221 233334588999999999999987633 333444 89999999999983 44556678
Q ss_pred ccccceeEeecccCCCCCCcccccCCCccEEEeecCcCc--------------------------ccCChhhhCCCCCCc
Q 003134 162 ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFT--------------------------GELPAELTKLTNLND 215 (845)
Q Consensus 162 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--------------------------g~~p~~~~~l~~L~~ 215 (845)
+++|++|+|++|.+.+ +|..+.++++|++|+++.+... +.+|..+..+++|++
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcE
Confidence 8999999999999985 6778888888888888753222 223444445556666
Q ss_pred EEeecCcCcccCc-hhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCC-----------CCCCCCCCccc-c-c
Q 003134 216 LRISDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISD-----------LKGSESAFPKL-D-K 281 (845)
Q Consensus 216 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~-----------n~~~~~~~~~l-~-~ 281 (845)
|+|++|.+++... ..+..+++|++|+++++...+.++..+..+++|+.|++++ +.++......+ . .
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC 377 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHC
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhC
Confidence 6666666543322 2345556666666652222223333445566666666662 33333222211 1 2
Q ss_pred CCccEEEccCCcCcccCcccccC-CCCcCEEeCC----CCCCCCC-----CchhhhcCCCcCEEEccCC--cccCCCChh
Q 003134 282 MNLKTLILTKCLIHGEIPDYIGD-MTKLKNIDLS----FNNLTGG-----IPTTFEKLAKTNFMYLTGN--KLTGPVPKY 349 (845)
Q Consensus 282 ~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~g~-----~p~~~~~l~~L~~L~L~~N--~l~g~ip~~ 349 (845)
.+|++|+|+.|.+++..+..+.. +++|+.|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 26777777777777666666554 6677777774 6666653 3334566777777777533 355444443
Q ss_pred h---hcCCceEEeecCCCcC
Q 003134 350 I---FNSNKNVDISLNNFTW 366 (845)
Q Consensus 350 ~---~~~l~~L~ls~N~l~~ 366 (845)
+ ..+|+.|++++|++++
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~ 477 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESD 477 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSH
T ss_pred HHHhCccceEeeccCCCCCH
Confidence 3 2356777777776654
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=4e-18 Score=171.92 Aligned_cols=150 Identities=17% Similarity=0.236 Sum_probs=75.8
Q ss_pred cCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccE
Q 003134 113 SKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQK 191 (845)
Q Consensus 113 ~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 191 (845)
..+++|++|++++|.++.. | .+..+ +|++|++++|.++ .+..+..+++|++|+|++|++++..|..|..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDL-T-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCSCC-T-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCccCh-H-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 4455666666666666532 2 23333 4555555555443 2234555555555555555555444555555555555
Q ss_pred EEeecCcCcccCChhhhCCCCCCcEEeecCc-CcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCC
Q 003134 192 LILSSNSFTGELPAELTKLTNLNDLRISDNN-FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLK 270 (845)
Q Consensus 192 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~ 270 (845)
|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 5555555555455555555555555555555 33 333 355555555555555555532 2 44444444444444443
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2e-18 Score=182.60 Aligned_cols=168 Identities=21% Similarity=0.338 Sum_probs=99.2
Q ss_pred ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEee
Q 003134 140 QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (845)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 219 (845)
++..+++++|.+++.. .+..+++|++|+|++|+++ .+| .+..+++|++|+|++|+|++..+ +.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 4555566666666433 4556666666666666666 334 46666666666666666664333 6666666666666
Q ss_pred cCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCc
Q 003134 220 DNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP 299 (845)
Q Consensus 220 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p 299 (845)
+|++++ +|... . ++|++|+|++|++++. ..+..+++|+ .|+|++|+|++. +
T Consensus 94 ~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~-----------------------~L~Ls~N~i~~~-~ 144 (263)
T 1xeu_A 94 RNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLE-----------------------ILSIRNNKLKSI-V 144 (263)
T ss_dssp SSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCC-----------------------EEECTTSCCCBC-G
T ss_pred CCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCccccc-----------------------EEECCCCcCCCC-h
Confidence 666664 23222 2 5566666666666542 1344444443 444455555543 2
Q ss_pred ccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCC
Q 003134 300 DYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGP 345 (845)
Q Consensus 300 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ 345 (845)
.+..+++|+.|+|++|+|++. ..+..+++|+.|++++|++++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 466677777777777777755 5667777777777777777643
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=7.2e-20 Score=214.37 Aligned_cols=188 Identities=12% Similarity=0.101 Sum_probs=135.3
Q ss_pred ccccccceeEeecccCCCCCCcccccCCCccEEEeecCc-------------CcccCChhhhCCCCCCcEE-eecCcCcc
Q 003134 160 TNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS-------------FTGELPAELTKLTNLNDLR-ISDNNFSG 225 (845)
Q Consensus 160 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-------------l~g~~p~~~~~l~~L~~L~-Ls~N~l~~ 225 (845)
..+++|+.|+|++|+|+ .+|..++++++|++|++++|. +.+.+|..++++++|+.|+ ++.|++.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45677777778887776 677777777777777776664 4455555666666666666 4554432
Q ss_pred cCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcccCcccccC
Q 003134 226 KIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGD 304 (845)
Q Consensus 226 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~ 304 (845)
+|..+.+++|.++...+ ..|+.|+|++|.++..+. +..+ +|+.|+|++|+|+ .+|..|++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~lp~--~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSSCCC--GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCCCcC--ccccccCcEeecCccccc-ccchhhhc
Confidence 22333333344332111 135666666666665432 3332 6777788888888 78899999
Q ss_pred CCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCC-Chhhh--cCCceEEeecCCCcCCCCC
Q 003134 305 MTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPV-PKYIF--NSNKNVDISLNNFTWESSD 370 (845)
Q Consensus 305 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~i-p~~~~--~~l~~L~ls~N~l~~~~p~ 370 (845)
+++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.. |..+. .+|+.|+|++|++++.+|.
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 9999999999999997 67 8999999999999999999887 88874 5899999999999988773
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=2.7e-18 Score=181.52 Aligned_cols=171 Identities=18% Similarity=0.238 Sum_probs=140.0
Q ss_pred CCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEE
Q 003134 114 KLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (845)
Q Consensus 114 ~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 192 (845)
++.++..+++++|.+++.. .+..+ +|++|++++|+|+. ++ .+..+++|++|+|++|+|++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5677888999999999765 46666 89999999999995 44 78999999999999999996544 9999999999
Q ss_pred EeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCC
Q 003134 193 ILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGS 272 (845)
Q Consensus 193 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~ 272 (845)
+|++|++++ +|. +.. ++|++|+|++|+|++. + .+..+++|++|+|++|++++. + .+..+++|+.|+++
T Consensus 91 ~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~----- 158 (263)
T 1xeu_A 91 SVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLH----- 158 (263)
T ss_dssp ECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECT-----
T ss_pred ECCCCccCC-cCc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECC-----
Confidence 999999996 443 333 8999999999999964 3 699999999999999999975 3 67777776666555
Q ss_pred CCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCC
Q 003134 273 ESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGI 322 (845)
Q Consensus 273 ~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~ 322 (845)
+|+|++. ..+..+++|+.|+|++|++++..
T Consensus 159 ------------------~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 159 ------------------GNEITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp ------------------TSCCCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred ------------------CCcCcch--HHhccCCCCCEEeCCCCcccCCc
Confidence 4555544 45777888999999999888553
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.5e-18 Score=209.37 Aligned_cols=202 Identities=20% Similarity=0.216 Sum_probs=110.1
Q ss_pred EEEEEecCCCccc---------cCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCccccccccc
Q 003134 94 VVTIALKAQNLTG---------TLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNIT 163 (845)
Q Consensus 94 v~~L~l~~~~l~g---------~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~ 163 (845)
+..++|+.+.|.+ ..|..|..++.|+.|+|++|.|+.+ |..+..+ +|++|+|++|+|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNI-SANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCSCC-CGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCC-ChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3445555555443 3466788888888888888888844 4444455 7888888888888 7778888888
Q ss_pred ccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcc-cceEEe
Q 003134 164 TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKK-IQKLHI 242 (845)
Q Consensus 164 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L 242 (845)
+|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|..+..+.. +..|+|
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 8888888888888 67888888888888888888887 67777888888888888888888888877765432 234778
Q ss_pred cCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCC
Q 003134 243 QGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTG 320 (845)
Q Consensus 243 s~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 320 (845)
++|.++|.+|..+ ..|+++.|... ....+.|.+..+..+.++.+++...+++|-+.+
T Consensus 349 ~~N~l~~~~p~~l------~~l~l~~n~~~---------------~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 349 RDNRPEIPLPHER------RFIEINTDGEP---------------QREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHCCCCCCCCCC--------------------------------------------------------------CCCG
T ss_pred ccCcccCcCcccc------ceeEeeccccc---------------ccccCCccccccchhhcccccceeeeecccccc
Confidence 8888888777643 33444433100 111234555566667777888888999998863
No 373
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=1.5e-17 Score=167.31 Aligned_cols=69 Identities=16% Similarity=0.192 Sum_probs=50.0
Q ss_pred cCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCC
Q 003134 290 TKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESS 369 (845)
Q Consensus 290 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p 369 (845)
++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N----------------------------- 136 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN----------------------------- 136 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS-----------------------------
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCC-----------------------------
Confidence 333444444555666777778888888888666667777887777777777
Q ss_pred CCCCCCCCCceeeeeecCC
Q 003134 370 DPIECPRGSVNLVESYSSP 388 (845)
Q Consensus 370 ~~~~c~~~~~~~l~~l~~~ 388 (845)
+|.|+|...++..|+...
T Consensus 137 -~~~C~c~l~~l~~~~~~~ 154 (193)
T 2wfh_A 137 -PLYCDCNMQWLSDWVKSE 154 (193)
T ss_dssp -CEECSGGGHHHHHHHHHS
T ss_pred -CeecCCcCHHHHHHHHhc
Confidence 777999999999998653
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3e-17 Score=164.82 Aligned_cols=132 Identities=19% Similarity=0.267 Sum_probs=85.7
Q ss_pred EEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCccc-ccccccccceeEeecc
Q 003134 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPK-VLTNITTLKNLSIEGN 173 (845)
Q Consensus 95 ~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N 173 (845)
+.+++++++++ .+|..+.. +|++|+|++|+|++ ..+. .|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~-----------------------~~~~~~~~~l~~L~~L~Ls~N 64 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGR-----------------------ISSDGLFGRLPHLVKLELKRN 64 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCS-----------------------BCCSCSGGGCTTCCEEECCSS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCc-----------------------cCCccccccCCCCCEEECCCC
Confidence 35666666664 45554432 55555555555544 3333 3666667777777777
Q ss_pred cCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 174 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+
T Consensus 65 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 65 QLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 7776666667777777777777777776666667777777777777777777667777777777777777777765543
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.3e-17 Score=167.43 Aligned_cols=130 Identities=18% Similarity=0.276 Sum_probs=112.9
Q ss_pred eEEEecCCCCCCCcccccccccccceeEeecccCCCCCCc-ccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeec
Q 003134 142 VELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPP-DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISD 220 (845)
Q Consensus 142 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 220 (845)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45566666664 45554433 899999999999977665 489999999999999999999899999999999999999
Q ss_pred CcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCC
Q 003134 221 NNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSES 274 (845)
Q Consensus 221 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~ 274 (845)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 999999999999999999999999999999999999999999998888877643
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=1.1e-16 Score=156.93 Aligned_cols=131 Identities=24% Similarity=0.250 Sum_probs=73.4
Q ss_pred eeEEEecCCCCC-CCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEee
Q 003134 141 LVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRIS 219 (845)
Q Consensus 141 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 219 (845)
|+.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+.++++|++|+|+
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 333344444443 34455555566666666666666543 455566666666666666665555555556666666666
Q ss_pred cCcCcccC-chhhcCCcccceEEecCCcCCCCcc---hhhhcCCCCCEEEcCCCCCCC
Q 003134 220 DNNFSGKI-PEFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRISDLKGSE 273 (845)
Q Consensus 220 ~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~n~~~~ 273 (845)
+|+|++.. +..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 66665432 1455666666666666666665444 355666666666555555443
No 377
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.69 E-value=6.1e-18 Score=199.80 Aligned_cols=296 Identities=16% Similarity=0.126 Sum_probs=186.6
Q ss_pred ceEEEEEecCC-Ccccc-CCccccCCCCCCEEeccCCcccCCCcccccc----c-ceeEEEecCCC--CCCC-ccccccc
Q 003134 92 CHVVTIALKAQ-NLTGT-LPTELSKLRYLKQLDLSRNCLTGSFSPQWAS----L-QLVELSVMGNR--LSGP-FPKVLTN 161 (845)
Q Consensus 92 ~~v~~L~l~~~-~l~g~-~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~----l-~L~~L~Ls~N~--l~~~-~p~~~~~ 161 (845)
.+++.|+|.+| .++.. ++..+.++++|++|+|++|.+++..+..+.. + +|++|+|++|. ++.. ++..+.+
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~ 209 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTR 209 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHh
Confidence 46888999888 55543 4444557889999999999888766554442 2 78888888876 2211 1122234
Q ss_pred ccccceeEeecc--------------------------------------------------cCCCC----CCcccccCC
Q 003134 162 ITTLKNLSIEGN--------------------------------------------------LFTGS----IPPDIRKLI 187 (845)
Q Consensus 162 l~~L~~L~Ls~N--------------------------------------------------~l~g~----~p~~~~~l~ 187 (845)
+++|++|+|++| .+... ++..+..++
T Consensus 210 ~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~ 289 (594)
T 2p1m_B 210 CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCS 289 (594)
T ss_dssp CTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHT
T ss_pred CCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhC
Confidence 577777777766 11111 222233578
Q ss_pred CccEEEeecCcCcccCCh-hhhCCCCCCcEEeecCcCccc-CchhhcCCcccceEEec---------CCcCCCCcchhhh
Q 003134 188 NLQKLILSSNSFTGELPA-ELTKLTNLNDLRISDNNFSGK-IPEFIGKWKKIQKLHIQ---------GSSLEGPIPASIS 256 (845)
Q Consensus 188 ~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls---------~N~l~g~~p~~~~ 256 (845)
+|++|+|++|.+++.... .+.++++|++|++++| ++.. ++.....+++|++|+|+ .|.+++.....+.
T Consensus 290 ~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~ 368 (594)
T 2p1m_B 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368 (594)
T ss_dssp TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHH
T ss_pred CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHH
Confidence 999999999998754433 3568899999999988 4422 33333457888888883 3566544444443
Q ss_pred -cCCCCCEEEcCCCCCCCCCCcccc--cCCccEEEcc--C----CcCccc-----CcccccCCCCcCEEeCCCCCCCCCC
Q 003134 257 -ALTSLTDLRISDLKGSESAFPKLD--KMNLKTLILT--K----CLIHGE-----IPDYIGDMTKLKNIDLSFNNLTGGI 322 (845)
Q Consensus 257 -~l~~L~~L~Ls~n~~~~~~~~~l~--~~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~g~~ 322 (845)
++++|+.|.++.|.++......+. ..+|+.|+|+ + |.++.. ++..+..+++|+.|+|++ ++++..
