Query 003139
Match_columns 845
No_of_seqs 605 out of 3586
Neff 8.5
Searched_HMMs 46136
Date Thu Mar 28 17:45:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003139.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003139hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 3.3E-57 7.1E-62 497.4 29.1 292 488-780 61-355 (361)
2 PF12819 Malectin_like: Carboh 100.0 2.4E-56 5.3E-61 488.4 30.4 322 38-388 1-347 (347)
3 PLN03150 hypothetical protein; 100.0 5.9E-53 1.3E-57 496.7 33.2 329 29-390 19-364 (623)
4 KOG0192 Tyrosine kinase specif 100.0 9.8E-47 2.1E-51 411.3 24.9 254 507-780 46-306 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-45 2.8E-50 400.2 17.3 253 506-779 210-463 (468)
6 KOG0581 Mitogen-activated prot 100.0 6.9E-45 1.5E-49 377.4 18.0 251 506-775 83-337 (364)
7 KOG1026 Nerve growth factor re 100.0 8.5E-45 1.8E-49 411.7 19.5 257 505-780 489-765 (774)
8 KOG0196 Tyrosine kinase, EPH ( 100.0 2.3E-44 4.9E-49 398.9 20.1 263 504-786 631-900 (996)
9 KOG0595 Serine/threonine-prote 100.0 7.2E-44 1.6E-48 372.3 19.5 203 501-711 9-220 (429)
10 KOG0575 Polo-like serine/threo 100.0 2.1E-43 4.5E-48 386.1 19.1 251 502-776 18-272 (592)
11 KOG0615 Serine/threonine prote 100.0 7.1E-43 1.5E-47 363.9 13.9 252 502-775 172-439 (475)
12 KOG0591 NIMA (never in mitosis 100.0 2.3E-43 5E-48 350.2 8.8 256 503-776 20-284 (375)
13 KOG0598 Ribosomal protein S6 k 100.0 3.2E-42 6.9E-47 357.5 17.2 242 501-765 24-269 (357)
14 KOG1094 Discoidin domain recep 100.0 2.5E-40 5.5E-45 356.0 31.3 264 502-777 538-804 (807)
15 KOG0193 Serine/threonine prote 100.0 2.8E-41 6.1E-46 367.0 17.9 262 499-779 389-655 (678)
16 KOG1095 Protein tyrosine kinas 100.0 7.7E-41 1.7E-45 392.7 21.6 261 503-782 693-966 (1025)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-40 3.5E-45 367.4 22.3 261 501-779 6-336 (338)
18 KOG4721 Serine/threonine prote 100.0 1.6E-41 3.5E-46 363.4 12.9 248 492-777 121-368 (904)
19 KOG0593 Predicted protein kina 100.0 1.9E-41 4.1E-46 339.8 11.2 265 502-773 2-284 (396)
20 KOG0198 MEKK and related serin 100.0 8.2E-41 1.8E-45 353.9 15.1 258 503-778 18-281 (313)
21 KOG0194 Protein tyrosine kinas 100.0 1.3E-40 2.7E-45 367.4 16.2 257 505-782 160-425 (474)
22 KOG0661 MAPK related serine/th 100.0 5.9E-41 1.3E-45 355.3 12.2 262 502-775 10-293 (538)
23 PHA02988 hypothetical protein; 100.0 2.6E-39 5.6E-44 348.5 23.1 248 507-779 25-281 (283)
24 KOG0592 3-phosphoinositide-dep 100.0 4.9E-40 1.1E-44 353.5 16.4 254 499-774 70-339 (604)
25 KOG0600 Cdc2-related protein k 100.0 4.3E-40 9.3E-45 351.2 15.6 262 502-773 117-400 (560)
26 cd05104 PTKc_Kit Catalytic dom 100.0 3.2E-39 6.9E-44 361.8 21.1 258 502-777 35-374 (375)
27 KOG0616 cAMP-dependent protein 100.0 2.1E-39 4.5E-44 324.9 16.7 236 502-764 44-283 (355)
