Query 003138
Match_columns 845
No_of_seqs 311 out of 780
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 14:38:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.2E-22 4E-27 198.2 14.3 152 568-779 4-155 (169)
2 4gpm_A Engineered protein OR26 99.9 4.1E-22 1.4E-26 194.4 13.1 126 569-734 38-163 (169)
3 1awc_B Protein (GA binding pro 99.9 5.6E-21 1.9E-25 178.7 14.3 150 568-778 2-151 (153)
4 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.8E-21 9.6E-26 180.8 10.7 154 567-780 4-157 (162)
5 2jab_A H10-2-G3; HER2, darpin, 99.8 7.8E-21 2.7E-25 175.1 13.1 122 568-729 14-135 (136)
6 1oy3_D Transcription factor in 99.8 5.7E-21 2E-25 192.4 13.1 179 569-780 10-245 (282)
7 1d9s_A Cyclin-dependent kinase 99.8 3.2E-21 1.1E-25 177.7 10.0 124 568-732 12-136 (136)
8 3v31_A Ankyrin repeat family A 99.8 9E-21 3.1E-25 179.0 13.2 157 569-785 4-160 (167)
9 2etb_A Transient receptor pote 99.8 6.5E-21 2.2E-25 191.9 13.0 189 569-785 44-246 (256)
10 2rfa_A Transient receptor pote 99.8 9.4E-21 3.2E-25 187.2 13.9 177 569-781 38-218 (232)
11 3jxi_A Vanilloid receptor-rela 99.8 5.1E-21 1.7E-25 192.7 12.1 189 569-785 47-250 (260)
12 1bd8_A P19INK4D CDK4/6 inhibit 99.8 7.3E-21 2.5E-25 177.3 12.2 152 568-780 2-153 (156)
13 2rfm_A Putative ankyrin repeat 99.8 9.6E-21 3.3E-25 183.1 12.8 152 569-780 36-187 (192)
14 1yyh_A HN1;, notch 1, ankyrin 99.8 1.6E-20 5.5E-25 189.9 14.7 176 569-780 58-243 (253)
15 3v30_A DNA-binding protein rfx 99.8 1.3E-20 4.5E-25 178.7 13.2 153 570-781 4-156 (172)
16 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.1E-20 7.2E-25 178.0 14.5 151 569-779 15-165 (169)
17 3twr_A Tankyrase-2; ankyrin re 99.8 2.4E-20 8.2E-25 175.7 14.5 151 569-779 9-159 (165)
18 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.9E-20 1E-24 165.3 13.5 124 569-732 3-126 (126)
19 3f6q_A Integrin-linked protein 99.8 2.9E-20 9.9E-25 178.2 13.8 149 569-776 6-154 (179)
20 4b93_B Ankyrin repeat domain-c 99.8 2.4E-20 8.3E-25 193.5 14.4 143 570-772 88-230 (269)
21 2pnn_A Transient receptor pote 99.8 1.7E-20 5.9E-25 190.9 12.7 182 569-780 55-253 (273)
22 3v30_A DNA-binding protein rfx 99.8 5E-20 1.7E-24 174.7 14.3 126 569-734 37-162 (172)
23 2f8y_A Notch homolog 1, transl 99.8 5.3E-20 1.8E-24 180.4 14.3 172 569-776 26-207 (223)
24 3aji_A 26S proteasome non-ATPa 99.8 3.8E-20 1.3E-24 182.3 13.1 172 569-776 41-221 (231)
25 2dzn_A Probable 26S proteasome 99.8 9.1E-20 3.1E-24 178.9 15.0 167 569-769 37-217 (228)
26 1oy3_D Transcription factor in 99.8 2.9E-20 1E-24 187.2 11.5 148 569-732 46-250 (282)
27 1awc_B Protein (GA binding pro 99.8 6.6E-20 2.2E-24 171.4 12.8 119 569-727 35-153 (153)
28 3v31_A Ankyrin repeat family A 99.8 9.7E-20 3.3E-24 171.9 13.9 126 569-734 37-162 (167)
29 1k1a_A B-cell lymphoma 3-encod 99.8 1E-19 3.5E-24 179.5 14.6 154 570-779 81-235 (241)
30 1ihb_A P18-INK4C(INK6), cyclin 99.8 5.4E-20 1.8E-24 172.1 11.7 123 569-732 39-162 (162)
31 2xai_A ASB-9, ankyrin repeat a 99.8 8.3E-20 2.8E-24 185.8 13.4 169 569-774 37-213 (261)
32 3hra_A Ankyrin repeat family p 99.8 1E-19 3.5E-24 175.6 13.0 175 570-779 7-197 (201)
33 3ljn_A Hypothetical protein; a 99.8 4.2E-20 1.5E-24 195.7 11.2 148 569-732 21-198 (364)
34 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.2E-19 4.2E-24 169.0 12.5 120 569-730 37-156 (156)
35 2vge_A RELA-associated inhibit 99.8 4.6E-20 1.6E-24 186.8 10.4 170 569-778 22-206 (229)
36 1k1a_A B-cell lymphoma 3-encod 99.8 1.4E-19 4.9E-24 178.5 13.5 180 569-780 10-203 (241)
37 2rfm_A Putative ankyrin repeat 99.8 1.7E-19 5.9E-24 174.3 13.7 122 569-730 69-190 (192)
38 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.9E-19 6.4E-24 171.4 13.7 121 569-729 48-168 (169)
39 1bi7_B P16INK4A, MTS1, multipl 99.8 2.7E-20 9.3E-25 175.3 7.8 124 568-732 12-136 (156)
40 3jxi_A Vanilloid receptor-rela 99.8 1.1E-19 3.8E-24 182.9 12.4 137 568-734 93-252 (260)
41 1s70_B 130 kDa myosin-binding 99.8 2E-19 6.7E-24 184.0 14.2 165 569-769 74-274 (299)
42 2xai_A ASB-9, ankyrin repeat a 99.8 1.5E-19 5E-24 184.0 13.0 174 569-780 4-186 (261)
43 1ikn_D Protein (I-kappa-B-alph 99.8 1.5E-19 5.3E-24 179.8 12.8 159 569-781 46-205 (236)
44 3b7b_A Euchromatic histone-lys 99.8 2.3E-19 7.7E-24 177.5 13.5 148 569-732 12-169 (237)
45 3twr_A Tankyrase-2; ankyrin re 99.8 9.8E-20 3.4E-24 171.6 10.1 122 569-731 43-164 (165)
46 2dzn_A Probable 26S proteasome 99.8 2.4E-19 8.2E-24 175.9 13.2 177 569-780 3-194 (228)
47 3utm_A Tankyrase-1; tankyrase, 99.8 3.4E-19 1.2E-23 184.2 15.0 148 569-732 92-305 (351)
48 4hbd_A KN motif and ankyrin re 99.8 3.7E-19 1.3E-23 184.1 15.0 133 569-731 112-274 (276)
49 2etb_A Transient receptor pote 99.8 2.5E-19 8.6E-24 180.3 12.8 132 569-732 91-246 (256)
50 3aaa_C Myotrophin, protein V-1 99.8 3E-19 1E-23 161.5 11.9 115 569-726 8-122 (123)
51 3t8k_A Uncharacterized protein 99.8 1.3E-19 4.5E-24 179.0 10.1 128 569-734 39-181 (186)
52 2pnn_A Transient receptor pote 99.8 2.5E-19 8.6E-24 182.4 12.4 134 569-732 102-258 (273)
53 3d9h_A CDNA FLJ77766, highly s 99.8 4.7E-19 1.6E-23 183.5 14.3 164 569-769 93-264 (285)
54 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.2E-19 4.1E-24 183.1 9.5 154 569-782 6-161 (239)
55 3d9h_A CDNA FLJ77766, highly s 99.8 3.1E-19 1.1E-23 184.9 12.9 175 569-781 60-243 (285)
56 3utm_A Tankyrase-1; tankyrase, 99.8 8.3E-19 2.8E-23 181.3 15.9 177 569-780 59-300 (351)
57 3b7b_A Euchromatic histone-lys 99.8 6.1E-19 2.1E-23 174.4 14.1 171 570-776 46-226 (237)
58 3c5r_A BARD-1, BRCA1-associate 99.8 3.6E-20 1.2E-24 170.2 4.8 121 569-729 11-131 (137)
59 2rfa_A Transient receptor pote 99.8 6.3E-19 2.1E-23 174.1 13.9 135 569-734 76-224 (232)
60 3hra_A Ankyrin repeat family p 99.8 4.9E-19 1.7E-23 170.8 12.8 146 569-729 40-200 (201)
61 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.4E-19 1.2E-23 154.2 10.4 91 610-731 2-92 (93)
62 3f6q_A Integrin-linked protein 99.8 2.1E-19 7E-24 172.3 9.4 125 569-733 40-164 (179)
63 1n11_A Ankyrin; clathrin, BAND 99.8 6.9E-19 2.3E-23 190.5 14.3 172 569-776 213-393 (437)
64 4g8k_A 2-5A-dependent ribonucl 99.8 1E-18 3.6E-23 183.1 15.0 158 569-732 126-298 (337)
65 1ycs_B 53BP2, P53BP2; ankyrin 99.8 4.9E-19 1.7E-23 178.6 11.4 125 569-733 38-165 (239)
66 3deo_A Signal recognition part 99.8 4.4E-19 1.5E-23 171.6 10.5 110 568-718 44-154 (183)
67 1ikn_D Protein (I-kappa-B-alph 99.8 3.4E-19 1.2E-23 177.2 10.1 131 569-733 79-210 (236)
68 3aji_A 26S proteasome non-ATPa 99.8 8.3E-19 2.8E-23 172.8 12.7 177 569-780 7-192 (231)
69 1dcq_A PYK2-associated protein 99.8 1.2E-18 4.1E-23 182.0 14.6 138 569-742 131-271 (278)
70 3ljn_A Hypothetical protein; a 99.8 1E-18 3.6E-23 185.0 14.2 129 569-732 139-269 (364)
71 4b93_B Ankyrin repeat domain-c 99.8 5.5E-19 1.9E-23 183.3 11.7 161 570-781 13-206 (269)
72 3kea_A K1L; tropism, ANK repea 99.8 2.9E-19 9.8E-24 185.4 9.4 120 569-730 32-152 (285)
73 1wdy_A 2-5A-dependent ribonucl 99.8 1.3E-18 4.4E-23 174.3 13.5 177 569-780 73-273 (285)
74 2f8y_A Notch homolog 1, transl 99.8 1.6E-18 5.5E-23 169.8 13.4 125 570-734 94-218 (223)
75 1s70_B 130 kDa myosin-binding 99.8 1.6E-18 5.3E-23 177.3 13.5 178 569-781 41-253 (299)
76 1yyh_A HN1;, notch 1, ankyrin 99.8 9.4E-19 3.2E-23 176.9 11.1 120 570-729 126-245 (253)
77 1wdy_A 2-5A-dependent ribonucl 99.8 2E-18 7E-23 172.8 13.1 124 569-732 6-130 (285)
78 2fo1_E LIN-12 protein; beta-ba 99.8 8.8E-19 3E-23 188.5 11.0 179 569-782 167-368 (373)
79 3ehr_A Osteoclast-stimulating 99.8 3.6E-19 1.2E-23 176.2 7.3 125 569-733 74-199 (222)
80 4hbd_A KN motif and ankyrin re 99.8 2.8E-19 9.7E-24 185.0 6.6 176 571-780 79-270 (276)
81 3ui2_A Signal recognition part 99.8 1.4E-18 4.9E-23 176.6 11.0 124 568-732 45-185 (244)
82 3c5r_A BARD-1, BRCA1-associate 99.8 2.3E-18 7.8E-23 158.1 10.5 120 606-776 6-125 (137)
83 3t8k_A Uncharacterized protein 99.7 5.8E-19 2E-23 174.4 6.4 151 570-781 8-175 (186)
84 1d9s_A Cyclin-dependent kinase 99.7 1.1E-18 3.9E-23 160.6 7.9 126 602-779 4-130 (136)
85 3eu9_A Huntingtin-interacting 99.7 4.4E-18 1.5E-22 166.6 12.3 122 570-730 78-200 (240)
86 1sw6_A Regulatory protein SWI6 99.7 1.4E-18 4.8E-23 184.0 9.4 148 569-769 132-325 (327)
87 3lvq_E ARF-GAP with SH3 domain 99.7 3.7E-18 1.3E-22 191.6 12.9 131 570-734 134-267 (497)
88 2b0o_E UPLC1; arfgap, structur 99.7 8.6E-18 3E-22 177.7 13.9 129 570-732 153-284 (301)
89 2fo1_E LIN-12 protein; beta-ba 99.7 4E-18 1.4E-22 183.4 11.5 150 569-732 200-371 (373)
90 1n11_A Ankyrin; clathrin, BAND 99.7 6.1E-18 2.1E-22 183.1 12.9 177 569-781 15-200 (437)
91 3kea_A K1L; tropism, ANK repea 99.7 1.5E-18 5.2E-23 180.0 6.7 150 569-734 63-222 (285)
92 3aaa_C Myotrophin, protein V-1 99.7 1.1E-17 3.7E-22 151.2 10.9 111 609-770 6-116 (123)
93 4g8k_A 2-5A-dependent ribonucl 99.7 3.5E-17 1.2E-21 171.5 15.6 162 569-780 26-188 (337)
94 2jab_A H10-2-G3; HER2, darpin, 99.7 8.7E-18 3E-22 154.7 9.7 121 608-779 12-132 (136)
95 3jue_A Arfgap with coiled-coil 99.7 2E-17 6.8E-22 181.1 13.4 124 569-732 200-326 (368)
96 3eu9_A Huntingtin-interacting 99.7 2E-17 6.9E-22 161.9 11.4 175 570-780 11-197 (240)
97 2l6b_A NR1C; ankyrin, consensu 99.7 2.5E-17 8.6E-22 146.8 8.3 95 607-732 6-100 (115)
98 3ehr_A Osteoclast-stimulating 99.7 5.3E-17 1.8E-21 160.7 11.5 123 607-779 70-192 (222)
99 1n0r_A 4ANK, 4 ankyrin repeats 99.7 5.4E-17 1.9E-21 144.1 10.4 120 609-779 1-120 (126)
100 2vge_A RELA-associated inhibit 99.7 5.1E-17 1.7E-21 164.5 11.2 125 607-781 18-144 (229)
101 1bi7_B P16INK4A, MTS1, multipl 99.7 5E-17 1.7E-21 153.0 8.8 126 607-784 9-135 (156)
102 2zgd_A 3 repeat synthetic anky 99.7 9.8E-17 3.3E-21 143.7 9.4 90 606-726 20-109 (110)
103 1sw6_A Regulatory protein SWI6 99.7 2.7E-17 9.1E-22 174.2 6.5 123 570-731 99-229 (327)
104 3deo_A Signal recognition part 99.6 7.4E-17 2.5E-21 156.0 6.0 96 605-732 39-135 (183)
105 2aja_A Ankyrin repeat family p 99.6 3.2E-17 1.1E-21 179.8 0.4 128 569-731 93-223 (376)
106 3ui2_A Signal recognition part 99.6 2.5E-16 8.4E-21 160.1 5.4 95 606-732 41-136 (244)
107 2l6b_A NR1C; ankyrin, consensu 99.6 8.8E-16 3E-20 136.8 6.3 103 569-711 10-112 (115)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.6 6.7E-15 2.3E-19 127.2 8.8 88 569-690 3-90 (93)
109 2b0o_E UPLC1; arfgap, structur 99.6 1.8E-15 6.3E-20 159.9 6.3 106 569-720 191-299 (301)
110 1dcq_A PYK2-associated protein 99.5 3.9E-14 1.3E-18 148.0 10.6 126 610-780 130-258 (278)
111 3jue_A Arfgap with coiled-coil 99.5 4.1E-14 1.4E-18 154.9 10.1 121 609-780 198-321 (368)
112 2aja_A Ankyrin repeat family p 99.5 3.7E-15 1.3E-19 163.5 1.3 119 569-732 129-250 (376)
113 3lvq_E ARF-GAP with SH3 domain 99.5 4.4E-14 1.5E-18 158.6 8.9 125 612-781 134-261 (497)
114 1ul4_A SPL4, squamosa promoter 99.4 1.2E-14 4.1E-19 131.0 0.2 38 1-38 55-92 (94)
115 2zgd_A 3 repeat synthetic anky 99.4 7.4E-13 2.5E-17 118.4 9.6 86 568-687 24-109 (110)
116 1ul5_A SPL7, squamosa promoter 99.3 1.1E-13 3.7E-18 123.5 0.1 35 1-35 50-84 (88)
117 2cxk_A Camta1, calmodulin bind 56.5 37 0.0012 30.4 7.9 45 399-444 7-51 (95)
118 1uad_C RSEC5, exocyst complex 48.3 27 0.00094 31.2 5.7 39 398-438 7-46 (99)
119 1pby_A Quinohemoprotein amine 22.4 1.5E+02 0.005 34.0 7.1 44 393-436 270-318 (489)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=1.2e-22 Score=198.23 Aligned_cols=152 Identities=24% Similarity=0.190 Sum_probs=116.5
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
+.+.|+.|+++|+.++|+.||+.+. +++..+..|+||||+|+..++.+++++||++|++
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~~Ga---------dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad------------ 62 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIENGA---------DVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD------------ 62 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc------------
Confidence 3456889999999999999998653 2334567799999999999999999999999986
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.++..|+||||+|+..++.+ ++++|++ .||++|.+|.+|+||||+|+.+|+.+++++|+
T Consensus 63 ------------~~~~d~~g~TpLh~A~~~g~~~-~v~~Ll~------~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll 123 (169)
T 4gpm_A 63 ------------VNAKDSDGRTPLHHAAENGHKE-VVKLLIS------KGADVNAKDSDGRTPLHHAAENGHKEVVKLLI 123 (169)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------hhhhccCCCCHHHHHHHcCCHH-HHHHHHH------CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4566778888888888887765 7888854 46788888888888888888888888888887
Q ss_pred HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhh
Q 003138 728 RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 728 ~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~ 779 (845)
++.++-. + +...+.|+++++...++..+++.+
T Consensus 124 ~~gad~~---------~-----------~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 124 SKGADVN---------T-----------SDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp HTTCCTT---------C-----------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCCcc---------c-----------cCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7654322 1 223456778888776655555444
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=4.1e-22 Score=194.35 Aligned_cols=126 Identities=26% Similarity=0.247 Sum_probs=108.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
+++||+|+..+..++++.||+.+. ++...+..|+||||+|+++|+.++|++||++|+|
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~ga---------d~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad------------- 95 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGA---------DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD------------- 95 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhccc---------chhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-------------
Confidence 479999999999999999998652 2334467799999999999999999999999986
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.+|..|+||||+||..++.+ ++++|++ .||++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 96 -----------vn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 96 -----------VNAKDSDGRTPLHHAAENGHKE-VVKLLIS------KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5778889999999999998876 8999965 578999999999999999999999999999999
Q ss_pred hhhhcC
Q 003138 729 KINKKS 734 (845)
Q Consensus 729 kl~~~~ 734 (845)
++++-+
T Consensus 158 ~GA~ie 163 (169)
T 4gpm_A 158 QGGWLE 163 (169)
T ss_dssp C-----
T ss_pred CCCCcC
Confidence 988754
No 3
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.85 E-value=5.6e-21 Score=178.69 Aligned_cols=150 Identities=17% Similarity=0.093 Sum_probs=122.7
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
+.+.|++|+..|..++++.|++.+.. ++ .+..|.||||+|+..|+.++|++|+++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~~--------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 59 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP--FT--------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS------------ 59 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC--CC--------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC--CC--------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 35789999999999999999987532 21 245699999999999999999999999876
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|+
T Consensus 60 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 60 ------------RDARTKVDRTPLHMAASEGHAN-IVEVLLK------HGADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHT------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCCCCCCCCCHHHHHHHcChHH-HHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4667788999999999998876 8999964 57889999999999999999999999999998
Q ss_pred HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhh
Q 003138 728 RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKV 778 (845)
Q Consensus 728 ~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~ 778 (845)
++..+-. + +...+.|+++++...++...++.
T Consensus 121 ~~ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 121 KYGADVH---------T-----------QSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HTTCCTT---------C-----------CCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCCcc---------c-----------cCCCCCCHHHHHHHcCCHHHHHH
Confidence 8755422 1 22345678999888766555543
No 4
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=2.8e-21 Score=180.78 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=124.2
Q ss_pred ccchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhh
Q 003138 567 RFKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 646 (845)
Q Consensus 567 Rf~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k 646 (845)
++.++|++|+..|..++++.||+.+. ++...+..|.||||+|+. |+.++|++||++|++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~---------~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~----------- 62 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNV---------NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN----------- 62 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCC---------CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-----------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCC---------CccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-----------
Confidence 46789999999999999999997542 223445679999999999 999999999999876
Q ss_pred hhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 647 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 647 ~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 63 -------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 63 -------------PDLKDRTGFAVIHDAARAGFLD-TLQTLLE------FQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp -------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4667789999999999998876 8999965 5788999999999999999999999999999
Q ss_pred HHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 727 QRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 727 ~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
+++..+.. .+ +...+.|+++++...++...++.+.
T Consensus 123 l~~g~~~~--------~~-----------~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 123 VKHTASNV--------GH-----------RNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp HHHSCCCT--------TC-----------CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHccCCCC--------CC-----------cCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 88765421 11 2335568899998876666665543
No 5
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=7.8e-21 Score=175.13 Aligned_cols=122 Identities=24% Similarity=0.191 Sum_probs=107.2
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.++||+|+..|..++++.||+.+. ++ +..+..|.||||+|+..++.++|++||++|++
T Consensus 14 ~~t~l~~A~~~g~~~~v~~Ll~~g~--~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 72 (136)
T 2jab_A 14 LGKKLLEAARAGQDDEVRILMANGA--DV-------NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------------ 72 (136)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC--CT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred ccHHHHHHHHhCCHHHHHHHHHcCC--CC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4689999999999999999998652 22 23456799999999999999999999999876
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|++++.+|.+|+||||+|+.+|+.+++++|+
T Consensus 73 ------------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll 133 (136)
T 2jab_A 73 ------------VNAVDAIGFTPLHLAAFIGHLE-IAEVLLK------HGADVNAQDKFGKTAFDISIGNGNEDLAEILQ 133 (136)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ------------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 4667789999999999998876 8999965 57889999999999999999999999999998
Q ss_pred Hh
Q 003138 728 RK 729 (845)
Q Consensus 728 ~k 729 (845)
++
T Consensus 134 ~~ 135 (136)
T 2jab_A 134 KL 135 (136)
T ss_dssp HC
T ss_pred Hc
Confidence 75
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.84 E-value=5.7e-21 Score=192.39 Aligned_cols=179 Identities=21% Similarity=0.174 Sum_probs=131.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
+++||+|+..|..++++.||+.+...+ .....+..|.||||+|+..|+.++|++||++|++++... ..|++
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHE------YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALH 83 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSG------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcc------cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 479999999999999999998764321 022335668999999999999999999999998877332 22443
Q ss_pred hhhhhccCC-----------------------------------------------------cccccCCCCCCCCChHHH
Q 003138 646 KQLVDRAGS-----------------------------------------------------GFIFKPNVIGPAGLTPLH 672 (845)
Q Consensus 646 k~lv~~~~~-----------------------------------------------------~~~f~pNa~g~~G~TPLH 672 (845)
.++..+..+ .+..++|.++..|.||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 332211000 011247888999999999
Q ss_pred HHHhCCChHHHHHHhhcCCCCCCcccccCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccc
Q 003138 673 VAACRDDAENVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDW 751 (845)
Q Consensus 673 iAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~-G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~ 751 (845)
+|+..++.+ ++++|++ .|+++|.+|.. |+||||+|+.+|+.+++++|+++.++-.