T Consensus 369 ~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 478888888877777665444432 2378888888 3 555522 222356677888888876 666555
Q ss_pred chhhhc-CCCcCEEEccCCcccCCCChhh---hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCC
Q 003134 323 PTTFEK-LAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKL 392 (845)
Q Consensus 323 p~~~~~-l~~L~~L~L~~N~l~g~ip~~~---~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~ 392 (845)
+..+.. +++|+.|+|++|.+++..+..+ ..+|+.|+|++|.+++.....+. ..+..++.++.+.++.
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~---~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANA---SKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTG---GGGGGSSEEEEESSCC
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHH---HhCCCCCEEeeeCCCC
Confidence 555555 7788888888888766554444 35788888888877543322121 1123455555555555
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.3e-16 Score=156.22 Aligned_cols=133 Identities=21% Similarity=0.169 Sum_probs=109.6
Q ss_pred CCCCCEEeccCCccc-CCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEE
Q 003134 115 LRYLKQLDLSRNCLT-GSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKL 192 (845)
Q Consensus 115 L~~L~~L~Ls~N~l~-~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 192 (845)
.++|++|+|++|+++ +.+|..+..+ +|++|+|++|+|++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 6667777777 788888888888866 778888999999999999997788888889999999
Q ss_pred EeecCcCcccC-ChhhhCCCCCCcEEeecCcCcccCc---hhhcCCcccceEEecCCcCCC
Q 003134 193 ILSSNSFTGEL-PAELTKLTNLNDLRISDNNFSGKIP---EFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 193 ~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~g 249 (845)
+|++|+|++.. +..+..+++|++|+|++|.+++..+ ..+..+++|++|++++|.+..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999998643 2678889999999999999986655 478889999999999998873
No 379
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.68 E-value=6.4e-18 Score=199.66 Aligned_cols=295 Identities=17% Similarity=0.162 Sum_probs=209.5
Q ss_pred ceEEEEEecCCCccccCCcccc-CCCCCCEEeccCC-cccCC-Cccccccc-ceeEEEecCCCCCCCcccccc----ccc
Q 003134 92 CHVVTIALKAQNLTGTLPTELS-KLRYLKQLDLSRN-CLTGS-FSPQWASL-QLVELSVMGNRLSGPFPKVLT----NIT 163 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~-~L~~L~~L~Ls~N-~l~~~-~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~----~l~ 163 (845)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+..+ +|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3688999999999988777776 7999999999999 55543 33333355 899999999999876655554 567
Q ss_pred ccceeEeecccCCCCCC-ccc----ccCCCccEEEeecCc----------------------------------------
Q 003134 164 TLKNLSIEGNLFTGSIP-PDI----RKLINLQKLILSSNS---------------------------------------- 198 (845)
Q Consensus 164 ~L~~L~Ls~N~l~g~~p-~~~----~~l~~L~~L~Ls~N~---------------------------------------- 198 (845)
+|++|+|++|. . .+. ..+ .++++|++|+|++|.
T Consensus 185 ~L~~L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~ 262 (594)
T 2p1m_B 185 SLVSLNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALS 262 (594)
T ss_dssp CCCEEECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHH
T ss_pred cCcEEEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHh
Confidence 99999999997 2 222 222 456889999998871
Q ss_pred ----------Ccc----cCChhhhCCCCCCcEEeecCcCcccCc-hhhcCCcccceEEecCCcCCC-CcchhhhcCCCCC
Q 003134 199 ----------FTG----ELPAELTKLTNLNDLRISDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEG-PIPASISALTSLT 262 (845)
Q Consensus 199 ----------l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~ 262 (845)
+.. .++..+..+++|++|+|++|.+++... ..+..+++|++|++++| +.. .++.....+++|+
T Consensus 263 ~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~ 341 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLR 341 (594)
T ss_dssp TCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCC
T ss_pred cCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCC
Confidence 111 122223357899999999999885433 34678999999999998 442 2333445689999
Q ss_pred EEEcCC---------CCCCCCCCcccc--cCCccEEEccCCcCcccCccccc-CCCCcCEEeCC--C----CCCCCCC--
Q 003134 263 DLRISD---------LKGSESAFPKLD--KMNLKTLILTKCLIHGEIPDYIG-DMTKLKNIDLS--F----NNLTGGI-- 322 (845)
Q Consensus 263 ~L~Ls~---------n~~~~~~~~~l~--~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~g~~-- 322 (845)
.|++++ +.++......+. ..+|+.|.++.|.+++..+..+. .+++|+.|+|+ + |++++..
T Consensus 342 ~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~ 421 (594)
T 2p1m_B 342 ELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLD 421 (594)
T ss_dssp EEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTH
T ss_pred EEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchh
Confidence 999943 444433322222 24899999999999987777765 58999999999 4 6777332
Q ss_pred ---chhhhcCCCcCEEEccCCcccCCCChhh---hcCCceEEeecCCCcCCCCCCCCCCCCCceeeeeecCCCCCCC
Q 003134 323 ---PTTFEKLAKTNFMYLTGNKLTGPVPKYI---FNSNKNVDISLNNFTWESSDPIECPRGSVNLVESYSSPRNKLD 393 (845)
Q Consensus 323 ---p~~~~~l~~L~~L~L~~N~l~g~ip~~~---~~~l~~L~ls~N~l~~~~p~~~~c~~~~~~~l~~l~~~~n~~~ 393 (845)
+..+..+++|+.|+|++ .+++..+..+ ..+|+.|+|++|.+++.....+... ...++.++.+.|+++
T Consensus 422 ~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~---~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 422 IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSG---CDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHH---CTTCCEEEEESCSCC
T ss_pred hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhc---CCCcCEEECcCCCCc
Confidence 22377899999999987 6776555554 3579999999999875433222111 233666777777774
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=9.4e-17 Score=154.00 Aligned_cols=127 Identities=25% Similarity=0.263 Sum_probs=96.5
Q ss_pred ceeEEEecCCCCC-CCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEe
Q 003134 140 QLVELSVMGNRLS-GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRI 218 (845)
Q Consensus 140 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 218 (845)
+|+.|++++|+++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 4666666666666 56677777788888888888888755 66778888888888888888767777777888888888
Q ss_pred ecCcCccc-CchhhcCCcccceEEecCCcCCCCcc---hhhhcCCCCCEEEcCC
Q 003134 219 SDNNFSGK-IPEFIGKWKKIQKLHIQGSSLEGPIP---ASISALTSLTDLRISD 268 (845)
Q Consensus 219 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~g~~p---~~~~~l~~L~~L~Ls~ 268 (845)
++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888763 34778888888888888888887665 5778888888887653
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=1.4e-16 Score=152.71 Aligned_cols=127 Identities=22% Similarity=0.212 Sum_probs=88.3
Q ss_pred CCCCEEeccCCccc-CCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEE
Q 003134 116 RYLKQLDLSRNCLT-GSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLI 193 (845)
Q Consensus 116 ~~L~~L~Ls~N~l~-~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 193 (845)
++|+.|++++|.++ +.+|..+..+ +|++|+|++|+|++. ..+.++++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45556666666665 4555555555 566666666666654 5677777888888888888766777777778888888
Q ss_pred eecCcCccc-CChhhhCCCCCCcEEeecCcCcccCc---hhhcCCcccceEEecC
Q 003134 194 LSSNSFTGE-LPAELTKLTNLNDLRISDNNFSGKIP---EFIGKWKKIQKLHIQG 244 (845)
Q Consensus 194 Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 244 (845)
|++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888887753 34667778888888888888876555 4677788888887753
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=9.2e-16 Score=151.66 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=72.4
Q ss_pred EEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeeccc
Q 003134 95 VTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL 174 (845)
Q Consensus 95 ~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 174 (845)
+.+++++++++. +|..+ .++|++|+|++|++++..+ ..|.++++|++|+|++|+
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~-----------------------~~~~~l~~L~~L~l~~n~ 63 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPH-----------------------GVFDKLTQLTKLSLSQNQ 63 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCT-----------------------TTTTTCTTCSEEECCSSC
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCH-----------------------HHhcCcccccEEECCCCc
Confidence 456677777663 44333 2466666666666554444 444555555555555555
Q ss_pred CCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcc
Q 003134 175 FTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIP 252 (845)
Q Consensus 175 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 252 (845)
|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|++.+..|
T Consensus 64 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 64 IQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 554444445555555555555555554444445555555555555555554444445555556666666665555443
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=153.55 Aligned_cols=128 Identities=21% Similarity=0.214 Sum_probs=87.2
Q ss_pred CEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCc
Q 003134 119 KQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS 198 (845)
Q Consensus 119 ~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 198 (845)
+++++++|+++.++. .+. .+|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~-~~~-~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPK-GIP-RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCS-CCC-TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCC-CCC-CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 578888888875432 221 26777777777776 455667777777777777777776666667777777777777777
Q ss_pred CcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCC
Q 003134 199 FTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 199 l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 776666667777777777777777775555566666677777777666653
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=7.9e-16 Score=152.12 Aligned_cols=113 Identities=20% Similarity=0.258 Sum_probs=74.0
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEee
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIE 171 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 171 (845)
.+++.|++++|.+++..+..|..+++|++|+|++|+|++..+..| .++++|++|+|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----------------------~~l~~L~~L~l~ 84 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF-----------------------DKLTKLTILYLH 84 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT-----------------------TTCTTCCEEECC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc-----------------------cCCCccCEEECC
Confidence 578999999999998777788999999999999988886554444 445555555555
Q ss_pred cccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccC
Q 003134 172 GNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKI 227 (845)
Q Consensus 172 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 227 (845)
+|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|.+++..
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 55555444444555555555555555555444444455555555666666555443
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=4.9e-16 Score=169.71 Aligned_cols=243 Identities=15% Similarity=0.115 Sum_probs=144.0
Q ss_pred ceEEEEEecCCCccccCCccccC-CCCCCEEeccCCccc--CCCcccccccceeEEEecCCCCCCCccccccc-------
Q 003134 92 CHVVTIALKAQNLTGTLPTELSK-LRYLKQLDLSRNCLT--GSFSPQWASLQLVELSVMGNRLSGPFPKVLTN------- 161 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~-L~~L~~L~Ls~N~l~--~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~------- 161 (845)
.+++.|.++++ +.+.--..+.. +++|++|||++|+|+ ...+..+.. +..+.+..|.| .+..|.+
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~--~~~~~~~~~~I---~~~aF~~~~~~~~~ 98 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPN--GKFYIYMANFV---PAYAFSNVVNGVTK 98 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGG--GCCEEECTTEE---CTTTTEEEETTEEE
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccc--ccccccccccc---CHHHhccccccccc
Confidence 35677777653 22111122334 889999999999998 333333322 34444444432 2345555
Q ss_pred -ccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcC----cccCchhhcCC--
Q 003134 162 -ITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNF----SGKIPEFIGKW-- 234 (845)
Q Consensus 162 -l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l----~~~~p~~~~~l-- 234 (845)
+++|+.|+|.+ +++...+..|.++++|++|+|++|.++...+.+|.++.++..+.+..+.. .......|.++
T Consensus 99 g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~ 177 (329)
T 3sb4_A 99 GKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEP 177 (329)
T ss_dssp ECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCC
T ss_pred ccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccc
Confidence 89999999988 88866667888999999999999988867777788777776666554221 11112222222
Q ss_pred ------------------------cccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEc
Q 003134 235 ------------------------KKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLIL 289 (845)
Q Consensus 235 ------------------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~L 289 (845)
.+++.+.+.++-...........+++|+.|+|++|++..++...+... +|+.|+|
T Consensus 178 L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 178 LETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp CEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred cceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 223333333331111111111235666666666666666555555554 6666666
Q ss_pred cCCcCcccCcccccCCCCcC-EEeCCCCCCCCCCchhhhcCCCcCEEEccCCccc
Q 003134 290 TKCLIHGEIPDYIGDMTKLK-NIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 290 s~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
.+| ++.+.+.+|.++++|+ .|+|.+ +++.+.+.+|.++++|+.|++++|+++
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~ 310 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT 310 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC
Confidence 666 6656666666777776 777766 566555666777777777777666666
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=7.9e-16 Score=168.99 Aligned_cols=147 Identities=11% Similarity=0.114 Sum_probs=105.8
Q ss_pred HHHHHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccc--------------cchHH--------HHHHHHHH
Q 003134 669 RQIKAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSR--------------QGNRE--------FVNEIGMI 726 (845)
Q Consensus 669 ~~l~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l 726 (845)
..+.....-|.+.+.||+|++|.||+|...+|+.||||+++.... ..... ..+|...|
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL 167 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFM 167 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 333333344888999999999999999998999999998754210 00111 23466677
Q ss_pred hcCCCCceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCC
Q 003134 727 SAQQHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDI 806 (845)
Q Consensus 727 ~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ivHrDL 806 (845)
.++.+.++....-+.... .+|||||++|++|.++.. ......++.|++.+|.|||+.+ ||||||
T Consensus 168 ~rL~~~gv~vp~p~~~~~--~~LVME~i~G~~L~~l~~-----------~~~~~~l~~qll~~l~~lH~~g---IVHrDL 231 (397)
T 4gyi_A 168 KALYEEGFPVPEPIAQSR--HTIVMSLVDALPMRQVSS-----------VPDPASLYADLIALILRLAKHG---LIHGDF 231 (397)
T ss_dssp HHHHHTTCSCCCEEEEET--TEEEEECCSCEEGGGCCC-----------CSCHHHHHHHHHHHHHHHHHTT---EECSCC
T ss_pred HHHHhcCCCCCeeeeccC--ceEEEEecCCccHhhhcc-----------cHHHHHHHHHHHHHHHHHHHCC---CcCCCC
Confidence 776555443222222222 279999999988865532 1235678899999999999987 999999
Q ss_pred CCCCEEecCCC----------cEEEEeeccceecC
Q 003134 807 KTSNVLLDKDL----------NAKISDFGLAKLYE 831 (845)
Q Consensus 807 Kp~NILld~~~----------~~kl~DFGla~~~~ 831 (845)
||.|||+++++ .+.|+||+-+....