28 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-39 5.8E-44 343.8 18.1 250 506-774 3-259 (259)
29 cd05096 PTKc_DDR1 Catalytic do 100.0 1E-38 2.3E-43 347.5 22.9 262 502-775 5-303 (304)
30 KOG0597 Serine-threonine prote 100.0 5.4E-40 1.2E-44 352.3 12.5 247 502-773 2-251 (808)
31 KOG0578 p21-activated serine/t 100.0 1.3E-39 2.8E-44 353.7 15.5 250 502-773 273-523 (550)
32 PLN00113 leucine-rich repeat r 100.0 3.4E-38 7.3E-43 396.1 30.6 268 492-779 683-953 (968)
33 cd05106 PTKc_CSF-1R Catalytic 100.0 5.9E-39 1.3E-43 359.4 20.8 259 502-778 38-373 (374)
34 KOG0582 Ste20-like serine/thre 100.0 1E-38 2.2E-43 335.9 20.5 262 502-773 26-293 (516)
35 KOG3653 Transforming growth fa 100.0 2.4E-38 5.3E-43 335.2 23.3 270 506-782 214-508 (534)
36 cd05631 STKc_GRK4 Catalytic do 100.0 1E-38 2.3E-43 344.2 20.9 251 504-773 2-261 (285)
37 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.3E-38 5E-43 337.9 23.0 255 502-777 5-265 (266)
38 KOG0583 Serine/threonine prote 100.0 1.5E-38 3.3E-43 350.3 20.9 252 500-775 15-277 (370)
39 cd05048 PTKc_Ror Catalytic Dom 100.0 3.3E-38 7.1E-43 339.6 22.4 255 503-776 6-282 (283)
40 KOG0659 Cdk activating kinase 100.0 1E-38 2.3E-43 315.5 16.6 262 503-775 3-283 (318)
41 cd05052 PTKc_Abl Catalytic dom 100.0 7.2E-38 1.6E-42 333.4 23.0 254 503-777 7-262 (263)
42 cd05108 PTKc_EGFR Catalytic do 100.0 8.1E-38 1.7E-42 342.5 24.0 259 502-781 7-272 (316)
43 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.5E-38 1.2E-42 353.3 23.1 260 501-778 36-398 (400)
44 cd05072 PTKc_Lyn Catalytic dom 100.0 5.7E-38 1.2E-42 333.5 21.5 254 502-776 6-260 (261)
45 KOG4278 Protein tyrosine kinas 100.0 4.4E-39 9.6E-44 346.9 12.5 257 502-779 267-525 (1157)
46 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-37 3E-42 336.4 23.3 259 502-779 5-284 (291)
47 cd05054 PTKc_VEGFR Catalytic d 100.0 7.4E-38 1.6E-42 345.7 21.6 260 502-779 7-335 (337)
48 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.8E-38 1.5E-42 332.8 20.5 255 501-776 5-260 (261)
49 cd06649 PKc_MEK2 Catalytic dom 100.0 9.7E-38 2.1E-42 344.1 22.4 264 502-776 5-304 (331)
50 cd05068 PTKc_Frk_like Catalyti 100.0 1.2E-37 2.6E-42 331.1 22.1 255 501-776 5-260 (261)
51 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.3E-37 2.9E-42 329.9 21.9 251 502-774 4-255 (256)
52 KOG0605 NDR and related serine 100.0 3.9E-38 8.5E-43 339.4 17.8 253 500-772 139-444 (550)
53 cd05033 PTKc_EphR Catalytic do 100.0 2.1E-37 4.6E-42 330.2 23.5 256 502-777 4-265 (266)
54 cd05571 STKc_PKB Catalytic dom 100.0 3.7E-38 8E-43 346.2 17.8 242 508-773 1-251 (323)
55 KOG0588 Serine/threonine prote 100.0 1.5E-38 3.3E-43 348.3 14.6 248 503-775 13-265 (786)
56 cd05093 PTKc_TrkB Catalytic do 100.0 2E-37 4.3E-42 334.8 23.0 259 502-779 5-281 (288)