T Consensus 164 ~A~~~g~~~-~v~~Ll~------~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~----------------- 219 (282)
T 1oy3_D 164 VAVIHKDAE-MVRLLRD------AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT----------------- 219 (282)
T ss_dssp HHHHTTCHH-HHHHHHH------HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-----------------
T ss_pred HHHHcCCHH-HHHHHHH------cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc-----------------
Confidence 999998876 8999964 57889999865 9999999999999999999998755432
Q ss_pred cccCCCCCCCCccccccccccchhhhhhc
Q 003138 752 DSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 752 ~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+...+.|++|++...++...++.+.
T Consensus 220 ---~~d~~g~tpL~~A~~~~~~~~v~~Ll 245 (282)
T 1oy3_D 220 ---ARMYGGRTPLGSALLRPNPILARLLR 245 (282)
T ss_dssp ---CCCTTSCCHHHHHHTSSCHHHHHHHH
T ss_pred ---ccccCCCCHHHHHHHcCCcHHHHHHH
Confidence 12335678899999876666555544
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=3.2e-21 Score=177.71 Aligned_cols=124 Identities=21% Similarity=0.179 Sum_probs=108.4
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.++||+|+..|+.++++.||+.+. + ++..+..|+||||+|+. ++.++|++||++|++
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g~--~-------~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~------------ 69 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAGA--D-------PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE------------ 69 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTTC--C-------TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCC--C-------cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC------------
Confidence 3589999999999999999998642 2 22345679999999999 999999999999976
Q ss_pred hhhccCCcccccCCCCCCC-CChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPA-GLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~-G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.++.. |.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|
T Consensus 70 ------------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 130 (136)
T 1d9s_A 70 ------------PNCADPATLTRPVHDAAREGFLD-TLVVLHR------AGARLDVCDAWGRLPVDLAEEQGHRDIARYL 130 (136)
T ss_dssp ------------SSCCBTTTTBCHHHHHHHHTCHH-HHHHHHH------TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHH
T ss_pred ------------CCCcCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4667778 999999999998876 8999965 5788999999999999999999999999999
Q ss_pred HHhhhh
Q 003138 727 QRKINK 732 (845)
Q Consensus 727 ~~kl~~ 732 (845)
+++.++
T Consensus 131 l~~Gad 136 (136)
T 1d9s_A 131 HAATGD 136 (136)
T ss_dssp HHHHCC
T ss_pred HHcCCC
Confidence 988653
No 8
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.84 E-value=9e-21 Score=178.99 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=118.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.. .++ ...+..|+||||+|++.++.++|++|+++|++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~--~~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 61 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQE--NVI-------NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD------------- 61 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHS--SCT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred cchHHHHHHCCCHHHHHHHHHcC--CCc-------CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-------------
Confidence 36899999999999999999864 222 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 62 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 62 -----------PQLLGKGRESALSLACSKGYTD-IVKMLLD------CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp -----------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCcHHHHHHHcCCHH-HHHHHHH------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4556677888888888887765 7888854 467788888888888888888888888887776
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhccccHH
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRL 785 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~~C~~ 785 (845)
+..+-. + +...+.|+++++...++...++.+..+..+
T Consensus 124 ~g~~~~---------~-----------~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 124 SGADPT---------I-----------ETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TTCCTT---------C-----------CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCCCC---------C-----------cCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 544321 1 223456778888877766666666554443
No 9
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=6.5e-21 Score=191.91 Aligned_cols=189 Identities=18% Similarity=0.097 Sum_probs=136.3
Q ss_pred chHHHHHHhC---CCHHHHHHHHHhhhcCCcCCC--CCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCc
Q 003138 569 KWLLEFSMEH---DWCAVVKKLLGILFDGTVDTG--DHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGS 643 (845)
Q Consensus 569 ~~LL~fAve~---g~~aVVk~LLd~l~~~~v~~~--~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~ 643 (845)
.++||+|+.. |+.++++.||+.+.+.+.-.. .......+..|.||||+|++.|+.++|++||++|++++.....
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~- 122 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACG- 122 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS-
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccc-
Confidence 4899999999 999999999998765431000 0011123456999999999999999999999999986532210
Q ss_pred hhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHH--cCCHH
Q 003138 644 RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL--RAHHS 721 (845)
Q Consensus 644 ~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~--~Gn~e 721 (845)
..+..+.+..+..|.||||+|+..++.+ ++++|++.+ ..|+++|.+|.+|+||||+|+. .|+.+
T Consensus 123 ----------~~~~~~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~~~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~~ 188 (256)
T 2etb_A 123 ----------RFFQKHQGTCFYFGELPLSLAACTKQWD-VVTYLLENP---HQPASLEATDSLGNTVLHALVMIADNSPE 188 (256)
T ss_dssp ----------GGGSCCSSSCCCSCSSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred ----------ccccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---ccCCCcCccCCCCCCHHHHHHHcccCCch
Confidence 0011122333445999999999998876 899997521 1588999999999999999999 88888
Q ss_pred -------HHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhccccHH
Q 003138 722 -------YIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRL 785 (845)
Q Consensus 722 -------~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~~C~~ 785 (845)
++++|+++.++-. ... .+ .+.+...+.|++|+++..|+...++.+..+-..
T Consensus 189 ~~~~~~~iv~~Ll~~ga~~~--~~~---~~--------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 189 NSALVIHMYDGLLQMGARLC--PTV---QL--------EEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHS--TTC---CG--------GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCcc--ccc---cc--------ccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999887753 110 00 122344667899999998888887776654433
No 10
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=9.4e-21 Score=187.24 Aligned_cols=177 Identities=19% Similarity=0.124 Sum_probs=132.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+.+... ......+..|.||||+|+..++.++|++||++|++.+.....
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~------ 107 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVF----EPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATG------ 107 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGG----CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCS------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhcc----ccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCC------
Confidence 4799999999999999999997643211 111234567999999999999999999999999987632211
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHH----H
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYI----H 724 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~i----e 724 (845)
..+.+.++..+..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+.+++ +
T Consensus 108 -----~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~ 175 (232)
T 2rfa_A 108 -----SVFHYRPHNLIYYGEHPLSFAACVGSEE-IVRLLIE------HGADIRAQDSLGNTVLHILILQPNKTFACQMYN 175 (232)
T ss_dssp -----GGGSCCTTCSCCCCSSHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHH
T ss_pred -----cceeecccccccCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHH
Confidence 1123356777889999999999998876 8999965 5789999999999999999999999998 5
Q ss_pred HHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 725 LVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 725 LL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
+|.++.++.. .. ...+.+...+.|++++++..|+...++.+..
T Consensus 176 ~Ll~~g~~~~-~~-------------~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 176 LLLSYDGGDH-LK-------------SLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp HHHHTTCSCS-SC-------------CGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHhcCCchh-hh-------------hhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 5555444321 00 0012244566789999999877777766554
No 11
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=5.1e-21 Score=192.72 Aligned_cols=189 Identities=19% Similarity=0.078 Sum_probs=135.7
Q ss_pred chHHHHHH---hCCCHHHHHHHHHhhhcCCcCC--CCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCc
Q 003138 569 KWLLEFSM---EHDWCAVVKKLLGILFDGTVDT--GDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGS 643 (845)
Q Consensus 569 ~~LL~fAv---e~g~~aVVk~LLd~l~~~~v~~--~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~ 643 (845)
.++||+|+ +.|+.++++.||+.+.+.+... -..+....+..|.||||+|+..|+.++|++||++|++++....+.
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~ 126 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc
Confidence 48999999 7899999999999875421100 001122334579999999999999999999999999865322100
Q ss_pred hhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCC-cccccCCcCCCCCCHHHHHHHcCC---
Q 003138 644 RQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVG-IEAWKSAQDSTGLTPNDYASLRAH--- 719 (845)
Q Consensus 644 ~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig-~gA~vNakD~~G~TPLHyAa~~Gn--- 719 (845)
.. ..-+.+..+..|.||||+|+..++.+ ++++|++. | .|+++|.+|.+|+||||+|+..|+
T Consensus 127 --------~~--~~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~----~~~ga~~~~~d~~g~TpLh~A~~~~~~~~ 191 (260)
T 3jxi_A 127 --------FF--QPKDEGGYFYFGELPLSLAACTNQPH-IVHYLTEN----GHKQADLRRQDSRGNTVLHALVAIADNTR 191 (260)
T ss_dssp --------CC--SSSCCCCSCCSCSSHHHHHHHTTCHH-HHHHHHHC----SSCCCCTTCCCTTSCCHHHHHHHHCCSSH
T ss_pred --------cc--CcccccccccCCCCHHHHHHHcCCHH-HHHHHHhc----cccCCCCcccCCCCCcHHHHHHHhccCch
Confidence 00 00012333468999999999998876 89999762 2 689999999999999999999888
Q ss_pred ------HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhccccHH
Q 003138 720 ------HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQCRL 785 (845)
Q Consensus 720 ------~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~~C~~ 785 (845)
.+++++|+++.++-. .... ..+.+...+.|++|+++..|+...++.+..+...
T Consensus 192 ~~~~~~~~~v~~Ll~~ga~~~--~~~~-----------~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 192 ENTKFVTKMYDLLLIKCAKLF--PDTN-----------LEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC--TTCC-----------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCcccc--cccc-----------hhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 689999998877653 1000 0112344667899999999888888777665443
No 12
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.84 E-value=7.3e-21 Score=177.30 Aligned_cols=152 Identities=18% Similarity=0.135 Sum_probs=123.4
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.+.|++|+..|..++++.||+. ...++ ...+..|.||||+ +..|+.++|++|+++|++
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~-------~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~------------ 60 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHP-------DALNRFGKTALQV-MMFGSTAIALELLKQGAS------------ 60 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCT-------TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCc-------cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC------------
Confidence 45799999999999999999986 22222 2345679999999 999999999999999876
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+.+++++|.
T Consensus 61 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 121 (156)
T 1bd8_A 61 ------------PNVQDTSGTSPVHDAARTGFLD-TLKVLVE------HGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121 (156)
T ss_dssp ------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ------------CCCcCCCCCCHHHHHHHcCcHH-HHHHHHH------cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHH
Confidence 4667889999999999998876 8999965 57889999999999999999999999999998
Q ss_pred HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 728 RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 728 ~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
++ .+.. + +...+.|+++++...++...++.+.
T Consensus 122 ~~-~~~~---------~-----------~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 122 AE-SDLH---------R-----------RDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp TT-SCTT---------C-----------CCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred hc-cCCC---------C-----------cCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 77 3321 1 2335668899998877666665543
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=9.6e-21 Score=183.11 Aligned_cols=152 Identities=18% Similarity=0.091 Sum_probs=122.6
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.|++.+.+ ++ ..+..|.||||+|++.++.++|++|+++|++
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~--~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 93 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDK--LE-------DKDIEGSTALIWAVKNNRLGIAEKLLSKGSN------------- 93 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCC--TT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccc--cc-------cccccCccHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 4799999999999999999987632 22 3356699999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 94 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 94 -----------VNTKDFSGKTPLMWSIIFGYSE-MSYFLLE------HGANVNDRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp -----------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHcCCHH-HHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4667788999999999988776 8999964 578899999999999999999999999998887
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
+..+-. + +...+.|+++++...++...++.+.
T Consensus 156 ~ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 156 LGADIS---------A-----------RDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp TTCCTT---------C-----------BCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCCCCC---------C-----------cCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 754322 1 2235567899988876666655443
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.6e-20 Score=189.87 Aligned_cols=176 Identities=14% Similarity=0.090 Sum_probs=136.9
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCCCC---CCch
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDK---PGSR 644 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~ga-d~~~~~---~~~~ 644 (845)
.++||+|+..|..++++.||+.+.+ +...+..|+||||+|+..++.++|++|+++++ +++... ..++
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 128 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASAD---------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 128 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHH
Confidence 4799999999999999999986532 22345679999999999999999999999987 554322 2355
Q ss_pred hhhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcC
Q 003138 645 QKQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 718 (845)
Q Consensus 645 ~k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~G 718 (845)
+.++..+..+.. ..++|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|.||||+|+.+|
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLK------NGANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHCC
Confidence 555444332222 2368899999999999999998876 8999965 57889999999999999999999
Q ss_pred CHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 719 HHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 719 n~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
+.+++++|+++.++.. + +...+.|++++++..|+..+++.+.
T Consensus 202 ~~~~v~~Ll~~ga~~~---------~-----------~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 202 SYETAKVLLDHFANRD---------I-----------TDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp CHHHHHHHHHTTCCTT---------C-----------CCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcc---------c-----------cccCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999998866532 1 2335678899999987776665443
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=1.3e-20 Score=178.73 Aligned_cols=153 Identities=14% Similarity=0.074 Sum_probs=116.1
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+..|..++++.||+.... .....+..|+||||+|++.|+.++|++||++|++
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------------- 61 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-------------- 61 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--------------
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 579999999999999999975311 1223456799999999999999999999999976
Q ss_pred hccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 003138 650 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 729 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~k 729 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|+++
T Consensus 62 ----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 62 ----------PHILAKERESALSLASTGGYTD-IVGLLLE------RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp ----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHT------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------chhhcccCCCHHHHHHHCCCHH-HHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4566778888888888887765 7888854 4677888888888888888888888888888776
Q ss_pred hhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 730 INKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 730 l~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
..+-. + +...+.|+++++...++...++.+..
T Consensus 125 ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 125 GADLT---------T-----------EADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp TCCTT---------C-----------CCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCcc---------c-----------cCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 44321 1 22345677888888766666555543
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=2.1e-20 Score=177.95 Aligned_cols=151 Identities=21% Similarity=0.178 Sum_probs=123.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.+.|++|+..|..++++.||+.+.+ + +..+..|.||||+|++.|+.++|++||++|++
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 72 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGAD--V-------NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD------------- 72 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCC--C-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 5799999999999999999986532 2 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|.||||+|+.+|+.+++++|++
T Consensus 73 -----------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 73 -----------VNAVDHAGMTPLRLAALFGHLE-IVEVLLK------NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4667788999999999998876 8999965 578899999999999999999999999999988
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhh
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~ 779 (845)
+..+-. + +...+.|+++++...++...++.+
T Consensus 135 ~g~~~~---------~-----------~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 135 NGADVN---------A-----------QDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp TTCCTT---------C-----------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCCC---------C-----------cCCCCCCHHHHHHHhCCHHHHHHH
Confidence 754321 1 223456789998887665555444
No 17
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=2.4e-20 Score=175.75 Aligned_cols=151 Identities=21% Similarity=0.175 Sum_probs=121.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++|++|+..|..++++.||+.. ..+....+..|.||||+|+..++.++|++|+++|++
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 67 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQ--------SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD------------- 67 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTT--------TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHhCCHHHHHHHHHcC--------CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-------------
Confidence 47999999999999999999642 122234456689999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|++
T Consensus 68 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 68 -----------VHAKDKGGLVPLHNACSYGHYE-VAELLVK------HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCcHH-HHHHHHh------CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5677889999999999998876 8999965 578899999999999999999999999999988
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhh
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~ 779 (845)
+..+-. .+...+.|+++++.. ++..+++.+
T Consensus 130 ~ga~~~--------------------~~~~~g~t~l~~a~~-~~~~i~~~L 159 (165)
T 3twr_A 130 HGADPT--------------------KKNRDGNTPLDLVKD-GDTDIQDLL 159 (165)
T ss_dssp TTCCTT--------------------CCCTTSCCTGGGSCT-TCHHHHHHH
T ss_pred cCCCCc--------------------ccCCCCCChhHhHhc-CChHHHHHH
Confidence 755422 133456788998665 555444433
No 18
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.9e-20 Score=165.25 Aligned_cols=124 Identities=30% Similarity=0.281 Sum_probs=107.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.|++.+.+ + ...+..|.||||+|+..++.+++++|+++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~--~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGAD--V-------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCC--T-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCC--C-------CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 3789999999999999999987532 2 23356799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
++.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 -----------~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLE------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CcccCCCCCcHHHHHHHcChHH-HHHHHHH------cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 4667788999999999998876 8999965 578899999999999999999999999999998
Q ss_pred hhhh
Q 003138 729 KINK 732 (845)
Q Consensus 729 kl~~ 732 (845)
+.++
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8653
No 19
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.83 E-value=2.9e-20 Score=178.22 Aligned_cols=149 Identities=18% Similarity=0.115 Sum_probs=120.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.+.|+.|+..|+.++++.||+... .+....+..|+||||+|+..++.++|++||++|++
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~--------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 64 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTE--------NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR------------- 64 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTT--------SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCc--------ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 457899999999999999997531 12234466799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|.||||+|+..|+.+++++|++
T Consensus 65 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 126 (179)
T 3f6q_A 65 -----------INVMNRGDDTPLHLAASHGHRD-IVQKLLQ------YKADINAVNEHGNVPLHYACFWGQDQVAEDLVA 126 (179)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4667889999999999998876 8999965 578899999999999999999999999999988
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
+.++-. + +...+.|+++++...++...+
T Consensus 127 ~ga~~~---------~-----------~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 127 NGALVS---------I-----------CNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp TTCCSS---------B-----------CCTTSCCGGGGSCHHHHHHHH
T ss_pred CCCCcc---------h-----------hccCCCCcHHHHHHHHHHHHH
Confidence 755422 1 334567889998875444333
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=2.4e-20 Score=193.45 Aligned_cols=143 Identities=18% Similarity=0.129 Sum_probs=105.0
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+.+|+.++|++||+.+.+ +...+..|.||||.|+..++.+++++||++|++
T Consensus 88 TpLh~A~~~g~~~~v~~Ll~~~a~---------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-------------- 144 (269)
T 4b93_B 88 SPLHVAALHGRADLIPLLLKHGAN---------AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-------------- 144 (269)
T ss_dssp CHHHHHHHTTCTTHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--------------
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCC---------cCccCCCCCCccccccccChHHHHHHHHHCCCC--------------
Confidence 566666666666666666654321 112234466666666666666666666666654
Q ss_pred hccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 003138 650 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 729 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~k 729 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .||++|.+|..|+||||+|+.+|+.+++++|+++
T Consensus 145 ----------~n~~d~~g~TpL~~A~~~g~~~-~v~~Ll~------~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 207 (269)
T 4b93_B 145 ----------PNKKDLSGNTPLIYACSGGHHE-LVALLLQ------HGASINASNNKGNTALHEAVIEKHVFVVELLLLH 207 (269)
T ss_dssp ----------SCCCCTTCCCHHHHHHHTTCGG-GHHHHHH------TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT
T ss_pred ----------CCCCCCCCCCHHHHHHHCCCHH-HHHHHHH------CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC
Confidence 6788899999999999998876 8999965 5789999999999999999999999999999987
Q ss_pred hhhcCCCCCceEEecCCCcccccccCCCCCCCCcccccccccc
Q 003138 730 INKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTE 772 (845)
Q Consensus 730 l~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~ 772 (845)
.++-. + +...+.|++++++..++
T Consensus 208 Gad~~---------~-----------~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 208 GASVQ---------V-----------LNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp TCCSC---------C-----------CCTTSCCSGGGSCTTCH
T ss_pred CCCCC---------C-----------cCCCCCCHHHHHHhCCc
Confidence 65422 1 33456788999987554
No 21
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=1.7e-20 Score=190.94 Aligned_cols=182 Identities=19% Similarity=0.064 Sum_probs=131.6
Q ss_pred chHHHHHHhC---CCHHHHHHHHHhhhcCC-----cCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC
Q 003138 569 KWLLEFSMEH---DWCAVVKKLLGILFDGT-----VDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK 640 (845)
Q Consensus 569 ~~LL~fAve~---g~~aVVk~LLd~l~~~~-----v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~ 640 (845)
.++||+|+.. |..++++.||+.+.+.+ ++. .....+..|.||||+|++.|+.++|++||++|++++...
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~---~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 131 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA---SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC---CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc---ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccc
Confidence 5899999986 99999999999875421 111 111234579999999999999999999999999865322
Q ss_pred CCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC-
Q 003138 641 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH- 719 (845)
Q Consensus 641 ~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn- 719 (845)
.... ....+.+..+..|.||||+|+..++.+ ++++|++.+ ..|+++|.+|.+|+||||+|+..|+
T Consensus 132 ~~~~----------~~~~~~~~~~~~g~tpL~~A~~~g~~~-~v~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~~ 197 (273)
T 2pnn_A 132 NGDF----------FKKTKGRPGFYFGELPLSLAACTNQLA-IVKFLLQNS---WQPADISARDSVGNTVLHALVEVADN 197 (273)
T ss_dssp CSGG----------GSSCSSSCCCCSCBSHHHHHHHTTCHH-HHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred cccc----------cccccccccccCCCCHHHHHHHcCCHH-HHHHHHhcc---cCCCCceeeCCCCCcHHHHHHHccCc
Confidence 1100 000123444568999999999998876 899997621 0588999999999999999999998
Q ss_pred --------HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 720 --------HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 720 --------~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+++++|+++.++-. .... + .+.+...+.|++|+++..|+...++.+.
T Consensus 198 ~~~~~~~~~~~v~~Ll~~ga~~n-~~~~----~--------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 253 (273)
T 2pnn_A 198 TVDNTKFVTSMYNEILILGAKLH-PTLK----L--------EEITNRKGLTPLALAASSGKIGVLAYIL 253 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC-TTCC----G--------GGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhhhcc-cccc----c--------ccccCCCCCCHHHHHHHhChHHHHHHHH
Confidence 789999988877653 1110 0 1113345678999999977666665543
No 22
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.83 E-value=5e-20 Score=174.70 Aligned_cols=126 Identities=24% Similarity=0.143 Sum_probs=110.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+.+ + ...+..|.||||+|+..++.++|++||++|++
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 94 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGAD--P-------HILAKERESALSLASTGGYTDIVGLLLERDVD------------- 94 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCC--T-------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--c-------hhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-------------
Confidence 4799999999999999999987532 2 23356799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+.+++++|.+
T Consensus 95 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 95 -----------INIYDWNGGTPLLYAVRGNHVK-CVEALLA------RGADLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 4667889999999999998876 8999965 578899999999999999999999999999999
Q ss_pred hhhhcC
Q 003138 729 KINKKS 734 (845)
Q Consensus 729 kl~~~~ 734 (845)
+..+..
T Consensus 157 ~~~~~~ 162 (172)
T 3v30_A 157 HILKLF 162 (172)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 988743
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=5.3e-20 Score=180.39 Aligned_cols=172 Identities=15% Similarity=0.067 Sum_probs=129.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCCCC---CCch
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDK---PGSR 644 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~ga-d~~~~~---~~~~ 644 (845)
.++||+|+..|..++++.||+.+.+ +...+..|.||||+|+..++.++|++|+++++ +.+... ..+.
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L 96 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASAD---------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 96 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHH
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHH
Confidence 5799999999999999999986422 22345679999999999999999999999986 444221 2244
Q ss_pred hhhhhhccCCc------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcC
Q 003138 645 QKQLVDRAGSG------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 718 (845)
Q Consensus 645 ~k~lv~~~~~~------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~G 718 (845)
+.++..+..+. ...++|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|.||||+|+.+|
T Consensus 97 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~ 169 (223)
T 2f8y_A 97 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD-AAVVLLK------NGANKDMQNNREETPLFLAAREG 169 (223)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTCCCHHHHHHHHT
T ss_pred HHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCcCHHHHHHHcC
Confidence 44433222111 12367888999999999999998876 8999965 47889999999999999999999
Q ss_pred CHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 719 HHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 719 n~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
+.+++++|+++.++.. + +...+.|+++++...++...+
T Consensus 170 ~~~~v~~Ll~~ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~i~ 207 (223)
T 2f8y_A 170 SYETAKVLLDHFANRD---------I-----------TDHMDRLPRDIAQERMHHDIV 207 (223)
T ss_dssp CHHHHHHHHHTTCCTT---------C-----------CCTTCCCHHHHHHHTTCHHHH
T ss_pred CHHHHHHHHHcCCCCc---------c-----------ccccCCCHHHHHHHhcchHHH
Confidence 9999999988865432 1 223456789998886444443
No 24
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.82 E-value=3.8e-20 Score=182.34 Aligned_cols=172 Identities=16% Similarity=0.063 Sum_probs=132.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++++.|++.+.+ + ...+..|.||||+|+..++.++|++|+++|++++... ..+++
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 111 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVP--V-------NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLH 111 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--S-------CCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCC--C-------CCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 4799999999999999999986432 2 2345679999999999999999999999999887332 23554
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+.. ..+++.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|.||||+|+.+|+
T Consensus 112 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 112 YAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK-MVHILLF------YKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH-HHHHHHh------cCCCccccCCCCCCHHHHHHHCCC
Confidence 44333321111 1367889999999999999998876 8999964 578899999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
.+++++|+++.++-. + ++..+.|++++++..++....