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 99999998776 38999999887654
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=5.9e-16 Score=169.11 Aligned_cols=249 Identities=14% Similarity=0.068 Sum_probs=177.8
Q ss_pred CCCCCEEeccCCcccCCCcccccc-c-ceeEEEecCCCCC--CCcccccccccccceeEeecccCCCCCCccccc-----
Q 003134 115 LRYLKQLDLSRNCLTGSFSPQWAS-L-QLVELSVMGNRLS--GPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRK----- 185 (845)
Q Consensus 115 L~~L~~L~Ls~N~l~~~~~~~~~~-l-~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~----- 185 (845)
+++|+.|.++++ +....-..+.. + +|+.|||++|+|. ...+..+ +.++.+.+..|.|. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhccccccc
Confidence 678899999875 22221222333 3 7999999999988 3333233 33566666666543 456777
Q ss_pred ---CCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCc----CCCCcchhhhcC
Q 003134 186 ---LINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSS----LEGPIPASISAL 258 (845)
Q Consensus 186 ---l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~----l~g~~p~~~~~l 258 (845)
+++|++|+|.+ +++...+.+|.++++|+.|+|++|.++...+.+|.++.++..+.+..+. ........|.++
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 99999999999 8887777789999999999999999988888889888888777766532 222334455556
Q ss_pred CCCC-EEEcCCCC------------------------CCCCCCccc--ccCCccEEEccCCcCcccCcccccCCCCcCEE
Q 003134 259 TSLT-DLRISDLK------------------------GSESAFPKL--DKMNLKTLILTKCLIHGEIPDYIGDMTKLKNI 311 (845)
Q Consensus 259 ~~L~-~L~Ls~n~------------------------~~~~~~~~l--~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 311 (845)
.+|+ .+.+.... +.......+ ...+|+.|+|++|+++.+.+.+|.++++|+.|
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 6655 33332111 000000000 12489999999999998888899999999999
Q ss_pred eCCCCCCCCCCchhhhcCCCcC-EEEccCCcccCCCChhhh--cCCceEEeecCCCcCCCCCCCC
Q 003134 312 DLSFNNLTGGIPTTFEKLAKTN-FMYLTGNKLTGPVPKYIF--NSNKNVDISLNNFTWESSDPIE 373 (845)
Q Consensus 312 ~Ls~N~l~g~~p~~~~~l~~L~-~L~L~~N~l~g~ip~~~~--~~l~~L~ls~N~l~~~~p~~~~ 373 (845)
+|++| ++.+.+.+|.++++|+ .|++.+ +++..-+..+. .+|+.|++++|+++...+..|.
T Consensus 256 ~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 256 KLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred ECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 99998 8878888999999999 999998 77743344443 3789999999999988887773
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=3.4e-17 Score=165.25 Aligned_cols=149 Identities=21% Similarity=0.294 Sum_probs=101.1
Q ss_pred ccCCCCCCEEeccCCcccCCCcc------ccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccc
Q 003134 112 LSKLRYLKQLDLSRNCLTGSFSP------QWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIR 184 (845)
Q Consensus 112 l~~L~~L~~L~Ls~N~l~~~~~~------~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 184 (845)
+.....++.++++.|.+++..|. .+..+ +|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666666554 55555 66666666666665 44 6777777777777777777 5666666
Q ss_pred cCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCc-hhhcCCcccceEEecCCcCCCCcch----------
Q 003134 185 KLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIP-EFIGKWKKIQKLHIQGSSLEGPIPA---------- 253 (845)
Q Consensus 185 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~---------- 253 (845)
.+++|++|+|++|++++ +| .+.++++|++|+|++|+|++..+ ..+..+++|++|++++|++++.+|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 67777777777777775 34 56777777777777777774332 4677777777777777777766554
Q ss_pred hhhcCCCCCEEE
Q 003134 254 SISALTSLTDLR 265 (845)
Q Consensus 254 ~~~~l~~L~~L~ 265 (845)
.+..+++|+.||
T Consensus 169 ~~~~l~~L~~Ld 180 (198)
T 1ds9_A 169 VVKRLPNLKKLD 180 (198)
T ss_dssp HHHHCSSCSEEC
T ss_pred HHHhCCCcEEEC
Confidence 267777777775
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=3e-17 Score=165.68 Aligned_cols=155 Identities=21% Similarity=0.276 Sum_probs=91.8
Q ss_pred cccccccceeEeecccCCCCCCc------ccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhc
Q 003134 159 LTNITTLKNLSIEGNLFTGSIPP------DIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIG 232 (845)
Q Consensus 159 ~~~l~~L~~L~Ls~N~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 232 (845)
+.....++.++|+.|.++|.+|. .|..+++|++|+|++|++++ +| .+.++++|++|+|++|+|+ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666666555 66666666666666666664 45 5666666666666666666 4555566
Q ss_pred CCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCc-ccccCCCCcCEE
Q 003134 233 KWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIP-DYIGDMTKLKNI 311 (845)
Q Consensus 233 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 311 (845)
.+++|++|+|++|++++ +| .+..+++|+.| +|++|+|++..+ ..+..+++|++|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L-----------------------~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVL-----------------------YMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEE-----------------------EESEEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEE-----------------------ECCCCcCCchhHHHHHhcCCCCCEE
Confidence 66666666666666664 23 35444444444 333334433222 345666677777
Q ss_pred eCCCCCCCCCCch----------hhhcCCCcCEEEccCCccc
Q 003134 312 DLSFNNLTGGIPT----------TFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 312 ~Ls~N~l~g~~p~----------~~~~l~~L~~L~L~~N~l~ 343 (845)
++++|++++.+|. .+..+++|+.|| +|.++
T Consensus 146 ~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 146 LLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777776655443 266777777765 56555
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.9e-15 Score=149.33 Aligned_cols=133 Identities=23% Similarity=0.208 Sum_probs=72.0
Q ss_pred cccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCc
Q 003134 111 ELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINL 189 (845)
Q Consensus 111 ~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 189 (845)
.+.++++|++|+|++|+++.. |...... +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666777777777766643 3322222 555666666655543 455555566666666666554333333555556
Q ss_pred cEEEeecCcCcccCCh--hhhCCCCCCcEEeecCcCcccCch----hhcCCcccceEEecCCcCC
Q 003134 190 QKLILSSNSFTGELPA--ELTKLTNLNDLRISDNNFSGKIPE----FIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 190 ~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~ 248 (845)
++|+|++|+|+ .+|. .+..+++|++|+|++|.++ .+|. .+..+++|++|++++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 66666666554 3333 4555555555555555555 2333 2555555555555555543
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=2.9e-14 Score=159.67 Aligned_cols=223 Identities=11% Similarity=0.075 Sum_probs=118.4
Q ss_pred ccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCCCc
Q 003134 110 TELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINL 189 (845)
Q Consensus 110 ~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 189 (845)
.+|.+. +|+.++|..| ++.+...+|.+.+|+.+.|.. .++.+.+..|.++++|+.++|++|+++......|. ..+|
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hhcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 345553 5666666544 555555666666666666653 55555555666666666666666666633333343 4666
Q ss_pred cEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCC
Q 003134 190 QKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDL 269 (845)
Q Consensus 190 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n 269 (845)
+.+.|..| ++.....+|.++++|+.++|.+| ++.+-..+|.+ .+|+.+.| .|.++.....+|.++++|+.+++.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCc
Confidence 66666533 55444555666666666666654 44444555555 56666666 34455445566666666666666555
Q ss_pred CCC-----CCCCcccccC-CccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCccc
Q 003134 270 KGS-----ESAFPKLDKM-NLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 270 ~~~-----~~~~~~l~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
... ......+... +|+.++|. |.++.+...+|.++++|+.|+|.+| ++.+.+.+|.++ +|+.|++++|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 443 1122222222 45555554 2344444444555555555555332 443344445555 5555555555443
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=8.6e-15 Score=144.60 Aligned_cols=131 Identities=15% Similarity=0.182 Sum_probs=107.7
Q ss_pred cccc-ceeEEEecCCCCCCCccccccccc-ccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCC
Q 003134 136 WASL-QLVELSVMGNRLSGPFPKVLTNIT-TLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNL 213 (845)
Q Consensus 136 ~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 213 (845)
+..+ +|+.|+|++|+|+.. |. +..+. +|++|+|++|+|++. ..|..+++|++|+|++|+|++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3444 899999999999954 54 55554 999999999999965 678999999999999999997655666899999
Q ss_pred CcEEeecCcCcccCch--hhcCCcccceEEecCCcCCCCcch----hhhcCCCCCEEEcCCCCCC
Q 003134 214 NDLRISDNNFSGKIPE--FIGKWKKIQKLHIQGSSLEGPIPA----SISALTSLTDLRISDLKGS 272 (845)
Q Consensus 214 ~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~n~~~ 272 (845)
++|+|++|+|+ .+|. .+..+++|++|++++|+++. +|. .+..+++|+.|++++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999999997 5665 78899999999999999984 454 4888998888888777653
No 393
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.53 E-value=7.8e-14 Score=156.19 Aligned_cols=241 Identities=7% Similarity=0.073 Sum_probs=201.6
Q ss_pred ceEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEe
Q 003134 92 CHVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSI 170 (845)
Q Consensus 92 ~~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 170 (845)
++++.+.+..+ ++.+-..+|.+. +|+.++|.. .++.+.+.+|..+ +|+.++|++|+++.+....|. .++|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 45777777655 776666778884 799999985 7888888999998 899999999999977777777 589999999
Q ss_pred ecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC--
Q 003134 171 EGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE-- 248 (845)
Q Consensus 171 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-- 248 (845)
..| ++......|.++++|+.++|..| ++..-..+|.+ .+|+.+.| .|.++.+...+|.++++|+.+.+.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 854 77667778999999999999986 66566677887 89999999 56677777899999999999999998876
Q ss_pred ---CCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCch
Q 003134 249 ---GPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPT 324 (845)
Q Consensus 249 ---g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 324 (845)
...+.+|.++++|+.++|.+ .+..+....+.. .+|+.+.|..| ++.+.+.+|.++ +|+.|++++|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 45678999999999999984 477666666766 48999999655 887888999999 999999999999987888
Q ss_pred hhhcCC-CcCEEEccCCccc
Q 003134 325 TFEKLA-KTNFMYLTGNKLT 343 (845)
Q Consensus 325 ~~~~l~-~L~~L~L~~N~l~ 343 (845)
.|.+++ +++.|++..|.+.
T Consensus 364 ~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCCSCTTCCEEEECGGGHH
T ss_pred cccCCCCCccEEEeCHHHHH
Confidence 898885 7889999888665
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=2.1e-14 Score=141.06 Aligned_cols=50 Identities=18% Similarity=0.233 Sum_probs=31.8
Q ss_pred CCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCC
Q 003134 291 KCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340 (845)
Q Consensus 291 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 340 (845)
+|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 63 ~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 112 (170)
T 3g39_A 63 NNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCC
Confidence 33333344445566667777777777777666666777777777776666
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=9.9e-14 Score=136.21 Aligned_cols=87 Identities=23% Similarity=0.263 Sum_probs=45.6
Q ss_pred cccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEe
Q 003134 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242 (845)
Q Consensus 163 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 242 (845)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 44555555555555444555555555555555555555444444455555555555555555444444555555555555
Q ss_pred cCCcCCC
Q 003134 243 QGSSLEG 249 (845)
Q Consensus 243 s~N~l~g 249 (845)
++|+++.
T Consensus 110 ~~N~~~c 116 (170)
T 3g39_A 110 LNNPWDC 116 (170)
T ss_dssp CSSCBCT
T ss_pred CCCCCCC
Confidence 5555543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2e-13 Score=134.56 Aligned_cols=86 Identities=24% Similarity=0.324 Sum_probs=40.8
Q ss_pred cccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEe
Q 003134 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHI 242 (845)
Q Consensus 163 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 242 (845)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 34444444444444444444444444444444444444433333444455555555555554433334444555555555
Q ss_pred cCCcCC
Q 003134 243 QGSSLE 248 (845)
Q Consensus 243 s~N~l~ 248 (845)
++|++.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 555544
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.9e-13 Score=132.46 Aligned_cols=105 Identities=20% Similarity=0.280 Sum_probs=91.3
Q ss_pred cceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecC
Q 003134 165 LKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQG 244 (845)
Q Consensus 165 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 244 (845)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 468899999997 6777664 7999999999999988899999999999999999999987777789999999999999
Q ss_pred CcCCCCcchhhhcCCCCCEEEcCCCCCC
Q 003134 245 SSLEGPIPASISALTSLTDLRISDLKGS 272 (845)
Q Consensus 245 N~l~g~~p~~~~~l~~L~~L~Ls~n~~~ 272 (845)
|+|++..+..|..+++|+.|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 9999877777888888888877766654
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5.7e-13 Score=146.33 Aligned_cols=70 Identities=24% Similarity=0.233 Sum_probs=39.1
Q ss_pred CCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCCcCCCCC
Q 003134 291 KCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNFTWESSD 370 (845)
Q Consensus 291 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l~~~~p~ 370 (845)
+|+|++..|..|.++++|+.|||++|+|++..+..|..++ |+.|+|++ |
T Consensus 65 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~----------------------N-------- 113 (347)
T 2ifg_A 65 KSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSG----------------------N-------- 113 (347)
T ss_dssp SSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCS----------------------S--------
T ss_pred CCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeC----------------------C--------
Confidence 3333344444455555555555555555544444444443 44444444 4
Q ss_pred CCCCCCCCceeeeeecCCCCC
Q 003134 371 PIECPRGSVNLVESYSSPRNK 391 (845)
Q Consensus 371 ~~~c~~~~~~~l~~l~~~~n~ 391 (845)
+|.|+|...++..|+......
T Consensus 114 ~~~c~c~l~~~~~~~~~~~~~ 134 (347)
T 2ifg_A 114 PLHCSCALRWLQRWEEEGLGG 134 (347)
T ss_dssp CCCCCGGGHHHHHHHHTTCSS
T ss_pred CccCCCccHHHHHHHHhCccc
Confidence 666888888888887665444
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.35 E-value=3.2e-14 Score=157.73 Aligned_cols=156 Identities=18% Similarity=0.185 Sum_probs=87.2
Q ss_pred CCCCEEeccCCcccCCCccccccc------ceeEEEecCCCCCCCcccccc-cccccceeEeecccCCCCCCcccc----
Q 003134 116 RYLKQLDLSRNCLTGSFSPQWASL------QLVELSVMGNRLSGPFPKVLT-NITTLKNLSIEGNLFTGSIPPDIR---- 184 (845)
Q Consensus 116 ~~L~~L~Ls~N~l~~~~~~~~~~l------~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~---- 184 (845)
++|+.|+|++|.|+......+... +|++|+|++|+|+......+. .+++|+.|+|++|+|+......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 567777887777765443333222 577777777776644333332 356677777777776643333332
Q ss_pred -cCCCccEEEeecCcCcc----cCChhhhCCCCCCcEEeecCcCccc----CchhhcCCcccceEEecCCcCCCC----c
Q 003134 185 -KLINLQKLILSSNSFTG----ELPAELTKLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHIQGSSLEGP----I 251 (845)
Q Consensus 185 -~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~ 251 (845)
..++|++|+|++|+|+. .++..+..+++|++|+|++|+|+.. ++..+...++|++|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 34567777777777653 2333445666677777777766632 234455556666666666666542 2
Q ss_pred chhhhcCCCCCEEEcCCCCC
Q 003134 252 PASISALTSLTDLRISDLKG 271 (845)
Q Consensus 252 p~~~~~l~~L~~L~Ls~n~~ 271 (845)
+..+...++|+.|+|++|.+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSC
T ss_pred HHHHHhCCCCCEEeccCCCC
Confidence 23333444444444444433
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=6e-14 Score=155.60 Aligned_cols=110 Identities=18% Similarity=0.244 Sum_probs=66.6
Q ss_pred ceeEEEecCCCCCCCcccccccc-----cccceeEeecccCCCCCCccc-ccCCCccEEEeecCcCcccCChhh-----h
Q 003134 140 QLVELSVMGNRLSGPFPKVLTNI-----TTLKNLSIEGNLFTGSIPPDI-RKLINLQKLILSSNSFTGELPAEL-----T 208 (845)
Q Consensus 140 ~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~-----~ 208 (845)
.|+.|+|++|.|+......+..+ ++|++|+|++|.|+......+ ..+++|++|+|++|+|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 57778888888775544444433 577777777777764322222 235667777777777764433333 2
Q ss_pred CCCCCCcEEeecCcCccc----CchhhcCCcccceEEecCCcCCC
Q 003134 209 KLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 209 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
..++|++|+|++|+|+.. ++..+...++|++|+|++|+|+.