57 cd05612 STKc_PRKX_like Catalyt 100.0 3.8E-38 8.3E-43 340.9 17.4 247 502-775 1-256 (291)
58 PTZ00267 NIMA-related protein 100.0 1.5E-37 3.3E-42 358.8 23.4 252 503-773 68-323 (478)
59 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-37 2.3E-42 334.9 20.7 255 502-775 5-279 (280)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.3E-38 1.1E-42 346.6 18.7 254 502-774 1-258 (333)
61 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-37 3.7E-42 333.1 22.1 257 500-775 4-276 (277)
62 KOG0585 Ca2+/calmodulin-depend 100.0 8.3E-38 1.8E-42 330.7 18.7 260 500-779 95-378 (576)
63 KOG0580 Serine/threonine prote 100.0 9.7E-39 2.1E-43 311.5 10.5 250 502-775 22-275 (281)
64 PTZ00263 protein kinase A cata 100.0 4.7E-38 1E-42 346.3 17.2 245 502-773 18-271 (329)
65 cd05055 PTKc_PDGFR Catalytic d 100.0 3.1E-37 6.8E-42 335.6 23.3 258 502-777 35-301 (302)
66 cd07848 STKc_CDKL5 Catalytic d 100.0 9.3E-38 2E-42 336.9 19.0 266 502-773 1-284 (287)
67 cd05090 PTKc_Ror1 Catalytic do 100.0 3.1E-37 6.6E-42 332.2 22.7 254 503-775 6-281 (283)
68 KOG4257 Focal adhesion tyrosin 100.0 6.2E-38 1.3E-42 339.1 17.2 257 504-782 391-654 (974)
69 cd05053 PTKc_FGFR Catalytic do 100.0 1.8E-37 3.9E-42 335.7 20.9 259 501-778 11-292 (293)
70 cd05045 PTKc_RET Catalytic dom 100.0 5E-37 1.1E-41 331.9 24.2 258 503-779 1-288 (290)
71 cd05111 PTK_HER3 Pseudokinase 100.0 4.5E-37 9.8E-42 330.4 23.2 257 502-779 7-270 (279)
72 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.9E-37 6.3E-42 327.5 21.1 251 503-775 5-256 (256)
73 KOG0694 Serine/threonine prote 100.0 1.8E-37 3.8E-42 343.1 20.0 240 501-767 367-613 (694)
74 cd05585 STKc_YPK1_like Catalyt 100.0 8.4E-38 1.8E-42 341.7 17.1 240 510-773 1-247 (312)
75 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.8E-37 8.2E-42 330.5 21.7 256 501-775 5-276 (277)
76 KOG1989 ARK protein kinase fam 100.0 4.3E-37 9.2E-42 351.0 23.2 261 501-781 36-315 (738)
77 cd07862 STKc_CDK6 Catalytic do 100.0 1.6E-37 3.5E-42 335.5 18.8 261 502-772 1-286 (290)
78 cd05595 STKc_PKB_beta Catalyti 100.0 1.2E-37 2.7E-42 342.0 18.1 242 508-773 1-251 (323)
79 cd05075 PTKc_Axl Catalytic dom 100.0 8.9E-37 1.9E-41 326.3 24.2 254 505-777 2-271 (272)
80 cd05084 PTKc_Fes Catalytic dom 100.0 5.5E-37 1.2E-41 324.2 22.3 247 509-775 2-251 (252)
81 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.3E-37 1.2E-41 326.0 22.1 253 502-776 6-259 (260)
82 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.6E-37 1.2E-41 334.4 22.7 261 502-781 18-303 (307)
83 cd05101 PTKc_FGFR2 Catalytic d 100.0 6.2E-37 1.3E-41 333.5 22.8 262 502-782 15-301 (304)
84 cd05593 STKc_PKB_gamma Catalyt 100.0 1.8E-37 4E-42 341.4 18.8 242 508-773 1-251 (328)
85 cd05043 PTK_Ryk Pseudokinase d 100.0 8E-37 1.7E-41 328.4 23.1 260 501-779 5-278 (280)