T Consensus 185 ~~~v~~Ll~~ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 185 VEEAKFLVTQGASIY---------I-----------ENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHHHHHTTCCSC---------C-----------CCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC---------C-----------CCCCCCCHHHHHHhhHHHHHH
Confidence 999999988755422 1 334567889998875444333
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.82 E-value=9.1e-20 Score=178.89 Aligned_cols=167 Identities=17% Similarity=0.061 Sum_probs=127.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchh-hhhccccHHHHHHHcCCHHHHHHHHhcC--CCCCCCC---CC
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYA--PDNVLDK---PG 642 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~-~~~~G~TpLH~AV~~n~~eIVElLL~~g--ad~~~~~---~~ 642 (845)
.++||+|+..|..++++.|++.+...++ .. .+..|.||||+|+..|+.++|++|+++| ++++... ..
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t 109 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMENVNL-------DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT 109 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTTCCG-------GGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhccccccc-------cccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCC
Confidence 4799999999999999999987633332 23 4567999999999999999999999998 6655322 23
Q ss_pred chhhhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcc-cccCCcCCCCCCHHHHHH
Q 003138 643 SRQKQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE-AWKSAQDSTGLTPNDYAS 715 (845)
Q Consensus 643 ~~~k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~g-A~vNakD~~G~TPLHyAa 715 (845)
|.+.++..+..+.. ..++|.++..|.||||+|+..++.+ ++++|++ .| +++|.+|..|+||||+|+
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~d~~g~t~L~~A~ 182 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK-LIELLCG------LGKSAVNWQDKQGWTPLFHAL 182 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH-HHHHHHT------TTCCCSCCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHh------cCcccccCcCCCCCCHHHHHH
Confidence 44444332221111 2368899999999999999998876 8999965 45 789999999999999999
Q ss_pred HcCCHHHHHHHH-HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccc
Q 003138 716 LRAHHSYIHLVQ-RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSL 769 (845)
Q Consensus 716 ~~Gn~e~ieLL~-~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~ 769 (845)
.+|+.+++++|+ ++.++-. + ++..+.|+++++..
T Consensus 183 ~~~~~~~v~~Ll~~~ga~~~---------~-----------~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 183 AEGHGDAAVLLVEKYGAEYD---------L-----------VDNKGAKAEDVALN 217 (228)
T ss_dssp HTTCHHHHHHHHHHHCCCSC---------C-----------BCTTSCBGGGGCSS
T ss_pred HcCCHHHHHHHHHhcCCCCC---------c-----------cCCCCCcHHHHHHH
Confidence 999999999888 6555422 1 33356678888866
No 26
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=2.9e-20 Score=187.24 Aligned_cols=148 Identities=23% Similarity=0.156 Sum_probs=115.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCC-----------
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV----------- 637 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~----------- 637 (845)
.++||+|+..|+.++++.||+.+.+ + ...+..|+||||+|++.++.++|++|++++++..
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~~ga~--~-------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 46 QTALHLAAILGEASTVEKLYAAGAG--V-------LVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--S-------SCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--C-------CCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 4899999999999999999986532 2 2335678999999999999999999999876521
Q ss_pred ------------------------------------C---CCCCchhhhhhhccCCcc------cccCCCCCCC-CChHH
Q 003138 638 ------------------------------------L---DKPGSRQKQLVDRAGSGF------IFKPNVIGPA-GLTPL 671 (845)
Q Consensus 638 ------------------------------------~---~~~~~~~k~lv~~~~~~~------~f~pNa~g~~-G~TPL 671 (845)
. .+..|++.++..+..+.+ ..++|.++.. |.|||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 1 112244444333221111 1367887754 99999
Q ss_pred HHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 672 HVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 672 HiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
|+|+..++.+ ++++|++ .||++|.+|..|+||||+|+.+|+.+++++|+++.++
T Consensus 197 ~~A~~~~~~~-~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 250 (282)
T 1oy3_D 197 HLAVEAQAAS-VLELLLK------AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250 (282)
T ss_dssp HHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHH-HHHHHHH------cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCC
Confidence 9999998876 8999965 5789999999999999999999999999999998776
No 27
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.82 E-value=6.6e-20 Score=171.44 Aligned_cols=119 Identities=20% Similarity=0.163 Sum_probs=104.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.|++.+. ++...+..|.||||+|+..++.++|++|+++|++
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 92 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGV---------SRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD------------- 92 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTC---------CTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-------------
Confidence 479999999999999999997642 2223456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+.+++++|+
T Consensus 93 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 93 -----------VNAKDMLKMTALHWATEHNHQE-VVELLIK------YGADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 5677889999999999998876 8999965 57889999999999999999999999999873
No 28
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=9.7e-20 Score=171.93 Aligned_cols=126 Identities=22% Similarity=0.157 Sum_probs=110.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+.+ + ...+..|.||||+|+..++.++|++|+++|++
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 94 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNGAD--P-------QLLGKGRESALSLACSKGYTDIVKMLLDCGVD------------- 94 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC--T-------TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-------------
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC--C-------CCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 4799999999999999999986432 2 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|.+|+||||+|+.+|+.+++++|.+
T Consensus 95 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 95 -----------VNEYDWNGGTPLLYAVHGNHVK-CVKMLLE------SGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred -----------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 4667889999999999998876 8999964 578899999999999999999999999999999
Q ss_pred hhhhcC
Q 003138 729 KINKKS 734 (845)
Q Consensus 729 kl~~~~ 734 (845)
+..+..
T Consensus 157 ~~~~~~ 162 (167)
T 3v31_A 157 HLLKLL 162 (167)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 987643
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.82 E-value=1e-19 Score=179.55 Aligned_cols=154 Identities=21% Similarity=0.176 Sum_probs=102.2
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+..|..++++.|++.+....+ +....+..|.||||+|++.++.++|++|+++|++
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------------- 141 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTL-----DLEARNYDGLTALHVAVNTECQETVQLLLERGAD-------------- 141 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSC-----CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--------------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccc-----cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 455555555555555555544321111 1112233455555555555555555555555443
Q ss_pred hccCCcccccCCCCC-CCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 650 DRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g-~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
++..+ ..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 142 ----------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 142 ----------IDAVDIKSGRSPLIHAVENNSLS-MVQLLLQ------HGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp ----------TTCCCTTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred ----------cccccccCCCcHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 55666 68999999999998876 8999965 578899999999999999999999999999998
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhh
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~ 779 (845)
+.++-. + +...+.|++++++..++...++.+
T Consensus 205 ~ga~~~---------~-----------~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 205 SGADSS---------L-----------KNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp TTCCTT---------C-----------CCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred cCCCCC---------C-----------cCCCCCCHHHHHHhcCcHHHHhhh
Confidence 765432 1 334567889999997666665444
No 30
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=5.4e-20 Score=172.08 Aligned_cols=123 Identities=21% Similarity=0.204 Sum_probs=105.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+. |..++++.|++.+. ++ ...+..|.||||+|+++++.++|++||++|++
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~--~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 95 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGA--NP-------DLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD------------- 95 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTC--CT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCC--CC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 579999999 99999999998642 22 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccc-cCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-KSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~-vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++ ++.+|..|+||||+|+.+|+.+++++|+
T Consensus 96 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 96 -----------VNIEDNEGNLPLHLAAKEGHLR-VVEFLVK------HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------HSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------ccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 5677889999999999998876 8999965 4666 6999999999999999999999999999
Q ss_pred Hhhhh
Q 003138 728 RKINK 732 (845)
Q Consensus 728 ~kl~~ 732 (845)
++.++
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 88653
No 31
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=8.3e-20 Score=185.84 Aligned_cols=169 Identities=14% Similarity=-0.018 Sum_probs=129.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--Cchhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKP--GSRQK 646 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~--~~~~k 646 (845)
.++||+|+..|..++++.||+.+. ++ +..+..|.||||+|+..|+.++|++|+++|++.+.+.. .+.+.
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~--~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 107 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGA--QV-------NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHE 107 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC--CC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 479999999999999999998642 22 24466799999999999999999999999998774432 34444
Q ss_pred hhhhccCCc------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCH
Q 003138 647 QLVDRAGSG------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 720 (845)
Q Consensus 647 ~lv~~~~~~------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~ 720 (845)
++..+..+. ...++|.++..|.||||+|+..++.+ ++++|++ .|+++|. |..|.||||+|+.+|+.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 108 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLE------SGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHH------HTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred HHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHH-HHHHHHH------cCCCCCC-CCCCCChHHHHHHcCCH
Confidence 433322111 12367888999999999999998776 8999964 5788885 89999999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccch
Q 003138 721 SYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKI 774 (845)
Q Consensus 721 e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~ 774 (845)
+++++|+++.++-. + ++..+.|+++++...+...
T Consensus 180 ~~v~~Ll~~gad~~---------~-----------~d~~g~tpl~~A~~~~~~~ 213 (261)
T 2xai_A 180 ELACLLMDFGADTQ---------A-----------KNAEGKRPVELVPPESPLA 213 (261)
T ss_dssp HHHHHHHHTTCCTT---------C-----------CCTTSCCGGGGSCTTCTHH
T ss_pred HHHHHHHHcCCCCC---------C-----------cCCCCCChhhhccccccHH
Confidence 99999988865432 1 3346678899888755433
No 32
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.81 E-value=1e-19 Score=175.59 Aligned_cols=175 Identities=16% Similarity=0.011 Sum_probs=130.9
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQK 646 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~k 646 (845)
++|++|+..|..++++.||... ..+++..+..|.||||+|++.|+.++|++||++|++++... ..|.+.
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDT--------TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLY 78 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCT--------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cHHHHHHHhccHHHHHHHHHcC--------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 6899999999999999999643 11333446679999999999999999999999999887432 224444
Q ss_pred hhhhccCCc-------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcc-cccCCcCCCCCCHHHHHHHcC
Q 003138 647 QLVDRAGSG-------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIE-AWKSAQDSTGLTPNDYASLRA 718 (845)
Q Consensus 647 ~lv~~~~~~-------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~g-A~vNakD~~G~TPLHyAa~~G 718 (845)
++..+..+. ...+++.++..|.||||+|+..++.+ ++++|++ .| +++|.+|..|+||||+|+..|
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID-NVKLLLE------DGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHH-HHHHHHH------HCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHH-HHHHHHH------cCCCCcCCCCCCCCCHHHHHHHhc
Confidence 433222111 12257888899999999999998775 8999865 34 788999999999999999988
Q ss_pred C-----HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhh
Q 003138 719 H-----HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 719 n-----~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~ 779 (845)
+ .+++++|+++.++-. + +...+.|+++++...++...++.+
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~---------~-----------~~~~g~t~l~~A~~~~~~~~~~~L 197 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQS---------I-----------KDNSGRTAMDYANQKGYTEISKIL 197 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTT---------C-----------CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCCCC---------c-----------cCCCCCCHHHHHHHcCCHhHHHHH
Confidence 7 888888887755422 1 223456889999887666665544
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.81 E-value=4.2e-20 Score=195.66 Aligned_cols=148 Identities=15% Similarity=0.099 Sum_probs=115.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCC-CCCCchhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVL-DKPGSRQKQ 647 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~-~~~~~~~k~ 647 (845)
.++||+|+..|+.++|+.||+.+. + ++..+..|.||||+|++.|+.++|++||++|++.+. +...+++.+
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~--~-------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGV--S-------PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTC--C-------TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC--C-------ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence 589999999999999999998642 2 234466799999999999999999999999997764 333454443
Q ss_pred hhhccCCcc---------------------------cccCCCCCCCCChHHHHHHhCC--ChHHHHHHhhcCCCCCCccc
Q 003138 648 LVDRAGSGF---------------------------IFKPNVIGPAGLTPLHVAACRD--DAENVLDALTDDPGSVGIEA 698 (845)
Q Consensus 648 lv~~~~~~~---------------------------~f~pNa~g~~G~TPLHiAA~~~--~~e~VvelLl~~p~~ig~gA 698 (845)
+..+..+.. .+.++.++..|.||||+|+..+ +.+ ++++|++ .|+
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~-~v~~Ll~------~ga 164 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLE-MIKILVQ------LGA 164 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHH-HHHHHHH------HTC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHH-HHHHHHH------cCC
Confidence 332211111 1123337889999999999998 665 8999964 578
Q ss_pred ccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 699 WKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 699 ~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
++|.+|..|+||||+|+.+|+.+++++|+++..+
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 9999999999999999999999999999988655
No 34
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=1.2e-19 Score=169.02 Aligned_cols=120 Identities=23% Similarity=0.260 Sum_probs=104.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+ +..|+.++++.|++.+.+ +...+..|.||||+|++.|+.++|++|+++|++
T Consensus 37 ~t~L~~-~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 93 (156)
T 1bd8_A 37 KTALQV-MMFGSTAIALELLKQGAS---------PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD------------- 93 (156)
T ss_dssp CCHHHH-SCTTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CcHHHH-HHcCCHHHHHHHHHCCCC---------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 589999 999999999999986422 223466799999999999999999999999976
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.+|..|.||||+|+..++.+ ++++|++ . ++++.+|.+|.||||+|+.+|+.+++++|.+
T Consensus 94 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 94 -----------VNVPDGTGALPIHLAVQEGHTA-VVSFLAA------E-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp -----------SCCCCTTSCCHHHHHHHHTCHH-HHHHHHT------T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred -----------CCCcCCCCCcHHHHHHHhChHH-HHHHHHh------c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 5677889999999999998876 8999965 3 6789999999999999999999999999987
Q ss_pred hh
Q 003138 729 KI 730 (845)
Q Consensus 729 kl 730 (845)
++
T Consensus 155 ~~ 156 (156)
T 1bd8_A 155 HM 156 (156)
T ss_dssp TC
T ss_pred hC
Confidence 63
No 35
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=186.83 Aligned_cols=170 Identities=16% Similarity=0.032 Sum_probs=130.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+. ++ +..+..|+||||+|+..|+.++|++||++|++
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~--~~-------~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~------------- 79 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMN--DP-------SQPNEEGITALHNAICGANYSIVDFLITAGAN------------- 79 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSS--CT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCC--CC-------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 379999999999999999998653 22 23466799999999999999999999999976
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcC-CCCCCHHHHH--HHcCCHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA--SLRAHHSYIHL 725 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD-~~G~TPLHyA--a~~Gn~e~ieL 725 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|+++|.+| .+|+||||+| +..|+.+++++
T Consensus 80 -----------~n~~d~~g~tpLh~A~~~g~~~-~v~~Ll~------~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~ 141 (229)
T 2vge_A 80 -----------VNSPDSHGWTPLHCAASCNDTV-ICMALVQ------HGAAIFATTLSDGATAFEKCDPYREGYADCATY 141 (229)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHT------TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCcccccCCCCCCHHHHHHHHhcChHHHHHH
Confidence 5677889999999999998876 8999964 578999997 5999999999 99999999999
Q ss_pred HHHhhhhcCC--CCCceEEecCCCcc----------cccccCCCCCCCCccccccccccchhhhh
Q 003138 726 VQRKINKKSS--ESGRVILDIPGSIV----------DWDSKQKPLKGNKSSRVLSLQTEKITTKV 778 (845)
Q Consensus 726 L~~kl~~~~~--~~~~v~l~I~~~~~----------~~~~~~k~~~~~~~~~i~~~~~~~~~~~~ 778 (845)
|+++.++-.. .++...+....... +.+.+.+...+.|++++++..|+...++.
T Consensus 142 Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~ 206 (229)
T 2vge_A 142 LADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPR 206 (229)
T ss_dssp HHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEG
T ss_pred HHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcceeeh
Confidence 9998665210 12222221111100 11133444567889999999887776643
No 36
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.81 E-value=1.4e-19 Score=178.49 Aligned_cols=180 Identities=18% Similarity=0.128 Sum_probs=134.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC-C--Cchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK-P--GSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~-~--~~~~ 645 (845)
.++||+|+.+|..++++.|++.+..... +....+..|+||||+|+..|+.++|++|+++|++.+... . .+.+
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGR-----ELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH 84 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTC-----CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCC-----CCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 4799999999999999999986543222 223446679999999999999999999999999877332 2 2444
Q ss_pred hhhhhccCCcc----------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcC-CCCCCHHHHH
Q 003138 646 KQLVDRAGSGF----------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQD-STGLTPNDYA 714 (845)
Q Consensus 646 k~lv~~~~~~~----------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD-~~G~TPLHyA 714 (845)
.++..+..+.+ .++++..+..|.||||+|+..++.+ ++++|++ .|++++.+| ..|.||||+|
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE-TVQLLLE------RGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTTCCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHH-HHHHHHH------cCCCcccccccCCCcHHHHH
Confidence 43322211111 1257888899999999999998776 8999965 478889999 8899999999
Q ss_pred HHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 715 SLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 715 a~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
+.+|+.+++++|+++..+-. .+...+.|++|+++..++...++.+.
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~--------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll 203 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVN--------------------AQMYSGSSALHSASGRGLLPLVRTLV 203 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTT--------------------CBCTTSCBHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCC--------------------CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999988754322 12234578899999876666665544
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.81 E-value=1.7e-19 Score=174.30 Aligned_cols=122 Identities=23% Similarity=0.202 Sum_probs=107.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.|++.+.+ + ...+..|.||||+|+..++.++|++|+++|++
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 126 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKGSN--V-------NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN------------- 126 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCC--T-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCCC--C-------CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------------
Confidence 4799999999999999999987532 2 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+.+++++|.+
T Consensus 127 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 127 -----------VNDRNLEGETPLIVASKYGRSE-IVKKLLE------LGADISARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp -----------SSCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 5677889999999999998876 8999964 578899999999999999999999999999987
Q ss_pred hh
Q 003138 729 KI 730 (845)
Q Consensus 729 kl 730 (845)
..
T Consensus 189 ~~ 190 (192)
T 2rfm_A 189 VR 190 (192)
T ss_dssp HH
T ss_pred cc
Confidence 63
No 38
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=1.9e-19 Score=171.39 Aligned_cols=121 Identities=26% Similarity=0.211 Sum_probs=106.2
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+.+ + ...+..|.||||+|+..++.++|++|+++|++
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 105 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGAD--V-------NAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD------------- 105 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC--T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--C-------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 4799999999999999999986422 2 23456799999999999999999999999976
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+.+++++|++
T Consensus 106 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 106 -----------VNANDMEGHTPLHLAAMFGHLE-IVEVLLK------NGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred -----------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 4667789999999999998876 8999965 578899999999999999999999999999986
Q ss_pred h
Q 003138 729 K 729 (845)
Q Consensus 729 k 729 (845)
+
T Consensus 168 ~ 168 (169)
T 2y1l_E 168 L 168 (169)
T ss_dssp C
T ss_pred c
Confidence 4
No 39
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=2.7e-20 Score=175.32 Aligned_cols=124 Identities=22% Similarity=0.180 Sum_probs=106.7
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.++||+|+..|..++++.||+.+. +++..+..|+||||+|+ +|+.++|++||++|++
T Consensus 12 ~~t~L~~A~~~g~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~------------ 69 (156)
T 1bi7_B 12 SADWLATAAARGRVEEVRALLEAGA---------NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE------------ 69 (156)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTC---------CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC------------
T ss_pred chHHHHHHHHcCCHHHHHHHHHcCC---------CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC------------
Confidence 3589999999999999999997642 22234667999999995 9999999999999876
Q ss_pred hhhccCCcccccCCCCCCCCCh-HHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLT-PLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~T-PLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.++..|.| |||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|
T Consensus 70 ------------~~~~d~~g~ttpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 70 ------------PNCADPATLTRPVHDAAREGFLD-TLVVLHR------AGARLDVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp ------------CCCCCTTTCCCHHHHHHHHTCHH-HHHHHHH------HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred ------------CCCcCCCCCcHHHHHHHHCCCHH-HHHHHHH------cCCCCcccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 5677889999 999999998876 8999964 5889999999999999999999999999999
Q ss_pred HHhhhh
Q 003138 727 QRKINK 732 (845)
Q Consensus 727 ~~kl~~ 732 (845)
+++.++
T Consensus 131 l~~ga~ 136 (156)
T 1bi7_B 131 RAAAGG 136 (156)
T ss_dssp SSCC--
T ss_pred HHcCCC
Confidence 888665
No 40
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=1.1e-19 Score=182.93 Aligned_cols=137 Identities=18% Similarity=0.071 Sum_probs=108.5
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCC-----CCchhhhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCC
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLD 639 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~-----~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~---~gad~~~~ 639 (845)
-.++||+|+.+|+.++|++||+.+.+.+....+ .+....+..|+||||+|+..|+.++|++||+ +|++
T Consensus 93 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~---- 168 (260)
T 3jxi_A 93 GQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD---- 168 (260)
T ss_dssp SBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----
Confidence 358999999999999999999975332211000 0000001469999999999999999999999 7765
Q ss_pred CCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCCh--------HHHHHHhhcCCCCCCccccc-------CCcC
Q 003138 640 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWK-------SAQD 704 (845)
Q Consensus 640 ~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~--------e~VvelLl~~p~~ig~gA~v-------NakD 704 (845)
+|.+|..|+||||+|+..++. .+++++|++ .||++ |.+|
T Consensus 169 --------------------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~------~ga~~~~~~~~~~~~d 222 (260)
T 3jxi_A 169 --------------------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI------KCAKLFPDTNLEALLN 222 (260)
T ss_dssp --------------------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH------HHHHHCTTCCGGGCCC
T ss_pred --------------------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH------hCcccccccchhhccc
Confidence 577888999999999987652 248999954 67888 7899
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhhcC
Q 003138 705 STGLTPNDYASLRAHHSYIHLVQRKINKKS 734 (845)
Q Consensus 705 ~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~ 734 (845)
.+|+||||+|+.+|+.+++++|+++..+..
T Consensus 223 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 223 NDGLSPLMMAAKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcc
Confidence 999999999999999999999999987643
No 41
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=2e-19 Score=183.99 Aligned_cols=165 Identities=17% Similarity=0.041 Sum_probs=123.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC-C--Cchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK-P--GSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~-~--~~~~ 645 (845)
.++||+|+..|+.++++.||+.+. ++ +..+..|.||||+|+..|+.++|++||++|++.+... . .+++
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga--~~-------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 144 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGA--NI-------NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLD 144 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTC--CT-------TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC--CC-------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 489999999999999999998652 22 2345679999999999999999999999999877332 2 2332
Q ss_pred hhhhhccCCc-------c--------------------------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCC
Q 003138 646 KQLVDRAGSG-------F--------------------------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPG 692 (845)
Q Consensus 646 k~lv~~~~~~-------~--------------------------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~ 692 (845)
.++..+.... . .......+..|.||||+|+..++.+ ++++|++
T Consensus 145 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~--- 220 (299)
T 1s70_B 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTE-VLKLLIQ--- 220 (299)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHH-HHHHHHT---
T ss_pred HHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHH-HHHHHHH---
Confidence 2211110000 0 0112335678999999999998876 8999964
Q ss_pred CCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccc
Q 003138 693 SVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSL 769 (845)
Q Consensus 693 ~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~ 769 (845)
.|+++|.+|.+|+||||+|+.+|+.+++++|+++.++-. + ++..+.|+++++..