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCc
Confidence 346677777777777632 33344556666666666666653
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.30 E-value=8.5e-12 Score=131.19 Aligned_cols=148 Identities=15% Similarity=0.083 Sum_probs=115.9
Q ss_pred HHHhcCCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCCEEEEE
Q 003134 672 KAATNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 672 ~~~~~~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV 750 (845)
...-..|.....++.|+.+.||++... ++.+++|............+.+|+++++.+. |..++++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 334456877778888888999999754 6789999987542233456888999998884 67788999999999999999
Q ss_pred EeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 003134 751 YEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED---------------------------------- 796 (845)
Q Consensus 751 ~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------------------------------- 796 (845)
|||++|.+|.+.+. +......++.+++++|..||+.
T Consensus 89 ~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 89 MSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999877631 1123457889999999999981
Q ss_pred ----------------------CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 797 ----------------------SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 797 ----------------------~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
.++.++|+|++|.||+++++..+.|+||+.|...
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~g 214 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA 214 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcccC
Confidence 1134999999999999987666789999988653
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=3.2e-12 Score=140.29 Aligned_cols=102 Identities=20% Similarity=0.222 Sum_probs=65.3
Q ss_pred EecCC-CCCCCcccccccccccceeEeec-ccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCc
Q 003134 145 SVMGN-RLSGPFPKVLTNITTLKNLSIEG-NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN 222 (845)
Q Consensus 145 ~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 222 (845)
+++++ +|++ +|. |..+++|++|+|++ |+|++..+..|.+|++|++|+|++|+|++..|..|.+|++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4443 455 66666677777764 66766555666677777777777777776666666777777777777777
Q ss_pred CcccCchhhcCCcccceEEecCCcCCC
Q 003134 223 FSGKIPEFIGKWKKIQKLHIQGSSLEG 249 (845)
Q Consensus 223 l~~~~p~~~~~l~~L~~L~Ls~N~l~g 249 (845)
|++..+..|..++ |++|+|++|.|..
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 7655555555554 6667777666653
No 403
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.26 E-value=8.9e-12 Score=122.40 Aligned_cols=117 Identities=23% Similarity=0.315 Sum_probs=93.5
Q ss_pred cchhhhhhccccCCCCCceEEeecCCceEEEEEeeeeeEEcCCccccccccEEEEEEeccccccccCccccccCCCCCce
Q 003134 482 AVDLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGGTGIPI 561 (845)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~ 561 (845)
..++++|++||.++.+++|++.+..+|.|.|||||||+.++ ..++|+|+||||...+.++||+..++++ .+|+
T Consensus 51 ~~~~~lY~TaR~~~~~~tY~f~v~~~G~Y~VrLhF~ei~~~------~~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~ 123 (174)
T 2jwp_A 51 PEDQVLYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFA------QSQQKVFDVRVNGHTVVKDLDIFDRVGH-STAH 123 (174)
T ss_dssp HHHHHTTTCCCCCCSCEEEEEECCSCEEEEEEEEEECCSCC------CSSSSCEEEEETTEEEEEEECHHHHHSS-SSCE
T ss_pred CCCchhhhhhccCCCCeEEEEEeCCCeEEEEEEEEeccccC------CCCCeEeEEEECCEEeecCcCHHHhhCC-CeeE
Confidence 45788999999999999999999999999999999998754 3799999999999999999999988876 7899
Q ss_pred EeeeeeeeecceeEEEEeec-CCceeeecCC--CCCCCCcccccccc
Q 003134 562 VKNFPAEVTSHTLKIHLYWA-GRGTTGIPLR--GTYGPLISAISVKS 605 (845)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~p~~~~~~~~~ 605 (845)
.+.|.+.+.+..+++|..++ +.|...+... ..+.|.++++.+.+
T Consensus 124 ~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 124 DEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYYDNPKVCALFIMK 170 (174)
T ss_dssp EEEEEEEEETTEEEETTEEEECCSEEEEEEECSSSCSSSEEEEEEES
T ss_pred EEEEEEEEecCceeeeeeecccCCeEEEEEeccCCCCcEEEEEEEEe
Confidence 99999998887777665543 4444444321 13457777666543
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.11 E-value=5e-11 Score=124.68 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=99.1
Q ss_pred cccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCc--eeeEEEEEEeCCEEEEEEeccCCCChhhh
Q 003134 685 GEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEGNQLLLVYEYMKNNCLSRA 762 (845)
Q Consensus 685 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lV~Ey~~~gsL~~~ 762 (845)
+.|..+.||++...+|+.+++|..... ....+..|+++++.+.+.+ +++++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998777888999997653 2345778999988885544 567899888888899999999998884
Q ss_pred hhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 003134 763 IFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS--------------------------------------------- 797 (845)
Q Consensus 763 l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--------------------------------------------- 797 (845)
... . ....++.++++.|..||+..
T Consensus 104 ~~~--------~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 SSH--------L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp TSC--------C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred cCc--------C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 1 12367778888888888642
Q ss_pred ----------CCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 798 ----------RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 798 ----------~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
+..++|+|++|.||+++++..++|+|||.|...
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999987766789999998765
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=1.9e-10 Score=126.50 Aligned_cols=204 Identities=17% Similarity=0.155 Sum_probs=116.8
Q ss_pred ceeEEEecCCCCCC-C-------cccccccccccceeEeecccCC---------CCCCcccccCCCccEEEeecCcCccc
Q 003134 140 QLVELSVMGNRLSG-P-------FPKVLTNITTLKNLSIEGNLFT---------GSIPPDIRKLINLQKLILSSNSFTGE 202 (845)
Q Consensus 140 ~L~~L~Ls~N~l~~-~-------~p~~~~~l~~L~~L~Ls~N~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~g~ 202 (845)
+++.|.+......| . +..++..+++|+.|.+..+... +.++..+..+++|++|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 56777777666543 1 1334556788888888765432 123334455667777777666211 1
Q ss_pred CChhhhCCCCCCcEEeecCcCcccCchhhc--CCcccceEEecC--CcCCCCc-chhhhcCCCCCEEEcCCCCCCCCCCc
Q 003134 203 LPAELTKLTNLNDLRISDNNFSGKIPEFIG--KWKKIQKLHIQG--SSLEGPI-PASISALTSLTDLRISDLKGSESAFP 277 (845)
Q Consensus 203 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~g~~-p~~~~~l~~L~~L~Ls~n~~~~~~~~ 277 (845)
++. + .+++|++|+|..|.++......+. .+++|++|+|+. |...+.. ...+..+ ..
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~-----------------l~ 247 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL-----------------FS 247 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG-----------------SC
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH-----------------Hh
Confidence 222 2 256666666666666543333333 456666666542 2211110 0000000 00
Q ss_pred ccccCCccEEEccCCcCcccCccccc---CCCCcCEEeCCCCCCCCC----CchhhhcCCCcCEEEccCCcccCCCChhh
Q 003134 278 KLDKMNLKTLILTKCLIHGEIPDYIG---DMTKLKNIDLSFNNLTGG----IPTTFEKLAKTNFMYLTGNKLTGPVPKYI 350 (845)
Q Consensus 278 ~l~~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~g~ip~~~ 350 (845)
.-...+|+.|+|++|.+....+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.++...-..+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 00112678888888888765444433 578999999999999864 33444678999999999998875444444
Q ss_pred hc-CCceEEeecCC
Q 003134 351 FN-SNKNVDISLNN 363 (845)
Q Consensus 351 ~~-~l~~L~ls~N~ 363 (845)
.. ....++++.|+
T Consensus 328 ~~alg~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKSLPMKIDVSDSQ 341 (362)
T ss_dssp HHHCCSEEECCSBC
T ss_pred HHHcCCEEEecCCc
Confidence 43 23668888885
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.02 E-value=2.8e-09 Score=118.98 Aligned_cols=259 Identities=12% Similarity=0.062 Sum_probs=124.8
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCC---------------------C
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGN---------------------R 150 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N---------------------~ 150 (845)
.++.+.+.. +++.+-..+|.++++|+.++|..+ ++.+...+|... +|+.+.+..+ .
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~ 149 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEG 149 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCcc
Confidence 455666642 355444456666777777776543 444444444444 3433333211 1
Q ss_pred CCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchh
Q 003134 151 LSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEF 230 (845)
Q Consensus 151 l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (845)
+......+|.++++|+.+.|.++..+ .....|.++.+|+.+++..| ++......|.++..|+.+.+.++... +.+.
T Consensus 150 ~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~ 225 (394)
T 4fs7_A 150 VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDF 225 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTT
T ss_pred ccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehh
Confidence 11112234445555555555443222 33334555555555555444 33233334445555554444433221 1111
Q ss_pred hcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCC--------------------Ccc-cccCCccEEEc
Q 003134 231 IGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESA--------------------FPK-LDKMNLKTLIL 289 (845)
Q Consensus 231 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~--------------------~~~-l~~~~L~~L~L 289 (845)
+....+|+.+.+..+ ++......|.++.+|+.+.+..+...... ... ....+|+.+.+
T Consensus 226 ~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l 304 (394)
T 4fs7_A 226 ALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKL 304 (394)
T ss_dssp TTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEE
T ss_pred hcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeecccccccccccccccc
Confidence 112223333333221 11122334455555555555443221100 011 11226777777
Q ss_pred cCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhh---cCCceEEeecC
Q 003134 290 TKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLN 362 (845)
Q Consensus 290 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N 362 (845)
..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+++..| ++ .|+...| .+|+.+++..|
T Consensus 305 ~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 305 LDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred ccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 544 66566667777778888877644 66555667777778887777666 55 3443332 25677777655
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=1.7e-10 Score=126.93 Aligned_cols=37 Identities=11% Similarity=0.028 Sum_probs=23.5
Q ss_pred cceEEEEEecCCCccc-c-------CCccccCCCCCCEEeccCCc
Q 003134 91 TCHVVTIALKAQNLTG-T-------LPTELSKLRYLKQLDLSRNC 127 (845)
Q Consensus 91 ~~~v~~L~l~~~~l~g-~-------~p~~l~~L~~L~~L~Ls~N~ 127 (845)
.++|+.|.+......| . +..++..+++|+.|.+..+.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~ 150 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDID 150 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcc
Confidence 4567777777655542 1 23345667889999887653
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.96 E-value=8.9e-10 Score=121.41 Aligned_cols=142 Identities=15% Similarity=0.236 Sum_probs=106.8
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcC--ccc-ccchHHHHHHHHHHhcCC--CCceeeEEEEEEeC---CEEEEEEe
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLS--SKS-RQGNREFVNEIGMISAQQ--HPNLVKLYGCCVEG---NQLLLVYE 752 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~---~~~~lV~E 752 (845)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 5678999999999998754 578888876 332 123456788999998886 45688899988766 45899999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS----------------------------------- 797 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~----------------------------------- 797 (845)
|++|..+.+.. ...++..++..++.++++.|..||...
T Consensus 122 ~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 122 FVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp CCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred ecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 99998775422 124678888999999999999999831
Q ss_pred --------------------CCCeEeCCCCCCCEEecCCCc--EEEEeeccceec
Q 003134 798 --------------------RIKIVHRDIKTSNVLLDKDLN--AKISDFGLAKLY 830 (845)
Q Consensus 798 --------------------~~~ivHrDLKp~NILld~~~~--~kl~DFGla~~~ 830 (845)
+..++|+|+++.|||++.++. +.|+||+.|..-
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246999999999999997753 689999998753
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.86 E-value=4.4e-08 Score=109.27 Aligned_cols=246 Identities=13% Similarity=0.139 Sum_probs=123.2
Q ss_pred CccccCCCCCCEEeccCCc---ccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccc
Q 003134 109 PTELSKLRYLKQLDLSRNC---LTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIR 184 (845)
Q Consensus 109 p~~l~~L~~L~~L~Ls~N~---l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~ 184 (845)
..+|.++++|+.+.++.|. ++.+...+|... +|+.+.+..+ ++.+....|.++.+|+.+.+..+. .......|.
T Consensus 80 ~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~ 157 (394)
T 4gt6_A 80 SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFS 157 (394)
T ss_dssp TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTT
T ss_pred HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccccccee-eeeccccee
Confidence 3455566666666665542 444444455444 4444444322 333334455555555555554332 223334455
Q ss_pred cCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcC-----------------
Q 003134 185 KLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSL----------------- 247 (845)
Q Consensus 185 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----------------- 247 (845)
.+.+|+.+.+..+ ++..-..+|.+ .+|+.+.+..+-.. ....+|..+.+|.......+..
T Consensus 158 ~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (394)
T 4gt6_A 158 YCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYA 234 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEE
T ss_pred cccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccccccceeeccccccccc
Confidence 5555555555443 23222233332 34555555433222 3334444444444443322211
Q ss_pred -------------------CCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcccCcccccCCCCc
Q 003134 248 -------------------EGPIPASISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHGEIPDYIGDMTKL 308 (845)
Q Consensus 248 -------------------~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 308 (845)
+..-..+|.++.+|+.+.+.++.............+|+.+.+. +.++.+...+|.++.+|
T Consensus 235 ~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L 313 (394)
T 4gt6_A 235 LIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISL 313 (394)
T ss_dssp EEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTC
T ss_pred ccccccccccceEEcCCcceEcccceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCc
Confidence 1112335666667777766544322111111222367777774 45665666667777777
Q ss_pred CEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhh---cCCceEEeecCC
Q 003134 309 KNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNN 363 (845)
Q Consensus 309 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~ 363 (845)
+.++|..| ++.+...+|.++.+|+.+.|..+ ++ .|....| .+|+.+++.+|.
T Consensus 314 ~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 314 KSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCH
T ss_pred CEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCce
Confidence 77777654 55455567777777777777544 54 4444433 257777777663
No 410
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.79 E-value=4.1e-08 Score=109.56 Aligned_cols=220 Identities=13% Similarity=0.129 Sum_probs=163.2
Q ss_pred CccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCcccccccccccceeEeecccCCCCCCcccccCC
Q 003134 109 PTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLI 187 (845)
Q Consensus 109 p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 187 (845)
..+|.++++|+.+.|..+ ++.+...+|... +|+.+++..| ++.+....|.++..|+.+.+..+... +.+.+....