86 KOG0660 Mitogen-activated prot 100.0 2.1E-38 4.5E-43 327.8 10.2 272 497-774 17-311 (359)
87 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.6E-37 5.6E-42 333.9 19.2 262 502-773 5-285 (288)
88 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.1E-37 1.1E-41 330.6 21.5 265 502-777 4-283 (284)
89 KOG2345 Serine/threonine prote 100.0 4.1E-38 9E-43 308.3 11.7 264 501-778 20-301 (302)
90 cd05059 PTKc_Tec_like Catalyti 100.0 5.4E-37 1.2E-41 325.2 21.3 250 503-774 5-255 (256)
91 cd06650 PKc_MEK1 Catalytic dom 100.0 4.7E-37 1E-41 338.9 21.5 263 502-775 5-301 (333)
92 cd05107 PTKc_PDGFR_beta Cataly 100.0 6.3E-37 1.4E-41 344.5 23.0 259 502-778 37-400 (401)
93 cd05071 PTKc_Src Catalytic dom 100.0 9.1E-37 2E-41 324.8 23.0 254 502-777 6-260 (262)
94 PLN00034 mitogen-activated pro 100.0 4E-37 8.8E-42 342.3 21.1 247 504-774 76-329 (353)
95 KOG0201 Serine/threonine prote 100.0 2.3E-38 4.9E-43 333.5 10.3 248 503-773 14-263 (467)
96 cd05089 PTKc_Tie1 Catalytic do 100.0 8.9E-37 1.9E-41 331.2 23.1 258 502-781 2-279 (297)
97 cd05035 PTKc_Axl_like Catalyti 100.0 9.5E-37 2.1E-41 326.0 22.8 255 504-777 1-272 (273)
98 KOG2052 Activin A type IB rece 100.0 3.8E-37 8.2E-42 323.8 19.0 264 502-782 211-508 (513)
99 PTZ00426 cAMP-dependent protei 100.0 1.8E-37 3.8E-42 342.9 17.5 245 502-773 30-284 (340)
100 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.5E-37 7.5E-42 340.5 19.7 262 503-773 1-290 (338)
101 PTZ00283 serine/threonine prot 100.0 4.4E-37 9.6E-42 355.3 21.1 256 499-773 29-297 (496)
102 cd05091 PTKc_Ror2 Catalytic do 100.0 6.4E-37 1.4E-41 329.7 20.9 254 504-776 7-282 (283)
103 cd05628 STKc_NDR1 Catalytic do 100.0 1.7E-36 3.7E-41 338.6 24.7 203 502-709 1-240 (363)
104 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-36 3.3E-41 323.9 23.2 256 502-777 5-267 (268)
105 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.5E-37 2.1E-41 324.1 21.5 253 502-776 6-259 (260)
106 cd08228 STKc_Nek6 Catalytic do 100.0 1.7E-36 3.7E-41 323.2 23.5 258 502-777 2-265 (267)
107 cd05109 PTKc_HER2 Catalytic do 100.0 1.6E-36 3.5E-41 325.9 23.3 259 502-781 7-272 (279)
108 cd08529 STKc_FA2-like Catalyti 100.0 1.3E-36 2.8E-41 321.7 21.8 250 503-773 1-253 (256)
109 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-36 2.4E-41 327.5 21.5 255 502-775 5-279 (280)
110 cd05069 PTKc_Yes Catalytic dom 100.0 2.1E-36 4.6E-41 321.5 23.4 253 502-776 6-259 (260)
111 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-36 4.1E-41 320.9 22.8 249 502-776 6-255 (256)
112 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-36 2.4E-41 327.9 21.4 267 505-778 7-282 (283)
113 cd05061 PTKc_InsR Catalytic do 100.0 1.7E-36 3.6E-41 327.5 22.7 259 500-777 4-278 (288)
114 cd05088 PTKc_Tie2 Catalytic do 100.0 1.6E-36 3.4E-41 330.3 22.6 259 502-782 7-285 (303)