T Consensus 221 ---~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~---------~-----------~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 221 ---ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME---------A-----------VNKVGQTAFDVADE 274 (299)
T ss_dssp ---TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCTTTSCCS
T ss_pred ---cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCC---------C-----------cCCCCCCHHHHHHH
Confidence 578999999999999999999999999999998865432 1 33456788888876
No 42
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=184.01 Aligned_cols=174 Identities=12% Similarity=0.017 Sum_probs=131.2
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++++.||+.+. ++ +..+..|.||||+|++.|+.++|++||++|++++... ..|.+
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~--~~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 74 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGW--AV-------NIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 74 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CS-------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC--CC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 379999999999999999998642 22 2345679999999999999999999999999987433 23555
Q ss_pred hhhhhccCCccc------ccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGFI------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~~------f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+... .+++. +..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|.||||+|+.+|+
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVE-CVNSLIA------YGGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHH-HHHHHHH------cCCCCCcCCCCCCCHHHHHHHhCC
Confidence 444333222111 13443 446999999999998876 8999965 578899999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+++++|+++..+-. ....+.|++|+++..++...++.+.
T Consensus 147 ~~~v~~Ll~~g~~~~---------------------~~~~g~t~Lh~A~~~~~~~~v~~Ll 186 (261)
T 2xai_A 147 RACVKKLLESGADVN---------------------QGKGQDSPLHAVARTASEELACLLM 186 (261)
T ss_dssp HHHHHHHHHHTCCTT---------------------CCBTTBCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCC---------------------CCCCCCChHHHHHHcCCHHHHHHHH
Confidence 999999988754321 0124568899999876666665554
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.80 E-value=1.5e-19 Score=179.75 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=126.2
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+. ++...+..|+||||+|++.++.++|++|++++++...
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---------- 106 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGC---------DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL---------- 106 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCC---------CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSS----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhH----------
Confidence 589999999999999999997542 2233456799999999999999999999999876321
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCC-CCCCHHHHHHHcCCHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~-~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
....+..+..|.||||+|+..++.+ ++++|++ .|+++|.+|. .|+||||+|+..|+.+++++|+
T Consensus 107 --------~~~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 171 (236)
T 1ikn_D 107 --------HSILKATNYNGHTCLHLASIHGYLG-IVELLVS------LGADVNAQEPCNGRTALHLAVDLQNPDLVSLLL 171 (236)
T ss_dssp --------SCGGGCCCTTCCCHHHHHHHTTCHH-HHHHHHH------HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred --------HHHhhccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 1124677889999999999998876 8999964 5788999998 9999999999999999999998
Q ss_pred HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 728 RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 728 ~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
++.++-. + +...+.|+++++...++...++.+..
T Consensus 172 ~~ga~~~---------~-----------~~~~g~tpl~~A~~~~~~~~~~~Ll~ 205 (236)
T 1ikn_D 172 KCGADVN---------R-----------VTYQGYSPYQLTWGRPSTRIQQQLGQ 205 (236)
T ss_dssp TTTCCSC---------C-----------CCTTCCCGGGGCTTSSCHHHHHHHHT
T ss_pred HcCCCCC---------c-----------ccCCCCCHHHHHHccCchHHHHHHHH
Confidence 8755422 1 23356788999988776666655544
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.80 E-value=2.3e-19 Score=177.48 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=112.9
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++++.|++.+.+ + ...+..|.||||+|+..|+.++|++|+++|++.+... ..+.+
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 82 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGAN--I-------DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLH 82 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--T-------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCC--c-------CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHH
Confidence 4799999999999999999986532 2 2335568999999999999999999999998876332 22444
Q ss_pred hhhhhccCCc-------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcC
Q 003138 646 KQLVDRAGSG-------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 718 (845)
Q Consensus 646 k~lv~~~~~~-------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~G 718 (845)
.++..+..+. ...+++..+..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~ 155 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVD-LVKLLLS------KGSDINIRDNEENICLHWAAFSG 155 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCccCCCCCCHHHHHHHCC
Confidence 4333221111 11357788889999999999988775 8898864 46788999999999999999999
Q ss_pred CHHHHHHHHHhhhh
Q 003138 719 HHSYIHLVQRKINK 732 (845)
Q Consensus 719 n~e~ieLL~~kl~~ 732 (845)
+.+++++|+++..+
T Consensus 156 ~~~~~~~Ll~~g~~ 169 (237)
T 3b7b_A 156 CVDIAEILLAAKCD 169 (237)
T ss_dssp CHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999988877543
No 45
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=9.8e-20 Score=171.56 Aligned_cols=122 Identities=23% Similarity=0.170 Sum_probs=105.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+. ++...+..|+||||+|++.++.++|++|+++|++
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 100 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGA---------DVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV------------- 100 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcChHHHHHHHHhcCC---------CCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-------------
Confidence 489999999999999999998642 2234466799999999999999999999999976
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|++++.+|.+|+||||+|+. |+.+++++|.+
T Consensus 101 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 101 -----------VNVADLWKFTPLHEAAAKGKYE-ICKLLLQ------HGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 4667889999999999998876 8999965 578899999999999999876 99999999987
Q ss_pred hhh
Q 003138 729 KIN 731 (845)
Q Consensus 729 kl~ 731 (845)
+.+
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 643
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=2.4e-19 Score=175.89 Aligned_cols=177 Identities=15% Similarity=-0.036 Sum_probs=130.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCC--C----CCCC
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV--L----DKPG 642 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~--~----~~~~ 642 (845)
+++||+|+..|..++++.||+...... ...+..|.||||+|++.|+.++|++|+++|++.+ . ....
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t 74 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLL--------LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWT 74 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCC
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCcccc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCC
Confidence 479999999999999999998653211 1235679999999999999999999999995443 2 1123
Q ss_pred chhhhhhhcc--------CCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHH
Q 003138 643 SRQKQLVDRA--------GSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYA 714 (845)
Q Consensus 643 ~~~k~lv~~~--------~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyA 714 (845)
+++.++..+. ......+++.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|
T Consensus 75 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 75 PFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE-VSQFLIE------NGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp HHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHh-HHHHHHH------cCCCccccCCCCCCHHHHH
Confidence 4444433221 11122467888899999999999998776 8999965 4788999999999999999
Q ss_pred HHcCCHHHHHHHHHhh-hhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 715 SLRAHHSYIHLVQRKI-NKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 715 a~~Gn~e~ieLL~~kl-~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
+.+|+.+++++|+++. .+-. .+...+.|++|++...++...++.+.
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~--------------------~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVN--------------------WQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSC--------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcCccccc--------------------CcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999998765 3211 12335668899999876655554443
No 47
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=3.4e-19 Score=184.17 Aligned_cols=148 Identities=23% Similarity=0.141 Sum_probs=110.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC-C------
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK-P------ 641 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~-~------ 641 (845)
.++||+|+..|+.++++.||+.+.+ +...+..|.||||+|++.++.++|++||++|++.+... .
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~ 162 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHGAC---------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVD 162 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchH
Confidence 4788888888888888888876422 22335668899999999999999999999988765321 1
Q ss_pred --------------------------------------------------CchhhhhhhccCC---c------ccccCCC
Q 003138 642 --------------------------------------------------GSRQKQLVDRAGS---G------FIFKPNV 662 (845)
Q Consensus 642 --------------------------------------------------~~~~k~lv~~~~~---~------~~f~pNa 662 (845)
.+++.++...... . ...++|.
T Consensus 163 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~ 242 (351)
T 3utm_A 163 MAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNE 242 (351)
T ss_dssp HCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTC
T ss_pred HHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCC
Confidence 1122211110000 0 1236788
Q ss_pred CCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 663 IGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 663 ~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|+++.++
T Consensus 243 ~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad 305 (351)
T 3utm_A 243 KNKDFMTPLHVAAERAHND-VMEVLHK------HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred cCCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8999999999999998875 8999964 5788999999999999999999999999999888665
No 48
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=3.7e-19 Score=184.13 Aligned_cols=133 Identities=21% Similarity=0.136 Sum_probs=102.9
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhh-cCCc-CCCCCCch----------------------------hhhhccccHHHHHH
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILF-DGTV-DTGDHTSS----------------------------ELAILEMGLLHKAV 618 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~-~~~v-~~~~~s~~----------------------------~~~~~G~TpLH~AV 618 (845)
.++||+|+..|+.++++.||+.+. ..+. +..+..+. ..+..|+||||+|+
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~ 191 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAV 191 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 489999999999999999999764 2211 11111111 11233667777777
Q ss_pred HcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCccc
Q 003138 619 RRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEA 698 (845)
Q Consensus 619 ~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA 698 (845)
++|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|++. .|+
T Consensus 192 ~~g~~~~v~~Ll~~gad------------------------~n~~d~~G~TpLh~A~~~g~~~-iv~~Ll~~-----~ga 241 (276)
T 4hbd_A 192 SHGRVDVVKALLACEAD------------------------VNVQDDDGSTALMCACEHGHKE-IAGLLLAV-----PSC 241 (276)
T ss_dssp HTTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHTS-----TTC
T ss_pred HcCCHHHHHHHHhCCCC------------------------CCCCCCCCCCHHHHHHHCCCHH-HHHHHHhc-----CCC
Confidence 77777777777777765 6778889999999999998876 89999652 478
Q ss_pred ccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 003138 699 WKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 731 (845)
Q Consensus 699 ~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~ 731 (845)
++|.+|.+|+||||+|+.+|+.+++++|+++.+
T Consensus 242 d~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 242 DISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 899999999999999999999999999988764
No 49
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.79 E-value=2.5e-19 Score=180.34 Aligned_cols=132 Identities=19% Similarity=0.141 Sum_probs=106.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCC------chhhhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCC
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHT------SSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLD 639 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s------~~~~~~~G~TpLH~AV~~n~~eIVElLL~---~gad~~~~ 639 (845)
.++||+|+..|+.++++.||+.+.+ ++..... ....+..|+||||+|+..|+.++|++||+ +|++
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~---- 164 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGAD--VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS---- 164 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----
Confidence 5899999999999999999987533 3211000 00011239999999999999999999999 7775
Q ss_pred CCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHh--CCChH------HHHHHhhcCCCCCCccccc-------CCcC
Q 003138 640 KPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC--RDDAE------NVLDALTDDPGSVGIEAWK-------SAQD 704 (845)
Q Consensus 640 ~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~--~~~~e------~VvelLl~~p~~ig~gA~v-------NakD 704 (845)
+|.+|..|+||||+|+. .++.+ +++++|++ .||++ |.+|
T Consensus 165 --------------------~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~------~ga~~~~~~~~~~~~d 218 (256)
T 2etb_A 165 --------------------LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQ------MGARLCPTVQLEEISN 218 (256)
T ss_dssp --------------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH------HHHHHSTTCCGGGCCC
T ss_pred --------------------cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH------cCCCcccccccccccC
Confidence 57788899999999998 54432 28999954 68888 9999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 705 STGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 705 ~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
..|+||||+|+.+|+.+++++|+++..+
T Consensus 219 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 219 HQGLTPLKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999999999999999999998765
No 50
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=3e-19 Score=161.50 Aligned_cols=115 Identities=18% Similarity=0.109 Sum_probs=97.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+. + ++..+..|+||||+|++.++.++|++||++|++
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~--~-------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 65 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGE--D-------VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------------- 65 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTC--C-------TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-------------
T ss_pred chHHHHHHHcCCHHHHHHHHHcCC--C-------cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999998642 2 224456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.+|..|+||||+|+..++.+ ++++|++ .|++++.+|.+|+||||+|+ +.++.++|
T Consensus 66 -----------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 66 -----------INAPDKHHITPLLSAVYEGHVS-CVKLLLS------KGADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp -----------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred -----------CCcCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 5677889999999999998876 8999965 57889999999999999995 44455554
No 51
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=1.3e-19 Score=179.02 Aligned_cols=128 Identities=9% Similarity=-0.016 Sum_probs=107.0
Q ss_pred chHHHHHHhCCCH----HHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCC------HHHHHHHHhcCCCCCC
Q 003138 569 KWLLEFSMEHDWC----AVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC------RPMVELLLNYAPDNVL 638 (845)
Q Consensus 569 ~~LL~fAve~g~~----aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~------~eIVElLL~~gad~~~ 638 (845)
+++||+|+.+|.. +++++||+.+. ++ +.++..|+||||+|+..++ .++|++||++|+|
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga--dv-------n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad--- 106 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKGA--DI-------KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD--- 106 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTTC--CS-------SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC---
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCCC--CC-------CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC---
Confidence 4899999999975 48999998653 23 3446779999999999987 6889999999987
Q ss_pred CCCCchhhhhhhccCCcccccCCCCCCCCC-hHHHHHHhCCCh----HHHHHHhhcCCCCCCcccccCCcCCCCCCHHHH
Q 003138 639 DKPGSRQKQLVDRAGSGFIFKPNVIGPAGL-TPLHVAACRDDA----ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 713 (845)
Q Consensus 639 ~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~-TPLHiAA~~~~~----e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHy 713 (845)
+|.+|..|. ||||+|+..+.. .+++++|++. .||++|.+|..|+|||||
T Consensus 107 ---------------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~-----~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 107 ---------------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ-----SGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp ---------------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS-----TTCCTTCCCTTSCCHHHH
T ss_pred ---------------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh-----cCCCCcccCCCCCCHHHH
Confidence 577888999 999999985432 2488999641 589999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhhcC
Q 003138 714 ASLRAHHSYIHLVQRKINKKS 734 (845)
Q Consensus 714 Aa~~Gn~e~ieLL~~kl~~~~ 734 (845)
|+..|+.+++++|...+.+..
T Consensus 161 A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHHh
Confidence 999999999999998877643
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=2.5e-19 Score=182.37 Aligned_cols=134 Identities=17% Similarity=0.114 Sum_probs=107.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCC-----CCchhhhhccccHHHHHHHcCCHHHHHHHHh---cCCCCCCCC
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGD-----HTSSELAILEMGLLHKAVRRNCRPMVELLLN---YAPDNVLDK 640 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~-----~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~---~gad~~~~~ 640 (845)
.++||+|+..|+.+++++||+.+.+.+....+ ......+..|.||||+|+..|+.++|++||+ +|++
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad----- 176 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD----- 176 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-----
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-----
Confidence 58999999999999999999975332221000 0000111269999999999999999999999 7775
Q ss_pred CCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCCh--------HHHHHHhhcCCCCCCcccccC-------CcCC
Q 003138 641 PGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA--------ENVLDALTDDPGSVGIEAWKS-------AQDS 705 (845)
Q Consensus 641 ~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~--------e~VvelLl~~p~~ig~gA~vN-------akD~ 705 (845)
+|.+|..|+||||+|+..++. .+++++|++ .||++| .+|.
T Consensus 177 -------------------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~------~ga~~n~~~~~~~~~d~ 231 (273)
T 2pnn_A 177 -------------------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI------LGAKLHPTLKLEEITNR 231 (273)
T ss_dssp -------------------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH------HHHHHCTTCCGGGCCCT
T ss_pred -------------------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHH------hhhhcccccccccccCC
Confidence 577888999999999998762 348999954 678887 4999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 706 TGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 706 ~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
+|+||||+|+.+|+.+++++|+++.++
T Consensus 232 ~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 232 KGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 999999999999999999999999885
No 53
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=4.7e-19 Score=183.52 Aligned_cols=164 Identities=14% Similarity=-0.022 Sum_probs=126.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCC--Cchhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKP--GSRQK 646 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~--~~~~k 646 (845)
.++||+|+..|+.++++.||+.+. ++ ...+..|.||||+|+..++.++|++|+++|++.+.+.. .+++.
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga--~~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~ 163 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGA--QV-------NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHE 163 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC--CS-------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHH
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCC--CC-------CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHH
Confidence 489999999999999999998642 22 23466799999999999999999999999998774433 34444
Q ss_pred hhhhccCCc------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCH
Q 003138 647 QLVDRAGSG------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 720 (845)
Q Consensus 647 ~lv~~~~~~------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~ 720 (845)
++..+..+. ...++|.++..|.||||+|+..++.+ ++++|++ .|+++|. |..|.||||+|+.+|+.
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~-~~~g~t~L~~A~~~~~~ 235 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA-CVKKLLE------SGADVNQ-GKGQDSPLHAVVRTASE 235 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH-HHHHHHH------TTCCTTC-CBTTBCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH-HHHHHHH------CCCCCCC-CCCCCCHHHHHHHcCCH
Confidence 433322111 12367888999999999999998876 8999965 4677884 89999999999999999
Q ss_pred HHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccc
Q 003138 721 SYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSL 769 (845)
Q Consensus 721 e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~ 769 (845)
+++++|+++.++.. .++..+.|++++++.
T Consensus 236 ~~v~~Ll~~gad~~--------------------~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 236 ELACLLMDFGADTQ--------------------AKNAEGKRPVELVPP 264 (285)
T ss_dssp HHHHHHHHTTCCTT--------------------CCCTTSCCGGGGSCT
T ss_pred HHHHHHHHCCCCCC--------------------CcCCCCCCHHHHhcC
Confidence 99999988755422 134466788999885
No 54
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=1.2e-19 Score=183.06 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=98.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||.|+..+..++++.||+.+.+.++ +..|+||||.|++.|+.++|++||++|++
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------- 62 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYEVDD------------- 62 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-------------
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 4789999999999999999987643221 24588999999999999999999999875
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+.+++++|++
T Consensus 63 -----------~~~~d~~g~t~L~~A~~~g~~~-~v~~Ll~------~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 63 -----------PSLPNDEGITALHNAVCAGHTE-IVKFLVQ------FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp -----------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHH------HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 5777889999999999998876 8999964 578999999999999999999999999999998
Q ss_pred hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccc--cccccchhhhhhccc
Q 003138 729 KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVL--SLQTEKITTKVMQQQ 782 (845)
Q Consensus 729 kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~--~~~~~~~~~~~~~~~ 782 (845)
+.++-. .. ...+..|+++++ ...|+...++.+..+
T Consensus 125 ~ga~~~--------~~-----------~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~ 161 (239)
T 1ycs_B 125 SGAAVF--------AM-----------TYSDMQTAADKCEEMEEGYTQCSQFLYGV 161 (239)
T ss_dssp TTCCTT--------CC-----------CSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred cCCCcc--------ee-----------cCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence 866532 00 112344778887 555555566555543
No 55
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=3.1e-19 Score=184.86 Aligned_cols=175 Identities=11% Similarity=0.004 Sum_probs=132.1
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++++.||+.+.+ .+..+..|+||||+|+..|+.++|++||++|++++... ..|++
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~ 130 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWA---------VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLF 130 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC---------CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 4899999999999999999986422 22446679999999999999999999999999887332 23554
Q ss_pred hhhhhccCCccc------ccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGFI------FKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~~------f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+... .+++. +..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+.+|+
T Consensus 131 ~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~g~~~-~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 131 NACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVE-CVNSLIA------YGGNIDHKISHLGTPLYLACENQQ 202 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSC-SCTTSCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHcCHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCCcCCCCCCHHHHHHHcCc
Confidence 443333222111 13443 345999999999998876 8999964 578899999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
.+++++|+++..+.. +...+.|++|+++..++...++.+..
T Consensus 203 ~~~v~~Ll~~ga~~~---------------------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 203 RACVKKLLESGADVN---------------------QGKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHHHHHHHHTTCCTT---------------------CCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCC---------------------CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999987744321 12345688999998777666655543
No 56
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=8.3e-19 Score=181.28 Aligned_cols=177 Identities=17% Similarity=0.082 Sum_probs=129.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|+.++++.||+.+.+ +...+..|.||||+|+..|+.++|++||++|++++... ..|++
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGAD---------VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 5899999999999999999986532 22446679999999999999999999999999887432 23554
Q ss_pred hhhhhccCCccc------ccCCC------------------------------------------------------CCC
Q 003138 646 KQLVDRAGSGFI------FKPNV------------------------------------------------------IGP 665 (845)
Q Consensus 646 k~lv~~~~~~~~------f~pNa------------------------------------------------------~g~ 665 (845)
.++..+..+.+. .+++. .+.
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCC
Confidence 443332211111 13333 235
Q ss_pred CCChHHHHHHhCCC--hHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEe
Q 003138 666 AGLTPLHVAACRDD--AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILD 743 (845)
Q Consensus 666 ~G~TPLHiAA~~~~--~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~ 743 (845)
.|.||||+|+..++ ..+++++|++ .|+++|.+|.+|+||||+|+.+|+.+++++|+++..+-.
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n--------- 274 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLR------KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN--------- 274 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHH------cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---------
Confidence 68899999998743 2458999965 578899999999999999999999999999988755422
Q ss_pred cCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 744 IPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 744 I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+...+.|++|++...++...++.+.
T Consensus 275 -----------~~d~~g~t~L~~A~~~~~~~~v~~Ll 300 (351)
T 3utm_A 275 -----------ALDSLGQTALHRAALAGHLQTCRLLL 300 (351)
T ss_dssp -----------CCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 12234568899988866555554444
No 57
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.79 E-value=6.1e-19 Score=174.41 Aligned_cols=171 Identities=16% Similarity=0.024 Sum_probs=107.5
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcC-CCCCCCC---CCchh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA-PDNVLDK---PGSRQ 645 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~g-ad~~~~~---~~~~~ 645 (845)
++||+|+..|..++++.|++.+.. ....+..|.||||+|+..++.++|++|++++ .+.+... ..|.+
T Consensus 46 t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 116 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVKYLIKAGAL---------VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMI 116 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCC---------CCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHH
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCC---------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHH
Confidence 455555555555555555543211 1122334555555555555555555555555 3333111 11222
Q ss_pred hhhhhccCCc------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSG------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+. ...+++.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|.||||+|+.+|+
T Consensus 117 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 189 (237)
T 3b7b_A 117 WATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVD-IAEILLA------AKCDLHAVNIHGDSPLHIAARENR 189 (237)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHH-HHHHHHT------TTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHhCC
Confidence 2221111110 01246788899999999999998876 8999964 578899999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
.+++++|+++..+-. + +...+.|++++++..++...+
T Consensus 190 ~~~v~~Ll~~gad~~---------~-----------~d~~g~t~l~~A~~~~~~~~~ 226 (237)
T 3b7b_A 190 YDCVVLFLSRDSDVT---------L-----------KNKEGETPLQCASLNSQVWSA 226 (237)
T ss_dssp HHHHHHHHTTTCCTT---------C-----------CCTTSCCHHHHSCTTCHHHHH
T ss_pred HhHHHHHHHcCCCCC---------c-----------cCCCCCCHHHHHHHHHHHHHH
Confidence 999999988755422 1 334567889999887655433
No 58
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=3.6e-20 Score=170.15 Aligned_cols=121 Identities=25% Similarity=0.213 Sum_probs=102.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+. ++ ...+..|.||||+|+..++.++|++||++|++
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~--~~-------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 68 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGS--DP-------NVKDHAGWTPLHEACNHGHLKVVELLLQHKAL------------- 68 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC--CS-------CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC--CC-------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-------------
Confidence 589999999999999999998642 22 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+..++.+++++|.+
T Consensus 69 -----------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 69 -----------VNTTGYQNDSPLHDAAKNGHVD-IVKLLLS------YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp -----------TTCCCGGGCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred -----------ccCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 4667788999999999998876 8999964 578899999999999999999888887776655
Q ss_pred h
Q 003138 729 K 729 (845)
Q Consensus 729 k 729 (845)
.