T Consensus 155 ~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 456788888888888654 455666677776 7888887765 55555667888888888877766543 233444557
Q ss_pred CccEEEeecCcCcccCChhhhCCCCCCcEEeecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcC
Q 003134 188 NLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRIS 267 (845)
Q Consensus 188 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 267 (845)
+|+.+.+..+ ++......|.++.+|+.+.+..+..+ .....|..+..++.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccc
Confidence 7888888654 34344566888889999998887655 66778888888888888776543 4578888999999887
Q ss_pred CCCCCCCCCccccc-CCccEEEccCCcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCC
Q 003134 268 DLKGSESAFPKLDK-MNLKTLILTKCLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGN 340 (845)
Q Consensus 268 ~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N 340 (845)
++ +..+....+.. .+|+.++|..+ ++.+...+|.++++|+.++|..| ++.....+|.++++|+.+++..|
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred cc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 64 44444455554 48999999754 77777889999999999999887 77677789999999999999765
No 411
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.72 E-value=1.4e-07 Score=105.19 Aligned_cols=258 Identities=10% Similarity=0.099 Sum_probs=170.9
Q ss_pred eEEEEEecCC---CccccCCccccCCCCCCEEeccCCcccCCCccccccc-ceeEEEecCCCCCCCccccccccccccee
Q 003134 93 HVVTIALKAQ---NLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASL-QLVELSVMGNRLSGPFPKVLTNITTLKNL 168 (845)
Q Consensus 93 ~v~~L~l~~~---~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 168 (845)
.++.+.+..+ .++..-..+|.++.+|+.+.+..+ ++.+...+|... +|+.+.+..+ +..+....|..+.+|+.+
T Consensus 88 ~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i 165 (394)
T 4gt6_A 88 SLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTV 165 (394)
T ss_dssp TCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred cCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccc
Confidence 4556666543 255444567888888888888654 666666777777 7888888643 444556678888888888
Q ss_pred EeecccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCc--------------------------
Q 003134 169 SIEGNLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNN-------------------------- 222 (845)
Q Consensus 169 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-------------------------- 222 (845)
.+..+ ++..-...|. ..+|+.+.+..+-.. ....+|.++.+|+......+.
T Consensus 166 ~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (394)
T 4gt6_A 166 TLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQR 242 (394)
T ss_dssp ECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTC
T ss_pred cccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceecccccccccccceeeccccccccccccccccc
Confidence 88765 4423334454 356777777655332 444556666666555443322
Q ss_pred ----------CcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccC
Q 003134 223 ----------FSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTK 291 (845)
Q Consensus 223 ----------l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~ 291 (845)
++..-..+|.++.+|+.+.+..+..+ ....+|.++.+|+.+.+.. .+.......+.. .+|+.++|..
T Consensus 243 ~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~ 320 (394)
T 4gt6_A 243 EDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPE 320 (394)
T ss_dssp CCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCT
T ss_pred ccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCC
Confidence 22233456788889999998766543 5567889999999999863 455555555555 3899999976
Q ss_pred CcCcccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhh--hcCCceEEeecC
Q 003134 292 CLIHGEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYI--FNSNKNVDISLN 362 (845)
Q Consensus 292 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~--~~~l~~L~ls~N 362 (845)
+ ++.+...+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++.+|.... ..+ ...|+.+.+..|
T Consensus 321 ~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 321 G-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred c-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 5 77777889999999999999765 776777899999999999999986542 122 235677766655
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.58 E-value=1.1e-09 Score=114.60 Aligned_cols=104 Identities=23% Similarity=0.268 Sum_probs=64.5
Q ss_pred cccccccce--eEeecccCCCCCCc----ccccCCCccEEEeecCcCcc--cCChhhhCCCCCCcEEeecCcCcccCchh
Q 003134 159 LTNITTLKN--LSIEGNLFTGSIPP----DIRKLINLQKLILSSNSFTG--ELPAELTKLTNLNDLRISDNNFSGKIPEF 230 (845)
Q Consensus 159 ~~~l~~L~~--L~Ls~N~l~g~~p~----~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 230 (845)
|...+.|+. ++++.|+.. .++. ...++++|++|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hh
Confidence 444445554 556666433 2222 22456777777777777776 4456666777777777777777754 23
Q ss_pred hcCCc--ccceEEecCCcCCCCcc-------hhhhcCCCCCEEE
Q 003134 231 IGKWK--KIQKLHIQGSSLEGPIP-------ASISALTSLTDLR 265 (845)
Q Consensus 231 ~~~l~--~L~~L~Ls~N~l~g~~p-------~~~~~l~~L~~L~ 265 (845)
+..+. +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 34444 77778888888776554 3467788888875
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.55 E-value=2e-07 Score=100.76 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=103.4
Q ss_pred CCCCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCC----CceeeEEEEEEeCCEEEEEEe
Q 003134 677 NFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH----PNLVKLYGCCVEGNQLLLVYE 752 (845)
Q Consensus 677 ~y~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~lV~E 752 (845)
.....+.++.|....||+. +..+++|+.... .....+.+|.+++..+.+ ..+++++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5556778999999999998 667888876432 223568899998888865 234556655 55689999
Q ss_pred ccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCC----------------------------------
Q 003134 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSR---------------------------------- 798 (845)
Q Consensus 753 y~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~---------------------------------- 798 (845)
|++|.++..... ..++..++..++.++++.|..||+...
T Consensus 108 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 108 YIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp CCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 999998864331 135677778888888888888885432
Q ss_pred --------------------------CCeEeCCCCCCCEEecCCCcEEEEeeccceecC
Q 003134 799 --------------------------IKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (845)
Q Consensus 799 --------------------------~~ivHrDLKp~NILld~~~~~kl~DFGla~~~~ 831 (845)
+.++|+|++|.||+++.+..+.|+||+.|....
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999987667999999987543
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.55 E-value=1e-06 Score=97.46 Aligned_cols=267 Identities=13% Similarity=0.116 Sum_probs=167.3
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeec
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 172 (845)
+++.+.+. .+++.+-..+|.++++|+.++|.. .++.+...+|...+|+.+.+..+ +..+...+|.. .+|+.+.+..
T Consensus 47 ~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~ 122 (379)
T 4h09_A 47 RISEVRVN-SGITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADTKLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPG 122 (379)
T ss_dssp GCSEEEEC-TTEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTCCCCEEEECTT-CCEECTTTTTT-CCCSEEECCT
T ss_pred CCEEEEeC-CCccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCCCCceEECCce-eeEeccceecc-CCcccccCCC
Confidence 45666664 456655567899999999999975 47877788888888888877643 55444555655 4788888876
Q ss_pred ccCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecCcC-----------------------------
Q 003134 173 NLFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDNNF----------------------------- 223 (845)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l----------------------------- 223 (845)
+-.. .....|.+ .+|+.+.+..+ ++......|.++.+|+.+.+..+..
T Consensus 123 ~~~~-i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 4h09_A 123 ATTE-IGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEF 199 (379)
T ss_dssp TCCE-ECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEE
T ss_pred cccc-cccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccc
Confidence 5322 22233333 24555554433 2323344455555555544433221
Q ss_pred ------cccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCcccccC-CccEEEccCCcCcc
Q 003134 224 ------SGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDKM-NLKTLILTKCLIHG 296 (845)
Q Consensus 224 ------~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~-~L~~L~Ls~N~l~~ 296 (845)
+......+....+|+.+.+..+ +......+|.++.+|+.+.+..+ +.......+... +|+.+.+..+ ++.
T Consensus 200 ~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~ 276 (379)
T 4h09_A 200 TIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKT 276 (379)
T ss_dssp ECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSE
T ss_pred ccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-cee
Confidence 1122345556677888877654 44455667788888888888654 333333333333 6888888543 665
Q ss_pred cCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhh---cCCceEEeecCCCcCCCCCCC
Q 003134 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIF---NSNKNVDISLNNFTWESSDPI 372 (845)
Q Consensus 297 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~---~~l~~L~ls~N~l~~~~p~~~ 372 (845)
.....|.++++|+.+++.+|.++.+...+|.++.+|+.+.|..+ ++ .|...-| .+|+.+++..+ ++......|
T Consensus 277 i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 277 VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECCc-cCEEchhHh
Confidence 66677888899999999888888667788888899999888755 55 4444433 25777777544 443333333
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.51 E-value=1.4e-08 Score=106.18 Aligned_cols=96 Identities=26% Similarity=0.384 Sum_probs=71.3
Q ss_pred EEecCCCCC---CCcccccccccccceeEeecccCCC--CCCcccccCCCccEEEeecCcCcccCChhhhCCC--CCCcE
Q 003134 144 LSVMGNRLS---GPFPKVLTNITTLKNLSIEGNLFTG--SIPPDIRKLINLQKLILSSNSFTGELPAELTKLT--NLNDL 216 (845)
Q Consensus 144 L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L 216 (845)
++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 677777533 2222233567899999999999997 4567778899999999999999865 3344444 89999
Q ss_pred EeecCcCcccCc-------hhhcCCcccceEE
Q 003134 217 RISDNNFSGKIP-------EFIGKWKKIQKLH 241 (845)
Q Consensus 217 ~Ls~N~l~~~~p-------~~~~~l~~L~~L~ 241 (845)
+|++|.+++.+| ..+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 999999987665 3467788888876
No 416
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.49 E-value=1.3e-07 Score=101.45 Aligned_cols=137 Identities=18% Similarity=0.216 Sum_probs=101.0
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCc--eeeEEEEEEeCC---EEEEEEecc
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPN--LVKLYGCCVEGN---QLLLVYEYM 754 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lV~Ey~ 754 (845)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +++++.+....+ ..|+||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 45888886532 23467889999998773 332 455555543333 348899999
Q ss_pred CCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC--------------------------------------
Q 003134 755 KNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED-------------------------------------- 796 (845)
Q Consensus 755 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-------------------------------------- 796 (845)
+|.++.+... ..++..++..++.++++.|..||+.
T Consensus 99 ~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 99 KGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred CCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 9988865432 2467778888999999999999862
Q ss_pred -----------------CCCCeEeCCCCCCCEEecC--CCcEEEEeeccceec
Q 003134 797 -----------------SRIKIVHRDIKTSNVLLDK--DLNAKISDFGLAKLY 830 (845)
Q Consensus 797 -----------------~~~~ivHrDLKp~NILld~--~~~~kl~DFGla~~~ 830 (845)
.++.++|+|++|.||++++ +..+.|+||+.+..-
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1245899999999999998 456899999998765
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=7.6e-07 Score=94.66 Aligned_cols=144 Identities=20% Similarity=0.197 Sum_probs=95.3
Q ss_pred CCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCC---ceeeEEEEEEeCCEEEEEEeccCC
Q 003134 680 PANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCVEGNQLLLVYEYMKN 756 (845)
Q Consensus 680 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lV~Ey~~~ 756 (845)
..+.|+.|.++.||++...+|+.+++|+...........|..|++.|+.+.+. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999888999999997544333456889999999999775 578888763 35899999999
Q ss_pred CChhh-----------hhhcCCcc-cc---------------cCCCHHHHH---HH-----------------HHHHHHH
Q 003134 757 NCLSR-----------AIFGKDTE-YR---------------LKLDWPTRK---KI-----------------CIGIARG 789 (845)
Q Consensus 757 gsL~~-----------~l~~~~~~-~~---------------~~l~~~~~~---~i-----------------~~~ia~a 789 (845)
+.+.. .+|..... .. ..-+|.+.. ++ ...+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87531 22322110 00 001333211 00 1111222
Q ss_pred HHHHH----hCCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 790 LAYLH----EDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 790 L~yLH----~~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
++.+. ...++.++|+|+.+.||+++. +.+.|+|| .+..
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~~ 216 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAHG 216 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCEE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcCC
Confidence 23332 233567999999999999987 45889999 6653
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=5.7e-08 Score=96.28 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=43.2
Q ss_pred cccccccceeEeecc-cCCCC----CCcccccCCCccEEEeecCcCccc----CChhhhCCCCCCcEEeecCcCccc---
Q 003134 159 LTNITTLKNLSIEGN-LFTGS----IPPDIRKLINLQKLILSSNSFTGE----LPAELTKLTNLNDLRISDNNFSGK--- 226 (845)
Q Consensus 159 ~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~--- 226 (845)
+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|+|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 334455555555555 54421 112233445555555555555421 222333445556666666655532
Q ss_pred -CchhhcCCcccceEEe--cCCcCC
Q 003134 227 -IPEFIGKWKKIQKLHI--QGSSLE 248 (845)
Q Consensus 227 -~p~~~~~l~~L~~L~L--s~N~l~ 248 (845)
+...+...++|++|+| ++|.|.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHhCCCceEEEecCCCCCCC
Confidence 2334444455555555 555554
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.40 E-value=1.2e-06 Score=94.17 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=97.3
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCC---ceeeEEEEEE-eCCEEEEEEeccCC
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP---NLVKLYGCCV-EGNQLLLVYEYMKN 756 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lV~Ey~~~ 756 (845)
.+.++.|....||+. +..+++|+... ......+..|.++|..+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456788888899987 56678887532 22346788999999998653 3677777775 34567899999999
Q ss_pred CChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhC----------------------------------------
Q 003134 757 NCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHED---------------------------------------- 796 (845)
Q Consensus 757 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------------------------------------- 796 (845)
..+.+.... .++..++..++.++++.|..||+.
T Consensus 98 ~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 98 QILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp EECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred eECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 888663211 234455555666666666665543
Q ss_pred -----------------CCCCeEeCCCCCCCEEecC---CCc-EEEEeeccceecC
Q 003134 797 -----------------SRIKIVHRDIKTSNVLLDK---DLN-AKISDFGLAKLYE 831 (845)
Q Consensus 797 -----------------~~~~ivHrDLKp~NILld~---~~~-~kl~DFGla~~~~ 831 (845)
.++.++|+|++|.||+++. ++. +.|+||+.+..-.
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd 226 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD 226 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence 2335799999999999987 455 5899999887653
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.34 E-value=1.6e-06 Score=90.99 Aligned_cols=136 Identities=13% Similarity=0.095 Sum_probs=98.2
Q ss_pred cccccCcE-EEEEEEEC-CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCCEEEEEEeccCCCCh
Q 003134 683 KVGEGGFG-SVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVYEYMKNNCL 759 (845)
Q Consensus 683 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL 759 (845)
.+..|..+ .||+.... ++..+++|+-... ...++.+|.+.|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455554 68988765 4667888876433 3456788999888763 33477899999999999999999999888
Q ss_pred hhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------
Q 003134 760 SRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDS------------------------------------------ 797 (845)
Q Consensus 760 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------------------------------------------ 797 (845)
.+.... .......++.++++.|.-||...
T Consensus 108 ~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 108 FQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred cccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 765422 12234456666777777776421
Q ss_pred -------------CCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 798 -------------RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 798 -------------~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
++.++|+|+.+.|||+++++.+-|+||+.+...
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 113799999999999998777789999998754
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.34 E-value=1.2e-07 Score=93.96 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=72.7
Q ss_pred ChhhhCCCCCCcEEeecC-cCccc----CchhhcCCcccceEEecCCcCCCC----cchhhhcCCCCCEEEcCCCCCCCC
Q 003134 204 PAELTKLTNLNDLRISDN-NFSGK----IPEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSES 274 (845)
Q Consensus 204 p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~n~~~~~ 274 (845)
...+...++|++|+|++| +|... +...+...++|++|+|++|+|... +...+...++|+
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~------------ 96 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLK------------ 96 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCC------------
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcC------------
Confidence 344566778888888888 77632 334555567777777777777642 223333334444
Q ss_pred CCcccccCCccEEEccCCcCccc----CcccccCCCCcCEEeC--CCCCCCCC----CchhhhcCCCcCEEEccCCccc
Q 003134 275 AFPKLDKMNLKTLILTKCLIHGE----IPDYIGDMTKLKNIDL--SFNNLTGG----IPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 275 ~~~~l~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~g~----~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
+|+|++|.|... +...+...+.|++|+| ++|.|+.. +...+...+.|++|+|++|.+.
T Consensus 97 -----------~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 97 -----------SLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp -----------EEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred -----------EEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 445555555433 3445566677888888 77887743 2344555677888888888775
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.32 E-value=5.8e-07 Score=83.40 Aligned_cols=73 Identities=19% Similarity=0.171 Sum_probs=54.9
Q ss_pred EEEccCCcCc-ccCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCcccCCCChhhhcCCceEEeecCCC
Q 003134 286 TLILTKCLIH-GEIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLTGPVPKYIFNSNKNVDISLNNF 364 (845)
Q Consensus 286 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~~l~~L~ls~N~l 364 (845)
.++.+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N------------------------ 65 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGAN------------------------ 65 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSS------------------------
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCC------------------------
Confidence 5667777775 34554433 46888888888888777777788888877777766
Q ss_pred cCCCCCCCCCCCCCceeeeeecCCCC
Q 003134 365 TWESSDPIECPRGSVNLVESYSSPRN 390 (845)
Q Consensus 365 ~~~~p~~~~c~~~~~~~l~~l~~~~n 390 (845)
||.|+|...++..|+.....
T Consensus 66 ------P~~CdC~l~~l~~wl~~~~~ 85 (130)
T 3rfe_A 66 ------PWRCDCRLVPLRAWLAGRPE 85 (130)
T ss_dssp ------CCBCSGGGHHHHHHHHTSSC
T ss_pred ------CeeccCccHHHHHHHHhCcc
Confidence 89999999999999986543
No 423
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.28 E-value=1e-05 Score=89.27 Aligned_cols=240 Identities=14% Similarity=0.085 Sum_probs=157.4
Q ss_pred eEEEEEecCCCccccCCccccCCCCCCEEeccCCcccCCCcccccccceeEEEecCCCCCCCcccccccccccceeEeec
Q 003134 93 HVVTIALKAQNLTGTLPTELSKLRYLKQLDLSRNCLTGSFSPQWASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEG 172 (845)
Q Consensus 93 ~v~~L~l~~~~l~g~~p~~l~~L~~L~~L~Ls~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 172 (845)
.++.+.|.. +++.+-..+|.+. +|+.+.+.. .++.+...+|...+|+.+.+..+ +..+....|.+. +|+.+.+..
T Consensus 70 ~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~ 144 (379)
T 4h09_A 70 NMTKVTVAS-TVTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGTDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPK 144 (379)
T ss_dssp TCCEEEECT-TCCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTCCCSEEECCTT-CCEECTTTTTTC-CCCEEEECT
T ss_pred CCCEEEeCC-cceEechhhhcCC-CCceEECCc-eeeEeccceeccCCcccccCCCc-cccccccccccc-eeeeeeccc
Confidence 577777764 4665555667776 577777654 35555566666667777777644 222223333332 344444433
Q ss_pred ccCCCCCCcccccCCCccEEEeecCc-----------------------------------CcccCChhhhCCCCCCcEE
Q 003134 173 NLFTGSIPPDIRKLINLQKLILSSNS-----------------------------------FTGELPAELTKLTNLNDLR 217 (845)
Q Consensus 173 N~l~g~~p~~~~~l~~L~~L~Ls~N~-----------------------------------l~g~~p~~~~~l~~L~~L~ 217 (845)
+ ++......|..+.+|+.+.+..+. ........+....+|+.+.
T Consensus 145 ~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~ 223 (379)
T 4h09_A 145 S-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKIT 223 (379)
T ss_dssp T-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEE
T ss_pred e-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccccccceee
Confidence 2 222223344444444444443221 1113344566778889888
Q ss_pred eecCcCcccCchhhcCCcccceEEecCCcCCCCcchhhhcCCCCCEEEcCCCCCCCCCCccccc-CCccEEEccCCcCcc
Q 003134 218 ISDNNFSGKIPEFIGKWKKIQKLHIQGSSLEGPIPASISALTSLTDLRISDLKGSESAFPKLDK-MNLKTLILTKCLIHG 296 (845)
Q Consensus 218 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~l~~-~~L~~L~Ls~N~l~~ 296 (845)
+..+ ++......|.++.+|+.+.+..+ ++..-..+|.++.+|+.+.+..+ +.......+.. .+|+.+.+.++.++.
T Consensus 224 ~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~ 300 (379)
T 4h09_A 224 ITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIET 300 (379)
T ss_dssp CCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred eccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccce
Confidence 8665 55466778888999999999776 66566778889999999988654 44444444444 389999999999998
Q ss_pred cCcccccCCCCcCEEeCCCCCCCCCCchhhhcCCCcCEEEccCCccc
Q 003134 297 EIPDYIGDMTKLKNIDLSFNNLTGGIPTTFEKLAKTNFMYLTGNKLT 343 (845)
Q Consensus 297 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L~~N~l~ 343 (845)
+...+|.++.+|+.++|.++ ++.+...+|.++.+|+.+.+..+ ++
T Consensus 301 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 301 LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 88889999999999999765 77566788999999999988655 54
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=3.4e-06 Score=92.70 Aligned_cols=145 Identities=12% Similarity=0.120 Sum_probs=92.0
Q ss_pred CCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCc--eeeEEEEEEeC-CEEEEEEeccCC
Q 003134 680 PANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLYGCCVEG-NQLLLVYEYMKN 756 (845)
Q Consensus 680 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lV~Ey~~~ 756 (845)
..+.++.|....+|+... ++..+++|..... ..+..|..++..+.... +.++++++... +..|+||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356688899999999886 5788899987532 35888988888876533 56778777764 678999999998
Q ss_pred CChhhh------------------hhcCCcc-------cc-----cCCCHHHH---------------------HHHHHH
Q 003134 757 NCLSRA------------------IFGKDTE-------YR-----LKLDWPTR---------------------KKICIG 785 (845)
Q Consensus 757 gsL~~~------------------l~~~~~~-------~~-----~~l~~~~~---------------------~~i~~~ 785 (845)
.++.+. +|..... .. ..-+|.+. ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 766421 1111000 00 00011111 111122
Q ss_pred HHHHHHHHHhC-CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 786 IARGLAYLHED-SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 786 ia~aL~yLH~~-~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
+...++++... ..+.++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 199 ~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 199 LDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 22233333221 1246899999999999988777889999998764
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18 E-value=1.5e-06 Score=95.18 Aligned_cols=81 Identities=6% Similarity=0.009 Sum_probs=56.5
Q ss_pred CCcc-cccCcEEEEEEEEC-------CCcEEEEEEcCccc---ccchHHHHHHHHHHhcCCC---CceeeEEEEEEeC--
Q 003134 681 ANKV-GEGGFGSVYKGILS-------DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQH---PNLVKLYGCCVEG-- 744 (845)
Q Consensus 681 ~~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H---~nIv~l~~~~~~~-- 744 (845)
.+.| +.|....+|+.... +++.+++|...... ......+..|+++++.+.. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3556 78888999998764 26678899875432 1122456788888887742 3577888887654
Q ss_pred -CEEEEEEeccCCCChhh
Q 003134 745 -NQLLLVYEYMKNNCLSR 761 (845)
Q Consensus 745 -~~~~lV~Ey~~~gsL~~ 761 (845)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.96 E-value=1.8e-05 Score=85.72 Aligned_cols=143 Identities=15% Similarity=0.225 Sum_probs=81.6
Q ss_pred CcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCC--CceeeEEE------EEEeCCEEEEEEec
Q 003134 682 NKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--PNLVKLYG------CCVEGNQLLLVYEY 753 (845)
Q Consensus 682 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~------~~~~~~~~~lV~Ey 753 (845)
+.|+.|..+.||++...++ .+++|+.... ..++..|.+++..+.. -.+++++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3455667889999987655 4889988652 2334445555544421 12334433 12356788999999
Q ss_pred cCCCChh--------------hhhhcCCccc--c-------cCCCHHHH-------------------------------
Q 003134 754 MKNNCLS--------------RAIFGKDTEY--R-------LKLDWPTR------------------------------- 779 (845)
Q Consensus 754 ~~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~------------------------------- 779 (845)
++|..+. ..+|...... . ..-.|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9987542 1122110000 0 01122211
Q ss_pred HHHHHHHHHHHHHHHh----------CCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 780 KKICIGIARGLAYLHE----------DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 780 ~~i~~~ia~aL~yLH~----------~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
..+..++..++++|++ ..+..++|+|+++.|||++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 1111234456777763 1245699999999999998888999999998864
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=2.3e-05 Score=87.22 Aligned_cols=75 Identities=12% Similarity=0.147 Sum_probs=49.9
Q ss_pred CCcccccCcEEEEEEEEC-CCcEEEEEEcCcccc-------cchHHHHHHHHHHhcCCC---CceeeEEEEEEeCCEEEE
Q 003134 681 ANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSR-------QGNREFVNEIGMISAQQH---PNLVKLYGCCVEGNQLLL 749 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H---~nIv~l~~~~~~~~~~~l 749 (845)
.+.+|.|..+.||++... +++.+++|....... ....++..|.+++..+.. ..+++++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467899999999999754 467899997653211 123456778888887632 345566654 4455689
Q ss_pred EEeccCCC
Q 003134 750 VYEYMKNN 757 (845)
Q Consensus 750 V~Ey~~~g 757 (845)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00022 Score=76.34 Aligned_cols=140 Identities=14% Similarity=0.149 Sum_probs=92.9
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCC---CCceeeEEEEEEeCCEEEEEEeccCCC
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ---HPNLVKLYGCCVEGNQLLLVYEYMKNN 757 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lV~Ey~~~g 757 (845)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...++++++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45788999999999886 4667888886542 3567888998888773 367889999988888999999999988
Q ss_pred Chhh-----------hhhcCCc--ccc---------------cCCCHHHHH---HHHH----------------HHHH-H
Q 003134 758 CLSR-----------AIFGKDT--EYR---------------LKLDWPTRK---KICI----------------GIAR-G 789 (845)
Q Consensus 758 sL~~-----------~l~~~~~--~~~---------------~~l~~~~~~---~i~~----------------~ia~-a 789 (845)
.+.. .+|.... ... ..-+|.+.. ++.. .+.+ .