T Consensus 131 ~ 131 (137)
T 3c5r_A 131 N 131 (137)
T ss_dssp -
T ss_pred c
Confidence 4
No 59
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.79 E-value=6.3e-19 Score=174.14 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=108.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCC----CCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCch
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTG----DHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSR 644 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~----~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~ 644 (845)
.++||+|+.+|+.++++.||+.+.+.+.... .......+..|.||||+|++.|+.++|++||++|++
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--------- 146 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD--------- 146 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC---------
Confidence 5899999999999999999997644322100 001112234699999999999999999999999986
Q ss_pred hhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHH----HHhhcCCCCCCccccc------CCcCCCCCCHHHHH
Q 003138 645 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL----DALTDDPGSVGIEAWK------SAQDSTGLTPNDYA 714 (845)
Q Consensus 645 ~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vv----elLl~~p~~ig~gA~v------NakD~~G~TPLHyA 714 (845)
+|.+|..|.||||+|+..++.+ ++ ++|++. |++. |.+|..|+||||+|
T Consensus 147 ---------------~~~~d~~g~t~L~~A~~~~~~~-~~~~i~~~Ll~~------g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 147 ---------------IRAQDSLGNTVLHILILQPNKT-FACQMYNLLLSY------DGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp ---------------TTCCCTTSCCHHHHHHTCSCHH-HHHHHHHHHHHT------TCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred ---------------CCCCCCCCCCHHHHHHHcCChH-HHHHHHHHHHhc------CCchhhhhhhccCCCCCCCHHHHH
Confidence 5777889999999999998875 55 888654 4555 69999999999999
Q ss_pred HHcCCHHHHHHHHHhhhhcC
Q 003138 715 SLRAHHSYIHLVQRKINKKS 734 (845)
Q Consensus 715 a~~Gn~e~ieLL~~kl~~~~ 734 (845)
+.+|+.+++++|+++.....
T Consensus 205 ~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 205 GVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHTCHHHHHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHhcCccch
Confidence 99999999999999987643
No 60
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=4.9e-19 Score=170.79 Aligned_cols=146 Identities=14% Similarity=0.091 Sum_probs=114.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHH-hcCCCCCCCC---CCch
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLL-NYAPDNVLDK---PGSR 644 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL-~~gad~~~~~---~~~~ 644 (845)
.++||+|+..|+.++++.||+.+.+ +...+..|.||||+|+..++.++|++|+ ..+++.+... ..|.
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRGAD---------INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 4799999999999999999986532 2234567999999999999999999999 5555655322 2355
Q ss_pred hhhhhhccCCcc-------cccCCCCCCCCChHHHHHHhCCCh----HHHHHHhhcCCCCCCcccccCCcCCCCCCHHHH
Q 003138 645 QKQLVDRAGSGF-------IFKPNVIGPAGLTPLHVAACRDDA----ENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 713 (845)
Q Consensus 645 ~k~lv~~~~~~~-------~f~pNa~g~~G~TPLHiAA~~~~~----e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHy 713 (845)
+.++..+..+.. ..++|.++..|.||||+|+..++. .+++++|++ .|+++|.+|.+|+||||+
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME------NGADQSIKDNSGRTAMDY 184 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH------TTCCTTCCCTTSCCHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH------CCCCCCccCCCCCCHHHH
Confidence 444332211111 136789999999999999998761 458999965 578999999999999999
Q ss_pred HHHcCCHHHHHHHHHh
Q 003138 714 ASLRAHHSYIHLVQRK 729 (845)
Q Consensus 714 Aa~~Gn~e~ieLL~~k 729 (845)
|+.+|+.+++++|+++
T Consensus 185 A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 185 ANQKGYTEISKILAQY 200 (201)
T ss_dssp HHHHTCHHHHHHHHTC
T ss_pred HHHcCCHhHHHHHHhc
Confidence 9999999999999864
No 61
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=3.4e-19 Score=154.22 Aligned_cols=91 Identities=32% Similarity=0.345 Sum_probs=82.3
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhc
Q 003138 610 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTD 689 (845)
Q Consensus 610 G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~ 689 (845)
|+||||+|++.++.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~n~~d~~g~t~L~~A~~~~~~~-~v~~Ll~ 56 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLLE 56 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC------------------------CcccCCCCCCHHHHHHHcCCHH-HHHHHHH
Confidence 78999999999999999999999976 5677889999999999998876 8999964
Q ss_pred CCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 003138 690 DPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKIN 731 (845)
Q Consensus 690 ~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~ 731 (845)
.|+++|.+|.+|+||||+|+.+|+.+++++|+++.+
T Consensus 57 ------~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 57 ------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp ------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred ------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 578899999999999999999999999999988754
No 62
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.78 E-value=2.1e-19 Score=172.27 Aligned_cols=125 Identities=22% Similarity=0.175 Sum_probs=109.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+.+ +...+..|.||||+|+..++.++|++||++|++
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 97 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGAR---------INVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD------------- 97 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCC---------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 4799999999999999999986532 223456799999999999999999999999976
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
+|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+..++.+++++|.+
T Consensus 98 -----------~~~~d~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 98 -----------INAVNEHGNVPLHYACFWGQDQ-VAEDLVA------NGALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 4677889999999999998876 8999965 578899999999999999999999999999998
Q ss_pred hhhhc
Q 003138 729 KINKK 733 (845)
Q Consensus 729 kl~~~ 733 (845)
+..+-
T Consensus 160 ~g~~~ 164 (179)
T 3f6q_A 160 MGQNL 164 (179)
T ss_dssp TTCCC
T ss_pred hhcCc
Confidence 87764
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.78 E-value=6.9e-19 Score=190.53 Aligned_cols=172 Identities=17% Similarity=0.129 Sum_probs=132.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++++.|++.+.+ + ...+..|.||||+|++.++.++|++|+++|++.+... ..+++
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~ 283 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGS--A-------NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLH 283 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC--T-------TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--C-------CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 4799999999999999999986532 2 2335568999999999999999999999998877432 22444
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+.. ..++|.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+
T Consensus 284 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~gad~n~~~~~g~t~L~~A~~~g~ 356 (437)
T 1n11_A 284 LVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK-LVKFLLQ------HQADVNAKTKLGYSPLHQAAQQGH 356 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHH-HHHHHHh------cCCCCCCCCCCCCCHHHHHHHCCh
Confidence 44333221111 2367889999999999999998876 8999965 578999999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
.+++++|+++.++.. + +..++.|++++++..|.+..+
T Consensus 357 ~~iv~~Ll~~ga~~~---------~-----------~~~~g~t~l~~A~~~g~~~~~ 393 (437)
T 1n11_A 357 TDIVTLLLKNGASPN---------E-----------VSSDGTTPLAIAKRLGYISVT 393 (437)
T ss_dssp HHHHHHHHHTTCCSC---------C-----------CCSSSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCcCCCC---------C-----------CCCCCCCHHHHHHHcCcHHHH
Confidence 999999998766532 1 334567889999886554444
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.78 E-value=1e-18 Score=183.10 Aligned_cols=158 Identities=16% Similarity=0.062 Sum_probs=118.1
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCC-CCCCchhhhhccccHHHHHHHcCCHHHHHHHHh-cCCCCCCCC-CC--c
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDT-GDHTSSELAILEMGLLHKAVRRNCRPMVELLLN-YAPDNVLDK-PG--S 643 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~-~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~-~gad~~~~~-~~--~ 643 (845)
.++||+|+..|+.++++.|++.+.+.++.. ........+..|.||||+|+++|+.++|++||+ .|++++... .+ +
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~ 205 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 205 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH
Confidence 479999999999999999999875433321 111223345669999999999999999999996 588887432 22 3
Q ss_pred hhhhhhhccCCc----------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHH
Q 003138 644 RQKQLVDRAGSG----------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDY 713 (845)
Q Consensus 644 ~~k~lv~~~~~~----------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHy 713 (845)
...++....... ...++|.++..|+||||+|+..++.+ +++.|+.. .++++|++|.+|+||||+
T Consensus 206 l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~-~v~~Ll~~-----~~~~vn~~d~~G~TpL~~ 279 (337)
T 4g8k_A 206 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLG-LVQRLLEQ-----EHIEINDTDSDGKTALLL 279 (337)
T ss_dssp HHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHH-HHHHHHTS-----TTCCTTCBCTTSCBHHHH
T ss_pred HHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhH-HHHHHHHh-----cCCcccCcCCCCCCHHHH
Confidence 322222111110 12378999999999999999998876 78888653 378899999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhh
Q 003138 714 ASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 714 Aa~~Gn~e~ieLL~~kl~~ 732 (845)
|+.+|+.+++++|+++.++
T Consensus 280 A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 280 AVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp HHHTTCHHHHHHHHTTSCS
T ss_pred HHHcCCHHHHHHHHHCCCC
Confidence 9999999999999987664
No 65
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=4.9e-19 Score=178.58 Aligned_cols=125 Identities=21% Similarity=0.144 Sum_probs=109.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|..++++.||+.+. ++ +..+..|+||||+|+..|+.++|++||++|++
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~g~--~~-------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------- 95 (239)
T 1ycs_B 38 LALLLDSSLEGEFDLVQRIIYEVD--DP-------SLPNDEGITALHNAVCAGHTEIVKFLVQFGVN------------- 95 (239)
T ss_dssp HHHHHHHHHHTCHHHHHHHTSTTS--SC-------CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-------------
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCC--CC-------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 589999999999999999997653 22 23466799999999999999999999999986
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCC-CHHHHH--HHcCCHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYA--SLRAHHSYIHL 725 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~-TPLHyA--a~~Gn~e~ieL 725 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .||++|.+|..|. ||||+| +.+|+.+++++
T Consensus 96 -----------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 96 -----------VNAADSDGWTPLHCAASCNNVQ-VCKFLVE------SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp -----------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 5677889999999999998876 8999965 5789999998887 999999 78899999999
Q ss_pred HHHhhhhc
Q 003138 726 VQRKINKK 733 (845)
Q Consensus 726 L~~kl~~~ 733 (845)
|+.+.++.
T Consensus 158 Ll~~~a~~ 165 (239)
T 1ycs_B 158 LYGVQEKM 165 (239)
T ss_dssp HHHHHHHT
T ss_pred HHHhhhcc
Confidence 99987764
No 66
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=4.4e-19 Score=171.64 Aligned_cols=110 Identities=24% Similarity=0.159 Sum_probs=94.4
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.++||+|+.+|+.++++.||+ . .+++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~--~~~~-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------ 101 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-D--RDVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------ 101 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-T--SCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-c--CCCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 3689999999999999999997 3 3332 3466799999999999999999999999986
Q ss_pred hhhccCCcccccCCCCC-CCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcC
Q 003138 648 LVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRA 718 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g-~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~G 718 (845)
+|.++ ..|.||||+|+..++.+ ++++|++ .|+++|.+|.+|+||||+|+..+
T Consensus 102 ------------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 102 ------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVE------LGADIEVEDERGLTALELAREIL 154 (183)
T ss_dssp ------------TTCCCSSSSCCHHHHHHHTTCHH-HHHHHHH------HTCCTTCCCTTSCCHHHHHHHHH
T ss_pred ------------CCcCCCCCCCCHHHHHHhcCcHH-HHHHHHH------cCCCCcCCCCCCCCHHHHHHHhc
Confidence 45555 78999999999998876 8999964 57899999999999999998763
No 67
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.78 E-value=3.4e-19 Score=177.25 Aligned_cols=131 Identities=19% Similarity=0.136 Sum_probs=110.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.|++.+...... ......+..|.||||+|+..|+.++|++||++|++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------- 142 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLH---SILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD------------- 142 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSS---CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHH---HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 58999999999999999999875432111 11223355699999999999999999999999986
Q ss_pred hhccCCcccccCCCCCC-CCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~-~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.++. .|.||||+|+..++.+ ++++|++ .||++|.+|..|+||||+|+.+|+.+++++|+
T Consensus 143 -----------~~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll 204 (236)
T 1ikn_D 143 -----------VNAQEPCNGRTALHLAVDLQNPD-LVSLLLK------CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLG 204 (236)
T ss_dssp -----------TTCCCTTTCCCHHHHHHHTTCHH-HHHHHHT------TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCcccCCCCCHHHHHHccCchHHHHHHH
Confidence 456666 8999999999998876 8999964 58899999999999999999999999999999
Q ss_pred Hhhhhc
Q 003138 728 RKINKK 733 (845)
Q Consensus 728 ~kl~~~ 733 (845)
++.++.
T Consensus 205 ~~ga~~ 210 (236)
T 1ikn_D 205 QLTLEN 210 (236)
T ss_dssp TTSCGG
T ss_pred Hcchhh
Confidence 987764
No 68
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.78 E-value=8.3e-19 Score=172.79 Aligned_cols=177 Identities=15% Similarity=0.054 Sum_probs=131.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++|++|+..|..++++.||+.... .....+..|.||||+|+..|+.++|++|+++|++++... ..+++
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 78 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKS--------LATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLH 78 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGG--------GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchh--------hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHH
Confidence 3689999999999999999975321 112235669999999999999999999999998877432 23554
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+.+ ..+++.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 151 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHE-IAVMLLE------GGANPDAKDHYDATAMHRAAAKGN 151 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCcHHHHHHHcCC
Confidence 44333222111 1367888899999999999988776 8898864 467889999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+++++|.++..+-. .+...+.|++|++...++...++.+.
T Consensus 152 ~~~v~~Ll~~g~~~~--------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 152 LKMVHILLFYKASTN--------------------IQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HHHHHHHHHTTCCSC--------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhcCCCcc--------------------ccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999998887644321 12234568899998866555554443
No 69
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.78 E-value=1.2e-18 Score=182.04 Aligned_cols=138 Identities=20% Similarity=0.124 Sum_probs=113.9
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~---n~~eIVElLL~~gad~~~~~~~~~~ 645 (845)
-..|+.|+..|..+.++.++..+.+.+.. ......+..|+||||+|++. ++.++|++||++|++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~---~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---------- 197 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEK---IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---------- 197 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSB---CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC----------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhh---ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC----------
Confidence 35788999999999999999876432211 00112245699999999999 999999999999986
Q ss_pred hhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHH
Q 003138 646 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 725 (845)
Q Consensus 646 k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieL 725 (845)
+|.+|..|.||||+||..++.+ ++++|++ .||++|.+|.+|.||||+|+.+|+.+++++
T Consensus 198 --------------in~~d~~g~TpLh~A~~~g~~~-~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 198 --------------LDKQTGKGSTALHYCCLTDNAE-CLKLLLR------GKASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp --------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 5777889999999999998876 8999964 689999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCceEE
Q 003138 726 VQRKINKKSSESGRVIL 742 (845)
Q Consensus 726 L~~kl~~~~~~~~~v~l 742 (845)
|+++.+++. +.|+.+
T Consensus 257 Ll~~ga~~~--~~~~~v 271 (278)
T 1dcq_A 257 LTQALSGRF--NSHVHV 271 (278)
T ss_dssp HHHHHTTCC--CSSCCC
T ss_pred HHHcCCCCC--Ccceee
Confidence 999988765 555433
No 70
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=1e-18 Score=184.98 Aligned_cols=129 Identities=13% Similarity=0.122 Sum_probs=112.1
Q ss_pred chHHHHHHhCC--CHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhh
Q 003138 569 KWLLEFSMEHD--WCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQK 646 (845)
Q Consensus 569 ~~LL~fAve~g--~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k 646 (845)
.++||+|+..| +.++++.||+.+. ++ +..+..|+||||+|++.|+.++|++||++|++..
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga--~~-------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--------- 200 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGA--SP-------TAKDKADETPLMRAMEFRNREALDLMMDTVPSKS--------- 200 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTC--CT-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS---------
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCC--CC-------cccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc---------
Confidence 58999999999 9999999998753 22 2346679999999999999999999999998632
Q ss_pred hhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 647 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 647 ~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
..++|.++..|.||||+|+..++.+ ++++|++ .||++|.+|.+|+||||+|+.+|+.+++++|
T Consensus 201 ----------~~~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~g~~~~v~~L 263 (364)
T 3ljn_A 201 ----------SLRLDYANKQGNSHLHWAILINWED-VAMRFVE------MGIDVNMEDNEHTVPLYLSVRAAMVLLTKEL 263 (364)
T ss_dssp ----------SCCTTCCCTTCCCTTHHHHTTTCHH-HHHHHHT------TTCCTTCCCTTSCCHHHHHHHTCCHHHHHHH
T ss_pred ----------cccccccCCCCCcHHHHHHHcCCHH-HHHHHHH------cCCCCCCCCCCCCCHHHHHHHhChHHHHHHH
Confidence 1246888999999999999998876 8999964 5899999999999999999999999999999
Q ss_pred HHhhhh
Q 003138 727 QRKINK 732 (845)
Q Consensus 727 ~~kl~~ 732 (845)
+++.++
T Consensus 264 l~~~~~ 269 (364)
T 3ljn_A 264 LQKTDV 269 (364)
T ss_dssp HHHSCH
T ss_pred HHcCCc
Confidence 998654
No 71
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=5.5e-19 Score=183.28 Aligned_cols=161 Identities=19% Similarity=0.168 Sum_probs=117.5
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCc---------------------------------CCCCCCchhhhhccccHHHH
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTV---------------------------------DTGDHTSSELAILEMGLLHK 616 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v---------------------------------~~~~~s~~~~~~~G~TpLH~ 616 (845)
+.|+.|+.+|+.++|+.||+.+..... -..+++++..+..|+||||+
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~ 92 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHV 92 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHHHH
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 577788888888888888764321000 00123333445567777777
Q ss_pred HHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCc
Q 003138 617 AVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGI 696 (845)
Q Consensus 617 AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~ 696 (845)
|++.|+.++|++||++|++ ++.++..|.||||+|+..++.+ ++++|++ .
T Consensus 93 A~~~g~~~~v~~Ll~~~a~------------------------~~~~~~~g~t~l~~a~~~~~~~-~~~~Ll~------~ 141 (269)
T 4b93_B 93 AALHGRADLIPLLLKHGAN------------------------AGARNADQAVPLHLACQQGHFQ-VVKCLLD------S 141 (269)
T ss_dssp HHHTTCTTHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------T
T ss_pred HHHcCcHHHHHHHHhcCCC------------------------cCccCCCCCCccccccccChHH-HHHHHHH------C
Confidence 7777777777777777765 5667789999999999998776 8999965 5
Q ss_pred ccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhh
Q 003138 697 EAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITT 776 (845)
Q Consensus 697 gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~ 776 (845)
|+++|.+|.+|+||||+|+.+|+.+++++|+++.++-. .+...+.|+||+++..|+...+
T Consensus 142 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn--------------------~~~~~g~t~Lh~A~~~g~~~~v 201 (269)
T 4b93_B 142 NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASIN--------------------ASNNKGNTALHEAVIEKHVFVV 201 (269)
T ss_dssp TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT--------------------CBCTTSCBHHHHHHHTTCHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC--------------------ccccCCCcHHHHHHHcCCHHHH
Confidence 78899999999999999999999999999987754321 1223557889999998877777
Q ss_pred hhhcc
Q 003138 777 KVMQQ 781 (845)
Q Consensus 777 ~~~~~ 781 (845)
+.+..
T Consensus 202 ~~Ll~ 206 (269)
T 4b93_B 202 ELLLL 206 (269)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 72
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=2.9e-19 Score=185.44 Aligned_cols=120 Identities=17% Similarity=0.058 Sum_probs=81.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+..|+.++++.||+.+.+ ++ . ..|.||||+|++.|+.++|++||++|++++
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~--~~-------~--~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~----------- 89 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGAL--KN-------L--LENEFPLHQAATLEDTKIVKILLFSGLDDS----------- 89 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGG--GS-------C--CTTCCHHHHHTTSSSCHHHHHHHHTTCCTT-----------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC--CC-------C--CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-----------
Confidence 4799999999999999999987533 22 1 138999999999999999999999998754
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCC-CCHHHHHHHcCCHHHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTG-LTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G-~TPLHyAa~~Gn~e~ieLL~ 727 (845)
.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..| .||||+|+..|+.+++++|+
T Consensus 90 -------------~~d~~g~t~L~~A~~~g~~~-~v~~Ll~------~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll 149 (285)
T 3kea_A 90 -------------QFDDKGNTALYYAVDSGNMQ-TVKLFVK------KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL 149 (285)
T ss_dssp -------------CCCTTSCCHHHHHHHTTCHH-HHHHHHH------HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHH
T ss_pred -------------CcCCCCCcHHHHHHHcCCHH-HHHHHHh------cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 44445555555555555443 5555532 345555555555 45555555555555555555
Q ss_pred Hhh
Q 003138 728 RKI 730 (845)
Q Consensus 728 ~kl 730 (845)
++.
T Consensus 150 ~~g 152 (285)
T 3kea_A 150 SEI 152 (285)
T ss_dssp TTS
T ss_pred hCC
Confidence 443
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1.3e-18 Score=174.25 Aligned_cols=177 Identities=14% Similarity=0.034 Sum_probs=129.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCC---------
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLD--------- 639 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~--------- 639 (845)
.++||+|+..|+.++++.|++.+.+ +...+..|.||||+|++.++.++|++|+++|++.+..
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~ 143 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGAD---------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC---------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHh
Confidence 4799999999999999999986422 2234567899999999999999999999999887643
Q ss_pred --C--CCchhhhhhhcc-------CCcccccCCCCCCCCChHHHHHHhCCCh---HHHHHHhhcCCCCCCcccccCCcCC
Q 003138 640 --K--PGSRQKQLVDRA-------GSGFIFKPNVIGPAGLTPLHVAACRDDA---ENVLDALTDDPGSVGIEAWKSAQDS 705 (845)
Q Consensus 640 --~--~~~~~k~lv~~~-------~~~~~f~pNa~g~~G~TPLHiAA~~~~~---e~VvelLl~~p~~ig~gA~vNakD~ 705 (845)
. ..+++.++..+. .+.+..++|.++..|.||||+|+..++. .+++++|++ .|+++|.+|.
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~------~g~~~~~~~~ 217 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD------HGADVNVRGE 217 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH------TTCCSSCCCT
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH------cCCCCCCcCC
Confidence 1 124433322221 1122346788899999999999998772 348888864 5788999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-hhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 706 TGLTPNDYASLRAHHSYIHLVQRK-INKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 706 ~G~TPLHyAa~~Gn~e~ieLL~~k-l~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.|.||||+|+.+|+.+++++|.++ ..+-. .+...+.|+++++...++...++.+.
T Consensus 218 ~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~--------------------~~~~~g~t~l~~A~~~~~~~i~~~Ll 273 (285)
T 1wdy_A 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEIN--------------------DTDSDGKTALLLAVELKLKKIAELLC 273 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHSSSCCTT--------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCCcc--------------------ccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 999999999999999999988773 22211 13345678899998876655554443
No 74
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.77 E-value=1.6e-18 Score=169.81 Aligned_cols=125 Identities=22% Similarity=0.183 Sum_probs=90.3
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+..|..++++.|++.+.+ +...+..|.||||+|+..++.++|++||++|+
T Consensus 94 t~L~~A~~~~~~~~~~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--------------- 149 (223)
T 2f8y_A 94 TPLILAARLAVEGMLEDLINSHAD---------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA--------------- 149 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC---------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC---------------
T ss_pred cHHHHHHHhCcHHHHHHHHHcCCC---------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC---------------
Confidence 455555555555555555543211 11223345555555555555555555555554
Q ss_pred hccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 003138 650 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 729 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~k 729 (845)
++|.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+|+.+++++|.++
T Consensus 150 ---------~~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 150 ---------NKDMQNNREETPLFLAAREGSYE-TAKVLLD------HFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213 (223)
T ss_dssp ---------CTTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ---------CCCCcCCCCcCHHHHHHHcCCHH-HHHHHHH------cCCCCccccccCCCHHHHHHHhcchHHHHHHHHc
Confidence 36778889999999999998876 8999965 5788999999999999999999999999999998
Q ss_pred hhhcC
Q 003138 730 INKKS 734 (845)
Q Consensus 730 l~~~~ 734 (845)
..++.