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 2333211 000 012454321 1111 1111 1
Q ss_pred HHHHHh-CCCCCeEeCCCCCCCEEecCCCcEEEEeec
Q 003134 790 LAYLHE-DSRIKIVHRDIKTSNVLLDKDLNAKISDFG 825 (845)
Q Consensus 790 L~yLH~-~~~~~ivHrDLKp~NILld~~~~~kl~DFG 825 (845)
.+.|.. ..++.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223322 2356799999999999999887 8899984
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.59 E-value=5.5e-05 Score=73.37 Aligned_cols=84 Identities=10% Similarity=0.127 Sum_probs=45.6
Q ss_pred cccceeEeecccCCCCCCcccccCCCccEEEeecCc-CcccCChhhhCC----CCCCcEEeecCc-CcccCchhhcCCcc
Q 003134 163 TTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSNS-FTGELPAELTKL----TNLNDLRISDNN-FSGKIPEFIGKWKK 236 (845)
Q Consensus 163 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 236 (845)
-+|+.|||+++.++..--..+..+++|++|+|+++. |+..--..++.+ ++|++|+|+++. +|..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356777777766664434445566666666666663 443322334443 246666666653 55333334455555
Q ss_pred cceEEecCCc
Q 003134 237 IQKLHIQGSS 246 (845)
Q Consensus 237 L~~L~Ls~N~ 246 (845)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 5555555543
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.57 E-value=3.9e-05 Score=74.42 Aligned_cols=88 Identities=10% Similarity=0.084 Sum_probs=67.6
Q ss_pred cccceeEEEecCCCCCCCcccccccccccceeEeeccc-CCCCCCcccccC----CCccEEEeecCc-CcccCChhhhCC
Q 003134 137 ASLQLVELSVMGNRLSGPFPKVLTNITTLKNLSIEGNL-FTGSIPPDIRKL----INLQKLILSSNS-FTGELPAELTKL 210 (845)
Q Consensus 137 ~~l~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~g~~p~~~~~l 210 (845)
...+|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..++.+ ++|++|+|+++. ++..--..+.++
T Consensus 59 ~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~ 138 (176)
T 3e4g_A 59 DKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHF 138 (176)
T ss_dssp TCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGC
T ss_pred CCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcC
Confidence 45589999999999887767778889999999999985 774333345554 369999999974 775444567889
Q ss_pred CCCCcEEeecCc-Cc
Q 003134 211 TNLNDLRISDNN-FS 224 (845)
Q Consensus 211 ~~L~~L~Ls~N~-l~ 224 (845)
++|++|+|+++. ++
T Consensus 139 ~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 139 RNLKYLFLSDLPGVK 153 (176)
T ss_dssp TTCCEEEEESCTTCC
T ss_pred CCCCEEECCCCCCCC
Confidence 999999999875 44
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.50 E-value=0.00024 Score=75.07 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=57.3
Q ss_pred CCCCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCC---CceeeEEEEEEeCCEEEEEEeccC
Q 003134 679 DPANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH---PNLVKLYGCCVEGNQLLLVYEYMK 755 (845)
Q Consensus 679 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~nIv~l~~~~~~~~~~~lV~Ey~~ 755 (845)
...+.+|.|..+.||+.+..+|+.|.+|+...........|..|.+.|+.+.- --+++++++ .. -++||||++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~l~ 93 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEECCC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEeec
Confidence 34667899999999999999999999998765544445678899998887732 234555554 23 378999998
Q ss_pred CCCh
Q 003134 756 NNCL 759 (845)
Q Consensus 756 ~gsL 759 (845)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7654
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.39 E-value=0.00031 Score=78.59 Aligned_cols=73 Identities=15% Similarity=0.166 Sum_probs=45.8
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcCcc------c-c--cchHHHHHHHHHHh-cCCCCceeeEEEEEEeCCEEEEE
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSK------S-R--QGNREFVNEIGMIS-AQQHPNLVKLYGCCVEGNQLLLV 750 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~------~-~--~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~lV 750 (845)
.+.+|.|..+.||++.. +++.++||..... . . .....+..|+..+. ...+..+++++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 46788999999999965 4678999943211 0 0 12233444443332 22334677777765 5667999
Q ss_pred Eecc-CC
Q 003134 751 YEYM-KN 756 (845)
Q Consensus 751 ~Ey~-~~ 756 (845)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.34 E-value=0.001 Score=71.31 Aligned_cols=161 Identities=13% Similarity=0.143 Sum_probs=89.1
Q ss_pred ccHHHHHHHhcCCCC-----CCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCc--eeeEE
Q 003134 666 YTLRQIKAATNNFDP-----ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN--LVKLY 738 (845)
Q Consensus 666 ~~~~~l~~~~~~y~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 738 (845)
++.+++...-..|.. .+.|+.|....+|+....++ .+++|..... ....++..|.+++..+.... +++++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344556555555654 23456687889999987655 5788988652 12234556777766653212 33333
Q ss_pred EE------EEeCCEEEEEEeccCCCChhh--------------hhhcCCcccccC-------CCHHHHHH----------
Q 003134 739 GC------CVEGNQLLLVYEYMKNNCLSR--------------AIFGKDTEYRLK-------LDWPTRKK---------- 781 (845)
Q Consensus 739 ~~------~~~~~~~~lV~Ey~~~gsL~~--------------~l~~~~~~~~~~-------l~~~~~~~---------- 781 (845)
.. ....+..++||||++|..+.. .+|........+ ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 223467899999999865421 122110000000 11222100
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 782 --ICIGIARGLAYLHED----SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 782 --i~~~ia~aL~yLH~~----~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
+...+.+.++++++. .+..++|+|+.+.|||++++..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244556666532 234699999999999999876668999998764
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.19 E-value=0.0023 Score=68.60 Aligned_cols=144 Identities=11% Similarity=0.033 Sum_probs=82.7
Q ss_pred cccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCC--ceeeEEEE-----EEeCCEEEEEEeccC
Q 003134 683 KVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHP--NLVKLYGC-----CVEGNQLLLVYEYMK 755 (845)
Q Consensus 683 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~lV~Ey~~ 755 (845)
.++ |....||+....+|+.+++|...... ....++..|.+++..+... .+++++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 455 77789999887677789999986431 2345667788877766322 24444442 223567789999998
Q ss_pred CCChhh--------------hhhcC----CcccccCCCHHHH----H---------------HHHHHHHHHHHHHHhC--
Q 003134 756 NNCLSR--------------AIFGK----DTEYRLKLDWPTR----K---------------KICIGIARGLAYLHED-- 796 (845)
Q Consensus 756 ~gsL~~--------------~l~~~----~~~~~~~l~~~~~----~---------------~i~~~ia~aL~yLH~~-- 796 (845)
|..+.. .+|.. ........++... . .+...+.+.++.+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 855321 01110 0000011222110 0 0111112223333321
Q ss_pred --CCCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 797 --SRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 797 --~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
.+..++|+|+++.|||++ + .+.|+||+.+..-
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 234589999999999999 5 8999999887643
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.08 E-value=0.0024 Score=68.80 Aligned_cols=144 Identities=15% Similarity=0.121 Sum_probs=74.0
Q ss_pred CcccccCcEE-EEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCC--CceeeEEEEEEeCCEEEEEEeccCCCC
Q 003134 682 NKVGEGGFGS-VYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQH--PNLVKLYGCCVEGNQLLLVYEYMKNNC 758 (845)
Q Consensus 682 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lV~Ey~~~gs 758 (845)
+.++.|.... +|+....++..+++|....... .++..|++++..+.. -.+++++.+....+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4455554444 6677654466777776544321 223445666555532 34566776643333 78999998777
Q ss_pred hhhhhhcCCc---------------------ccccCCCHHHHH--------------------HHHHHHHHHHHHHH---
Q 003134 759 LSRAIFGKDT---------------------EYRLKLDWPTRK--------------------KICIGIARGLAYLH--- 794 (845)
Q Consensus 759 L~~~l~~~~~---------------------~~~~~l~~~~~~--------------------~i~~~ia~aL~yLH--- 794 (845)
+.+.+.+... .....++..... .....+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 6554432110 000011111100 00011122233331
Q ss_pred hCCCCCeEeCCCCCCCEEecCC----CcEEEEeeccceec
Q 003134 795 EDSRIKIVHRDIKTSNVLLDKD----LNAKISDFGLAKLY 830 (845)
Q Consensus 795 ~~~~~~ivHrDLKp~NILld~~----~~~kl~DFGla~~~ 830 (845)
...+..++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1224569999999999999875 67999999988754
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.06 E-value=0.00088 Score=71.18 Aligned_cols=141 Identities=12% Similarity=0.145 Sum_probs=75.2
Q ss_pred CCcccccCcEEEEEEEECCCcEEEEEEcCcccccchHHHHHHHHHHhcCCCCce-eeEEEEEEeCCEEEEEEecc-CCCC
Q 003134 681 ANKVGEGGFGSVYKGILSDGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYM-KNNC 758 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~Ey~-~~gs 758 (845)
.+.|+.|....+|++ ..+++|+....... .....+|.++++.+....+ .+++++ ..+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 677888999999998 45788887653211 1122457776665532222 456554 343457899999 6544
Q ss_pred hhh------------------hhhcCCcccccCCCH-HHHHHHHH--------------HHHHHH----HHHHh-CCCCC
Q 003134 759 LSR------------------AIFGKDTEYRLKLDW-PTRKKICI--------------GIARGL----AYLHE-DSRIK 800 (845)
Q Consensus 759 L~~------------------~l~~~~~~~~~~l~~-~~~~~i~~--------------~ia~aL----~yLH~-~~~~~ 800 (845)
+.. .+|..........+. .....+.. .+.+.+ +.+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 421 112111100000111 11111100 011111 11111 22345
Q ss_pred eEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 801 IVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 801 ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
++|+|+.+.||+ ..++.+.++||..|..-
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 899999999999 56678899999988754
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.03 E-value=0.0011 Score=72.98 Aligned_cols=144 Identities=18% Similarity=0.234 Sum_probs=84.1
Q ss_pred CCcccccCcEEEEEEEEC--------CCcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCCEEEEEE
Q 003134 681 ANKVGEGGFGSVYKGILS--------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.+.+..|-...+|++... +++.+++|+.... ......+.+|.++++.+. +.-..++++++. + .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEE
Confidence 345666777889998864 2478999987442 233456678988887763 222356666553 3 2899
Q ss_pred eccCCCChhhh-----------------hhcCCcccccCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 003134 752 EYMKNNCLSRA-----------------IFGKDTEYRLKLD--WPTRKKICIGIAR-------------------GLAYL 793 (845)
Q Consensus 752 Ey~~~gsL~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia~-------------------aL~yL 793 (845)
||++|..|... +|........... |.++.++..++.. .+++|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665311 1222111111122 3455555443321 23333
Q ss_pred H----hC-CCCCeEeCCCCCCCEEecCC----CcEEEEeecccee
Q 003134 794 H----ED-SRIKIVHRDIKTSNVLLDKD----LNAKISDFGLAKL 829 (845)
Q Consensus 794 H----~~-~~~~ivHrDLKp~NILld~~----~~~kl~DFGla~~ 829 (845)
. .. .+..++|+|+.+.||+++.+ +.+.|+||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 22 23459999999999999876 7899999998874
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.03 E-value=0.00064 Score=76.25 Aligned_cols=73 Identities=18% Similarity=0.229 Sum_probs=49.5
Q ss_pred CCcccccCcEEEEEEEECC--------CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCce-eeEEEEEEeCCEEEEEE
Q 003134 681 ANKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~ 751 (845)
.+.|+.|-...+|++...+ +..+++|+.... .....+..|..++..+...++ +++++.+. + .+||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4567888889999998753 478899988432 112456678888887743333 56776543 3 3899
Q ss_pred eccCCCCh
Q 003134 752 EYMKNNCL 759 (845)
Q Consensus 752 Ey~~~gsL 759 (845)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987544
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=0.00029 Score=69.64 Aligned_cols=113 Identities=12% Similarity=0.106 Sum_probs=58.9
Q ss_pred hhCCCCCCcEEeecC-cCccc----CchhhcCCcccceEEecCCcCCCC----cchhhhcCCCCCEEEcCCCCCCCCCCc
Q 003134 207 LTKLTNLNDLRISDN-NFSGK----IPEFIGKWKKIQKLHIQGSSLEGP----IPASISALTSLTDLRISDLKGSESAFP 277 (845)
Q Consensus 207 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~n~~~~~~~~ 277 (845)
+.+-+.|++|+|++| +|... +-+.+..-+.|+.|+|++|+|... +...+..-+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~------------------ 98 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSP------------------ 98 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCS------------------
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCC------------------
Confidence 344466777777764 65421 233444555666666666666532 222222333
Q ss_pred ccccCCccEEEccCCcCcccC----cccccCCCCcCEEeCCCCCC---CC----CCchhhhcCCCcCEEEccCCcc
Q 003134 278 KLDKMNLKTLILTKCLIHGEI----PDYIGDMTKLKNIDLSFNNL---TG----GIPTTFEKLAKTNFMYLTGNKL 342 (845)
Q Consensus 278 ~l~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l---~g----~~p~~~~~l~~L~~L~L~~N~l 342 (845)
.|++|+|++|.|.... -..+..-+.|++|+|++|.. .. .+-..+..-+.|+.|+++.|.+
T Consensus 99 -----tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 99 -----SLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp -----SCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred -----ccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 4555555555555332 23344456677777775532 21 1223455556677777766644
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.92 E-value=0.00028 Score=69.67 Aligned_cols=116 Identities=14% Similarity=0.247 Sum_probs=75.6
Q ss_pred cccCCCccEEEeecC-cCccc----CChhhhCCCCCCcEEeecCcCccc----CchhhcCCcccceEEecCCcCCCCcch
Q 003134 183 IRKLINLQKLILSSN-SFTGE----LPAELTKLTNLNDLRISDNNFSGK----IPEFIGKWKKIQKLHIQGSSLEGPIPA 253 (845)
Q Consensus 183 ~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 253 (845)
+.+-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|... +-..+..-+.|++|+|++|.|...--.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345678999999986 77632 344566678999999999999843 334555668999999999999854333
Q ss_pred ----hhhcCCCCCEEEcCCCCCCCCCCcccccCCccEEEccCCcCcc----cCcccccCCCCcCEEeCCCCCC
Q 003134 254 ----SISALTSLTDLRISDLKGSESAFPKLDKMNLKTLILTKCLIHG----EIPDYIGDMTKLKNIDLSFNNL 318 (845)
Q Consensus 254 ----~~~~l~~L~~L~Ls~n~~~~~~~~~l~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 318 (845)
++..-+.|+.|+|+++... .+.. .+...+..-+.|+.|+|+.|.+
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~--------------------~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQS--------------------VLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSC--------------------CCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHhhCCceeEEECCCCcCc--------------------CcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3333445555555433210 2221 1334455567778888877654
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.86 E-value=0.0035 Score=70.68 Aligned_cols=74 Identities=15% Similarity=0.068 Sum_probs=47.4
Q ss_pred CCcccccCcEEEEEEEECC-CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCce-eeEEEEEEeCCEEEEEEeccCCCC
Q 003134 681 ANKVGEGGFGSVYKGILSD-GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNL-VKLYGCCVEGNQLLLVYEYMKNNC 758 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lV~Ey~~~gs 758 (845)
.+.|+.|-...+|++...+ +..+++|+....... ...-..|..++..+...++ +++++++ .+ .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence 4567888889999998865 478889987543211 1112478888887754444 5677766 33 25999999755
Q ss_pred h
Q 003134 759 L 759 (845)
Q Consensus 759 L 759 (845)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.59 E-value=0.0019 Score=59.46 Aligned_cols=37 Identities=14% Similarity=0.357 Sum_probs=19.4
Q ss_pred CCCcEEeecCcCcccCchhhcCCcccceEEecCCcCC
Q 003134 212 NLNDLRISDNNFSGKIPEFIGKWKKIQKLHIQGSSLE 248 (845)
Q Consensus 212 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 248 (845)
+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555444444555555555555555553
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.41 E-value=0.0034 Score=68.67 Aligned_cols=73 Identities=10% Similarity=0.101 Sum_probs=43.4
Q ss_pred CcccccCcEEEEEEEECC---------CcEEEEEEcCcccccchHHHHHHHHHHhcCCCCc-eeeEEEEEEeCCEEEEEE
Q 003134 682 NKVGEGGFGSVYKGILSD---------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPN-LVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 682 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lV~ 751 (845)
+.++.|....+|++...+ +..+++|+....... ......|.+++..+...+ ++++++.. .+ ++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEE
Confidence 456778778999998754 267888987653221 112356777777664333 44666543 33 6899
Q ss_pred eccCCCCh
Q 003134 752 EYMKNNCL 759 (845)
Q Consensus 752 Ey~~~gsL 759 (845)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99998644
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.98 E-value=0.016 Score=62.61 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=28.6
Q ss_pred CCCeEeCCCCCCCEEecCCCcEEEEeeccceec
Q 003134 798 RIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLY 830 (845)
Q Consensus 798 ~~~ivHrDLKp~NILld~~~~~kl~DFGla~~~ 830 (845)
+..++|+|+.+.||++++++.+.|+||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 346999999999999998888999999887654
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.47 E-value=0.035 Score=61.10 Aligned_cols=145 Identities=17% Similarity=0.206 Sum_probs=82.7
Q ss_pred CCcccccCcEEEEEEEECC--------CcEEEEEEcCccccc-----------c-------hHHHHHHHHHHhcCC-CCc
Q 003134 681 ANKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQ-----------G-------NREFVNEIGMISAQQ-HPN 733 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-H~n 733 (845)
.+.|..|-...+|++...+ ...|.+++....... + .+....|.++++.+. |.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456667778899988753 367888887443211 1 112234888877763 333
Q ss_pred eeeEEEEEEeCCEEEEEEeccCCCChhhh-----------------hhcCCcccccCCC--HHHHHHHHHHHH-------
Q 003134 734 LVKLYGCCVEGNQLLLVYEYMKNNCLSRA-----------------IFGKDTEYRLKLD--WPTRKKICIGIA------- 787 (845)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~Ey~~~gsL~~~-----------------l~~~~~~~~~~l~--~~~~~~i~~~ia------- 787 (845)
..++++++. +. +|+||++|.+|... +|........... |....++..++.