T Consensus 214 g~~~~ 218 (223)
T 2f8y_A 214 NLVRS 218 (223)
T ss_dssp TCSSC
T ss_pred CCCcc
Confidence 77643
No 75
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.77 E-value=1.6e-18 Score=177.31 Aligned_cols=178 Identities=13% Similarity=0.026 Sum_probs=104.3
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++|++|+..|..++++.||+.+.+ + +..+..|.||||+|+..|+.++|++||++|++++... ..|++
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 111 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGAD--I-------NYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLH 111 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCC--T-------TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCC--C-------cccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 4799999999999999999986532 2 2345679999999999999999999999998754211 11222
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccc--------------------
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAW-------------------- 699 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~-------------------- 699 (845)
.++..+..+.+ ..+++.++..|.||||+|+..++.+ +++.|+.. .+++
T Consensus 112 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~ll~~-----~~~~~~~~~~~~~~~~~~~~~~~l 185 (299)
T 1s70_B 112 AAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEE-LLQNEVNR-----QGVDIEAARKEEERIMLRDARQWL 185 (299)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHH-HHHHHHHH-----HTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHH-HHHHHHhh-----cCCCchhhhhhhhhHHHHHHHHHH
Confidence 22221111110 1133444444444444444433222 33332211 0111
Q ss_pred ------cCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccc
Q 003138 700 ------KSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEK 773 (845)
Q Consensus 700 ------vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~ 773 (845)
...+|..|.||||+|+.+|+.+++++|+++..+- +.+...+.|++|+++..|+.
T Consensus 186 ~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~--------------------~~~d~~g~tpL~~A~~~~~~ 245 (299)
T 1s70_B 186 NSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV--------------------NIKDYDGWTPLHAAAHWGKE 245 (299)
T ss_dssp HHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCT--------------------TCCCTTCCCHHHHHHHTTCH
T ss_pred hccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCC--------------------CCcCCCCCcHHHHHHhcCCH
Confidence 1123455666666677777776666666543321 11334567889999987766
Q ss_pred hhhhhhcc
Q 003138 774 ITTKVMQQ 781 (845)
Q Consensus 774 ~~~~~~~~ 781 (845)
..++.+..
T Consensus 246 ~~v~~Ll~ 253 (299)
T 1s70_B 246 EACRILVE 253 (299)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655543
No 76
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.77 E-value=9.4e-19 Score=176.92 Aligned_cols=120 Identities=22% Similarity=0.191 Sum_probs=92.5
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+..|..++++.||+.+. ++...+..|.||||+|++.++.++|++||++|++
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~---------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-------------- 182 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHA---------DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-------------- 182 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTC---------CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC--------------
T ss_pred cHHHHHHHcChHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--------------
Confidence 56777777777777777776432 1223344566777777777777777777777654
Q ss_pred hccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 003138 650 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRK 729 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~k 729 (845)
+|.++..|.||||+|+..++.+ ++++|++ .||+++.+|..|+||||+|+.+||.+++++|...
T Consensus 183 ----------~~~~~~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 183 ----------KDMQNNREETPLFLAAREGSYE-TAKVLLD------HFANRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp ----------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred ----------CCCcCCCCCCHHHHHHHCCCHH-HHHHHHH------cCCCccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 5778889999999999998876 8999965 5789999999999999999999999999988765
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=2e-18 Score=172.76 Aligned_cols=124 Identities=23% Similarity=0.194 Sum_probs=107.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhh-hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSEL-AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~-~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
.++|++|+..|..++++.||+.+.+ ++ .. +..|.||||+|++.|+.++|++||++|++
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g~~--~~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------ 64 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGGAN--VN-------FQEEEGGWTPLHNAVQMSREDIVELLLRHGAD------------ 64 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC--TT-------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCC--cc-------cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4799999999999999999986532 22 22 45689999999999999999999999876
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
++.++..|.||||+|+..++.+ ++++|++ .|+++|.+|..|+||||+|+.+|+.+++++|.
T Consensus 65 ------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 125 (285)
T 1wdy_A 65 ------------PVLRKKNGATPFLLAAIAGSVK-LLKLFLS------KGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125 (285)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH
T ss_pred ------------CcccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCccCcccCCHHHHHHHhCCHHHHHHHH
Confidence 4667789999999999998876 8999965 47889999999999999999999999999999
Q ss_pred Hhhhh
Q 003138 728 RKINK 732 (845)
Q Consensus 728 ~kl~~ 732 (845)
++..+
T Consensus 126 ~~g~~ 130 (285)
T 1wdy_A 126 KRGAN 130 (285)
T ss_dssp HTTCC
T ss_pred HhCCC
Confidence 88664
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.76 E-value=8.8e-19 Score=188.46 Aligned_cols=179 Identities=15% Similarity=0.044 Sum_probs=131.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcC---CCCCCCC---CC
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYA---PDNVLDK---PG 642 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~g---ad~~~~~---~~ 642 (845)
.++||+|+.+|+.++|++||+.+.+ + ...+..|.||||+|+..|+.++|++||+++ ++++... ..
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~--~-------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t 237 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGAD--P-------TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMT 237 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--S-------CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCC
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCC--C-------cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCC
Confidence 5899999999999999999986532 2 233567889999999999999999999876 5555222 22
Q ss_pred chhhhhhhc---cCCcc------cccCC--------CCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCC
Q 003138 643 SRQKQLVDR---AGSGF------IFKPN--------VIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS 705 (845)
Q Consensus 643 ~~~k~lv~~---~~~~~------~f~pN--------a~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~ 705 (845)
+++.++..+ ..+.. ..++| .++..|.||||+||..++.+ ++++|++. .++++|.+|.
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~-~v~~Ll~~-----~~~~~n~~d~ 311 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMP-IVKYLVGE-----KGSNKDKQDE 311 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHH-HHHHHHHH-----SCCCTTCCCT
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHH-HHHHHHHh-----cCCCccCcCC
Confidence 444433322 00000 11333 46779999999999998876 89999753 1488999999
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhccc
Q 003138 706 TGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQQ 782 (845)
Q Consensus 706 ~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~~ 782 (845)
+|+||||+|+.+|+.+++++|+++.++-. + +...+.|+++++...++..+++.+...
T Consensus 312 ~g~TpL~~A~~~g~~~iv~~Ll~~gad~~---------~-----------~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 312 DGKTPIMLAAQEGRIEVVMYLIQQGASVE---------A-----------VDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSS---------C-----------CCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------C-----------CCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999999999998765432 1 223457889999998887777766553
No 79
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.76 E-value=3.6e-19 Score=176.24 Aligned_cols=125 Identities=18% Similarity=0.091 Sum_probs=101.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCchhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNY-APDNVLDKPGSRQKQ 647 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~-gad~~~~~~~~~~k~ 647 (845)
.++||+|+.+|+.++++.||+.+.+ ++..+..|+||||+|+..|+.++|++||++ |++
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~------------ 132 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVG---------VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE------------ 132 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC------------
T ss_pred ccccccccccCcHHHHHHHHhCCCC---------ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC------------
Confidence 4799999999999999999986422 223456799999999999999999999998 765
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .||++|.+|.+|+||||+|+..|+.++++.|.
T Consensus 133 ------------~~~~d~~g~tpL~~A~~~~~~~-~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 133 ------------LNQQNKLGDTALHAAAWKGYAD-IVQLLLA------KGARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp ------------CCCCCTTSCCHHHHHHHHTCHH-HHHHHHH------HTCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred ------------ccccCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 5777889999999999998876 8999964 58899999999999999999999998888777
Q ss_pred Hhhhhc
Q 003138 728 RKINKK 733 (845)
Q Consensus 728 ~kl~~~ 733 (845)
.+.+..
T Consensus 194 ~~~~~~ 199 (222)
T 3ehr_A 194 GTDAVR 199 (222)
T ss_dssp ------
T ss_pred ccchhh
Confidence 765543
No 80
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.76 E-value=2.8e-19 Score=184.96 Aligned_cols=176 Identities=17% Similarity=0.071 Sum_probs=128.5
Q ss_pred HHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCC-CCCCCC-C--Cchhh
Q 003138 571 LLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAP-DNVLDK-P--GSRQK 646 (845)
Q Consensus 571 LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~ga-d~~~~~-~--~~~~k 646 (845)
.+|.|+..+..+.++.++..+.+..++ ..|..|+||||+|++.|+.++|++||++|+ +++... . .|.+.
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~~~~~n-------~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLLDYVVN-------IADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHHHHHHT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCc-------CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH
Confidence 456677778888888887766543333 235679999999999999999999999998 665322 2 24444
Q ss_pred hhhh-----ccCCc------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHH
Q 003138 647 QLVD-----RAGSG------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS 715 (845)
Q Consensus 647 ~lv~-----~~~~~------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa 715 (845)
++.. +..+. ....++..+..|.||||+|+..++.+ ++++|++ .||++|.+|.+|+||||+|+
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~-~v~~Ll~------~gad~n~~d~~G~TpLh~A~ 224 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVD-VVKALLA------CEADVNVQDDDGSTALMCAC 224 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH-HHHHHHh------CCCCCCCCCCCCCCHHHHHH
Confidence 3311 00000 01245677889999999999998876 8999964 58899999999999999999
Q ss_pred HcCCHHHHHHHHH-hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 716 LRAHHSYIHLVQR-KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 716 ~~Gn~e~ieLL~~-kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+|+.+++++|++ +.++-. + +...+.|+++++...|+...++.+.
T Consensus 225 ~~g~~~iv~~Ll~~~gad~~---------~-----------~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 225 EHGHKEIAGLLLAVPSCDIS---------L-----------TDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp HHTCHHHHHHHHTSTTCCTT---------C-----------CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHhcCCCCCc---------C-----------cCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999987 443321 1 3345678899999987776665554
No 81
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=1.4e-18 Score=176.60 Aligned_cols=124 Identities=21% Similarity=0.162 Sum_probs=105.9
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
-.++||+|+..|..++++.||+ . .++ +..+..|+||||+|+..|+.++|++||++|++
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~--~~~-------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------------ 102 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-D--RDV-------DAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------------ 102 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-T--CCT-------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-C--CCC-------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------------
Confidence 3589999999999999999997 3 233 24466799999999999999999999999987
Q ss_pred hhhccCCcccccCCCCC-CCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHH-----------
Q 003138 648 LVDRAGSGFIFKPNVIG-PAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYAS----------- 715 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g-~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa----------- 715 (845)
+|.++ ..|.||||+|+..++.+ ++++|++ .||++|.+|..|+||||+|+
T Consensus 103 ------------~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~ 163 (244)
T 3ui2_A 103 ------------LDHRDMRGGLTALHMAAGYVRPE-VVEALVE------LGADIEVEDERGLTALELAREILKTTPKGNP 163 (244)
T ss_dssp ------------TTCCCSSSCCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTCCCHHHHHHHHHTTCCCSSH
T ss_pred ------------CCcCCCCCCCCHHHHHHHcCCHH-HHHHHHH------CCCCCCCCCCCCCcHHHHHHHHHhccCCCCH
Confidence 45555 67999999999998876 8999965 57899999999999999998
Q ss_pred -----HcCCHHHHHHHHHhhhh
Q 003138 716 -----LRAHHSYIHLVQRKINK 732 (845)
Q Consensus 716 -----~~Gn~e~ieLL~~kl~~ 732 (845)
..|+.+++++|..+..+
T Consensus 164 l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 164 MQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHcChHHHHHHHHHhccc
Confidence 67899999999887544
No 82
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.75 E-value=2.3e-18 Score=158.12 Aligned_cols=120 Identities=24% Similarity=0.225 Sum_probs=99.6
Q ss_pred hhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHH
Q 003138 606 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 685 (845)
Q Consensus 606 ~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vve 685 (845)
.+..|+||||+|+..|+.++|++||++|++ +|.++..|.||||+|+..++.+ +++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------PNVKDHAGWTPLHEACNHGHLK-VVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCC------------------------SCCCCTTSCCHHHHHHHTTCHH-HHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCcCCCCCCCHHHHHHHcCCHH-HHH
Confidence 456799999999999999999999999876 4667889999999999998876 899
Q ss_pred HhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccc
Q 003138 686 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSR 765 (845)
Q Consensus 686 lLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~ 765 (845)
+|++ .|+++|.+|..|+||||+|+..|+.+++++|+++..+.. + +...+.|+++
T Consensus 61 ~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------~-----------~~~~g~tpl~ 114 (137)
T 3c5r_A 61 LLLQ------HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN---------A-----------VNIFGLRPVD 114 (137)
T ss_dssp HHHH------TTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCGGG
T ss_pred HHHH------cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C-----------CCCCCCCHHH
Confidence 9965 578899999999999999999999999999987755422 1 3345678899
Q ss_pred cccccccchhh
Q 003138 766 VLSLQTEKITT 776 (845)
Q Consensus 766 i~~~~~~~~~~ 776 (845)
++...+.+..+
T Consensus 115 ~A~~~~~~~~l 125 (137)
T 3c5r_A 115 YTDDESMKSLL 125 (137)
T ss_dssp GCCCHHHHHHH
T ss_pred HHhhccHHHHH
Confidence 98875444443
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=5.8e-19 Score=174.38 Aligned_cols=151 Identities=13% Similarity=-0.008 Sum_probs=117.3
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhh-hccccHHHHHHHcCCH----HHHHHHHhcCCCCCCCCCCch
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCR----PMVELLLNYAPDNVLDKPGSR 644 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~-~~G~TpLH~AV~~n~~----eIVElLL~~gad~~~~~~~~~ 644 (845)
..|+.|+..|..+.++.++... ++ ..+ ..|+||||+|+.+++. +||++||++|+|
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~----~~-------~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--------- 67 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG----YE-------DKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--------- 67 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS----SS-------CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---------
T ss_pred cHHHHHHHcCCHHHHHHHHhcC----cc-------cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---------
Confidence 3578999999999999988642 11 233 5699999999999985 599999999986
Q ss_pred hhhhhhccCCcccccCCCCCCCCChHHHHHHhCCCh-----HHHHHHhhcCCCCCCcccccCCcCCCCC-CHHHHHHHcC
Q 003138 645 QKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDA-----ENVLDALTDDPGSVGIEAWKSAQDSTGL-TPNDYASLRA 718 (845)
Q Consensus 645 ~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~-----e~VvelLl~~p~~ig~gA~vNakD~~G~-TPLHyAa~~G 718 (845)
+|.++..|+||||+|+..++. .+++++|++ .||++|++|..|+ ||||||+..|
T Consensus 68 ---------------vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~------~Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 68 ---------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE------KGADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp ---------------SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHH------TTCCSSSCBGGGTBCTTGGGGGCC
T ss_pred ---------------CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHH------CCCCCCccCCCcCchHHHHHHHcC
Confidence 577889999999999998753 247999954 6899999999999 9999999954
Q ss_pred C-----HHHHHHHHH-hhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 719 H-----HSYIHLVQR-KINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 719 n-----~e~ieLL~~-kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
+ .+++++|+. +.++-. + +...+.|++|+++..++...++.+..
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~---------~-----------~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLL---------I-----------KDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTT---------C-----------CCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHhcCCCCc---------c-----------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4 456776665 444322 1 44466789999999877777666554
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.75 E-value=1.1e-18 Score=160.63 Aligned_cols=126 Identities=18% Similarity=0.125 Sum_probs=102.7
Q ss_pred CchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChH
Q 003138 602 TSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAE 681 (845)
Q Consensus 602 s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e 681 (845)
+.+..+..|.||||+|++.|+.++|++||++|++ +|.++..|.||||+|+. ++.+
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~-~~~~ 58 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------------PNALNRFGRRPIQVMMM-GSAQ 58 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC------------------------TTCCCTTCCTTTTTSTT-SCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC------------------------cCCcCCCCCCHHHHHHc-CCHH
Confidence 3445567799999999999999999999999876 46678899999999999 7765
Q ss_pred HHHHHhhcCCCCCCcccccCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCC
Q 003138 682 NVLDALTDDPGSVGIEAWKSAQDST-GLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKG 760 (845)
Q Consensus 682 ~VvelLl~~p~~ig~gA~vNakD~~-G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~ 760 (845)
++++|++ .|+++|.+|.. |+||||+|+.+|+.+++++|+++..+-. + +...+
T Consensus 59 -~v~~Ll~------~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---------~-----------~d~~g 111 (136)
T 1d9s_A 59 -VAELLLL------HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---------V-----------CDAWG 111 (136)
T ss_dssp -HHHHHHH------HTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC---------C-----------CSSSS
T ss_pred -HHHHHHH------CCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------c-----------cCCCC
Confidence 8999964 57899999999 9999999999999999999988754321 1 23356
Q ss_pred CCccccccccccchhhhhh
Q 003138 761 NKSSRVLSLQTEKITTKVM 779 (845)
Q Consensus 761 ~~~~~i~~~~~~~~~~~~~ 779 (845)
.|+++++...++...++.+
T Consensus 112 ~tpl~~A~~~~~~~~~~~L 130 (136)
T 1d9s_A 112 RLPVDLAEEQGHRDIARYL 130 (136)
T ss_dssp SCHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHH
Confidence 7889999887665555444
No 85
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.75 E-value=4.4e-18 Score=166.57 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=65.4
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLV 649 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv 649 (845)
++||+|+..|+.++++.|++.+.+ +...+..|.||||.|+..++.+++++|+++|++
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~---------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-------------- 134 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGAD---------PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD-------------- 134 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--------------
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCC---------CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC--------------
Confidence 455555555555555555543211 112233455555555555555555555555544
Q ss_pred hccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCC-CCCCHHHHHHHcCCHHHHHHHHH
Q 003138 650 DRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDS-TGLTPNDYASLRAHHSYIHLVQR 728 (845)
Q Consensus 650 ~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~-~G~TPLHyAa~~Gn~e~ieLL~~ 728 (845)
++.++..|.||||+|+..++..+++++|++ .++++|.+|. .|.||||+|+.+|+.+++++|++
T Consensus 135 ----------~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~------~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (240)
T 3eu9_A 135 ----------VDMMDQNGMTPLMWAAYRTHSVDPTRLLLT------FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE 198 (240)
T ss_dssp ----------TTCCCTTSCCHHHHHHHHCCSSTTHHHHHH------TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred ----------ccccCCCCCcHHHHHHHhCChHHHHHHHHh------cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 455555666666666655443345555533 3455566665 56666666666666666666655
Q ss_pred hh
Q 003138 729 KI 730 (845)
Q Consensus 729 kl 730 (845)
+.
T Consensus 199 ~g 200 (240)
T 3eu9_A 199 AG 200 (240)
T ss_dssp HT
T ss_pred cC
Confidence 53
No 86
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.75 E-value=1.4e-18 Score=184.00 Aligned_cols=148 Identities=18% Similarity=-0.004 Sum_probs=110.6
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNC---RPMVELLLNYAPDNVLDKPGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~---~eIVElLL~~gad~~~~~~~~~~ 645 (845)
.++||+|+..|+.++|++||+.+. +++..+..|+||||+|+.+|+ .++|+.||+++..
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Ga---------d~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~---------- 192 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGS---------NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---------- 192 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTC---------CTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG----------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCC---------CCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc----------
Confidence 478999999999999999987642 223446678899999999888 6888888887521
Q ss_pred hhhhhccCCcccccCCCCCCCCChHHHHHHh----CCChHHHHHHhhcCCCC---------CCc-----cc---------
Q 003138 646 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC----RDDAENVLDALTDDPGS---------VGI-----EA--------- 698 (845)
Q Consensus 646 k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~----~~~~e~VvelLl~~p~~---------ig~-----gA--------- 698 (845)
++|.++..|+||||+|+. .++.+ ++++|++.... +.. |+
T Consensus 193 -------------~~~~~d~~g~tpLh~A~~~~~~~g~~~-~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g 258 (327)
T 1sw6_A 193 -------------CLILEDSMNRTILHHIIITSGMTGCSA-AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGER 258 (327)
T ss_dssp -------------GGGEECTTCCCHHHHHHHHHTSTTCHH-HHHHHHHHHHHHHHHGGGCCEEEC---------------
T ss_pred -------------cccCCCCCCCCHHHHHHHHccccccHH-HHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccC
Confidence 357788899999999998 66654 88888652100 000 11
Q ss_pred ----------------ccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCC
Q 003138 699 ----------------WKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNK 762 (845)
Q Consensus 699 ----------------~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~ 762 (845)
++|.+|.+|+||||+|+.+|+.+++++|+++.++-. + +...+.|
T Consensus 259 ~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~---------~-----------~d~~G~T 318 (327)
T 1sw6_A 259 KDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF---------I-----------ANKSGLR 318 (327)
T ss_dssp -CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT---------C-----------CCTTSCC
T ss_pred CChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------c-----------cCCCCCC
Confidence 589999999999999999999999999998866532 1 3345678
Q ss_pred ccccccc
Q 003138 763 SSRVLSL 769 (845)
Q Consensus 763 ~~~i~~~ 769 (845)
++|+++.
T Consensus 319 pL~~A~~ 325 (327)
T 1sw6_A 319 PVDFGAG 325 (327)
T ss_dssp GGGGTCC
T ss_pred HHHHHHh
Confidence 8988876
No 87
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.75 E-value=3.7e-18 Score=191.62 Aligned_cols=131 Identities=19% Similarity=0.136 Sum_probs=109.4
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHH---cCCHHHHHHHHhcCCCCCCCCCCchhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVR---RNCRPMVELLLNYAPDNVLDKPGSRQK 646 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~---~n~~eIVElLL~~gad~~~~~~~~~~k 646 (845)
..|+.|+..|..++++.||+.+.+.+... .....+..|.||||+||+ .|+.++|++||++|+|
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~---~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~----------- 199 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 199 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCB---CCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCC---CCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----------
Confidence 57999999999999999998764432211 111225569999999977 9999999999999986
Q ss_pred hhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 647 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 647 ~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.+|..|+||||+||..++.+ ++++|++ .||++|++|.+|+||||+|+.+|+.+++++|
T Consensus 200 -------------vn~~d~~g~TpLh~A~~~g~~~-~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 200 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp -------------TTCCCSSSCCHHHHHTTTTCHH-HHHHHHH------TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCccCCCCCcHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 5778889999999999998876 8999964 5899999999999999999999999999999
Q ss_pred HHhhhhcC
Q 003138 727 QRKINKKS 734 (845)
Q Consensus 727 ~~kl~~~~ 734 (845)
+++.++..
T Consensus 260 l~~ga~~~ 267 (497)
T 3lvq_E 260 EQAQAGTF 267 (497)
T ss_dssp HHTCC---
T ss_pred HHhCCCCC
Confidence 99987654
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.74 E-value=8.6e-18 Score=177.71 Aligned_cols=129 Identities=19% Similarity=0.137 Sum_probs=108.2
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHc---CCHHHHHHHHhcCCCCCCCCCCchhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRR---NCRPMVELLLNYAPDNVLDKPGSRQK 646 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~---n~~eIVElLL~~gad~~~~~~~~~~k 646 (845)
..|+.|+..|..++++.||..+.+.+... .....+..|.||||+||.. ++.++|++||++|++
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad----------- 218 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH----------- 218 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCE---ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccC---CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----------
Confidence 57999999999999999997653322100 0001356699999999997 899999999999986
Q ss_pred hhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 647 QLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 647 ~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .||++|++|.+|.||||+|+.+|+.+++++|
T Consensus 219 -------------vn~~d~~G~TpLh~A~~~g~~~-~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~~~~~iv~~L 278 (301)
T 2b0o_E 219 -------------LDAKAADGNTALHYAALYNQPD-CLKLLLK------GRALVGTVNEAGETALDIARKKHHKECEELL 278 (301)
T ss_dssp -------------TTCCCTTCCCHHHHHHHTTCHH-HHHHHHH------TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4677889999999999998876 8999964 5899999999999999999999999999999
Q ss_pred HHhhhh
Q 003138 727 QRKINK 732 (845)
Q Consensus 727 ~~kl~~ 732 (845)
+++.++
T Consensus 279 l~~ga~ 284 (301)
T 2b0o_E 279 EQAQAG 284 (301)
T ss_dssp HHHHHH
T ss_pred HHhcCC
Confidence 998776
No 89
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.74 E-value=4e-18 Score=183.36 Aligned_cols=150 Identities=17% Similarity=0.073 Sum_probs=117.8
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhc-CCcCCCCCCchhhhhccccHHHHHHHcC---CHHHHHHHHhcCCCCCC------
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFD-GTVDTGDHTSSELAILEMGLLHKAVRRN---CRPMVELLLNYAPDNVL------ 638 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~-~~v~~~~~s~~~~~~~G~TpLH~AV~~n---~~eIVElLL~~gad~~~------ 638 (845)
.++||+|+..|+.++++.||+.... .++ ...+..|.||||+|+..+ +.++|++|+++|++++.