T Consensus 137 ~Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 566777653 22 89999997655211 1221111111122 223333433221
Q ss_pred ---------------HHH----HHHHhC-CCCCeEeCCCCCCCEEecCC------CcEEEEeecccee
Q 003134 788 ---------------RGL----AYLHED-SRIKIVHRDIKTSNVLLDKD------LNAKISDFGLAKL 829 (845)
Q Consensus 788 ---------------~aL----~yLH~~-~~~~ivHrDLKp~NILld~~------~~~kl~DFGla~~ 829 (845)
.-+ +++... .+..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 23458999999999999877 7899999998864
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.05 E-value=0.018 Score=64.14 Aligned_cols=143 Identities=9% Similarity=0.083 Sum_probs=83.0
Q ss_pred CCcccccCcEEEEEEEECC--------CcEEEEEEcCcccccchHHHHHHHHHHhcCC-CCceeeEEEEEEeCCEEEEEE
Q 003134 681 ANKVGEGGFGSVYKGILSD--------GTVIAVKQLSSKSRQGNREFVNEIGMISAQQ-HPNLVKLYGCCVEGNQLLLVY 751 (845)
Q Consensus 681 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lV~ 751 (845)
.+.+..|-...+|+....+ +..+++|+....... .....+|.++++.+. +.-.+++++.+ .+ ++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 3456677778999998753 578899987543221 112346777777663 22245566533 33 6899
Q ss_pred eccCCCChhh-----------------hhhcCCc-----c---cccCCCHHHHHHHHHHH-------------------H
Q 003134 752 EYMKNNCLSR-----------------AIFGKDT-----E---YRLKLDWPTRKKICIGI-------------------A 787 (845)
Q Consensus 752 Ey~~~gsL~~-----------------~l~~~~~-----~---~~~~l~~~~~~~i~~~i-------------------a 787 (845)
||++|..|.. .+|.... . ...+.-|.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999876421 0111111 0 01111233433333222 2
Q ss_pred HHHHHHHh---------------------CCCCCeEeCCCCCCCEEecCCCcEEEEeecccee
Q 003134 788 RGLAYLHE---------------------DSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (845)
Q Consensus 788 ~aL~yLH~---------------------~~~~~ivHrDLKp~NILld~~~~~kl~DFGla~~ 829 (845)
..+++|.+ ..+..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 23333321 12345899999999999 8888999999998874
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.09 E-value=0.83 Score=50.20 Aligned_cols=29 Identities=24% Similarity=0.455 Sum_probs=24.9
Q ss_pred eEeCCCCCCCEEe------cCCCcEEEEeecccee
Q 003134 801 IVHRDIKTSNVLL------DKDLNAKISDFGLAKL 829 (845)
Q Consensus 801 ivHrDLKp~NILl------d~~~~~kl~DFGla~~ 829 (845)
++|+|+.+.|||+ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998874
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.85 E-value=3.8 Score=40.61 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=65.0
Q ss_pred CCCceeeEEEEEEeCCEEEEEEeccCCCChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEeCCCCC
Q 003134 730 QHPNLVKLYGCCVEGNQLLLVYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLA-YLHEDSRIKIVHRDIKT 808 (845)
Q Consensus 730 ~H~nIv~l~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~-yLH~~~~~~ivHrDLKp 808 (845)
.||++ -...-.+++.+.+.++.-+++.=...+ ..++..++++++..|+...+ +++. -+|--|.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 78888 334446778888877765433222233 25678899999999988877 6664 46889999
Q ss_pred CCEEecCCCcEEEEeeccceecCC
Q 003134 809 SNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 809 ~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+||++|.++.+++.-.|+-..+.+
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~lpP 136 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESLPP 136 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTBSS
T ss_pred ceEEEeCCCcEEEEEcCCcccCCC
Confidence 999999999999999998666543
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.92 E-value=3 Score=41.23 Aligned_cols=95 Identities=8% Similarity=0.100 Sum_probs=68.4
Q ss_pred HHHHHhcCCCCceeeEEEEEEeCCEEEEEEeccCCC-ChhhhhhcCCcccccCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 003134 722 EIGMISAQQHPNLVKLYGCCVEGNQLLLVYEYMKNN-CLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIK 800 (845)
Q Consensus 722 E~~~l~~l~H~nIv~l~~~~~~~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~ 800 (845)
|+..|.. .||+++.. .+-..++.+.+.|+.-+.+ +... + ..++...+++++..|+...++++..
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i--------k~~~~~eKlr~l~ni~~l~~~~~~r---- 100 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I--------KSFTKNEKLRYLLNIKNLEEVNRTR---- 100 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G--------GGSCHHHHHHHHHHGGGGGGGGGSS----
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H--------HhcCHHHHHHHHHHHHHHHHHhcCc----
Confidence 3444433 78888866 4666677777766654322 2222 2 2578889999999999988777654
Q ss_pred eEeCCCCCCCEEecCCCcEEEEeeccceecCC
Q 003134 801 IVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (845)
Q Consensus 801 ivHrDLKp~NILld~~~~~kl~DFGla~~~~~ 832 (845)
+|-=|.|+||+++.++.+++.-.|+-..+.+
T Consensus 101 -~tf~L~P~NL~f~~~~~p~i~~RGik~~l~P 131 (215)
T 4ann_A 101 -YTFVLAPDELFFTRDGLPIAKTRGLQNVVDP 131 (215)
T ss_dssp -EECCCSGGGEEECTTSCEEESCCEETTTBSC
T ss_pred -eEEEEecceEEEcCCCCEEEEEccCccCCCC
Confidence 6889999999999999999999998665543
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=76.01 E-value=2.6 Score=30.17 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=7.0
Q ss_pred eehhHHH-HHHHHHHHHH
Q 003134 621 IMAAIVG-ASVLLVLLIL 637 (845)
Q Consensus 621 ii~~~v~-~~~~~~l~~~ 637 (845)
|++.+++ .++++++++.
T Consensus 13 IA~gVVgGv~~~~ii~~~ 30 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALG 30 (44)
T ss_dssp STHHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHHH
Confidence 4444554 3333333333
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=69.76 E-value=2.8 Score=29.98 Aligned_cols=10 Identities=40% Similarity=0.627 Sum_probs=5.6
Q ss_pred eeehhHHHHH
Q 003134 620 MIMAAIVGAS 629 (845)
Q Consensus 620 ~ii~~~v~~~ 629 (845)
.++++++|..
T Consensus 13 ~Ia~~vVGvl 22 (44)
T 2jwa_A 13 SIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 4556666643
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.62 E-value=3.8 Score=29.28 Aligned_cols=7 Identities=43% Similarity=0.904 Sum_probs=3.3
Q ss_pred eehhHHH
Q 003134 621 IMAAIVG 627 (845)
Q Consensus 621 ii~~~v~ 627 (845)
|++.+++
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 4444554
No 453
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=68.78 E-value=0.64 Score=52.21 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=18.4
Q ss_pred CCCcccccCcEEEEEEEECC-CcEEEE------EEcCccc--ccchHHHHHHHHHHhcCCCCceeeEEEEEEe
Q 003134 680 PANKVGEGGFGSVYKGILSD-GTVIAV------KQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVE 743 (845)
Q Consensus 680 ~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 743 (845)
..+.+| ||.||+|.+.. ..+||| |..+... .+....|.+|..++...+|+|+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 456676 99999999854 467888 6665432 2334578889999999999999999887653
No 454
>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1
Probab=44.88 E-value=12 Score=33.81 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=43.3
Q ss_pred cchhhhhhccccCCCCCceEEeecCCceEEEEEeeeeeEEcCCccccccccEEEEEEeccccccccCccccccCCCCCc
Q 003134 482 AVDLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGGTGIP 560 (845)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~ 560 (845)
++|-+++++.++.+.+-+|+|++. |+..+++.+... + ...+..++||+++...+.+++.....+..+|
T Consensus 5 AVEFDT~~N~e~~Dp~~nHVGIdv-Nsi~S~~s~~~~--------l--~sG~~~~v~I~Yd~~~~~L~V~l~~~~~~~p 72 (133)
T 1qmo_E 5 AVEFDTYLNPDYGDPNYIHIGIDV-NSIRSKVTAKWD--------W--QNGKIATAHISYNSVSKRLSVTSYYAGSKPA 72 (133)
T ss_dssp EEEEECSCCGGGTCCSSCEEEEEE-SSSSCSEEEECC--------C--CTTSCEEEEEEEETTTTEEEEEEECSSSCCE
T ss_pred EEEEeCCcCccccCCCCCeeEEec-ccccccceeeeE--------E--cCCCEEEEEEEEeCCCcEEEEEEccCCCccc
Confidence 456667777765566679999984 554433333321 1 1334578999999999988887654433344
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.45 E-value=66 Score=27.21 Aligned_cols=47 Identities=17% Similarity=0.212 Sum_probs=28.4
Q ss_pred CCCCCcccccccccccceeEeecccCCCCCCcccccCCCccEEEeecC
Q 003134 150 RLSGPFPKVLTNITTLKNLSIEGNLFTGSIPPDIRKLINLQKLILSSN 197 (845)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 197 (845)
.++.+-...|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445555566666777777766654 33344556666677777666554
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.31 E-value=18 Score=24.93 Aligned_cols=14 Identities=29% Similarity=0.266 Sum_probs=7.7
Q ss_pred cceeeehhHHHHHH
Q 003134 617 NHVMIMAAIVGASV 630 (845)
Q Consensus 617 ~~~~ii~~~v~~~~ 630 (845)
+...+.+++++..+
T Consensus 9 s~GaIAGiVvG~v~ 22 (38)
T 2k1k_A 9 TGGEIVAVIFGLLL 22 (38)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCCceeeeehHHHH
Confidence 34455666666544
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=36.51 E-value=25 Score=27.17 Aligned_cols=7 Identities=14% Similarity=0.016 Sum_probs=2.9
Q ss_pred hhhhccc
Q 003134 639 IMRWKGC 645 (845)
Q Consensus 639 ~~~~~~~ 645 (845)
.++|+++
T Consensus 31 cvkcrhR 37 (70)
T 2klu_A 31 SVRSRHR 37 (70)
T ss_dssp HHHSSCC
T ss_pred hhHHHHH
Confidence 3444433
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=35.64 E-value=79 Score=26.71 Aligned_cols=47 Identities=11% Similarity=0.061 Sum_probs=30.3
Q ss_pred cCCCCCCcccccCCCccEEEeecCcCcccCChhhhCCCCCCcEEeecC
Q 003134 174 LFTGSIPPDIRKLINLQKLILSSNSFTGELPAELTKLTNLNDLRISDN 221 (845)
Q Consensus 174 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 221 (845)
.++..-...|.++++|+.+.|-.+ ++..-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445444556777777777777664 44344556777777777777654
No 459
>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...
Probab=32.15 E-value=33 Score=34.26 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=45.3
Q ss_pred cchhhhhhccccCCCCCceEEeecCCceEEEEEeeeeeEEcCCccccccccEEEEEEeccccccccCccccccCCCCCce
Q 003134 482 AVDLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGGTGIPI 561 (845)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~i~i~~~~~~~~~~~~~~~~~~~~~~ 561 (845)
++|-+++++.++.+.+-+|+|++. |+..+++.+... + ...+..++||+++...+.+++.....+..+|+
T Consensus 6 AVEFDT~~n~~~~Dp~~nHVGIdv-Ns~~S~~~~~~~--------l--~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~ 74 (237)
T 1nls_A 6 AVELDTYPNTDIGDPSYPHIGIDI-KSVRSKKTAKWN--------M--QNGKVGTAHIIYNSVDKRLSAVVSYPNADSAT 74 (237)
T ss_dssp EEEEECSCCGGGTCCSSCEEEEEE-SSSSCSEEEECC--------C--CTTCEEEEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred EEEEeCCCCcccCCCCCCeeeEec-CCcccccccccc--------c--cCCCEEEEEEEEeCCCCEEEEEEecCCCCcce
Confidence 566677888777666789999994 554444433321 1 13456899999999999888876543333443
No 460
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.83 E-value=57 Score=24.34 Aligned_cols=6 Identities=0% Similarity=0.014 Sum_probs=2.2
Q ss_pred hhHHHH
Q 003134 623 AAIVGA 628 (845)
Q Consensus 623 ~~~v~~ 628 (845)
.+++++
T Consensus 14 ~svl~G 19 (54)
T 2l8s_A 14 LSAFAG 19 (54)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 461
>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*
Probab=21.51 E-value=47 Score=34.04 Aligned_cols=64 Identities=8% Similarity=-0.014 Sum_probs=43.3
Q ss_pred ccchhhhhhccccCCCCCceEEeecCCceEEEEEeeeeeEEcCCccccccccEEEEEEeccccccccCccccccCC
Q 003134 481 SAVDLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAGG 556 (845)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~i~i~~~~~~~~~~~~~~~~~ 556 (845)
-++|-+++++... +.+-+|+|++. |+..+++.+... -...+..++||+++...+..++.....+
T Consensus 143 vAVEFDT~~N~e~-Dp~~nHVGIDv-NSi~S~~t~~~~----------l~~G~~~~vwI~Yd~~tk~L~V~l~~~~ 206 (281)
T 3ujo_A 143 VAVEFDTFYNGGW-DPTERHIGIDV-NSIKSIKTTSWD----------FANGENAEVLITYDSSTNLLVASLVHPS 206 (281)
T ss_dssp EEEEECCSCCCSS-CCSSSEEEEEE-SSSCCSCEEECC----------CCSSCCEEEEEEECTTTCEEEEEEECTT
T ss_pred EEEEEeccccccC-CCCCCeEEEEc-CCCCcccccccc----------ccCCCEEEEEEEEeCCCCEEEEEEecCC
Confidence 3788888988777 55678999984 454333332221 1234557999999999999888765443
No 462
>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*
Probab=20.48 E-value=48 Score=33.38 Aligned_cols=64 Identities=13% Similarity=0.068 Sum_probs=44.0
Q ss_pred ccchhhhhhccccCCCCCceEEeecCCceEEEEEeeeeeEEcCCccccccccEEEEEEeccccccccCccccccC
Q 003134 481 SAVDLELYRTARVSPLSLTYYGLCLGNGNYTVRLHFAEIIFKNDSTFNSLGKRIFDIYIQEKLVKKDFNIEDEAG 555 (845)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~i~i~~~~~~~~~~~~~~~~ 555 (845)
-++|-+++++.++.+.+-+|+||.. |+..+++.+. |.-...+..++||.++...+.+++.....
T Consensus 123 vAVEFDT~~n~~~~Dp~~nHVGIdv-Nsi~S~~t~~----------~~l~~G~~~~v~I~Yd~~tk~L~V~l~~~ 186 (251)
T 3ipv_A 123 VAVEFDTYENTVFTDPPYTHIGFDV-NSISSIKTVK----------WSLANGEAAKVLITYNSAVKLLVASLVYP 186 (251)
T ss_dssp EEEEEECSCCGGGTCCSSCEEEEEE-SSSSCSEEEE----------CCCCTTCEEEEEEEEETTTTEEEEEEECT
T ss_pred EEEEEecccccccCCCCCCeEEEEc-CCCcccccce----------eEecCCCEEEEEEEEeCCCCEEEEEEecC
Confidence 3778888888777566779999995 4543333322 11223456899999999999888876533
Done!