T Consensus 200 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 272 (373)
T 2fo1_E 200 RSALHQAAANRDFGMMVYMLNSTKLKGDI-------EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272 (373)
T ss_dssp CCHHHHHHHTTCHHHHHHHTTSHHHHHTT-------SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCccccCh-------hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc
Confidence 4799999999999999999976411 122 233567999999999998 89999999999998874
Q ss_pred -----CCCCchhhhhhhccCCc-------ccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCC
Q 003138 639 -----DKPGSRQKQLVDRAGSG-------FIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDST 706 (845)
Q Consensus 639 -----~~~~~~~k~lv~~~~~~-------~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~ 706 (845)
.+..+++.++..+..+. ...++|.+|..|.||||+|+..++.+ ++++|++ .||++|.+|..
T Consensus 273 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~-iv~~Ll~------~gad~~~~d~~ 345 (373)
T 2fo1_E 273 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQ------QGASVEAVDAT 345 (373)
T ss_dssp SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCSSCCCSS
T ss_pred CcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHH-HHHHHHH------cCCCccCCCCC
Confidence 22335554433221111 12468999999999999999998876 8999965 57899999999
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 707 GLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 707 G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
|+||||+|+.+||.+++++|.++..+
T Consensus 346 g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 346 DHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 99999999999999999999887654
No 90
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=6.1e-18 Score=183.13 Aligned_cols=177 Identities=19% Similarity=0.111 Sum_probs=118.7
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC---CCchh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK---PGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~---~~~~~ 645 (845)
.++||+|+..|..++|+.||+.+.+ + +..+..|.||||+|++.|+.++|++|+++|++++... ..|++
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~--~-------~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGAS--P-------NVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC--S-------CCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCC--C-------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 4799999999999999999986532 2 2335668999999999999999999999998865322 22443
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+.+ ..++|..+..|.||||+|+..++.+ +++.|++ .+++++.+|..|.||||+|+.+|+
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~~~~~~~~~~~g~t~L~~A~~~g~ 158 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVE-TVLALLE------KEASQACMTKKGFTPLHVAAKYGK 158 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHH-HHHHHHH------TTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH-HHHHHHh------CCCCCcCCCCCCCCHHHHHHHcCC
Confidence 33322211111 1246666777777777777776655 6666654 345566677777777777777777
Q ss_pred HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhcc
Q 003138 720 HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQQ 781 (845)
Q Consensus 720 ~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~~ 781 (845)
.+++++|+++..+-. .+...+.|+++.+...++...++.+..
T Consensus 159 ~~~v~~Ll~~g~~~~--------------------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 200 (437)
T 1n11_A 159 VRVAELLLERDAHPN--------------------AAGKNGLTPLHVAVHHNNLDIVKLLLP 200 (437)
T ss_dssp HHHHHHHHHTTCCTT--------------------CCCSSCCCHHHHHHHTTCHHHHHHHGG
T ss_pred HHHHHHHHhCCCCCC--------------------CCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 777777666543221 122345678999988877777666554
No 91
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.73 E-value=1.5e-18 Score=179.99 Aligned_cols=150 Identities=15% Similarity=0.032 Sum_probs=116.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC----CCch
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK----PGSR 644 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~----~~~~ 644 (845)
.++||+|+..|+.++++.||+.+.+ +...+..|+||||+|+..|+.++|++||++|++++... ..|+
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~---------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L 133 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLD---------DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSF 133 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCC---------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCC---------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHH
Confidence 4799999999999999999986532 22346679999999999999999999999999877332 2355
Q ss_pred hhhhhhccCCcccc----cCCCCCC-CCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCH-HHHHHHcC
Q 003138 645 QKQLVDRAGSGFIF----KPNVIGP-AGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTP-NDYASLRA 718 (845)
Q Consensus 645 ~k~lv~~~~~~~~f----~pNa~g~-~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TP-LHyAa~~G 718 (845)
+.++..+..+...+ .++..+. .|.||||+|+..++.+ ++++|++ .|+++|.+|..|+|| ||+|+.+|
T Consensus 134 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~-~v~~Ll~------~gad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 134 YHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVD-MMILLLD------YMTSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHH-HHHHHHH------HHHHTCTTCCCBCCTTHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHH-HHHHHHH------cCCCCCcccCCCCChHHHHHHHcC
Confidence 54443332222111 1333444 8999999999998876 8999954 689999999999998 99999999
Q ss_pred CHHHHHHHHHhhhhcC
Q 003138 719 HHSYIHLVQRKINKKS 734 (845)
Q Consensus 719 n~e~ieLL~~kl~~~~ 734 (845)
+.+++++|+++.++-.
T Consensus 207 ~~~~v~~Ll~~gad~~ 222 (285)
T 3kea_A 207 DIEMLQALFKYDINIY 222 (285)
T ss_dssp CHHHHHHHTTSCBCST
T ss_pred CHHHHHHHHHcCCCCC
Confidence 9999999998876543
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.73 E-value=1.1e-17 Score=151.22 Aligned_cols=111 Identities=24% Similarity=0.138 Sum_probs=93.0
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhh
Q 003138 609 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 688 (845)
Q Consensus 609 ~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl 688 (845)
.|.|+||+|++.|+.++|++||++|++ +|.++..|+||||+|+..++.+ ++++|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~Ll 60 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGED------------------------VNRTLEGGRKPLHYAADCGQLE-ILEFLL 60 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC------------------------TTSCCTTSSCHHHHHHHTTCHH-HHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCC------------------------cCccCCCCCcHHHHHHHcCCHH-HHHHHH
Confidence 478999999999999999999999875 4667889999999999998876 899996
Q ss_pred cCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccccc
Q 003138 689 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLS 768 (845)
Q Consensus 689 ~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~ 768 (845)
+ .|+++|.+|.+|+||||+|+.+|+.+++++|+++..+-. + +...+.|+++++.
T Consensus 61 ~------~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------~-----------~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 61 L------KGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKT---------V-----------KGPDGLTAFEATD 114 (123)
T ss_dssp T------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCHHHHCC
T ss_pred H------cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C-----------cCCCCCCHHHHhC
Confidence 4 578899999999999999999999999999988754422 1 3335567888886
Q ss_pred cc
Q 003138 769 LQ 770 (845)
Q Consensus 769 ~~ 770 (845)
..
T Consensus 115 ~~ 116 (123)
T 3aaa_C 115 NQ 116 (123)
T ss_dssp CH
T ss_pred CH
Confidence 53
No 93
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.72 E-value=3.5e-17 Score=171.54 Aligned_cols=162 Identities=19% Similarity=0.137 Sum_probs=125.1
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhh-hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELA-ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~-~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
.++|+.|+++|+.++||+||+.+. +++ ..+ ..|+||||+||+.|+.+||++||++|++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Ga--dvn-------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~------------ 84 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGA--NVN-------FQEEEGGWTPLHNAVQMSREDIVELLLRHGAD------------ 84 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTC--CTT-------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCC--CCC-------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc------------
Confidence 579999999999999999999763 332 223 3589999999999999999999999986
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHH
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQ 727 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~ 727 (845)
++.++..+.||+|.|+..+... ++..+.. .++++|.+|..|.||||+|+..|+.+++++|.
T Consensus 85 ------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll 145 (337)
T 4g8k_A 85 ------------PVLRKKNGATPFILAAIAGSVK-LLKLFLS------KGADVNECDFYGFTAFMEAAVYGKVKALKFLY 145 (337)
T ss_dssp ------------TTCCCTTCCCHHHHHHHHTCHH-HHHHHHT------TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHH
T ss_pred ------------hhhhccCCCchhHHHHhcccch-hhHHhhh------ccchhhhhccCCCCHHHHHHHcCcHHHHHHHH
Confidence 5677889999999999988765 6777743 57889999999999999999999999999998
Q ss_pred HhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccccccccchhhhhhc
Q 003138 728 RKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 728 ~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
++.++-. .... ...........+.|+||+++..|+...++.+.
T Consensus 146 ~~ga~~~-~~~~---------~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL 188 (337)
T 4g8k_A 146 KRGANVN-LRRK---------TKEDQERLRKGGATALMDAAEKGHVEVLKILL 188 (337)
T ss_dssp HTTCCTT-CCCC---------CC-----CTTCSCCHHHHHHHHTCHHHHHHHH
T ss_pred HcCCCcc-hhhc---------cccccccccCCCCcHHHHHHHCCCHHHHHHHH
Confidence 8866532 0100 00011112234567899998887777666554
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.72 E-value=8.7e-18 Score=154.71 Aligned_cols=121 Identities=20% Similarity=0.188 Sum_probs=100.2
Q ss_pred hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHh
Q 003138 608 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 687 (845)
Q Consensus 608 ~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelL 687 (845)
..+.||||+||+.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGAD------------------------VNAKDEYGLTPLYLATAHGHLE-IVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HHHHH
Confidence 3478999999999999999999999876 4667789999999999998876 89999
Q ss_pred hcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccccc
Q 003138 688 TDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVL 767 (845)
Q Consensus 688 l~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~ 767 (845)
++ .|+++|.+|.+|.||||+|+.+|+.+++++|+++..+-. + +...+.|+++++
T Consensus 67 l~------~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~-----------~~~~g~tpl~~A 120 (136)
T 2jab_A 67 LK------NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN---------A-----------QDKFGKTAFDIS 120 (136)
T ss_dssp HH------TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCHHHHH
T ss_pred HH------cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------C-----------cCCCCCCHHHHH
Confidence 65 578899999999999999999999999999988754321 1 233557889999
Q ss_pred cccccchhhhhh
Q 003138 768 SLQTEKITTKVM 779 (845)
Q Consensus 768 ~~~~~~~~~~~~ 779 (845)
...++...++.+
T Consensus 121 ~~~~~~~~~~~L 132 (136)
T 2jab_A 121 IGNGNEDLAEIL 132 (136)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHCCCHHHHHHH
Confidence 887666555544
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.72 E-value=2e-17 Score=181.10 Aligned_cols=124 Identities=23% Similarity=0.126 Sum_probs=107.4
Q ss_pred chHHHHHHhC-CCHHHHHHHHHhhhcCCcCCCCCCchhhh--hccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchh
Q 003138 569 KWLLEFSMEH-DWCAVVKKLLGILFDGTVDTGDHTSSELA--ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~-g~~aVVk~LLd~l~~~~v~~~~~s~~~~~--~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~ 645 (845)
.++||+|+.. |..++++.||+.+.+ ++ ..+ ..|.||||+|+..++.++|++||++|++
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gad--vn-------~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad---------- 260 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGAD--VN-------WVNGGQDNATPLIQATAANSLLACEFLLQNGAN---------- 260 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCC--TT-------CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCC--CC-------ccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC----------
Confidence 3699999999 999999999986533 22 223 5699999999999999999999999986
Q ss_pred hhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHH
Q 003138 646 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 725 (845)
Q Consensus 646 k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieL 725 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .||++|++|.+|.||||+|+..|+.+++++
T Consensus 261 --------------vn~~d~~G~TpLh~A~~~g~~~-~v~~LL~------~Gad~~~~d~~G~TpL~~A~~~g~~~iv~l 319 (368)
T 3jue_A 261 --------------VNQADSAGRGPLHHATILGHTG-LACLFLK------RGADLGARDSEGRDPLTIAMETANADIVTL 319 (368)
T ss_dssp --------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred --------------CCCCCCCCCCHHHHHHHcCcHH-HHHHHHH------CcCCCCCcCCCCCCHHHHHHHCCCHHHHHH
Confidence 5677889999999999998876 8999965 578999999999999999999999999999
Q ss_pred HHHhhhh
Q 003138 726 VQRKINK 732 (845)
Q Consensus 726 L~~kl~~ 732 (845)
|+....+
T Consensus 320 Ll~~~~~ 326 (368)
T 3jue_A 320 LRLAKMR 326 (368)
T ss_dssp HHHHHC-
T ss_pred HHHcCCC
Confidence 9877543
No 96
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.71 E-value=2e-17 Score=161.85 Aligned_cols=175 Identities=16% Similarity=0.095 Sum_probs=105.3
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCC----CCchh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDK----PGSRQ 645 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~----~~~~~ 645 (845)
++|++|+..|..++++.|++.+.+ + ...+..|.||||+|++.|+.++|++|+++|++.+... ..+++
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g~~--~-------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAGYD--V-------RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTTCC--T-------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred hHHHHHHHcCChHHHHHHHHcCCC--c-------CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 679999999999999999986522 2 2335669999999999999999999999998754211 11222
Q ss_pred hhhhhccCCcc------cccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCC
Q 003138 646 KQLVDRAGSGF------IFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAH 719 (845)
Q Consensus 646 k~lv~~~~~~~------~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn 719 (845)
.++..+..+.+ ..+++.++..|.||||+|+..++.+ ++++|++ .|++++.+|..|.||||+|+.+++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~-~~~~Ll~------~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTS-IVAYLIA------KGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH-HHHHHHH------TTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHH-HHHHHHh------cCCCccccCCCCCcHHHHHHHhCC
Confidence 22221111110 1244555556666666666655543 5666543 345556666666666666665544
Q ss_pred -HHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCC-CCCCCccccccccccchhhhhhc
Q 003138 720 -HSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKP-LKGNKSSRVLSLQTEKITTKVMQ 780 (845)
Q Consensus 720 -~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~-~~~~~~~~i~~~~~~~~~~~~~~ 780 (845)
.+++++|.++..+-. .+. ..+.|++|++...++...++.+.
T Consensus 155 ~~~~~~~L~~~~~~~~--------------------~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVN--------------------LGDKYHKNTALHWAVLAGNTTVISLLL 197 (240)
T ss_dssp SSTTHHHHHHTTCCTT--------------------CCCTTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred hHHHHHHHHhcCCCcc--------------------hhhccCCCcHHHHHHHcCCHHHHHHHH
Confidence 455555555433321 111 13456788887766655555444
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=2.5e-17 Score=146.82 Aligned_cols=95 Identities=29% Similarity=0.318 Sum_probs=85.6
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHH
Q 003138 607 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 686 (845)
Q Consensus 607 ~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vvel 686 (845)
+..|.||||+|+..++.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~~~~ 60 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------VNARSKDGNTPLHLAAKNGHAE-IVKL 60 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCC------------------------SSCCCSSSCCTTHHHHTTTCHH-HHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCcCCCCCCHHHHHHHcCcHH-HHHH
Confidence 55799999999999999999999999876 4667789999999999998876 8999
Q ss_pred hhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 687 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 687 Ll~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
|++ .|+++|.+|..|+||||+|+.+|+.+++++|+++.++
T Consensus 61 Ll~------~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 61 LLA------KGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp HTT------TTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred HHH------cCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 954 5789999999999999999999999999999988665
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.69 E-value=5.3e-17 Score=160.68 Aligned_cols=123 Identities=16% Similarity=0.096 Sum_probs=100.9
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHH
Q 003138 607 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 686 (845)
Q Consensus 607 ~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vvel 686 (845)
+..|.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~v~~ 124 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG------------------------VNGLDKAGSTALYWACHGGHKD-IVEM 124 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC------------------------ccccCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45689999999999999999999999876 4667889999999999998876 8999
Q ss_pred hhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccc
Q 003138 687 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRV 766 (845)
Q Consensus 687 Ll~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i 766 (845)
|++. .|+++|.+|.+|+||||+|+.+|+.+++++|+++.++.. + ++..+.|++++
T Consensus 125 Ll~~-----~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---------~-----------~~~~g~t~l~~ 179 (222)
T 3ehr_A 125 LFTQ-----PNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD---------L-----------RNIEKKLAFDM 179 (222)
T ss_dssp HTTS-----TTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC---------C-----------CCTTSCCHHHH
T ss_pred HHcC-----CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---------c-----------ccCCCCCHHHH
Confidence 9642 278899999999999999999999999999998865432 1 33456788999
Q ss_pred ccccccchhhhhh
Q 003138 767 LSLQTEKITTKVM 779 (845)
Q Consensus 767 ~~~~~~~~~~~~~ 779 (845)
+...+....++.+
T Consensus 180 A~~~~~~~~l~~l 192 (222)
T 3ehr_A 180 ATNAACASLLKKK 192 (222)
T ss_dssp CCSHHHHHHHC--
T ss_pred hcchhHHHHHHHH
Confidence 9886655555443
No 99
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.69 E-value=5.4e-17 Score=144.11 Aligned_cols=120 Identities=27% Similarity=0.279 Sum_probs=98.5
Q ss_pred ccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhh
Q 003138 609 LEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALT 688 (845)
Q Consensus 609 ~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl 688 (845)
.|+||||+|++.|+.++|++|+++|++ ++.++..|.||||+|+..++.+ ++++|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------------~~~~~~~g~t~L~~A~~~~~~~-~~~~Ll 55 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD------------------------VNAKDKNGRTPLHLAARNGHLE-VVKLLL 55 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC------------------------TTCCCTTSCCHHHHHHHHTCHH-HHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC------------------------CCCcCCCCCcHHHHHHHcCcHH-HHHHHH
Confidence 378999999999999999999999876 4566788999999999998876 899996
Q ss_pred cCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccccc
Q 003138 689 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLS 768 (845)
Q Consensus 689 ~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~ 768 (845)
+ .|++++.+|..|.||||+|+..|+.+++++|+++..+-. .+...+.|+++++.
T Consensus 56 ~------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~--------------------~~~~~g~t~l~~A~ 109 (126)
T 1n0r_A 56 E------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN--------------------AKDKNGRTPLHLAA 109 (126)
T ss_dssp H------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--------------------CCCTTSCCHHHHHH
T ss_pred H------cCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCc--------------------ccCCCCCCHHHHHH
Confidence 5 478899999999999999999999999999987744321 12234567899988
Q ss_pred ccccchhhhhh
Q 003138 769 LQTEKITTKVM 779 (845)
Q Consensus 769 ~~~~~~~~~~~ 779 (845)
..++...++.+
T Consensus 110 ~~~~~~~~~~L 120 (126)
T 1n0r_A 110 RNGHLEVVKLL 120 (126)
T ss_dssp HTTCHHHHHHH
T ss_pred HcCcHHHHHHH
Confidence 87666555544
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.69 E-value=5.1e-17 Score=164.46 Aligned_cols=125 Identities=18% Similarity=0.124 Sum_probs=102.8
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHH
Q 003138 607 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 686 (845)
Q Consensus 607 ~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vvel 686 (845)
+..+.||||+|++.|+.++|++||++|++ +|.+|..|.||||+|+..++.+ ++++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~d~~g~tpLh~A~~~g~~~-~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKEMND------------------------PSQPNEEGITALHNAICGANYS-IVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHHSSC------------------------TTCCCTTSCCHHHHHHHTTCHH-HHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhcCCC------------------------CCCCCCCCCCHHHHHHHcCCHH-HHHH
Confidence 45588999999999999999999999876 5677889999999999998876 8999
Q ss_pred hhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccc
Q 003138 687 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRV 766 (845)
Q Consensus 687 Ll~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i 766 (845)
|++ .|+++|.+|.+|+||||+|+.+|+.+++++|+++..+-. . ..+..+.|++++
T Consensus 73 Ll~------~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~---------~----------~~~~~g~tpL~~ 127 (229)
T 2vge_A 73 LIT------AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF---------A----------TTLSDGATAFEK 127 (229)
T ss_dssp HHH------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---------C----------CCSSTTCCTGGG
T ss_pred HHH------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---------c----------ccCCCCCCHHHH
Confidence 965 578999999999999999999999999999998755432 0 011356788999
Q ss_pred c--cccccchhhhhhcc
Q 003138 767 L--SLQTEKITTKVMQQ 781 (845)
Q Consensus 767 ~--~~~~~~~~~~~~~~ 781 (845)
+ ...++...++.+..
T Consensus 128 A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 128 CDPYREGYADCATYLAD 144 (229)
T ss_dssp CCTTSTTHHHHHHHHHH
T ss_pred HHHHhcChHHHHHHHHH
Confidence 8 77666666666654
No 101
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.68 E-value=5e-17 Score=152.99 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=101.9
Q ss_pred hhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHH
Q 003138 607 AILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDA 686 (845)
Q Consensus 607 ~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vvel 686 (845)
+..|.||||+|++.|+.++|++||++|++ +|.++..|.||||+|+ .++.+ ++++
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------~~~~~~~g~t~L~~A~-~~~~~-~v~~ 62 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN------------------------PNAPNSYGRRPIQVMM-MGSAR-VAEL 62 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC------------------------TTCCCSSSCCTTTSSC-TTCHH-HHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC------------------------CCCCCCCCCCHHHHHH-cCCHH-HHHH
Confidence 45689999999999999999999999876 4667789999999985 66665 8999
Q ss_pred hhcCCCCCCcccccCCcCCCCCC-HHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccc
Q 003138 687 LTDDPGSVGIEAWKSAQDSTGLT-PNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSR 765 (845)
Q Consensus 687 Ll~~p~~ig~gA~vNakD~~G~T-PLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~ 765 (845)
|++ .|+++|.+|..|+| |||+|+.+|+.+++++|+++.++-. + +...+.|+++
T Consensus 63 Ll~------~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~---------~-----------~d~~g~tpl~ 116 (156)
T 1bi7_B 63 LLL------HGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---------V-----------RDAWGRLPVD 116 (156)
T ss_dssp HHT------TTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS---------C-----------CCTTCCCHHH
T ss_pred HHH------cCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc---------c-----------cCCCCCCHHH
Confidence 964 57899999999999 9999999999999999998755422 1 2335678899
Q ss_pred cccccccchhhhhhccccH
Q 003138 766 VLSLQTEKITTKVMQQQCR 784 (845)
Q Consensus 766 i~~~~~~~~~~~~~~~~C~ 784 (845)
++...++...++.+..+-.
T Consensus 117 ~A~~~~~~~~v~~Ll~~ga 135 (156)
T 1bi7_B 117 LAEELGHRDVARYLRAAAG 135 (156)
T ss_dssp HHHHHTCHHHHHHHSSCC-
T ss_pred HHHHhCHHHHHHHHHHcCC
Confidence 9998777777666655433
No 102
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.67 E-value=9.8e-17 Score=143.69 Aligned_cols=90 Identities=26% Similarity=0.224 Sum_probs=80.2
Q ss_pred hhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHH
Q 003138 606 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 685 (845)
Q Consensus 606 ~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vve 685 (845)
.+..|.|+||+|+..|+.++|++||++|++ +|.+|..|.||||+|+..++.+ +++
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~------------------------i~~~d~~g~tpLh~A~~~~~~~-~v~ 74 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGAD------------------------VAAKDKNGSTPLHLAARNGHLE-VVK 74 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCC------------------------TTCCCTTCCCHHHHHHHTTCHH-HHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCC------------------------CCccCCCCCCHHHHHHHcCCHH-HHH
Confidence 345688999999999999999999999876 4667889999999999998876 899
Q ss_pred HhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHH
Q 003138 686 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLV 726 (845)
Q Consensus 686 lLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL 726 (845)
+|++ .|+++|.+|..|+||||+|+.+|+.+++++|
T Consensus 75 ~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 75 LLLE------AGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHH------cCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9964 5788999999999999999999999999987
No 103
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.67 E-value=2.7e-17 Score=174.17 Aligned_cols=123 Identities=12% Similarity=-0.040 Sum_probs=94.9
Q ss_pred hHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchh-hhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 570 WLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSE-LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 570 ~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~-~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++|.|+..+..++++.|++.+. +++. .+..|+||||+|++.|+.++|++||++|++
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~---------dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad------------- 156 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQL---------NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN------------- 156 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCC---------CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred chhHHHHHhhHHHHHHHHHhcCC---------CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 35677787777888888876432 2223 467799999999999999999999999986
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCC---hHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHH----cCCHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDD---AENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASL----RAHHS 721 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~---~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~----~Gn~e 721 (845)
+|.+|..|+||||+|+..++ .+ +++.|++. ..+++|.+|..|+||||+|+. .|+.+
T Consensus 157 -----------~n~~d~~g~TpLh~A~~~g~~~~~~-~~~~ll~~-----~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~ 219 (327)
T 1sw6_A 157 -----------RLYGDNMGESCLVKAVKSVNNYDSG-TFEALLDY-----LYPCLILEDSMNRTILHHIIITSGMTGCSA 219 (327)
T ss_dssp -----------TTBCCTTCCCHHHHHHHSSHHHHTT-CHHHHHHH-----HGGGGGEECTTCCCHHHHHHHHHTSTTCHH
T ss_pred -----------CCCcCCCCCCHHHHHHHhcccccHH-HHHHHHHh-----hhccccCCCCCCCCHHHHHHHHccccccHH
Confidence 57788899999999999865 33 34444331 126789999999999999999 89999
Q ss_pred HHHHHHHhhh
Q 003138 722 YIHLVQRKIN 731 (845)
Q Consensus 722 ~ieLL~~kl~ 731 (845)
++++|+++..
T Consensus 220 ~v~~Ll~~~~ 229 (327)
T 1sw6_A 220 AAKYYLDILM 229 (327)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987754
No 104
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.65 E-value=7.4e-17 Score=155.99 Aligned_cols=96 Identities=17% Similarity=0.107 Sum_probs=84.8
Q ss_pred hhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHH
Q 003138 605 ELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVL 684 (845)
Q Consensus 605 ~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vv 684 (845)
..+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ ++
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~~~~~-~v 92 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CV 92 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSC------------------------TTCCCTTSCCHHHHHHHHTCHH-HH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCC------------------------CCCcCCCCCCHHHHHHHcCCHH-HH
Confidence 335568999999999999999999999 765 5777889999999999998876 89
Q ss_pred HHhhcCCCCCCcccccCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 685 DALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 685 elLl~~p~~ig~gA~vNakD-~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
++|++ .|+++|.+| .+|+||||+|+.+|+.+++++|+++.++
T Consensus 93 ~~Ll~------~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 135 (183)
T 3deo_A 93 RLLAE------AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 135 (183)
T ss_dssp HHHHH------TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHH------cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCC
Confidence 99965 578899999 8999999999999999999999987554
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.62 E-value=3.2e-17 Score=179.83 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=100.0
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
+++||+|+..|+.++|+.||+.+.... .....+..|.||||+|+++|+.++|++||++|++...
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~------~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~---------- 156 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDE------IVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM---------- 156 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCS------SCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH----------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHH------HHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc----------
Confidence 489999999999999999998653110 0112234578999999999999999999999986310
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCC--cCCCCCCHHHHHH-HcCCHHHHHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSA--QDSTGLTPNDYAS-LRAHHSYIHL 725 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNa--kD~~G~TPLHyAa-~~Gn~e~ieL 725 (845)
.+++.. + .||||+||..|+.+ ++++|++ .|++++. +|.+|+||||+|+ .+||.+++++
T Consensus 157 ---------~~i~~~--~-~TpLh~Aa~~G~~e-iv~~Ll~------~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 157 ---------AMIQAE--N-YHAFRLAAENGHLH-VLNRLCE------LAPTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp ---------HHHSHH--H-HHHHHHHHHTTCHH-HHHHHHH------SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred ---------cccCCC--C-CCHHHHHHHCCCHH-HHHHHHH------cCCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 012222 2 99999999998876 8999964 5788887 8999999999999 9999999999
Q ss_pred HHHhhh
Q 003138 726 VQRKIN 731 (845)
Q Consensus 726 L~~kl~ 731 (845)
|+++.+
T Consensus 218 Ll~~ga 223 (376)
T 2aja_A 218 LLDCPV 223 (376)
T ss_dssp HTTSHH
T ss_pred HHhCCC
Confidence 987543
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.61 E-value=2.5e-16 Score=160.13 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=84.5
Q ss_pred hhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHH
Q 003138 606 LAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLD 685 (845)
Q Consensus 606 ~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~Vve 685 (845)
.+..|.||||+|++.|+.++|++||+ |++ +|.+|..|+||||+|+..++.+ +++
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~------------------------~~~~d~~g~t~L~~A~~~g~~~-~v~ 94 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRD------------------------VDAVDENGRTALLFVAGLGSDK-CVR 94 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCC------------------------TTCBCTTSCBHHHHHHHHTCHH-HHH
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCC------------------------CCCcCCCCCCHHHHHHHCCCHH-HHH
Confidence 34568999999999999999999999 765 5777889999999999998876 899
Q ss_pred HhhcCCCCCCcccccCCcC-CCCCCHHHHHHHcCCHHHHHHHHHhhhh
Q 003138 686 ALTDDPGSVGIEAWKSAQD-STGLTPNDYASLRAHHSYIHLVQRKINK 732 (845)
Q Consensus 686 lLl~~p~~ig~gA~vNakD-~~G~TPLHyAa~~Gn~e~ieLL~~kl~~ 732 (845)
+|++ .|+++|.+| ..|+||||+|+.+|+.+++++|+++.++
T Consensus 95 ~Ll~------~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 136 (244)
T 3ui2_A 95 LLAE------AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGAD 136 (244)
T ss_dssp HHHH------TTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHH------cCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 9964 578999999 8899999999999999999999988654
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.59 E-value=8.8e-16 Score=136.79 Aligned_cols=103 Identities=25% Similarity=0.182 Sum_probs=86.4
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
+++||+|+..|..++++.||+.+.+ + ...+..|.||||+|+..++.++|++||++|++
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~--~-------~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------- 67 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGAD--V-------NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD------------- 67 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCC--S-------SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC--C-------CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------------
Confidence 4799999999999999999976422 2 23456799999999999999999999999876
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHH
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPN 711 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPL 711 (845)
+|.++..|.||||+|+..++.+ ++++|++ .||++|.+|..|.||-
T Consensus 68 -----------~~~~d~~g~tpl~~A~~~~~~~-~~~~Ll~------~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 -----------VNARSKDGNTPEHLAKKNGHHE-IVKLLDA------KGADVNARSWGSSHHH 112 (115)
T ss_dssp -----------TTCCCTTCCCTTHHHHTTTCHH-HHHHHHT------TSSSHHHHSCCCC---
T ss_pred -----------CcccCCCCCCHHHHHHHCCCHH-HHHHHHH------cCCCCCcCCccccccc
Confidence 4667789999999999998776 8999964 6899999999999984
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.56 E-value=6.7e-15 Score=127.16 Aligned_cols=88 Identities=30% Similarity=0.275 Sum_probs=75.5
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
+++||+|+..|..++++.||+.+. +++..+..|.||||+|+..++.++|++||++|++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~---------~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------------- 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGA---------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD------------- 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC---------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCC---------CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------------
Confidence 378999999999999999998652 2234467799999999999999999999999986
Q ss_pred hhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcC
Q 003138 649 VDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDD 690 (845)
Q Consensus 649 v~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~ 690 (845)
+|.+|..|.||||+|+..++.+ ++++|++.
T Consensus 61 -----------~~~~d~~g~t~l~~A~~~~~~~-~~~~Ll~~ 90 (93)
T 1n0q_A 61 -----------VNAKDKNGRTPLHLAARNGHLE-VVKLLLEA 90 (93)
T ss_dssp -----------TTCCCTTSCCHHHHHHHTTCHH-HHHHHHHT
T ss_pred -----------CCccCCCCCCHHHHHHHcCCHH-HHHHHHHc
Confidence 4677889999999999998876 89999653
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.56 E-value=1.8e-15 Score=159.92 Aligned_cols=106 Identities=20% Similarity=0.083 Sum_probs=83.6
Q ss_pred chHHHHHHhC---CCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchh
Q 003138 569 KWLLEFSMEH---DWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQ 645 (845)
Q Consensus 569 ~~LL~fAve~---g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~ 645 (845)
.++||+|+.. |..+++++||+.+. +++ ..+..|+||||+|+..|+.++|++||++|++
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~ga--dvn-------~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---------- 251 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGG--HLD-------AKAADGNTALHYAALYNQPDCLKLLLKGRAL---------- 251 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSS--CTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCC--CCC-------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 5899999987 89999999998753 332 3466799999999999999999999999986
Q ss_pred hhhhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCH
Q 003138 646 KQLVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHH 720 (845)
Q Consensus 646 k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~ 720 (845)
+|.+|..|.||||+|+..++.+ ++++|++ .|++ .|.||||+|+..|+.
T Consensus 252 --------------~~~~d~~G~TpL~~A~~~~~~~-iv~~Ll~------~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 252 --------------VGTVNEAGETALDIARKKHHKE-CEELLEQ------AQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp --------------CSCCCTTSCCHHHHHHHHTCHH-HHHHHHH------HHHH------TTSSCCC--------
T ss_pred --------------CCCcCCCCCCHHHHHHHcCCHH-HHHHHHH------hcCC------CCCChhHHHHhcCCc
Confidence 5778889999999999998875 8999964 4553 689999999998874
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.50 E-value=3.9e-14 Score=147.98 Aligned_cols=126 Identities=15% Similarity=0.083 Sum_probs=101.8
Q ss_pred cccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHhC---CChHHHHHH
Q 003138 610 EMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAACR---DDAENVLDA 686 (845)
Q Consensus 610 G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~---~~~e~Vvel 686 (845)
..++||.|++.++.+.|+.|+..|++.+. .+.++..+..|.||||+||.. ++. +++++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~------------------~~~l~~~~~~g~t~Lh~A~~~~~~~~~-~~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTE------------------KIPLANGHEPDETALHLAVRSVDRTSL-HIVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTS------------------BCCCSSCSSTTCBHHHHHHHHCCTTTH-HHHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhh------------------hccccccccCCCCcchHHHHhcccchH-HHHHH
Confidence 45899999999999999999999987531 112566678899999999998 555 48999
Q ss_pred hhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccc
Q 003138 687 LTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRV 766 (845)
Q Consensus 687 Ll~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i 766 (845)
|++ .||++|.+|.+|+||||+|+.+|+.+++++|+++.++-. + +...+.|++|+
T Consensus 191 Ll~------~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~---------~-----------~d~~g~tpL~~ 244 (278)
T 1dcq_A 191 LVQ------NSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE---------I-----------ANESGETPLDI 244 (278)
T ss_dssp HHH------HCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCHHHH
T ss_pred HHH------CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C-----------ccCCCCCHHHH
Confidence 964 689999999999999999999999999999998766432 1 33456789999
Q ss_pred ccccccchhhhhhc
Q 003138 767 LSLQTEKITTKVMQ 780 (845)
Q Consensus 767 ~~~~~~~~~~~~~~ 780 (845)
++..++...++.+.
T Consensus 245 A~~~~~~~~v~~Ll 258 (278)
T 1dcq_A 245 AKRLKHEHCEELLT 258 (278)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHH
Confidence 99876666655544
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.49 E-value=4.1e-14 Score=154.94 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=100.3
Q ss_pred ccccHHHHHHHc-CCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCC--CCCChHHHHHHhCCChHHHHH
Q 003138 609 LEMGLLHKAVRR-NCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIG--PAGLTPLHVAACRDDAENVLD 685 (845)
Q Consensus 609 ~G~TpLH~AV~~-n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g--~~G~TPLHiAA~~~~~e~Vve 685 (845)
.+.|+||+|+.. ++.++|++||++|+++ |..+ ..|.||||+|+..++.+ +++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv------------------------n~~~~~~~g~TpLh~Aa~~g~~~-iv~ 252 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV------------------------NWVNGGQDNATPLIQATAANSLL-ACE 252 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT------------------------TCCCTTTTCCCHHHHHHHTTCHH-HHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC------------------------CccccccCCCCHHHHHHHCCCHH-HHH
Confidence 456999999999 9999999999999874 4444 68999999999998876 899
Q ss_pred HhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCccc
Q 003138 686 ALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSR 765 (845)
Q Consensus 686 lLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~ 765 (845)
+|++ .||++|.+|..|+||||+|+..|+.+++++|+++.++-. + +...+.|+++
T Consensus 253 ~LL~------~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~---------~-----------~d~~G~TpL~ 306 (368)
T 3jue_A 253 FLLQ------NGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG---------A-----------RDSEGRDPLT 306 (368)
T ss_dssp HHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---------C-----------CCTTSCCHHH
T ss_pred HHHH------cCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC---------C-----------cCCCCCCHHH
Confidence 9965 578999999999999999999999999999998755422 1 3345678899
Q ss_pred cccccccchhhhhhc
Q 003138 766 VLSLQTEKITTKVMQ 780 (845)
Q Consensus 766 i~~~~~~~~~~~~~~ 780 (845)
++...++..+++.+.
T Consensus 307 ~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 307 IAMETANADIVTLLR 321 (368)
T ss_dssp HHHHTTCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHH
Confidence 999887776665554
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.48 E-value=3.7e-15 Score=163.47 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=95.2
Q ss_pred chHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhh
Q 003138 569 KWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQL 648 (845)
Q Consensus 569 ~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~l 648 (845)
.++||+|+.+|+.++|++||+.+.+... .+.. +. +.||||+|+++|+.+||++||++|++.
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~----~~i~--~~-~~TpLh~Aa~~G~~eiv~~Ll~~ga~~------------ 189 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPTEIM----AMIQ--AE-NYHAFRLAAENGHLHVLNRLCELAPTE------------ 189 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTTTHH----HHHS--HH-HHHHHHHHHHTTCHHHHHHHHHSCGGG------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCccc----cccC--CC-CCCHHHHHHHCCCHHHHHHHHHcCCcc------------
Confidence 4699999999999999999986521000 0111 12 289999999999999999999999762
Q ss_pred hhccCCcccccCCC--CCCCCChHHHHHH-hCCChHHHHHHhhcCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHH
Q 003138 649 VDRAGSGFIFKPNV--IGPAGLTPLHVAA-CRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHL 725 (845)
Q Consensus 649 v~~~~~~~~f~pNa--~g~~G~TPLHiAA-~~~~~e~VvelLl~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieL 725 (845)
+. ++..|.||||+|| ..|+.+ ++++|+++ |+ .|.||||+|+.+|+.+++++
T Consensus 190 ------------~~~~~d~~g~TpL~~Aa~~~G~~e-iv~~Ll~~------ga-------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 190 ------------ATAMIQAENYYAFRWAAVGRGHHN-VINFLLDC------PV-------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp ------------HHHHHHHHHHHHHHHHHSTTCCHH-HHHHHTTS------HH-------HHHHHHHCTTTTTTTTHHHH
T ss_pred ------------chhccCCCCCCHHHHHHHHCCCHH-HHHHHHhC------CC-------ccchHHHHHHHCCCHHHHHH
Confidence 22 4557999999999 988776 99999653 33 38999999999999999999
Q ss_pred HHHhhhh
Q 003138 726 VQRKINK 732 (845)
Q Consensus 726 L~~kl~~ 732 (845)
|.++.++
T Consensus 244 L~~~ga~ 250 (376)
T 2aja_A 244 IARHVNR 250 (376)
T ss_dssp HHHHHHH
T ss_pred HHhcCcc
Confidence 9988765
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.47 E-value=4.4e-14 Score=158.57 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=99.1
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhhhhhccCCcccccCCCCCCCCChHHHHHHh---CCChHHHHHHhh
Q 003138 612 GLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAGSGFIFKPNVIGPAGLTPLHVAAC---RDDAENVLDALT 688 (845)
Q Consensus 612 TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~lv~~~~~~~~f~pNa~g~~G~TPLHiAA~---~~~~e~VvelLl 688 (845)
+.||.||+.|+.++|+.||++|++++.. +.....+..|.||||+|+. .++.+ ++++|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~------------------~~~~~~~~~g~t~Lh~A~~~a~~g~~~-~v~~Ll 194 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQP------------------LPGPDAQAPEELVLHLAVKVANQASLP-LVDFII 194 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSC------------------BCCSSSCCSCBCHHHHHHHTCCTTTHH-HHHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCC------------------CCCcccccccchHHHHHHHhcccccHH-HHHHHH
Confidence 7899999999999999999999885421 1122346789999999954 66665 899996
Q ss_pred cCCCCCCcccccCCcCCCCCCHHHHHHHcCCHHHHHHHHHhhhhcCCCCCceEEecCCCcccccccCCCCCCCCcccccc
Q 003138 689 DDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPLKGNKSSRVLS 768 (845)
Q Consensus 689 ~~p~~ig~gA~vNakD~~G~TPLHyAa~~Gn~e~ieLL~~kl~~~~~~~~~v~l~I~~~~~~~~~~~k~~~~~~~~~i~~ 768 (845)
+ .||++|++|.+|+||||+|+.+|+.+++++|+++.++-. + +...+.|++|+++
T Consensus 195 ~------~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~---------~-----------~d~~g~tpl~~A~ 248 (497)
T 3lvq_E 195 Q------NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVG---------T-----------VNEAGETALDIAR 248 (497)
T ss_dssp H------HSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCS---------C-----------CCTTCCCHHHHHH
T ss_pred H------cCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------C-----------cCCCCCCHHHHHH
Confidence 4 689999999999999999999999999999998866532 1 3345678899988
Q ss_pred ccccchhhhhhcc
Q 003138 769 LQTEKITTKVMQQ 781 (845)
Q Consensus 769 ~~~~~~~~~~~~~ 781 (845)
..|+...++.+..
T Consensus 249 ~~~~~~~~~~Ll~ 261 (497)
T 3lvq_E 249 KKHHKECEELLEQ 261 (497)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 8877776655443
No 114
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.43 E-value=1.2e-14 Score=130.97 Aligned_cols=38 Identities=66% Similarity=1.021 Sum_probs=33.7
Q ss_pred CCCCccCccccCCcchHHHHhhhhhhccCCCCCCCcCC
Q 003138 1 MGRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDNVVN 38 (845)
Q Consensus 1 c~rfh~l~~f~~~krscr~~l~~h~~rrr~~~~~~~~~ 38 (845)
|+|||+|+|||+.|||||+||++||+||||+++++...
T Consensus 55 CsrFH~L~eFD~~kRSCR~rL~~hn~RRRk~~~~~~~~ 92 (94)
T 1ul4_A 55 CSRFHDLQEFDEAKRSCRRRLAGHNERRRKSSGESGPS 92 (94)
T ss_dssp TSSEEETTTCCSSCCSCSTTTTCCCCCCCSCCCC----
T ss_pred HhccCCHHHhccccchHHHHHHHHHHHhccCCCCcCCC
Confidence 99999999999999999999999999999999998654
No 115
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.40 E-value=7.4e-13 Score=118.38 Aligned_cols=86 Identities=19% Similarity=0.107 Sum_probs=74.0
Q ss_pred cchHHHHHHhCCCHHHHHHHHHhhhcCCcCCCCCCchhhhhccccHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCchhhh
Q 003138 568 FKWLLEFSMEHDWCAVVKKLLGILFDGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQ 647 (845)
Q Consensus 568 f~~LL~fAve~g~~aVVk~LLd~l~~~~v~~~~~s~~~~~~~G~TpLH~AV~~n~~eIVElLL~~gad~~~~~~~~~~k~ 647 (845)
..++||+|+..|..++++.||+.+. ++ +..+..|.||||+|+..|+.++|++||++|++
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~g~--~i-------~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~------------ 82 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMANGA--DV-------AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD------------ 82 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTC--CT-------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC------------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCC--CC-------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------
Confidence 4689999999999999999998642 22 23466799999999999999999999999976
Q ss_pred hhhccCCcccccCCCCCCCCChHHHHHHhCCChHHHHHHh
Q 003138 648 LVDRAGSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDAL 687 (845)
Q Consensus 648 lv~~~~~~~~f~pNa~g~~G~TPLHiAA~~~~~e~VvelL 687 (845)
+|.+|..|+||||+|+..++.+ ++++|
T Consensus 83 ------------~~~~d~~g~tpl~~A~~~~~~~-~~~~L 109 (110)
T 2zgd_A 83 ------------VXAQDKFGKTAFDISIDNGNED-LAEIL 109 (110)
T ss_dssp ------------TTCCCTTSCCHHHHHHHHTCHH-HHHHH
T ss_pred ------------ccccccCCCcHHHHHHHcCCHH-HHHHh
Confidence 4667889999999999998876 88887
No 116
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.33 E-value=1.1e-13 Score=123.49 Aligned_cols=35 Identities=57% Similarity=1.107 Sum_probs=33.0
Q ss_pred CCCCccCccccCCcchHHHHhhhhhhccCCCCCCC
Q 003138 1 MGRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDN 35 (845)
Q Consensus 1 c~rfh~l~~f~~~krscr~~l~~h~~rrr~~~~~~ 35 (845)
|+|||+|+|||+.|||||+||++||+||||++++.
T Consensus 50 C~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~~~~ 84 (88)
T 1ul5_A 50 CGKFHLLPDFDEGKRSCRRKLERHNNRRKRKPVDK 84 (88)
T ss_dssp TSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCSCSS
T ss_pred hccccChhhhccccchHHHHHHHHHHHhccCCccC
Confidence 99999999999999999999999999999877765
No 117
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=56.49 E-value=37 Score=30.40 Aligned_cols=45 Identities=11% Similarity=0.089 Sum_probs=38.6
Q ss_pred ceeeeeeceeeecCCceEEEEEeccCCCCCceEEEEecCceeeeee
Q 003138 399 CRISSIKPIAVPVSERVKFVVKGFNLSRSTTRLLCAIEGSYLVQET 444 (845)
Q Consensus 399 p~i~~V~P~Av~ag~~~~~~v~G~NL~~p~~rllc~~~G~Yl~~e~ 444 (845)
=.|..++|-+-..+..+.++|.|.+|.. +..+.|.|.+.-..++.
T Consensus 7 ~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~ 51 (95)
T 2cxk_A 7 GMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASL 51 (95)
T ss_dssp SCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEE
T ss_pred EEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEE
Confidence 4899999999999999999999999964 46899999887666655
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=48.33 E-value=27 Score=31.21 Aligned_cols=39 Identities=26% Similarity=0.229 Sum_probs=32.2
Q ss_pred CceeeeeeceeeecCCceEEEEEeccCCCCCceE-EEEecCc
Q 003138 398 SCRISSIKPIAVPVSERVKFVVKGFNLSRSTTRL-LCAIEGS 438 (845)
Q Consensus 398 ~p~i~~V~P~Av~ag~~~~~~v~G~NL~~p~~rl-lc~~~G~ 438 (845)
-|+|..++|..-..| +.+.++|.||......+ -+.+.|.
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 479999999998665 99999999998876655 4788873
No 119
>1pby_A Quinohemoprotein amine dehydrogenase 60 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: a.3.1.7 a.3.1.7 b.1.18.14 b.1.18.14 b.61.4.1 PDB: 1jju_A*
Probab=22.39 E-value=1.5e+02 Score=34.01 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=35.8
Q ss_pred ccCCCCceeeeeeceeeecCCceEEEEEeccCCC-----CCceEEEEec
Q 003138 393 LKSHKSCRISSIKPIAVPVSERVKFVVKGFNLSR-----STTRLLCAIE 436 (845)
Q Consensus 393 ~~s~~~p~i~~V~P~Av~ag~~~~~~v~G~NL~~-----p~~rllc~~~ 436 (845)
.+++.-|+|+.|.|-.+.+|.+++++|-|.+|.. ++.++..+..
T Consensus 270 ~~~~~~~~~~av~P~~l~aG~~~~~~i~G~gL~g~~~l~~gv~v~~~s~ 318 (489)
T 1pby_A 270 VKADAAPQVLAVAPARLKIGEETQLRVAGTGLGSDLTLPEGVAGSVESA 318 (489)
T ss_dssp EETTCSSEEEEEESCEEETTCCEEEEEEEESCCSCEECCTTEEEEEEEC
T ss_pred eecCCCceEEEeChhhhcCCCceEEEEEecccccccccCCceEEEEecC
Confidence 4455678999999999999999999999999975 5667763333
Done!