115 cd05097 PTKc_DDR_like Catalyti 100.0 9.8E-37 2.1E-41 330.5 20.9 262 502-775 5-294 (295)
116 cd05605 STKc_GRK4_like Catalyt 100.0 7.4E-37 1.6E-41 329.8 19.8 252 503-773 1-261 (285)
117 cd05573 STKc_ROCK_NDR_like Cat 100.0 2E-37 4.3E-42 344.4 15.8 252 502-774 1-286 (350)
118 cd05085 PTKc_Fer Catalytic dom 100.0 2.5E-36 5.5E-41 318.6 23.5 246 509-775 2-249 (250)
119 cd05584 STKc_p70S6K Catalytic 100.0 4.4E-37 9.5E-42 337.8 18.3 242 508-773 2-256 (323)
120 cd05626 STKc_LATS2 Catalytic d 100.0 1.1E-36 2.3E-41 342.4 21.9 254 503-774 2-306 (381)
121 KOG0589 Serine/threonine prote 100.0 9.8E-38 2.1E-42 338.1 12.9 251 502-773 4-258 (426)
122 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-36 2.3E-41 337.6 21.4 260 502-779 7-341 (343)
123 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-36 4.5E-41 321.0 22.6 246 509-776 2-254 (257)
124 cd05607 STKc_GRK7 Catalytic do 100.0 1.2E-36 2.6E-41 326.8 20.7 248 510-775 1-252 (277)
125 cd05603 STKc_SGK2 Catalytic do 100.0 7.3E-37 1.6E-41 335.7 19.1 237 508-768 1-242 (321)
126 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-36 2.4E-41 335.4 20.3 249 508-773 1-262 (329)
127 cd08229 STKc_Nek7 Catalytic do 100.0 2.1E-36 4.6E-41 322.5 21.9 258 502-777 2-265 (267)
128 cd05032 PTKc_InsR_like Catalyt 100.0 1.6E-36 3.6E-41 325.2 21.1 255 502-775 6-276 (277)
129 cd05082 PTKc_Csk Catalytic dom 100.0 2.4E-36 5.1E-41 320.2 21.9 248 502-776 6-255 (256)
130 cd05589 STKc_PKN Catalytic dom 100.0 1E-36 2.2E-41 335.1 19.7 245 504-773 1-257 (324)
131 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-37 1E-41 343.3 17.4 253 502-773 1-296 (364)
132 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.1E-36 6.7E-41 329.7 23.5 259 502-779 12-295 (314)
133 cd05065 PTKc_EphR_B Catalytic 100.0 2.6E-36 5.6E-41 322.4 22.3 255 503-777 5-268 (269)
134 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-36 2.6E-41 335.0 20.3 249 508-773 1-262 (329)
135 cd05034 PTKc_Src_like Catalyti 100.0 2.9E-36 6.3E-41 320.3 22.4 255 501-776 5-260 (261)
136 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.7E-36 1E-40 331.2 24.6 261 502-781 12-297 (334)
137 cd05601 STKc_CRIK Catalytic do 100.0 8.4E-37 1.8E-41 336.6 18.6 253 502-773 1-263 (330)
138 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.9E-36 8.5E-41 327.1 23.6 264 501-773 4-288 (303)
139 cd05115 PTKc_Zap-70 Catalytic 100.0 4.6E-36 1E-40 318.5 23.4 248 509-777 2-255 (257)
140 cd05047 PTKc_Tie Catalytic dom 100.0 4.1E-36 9E-41 321.2 23.1 248 509-778 2-269 (270)
141 cd05629 STKc_NDR_like_fungal C 100.0 1.4E-36 3.1E-41 341.0 20.5 254 502-774 1-306 (377)
142 cd05051 PTKc_DDR Catalytic dom 100.0 2.2E-36 4.7E-41 327.6 21.1 263 501-775 4-295 (296)
143 PHA03212 serine/threonine kina 100.0 2.8E-36 6.1E-41 339.1 22.8 261 501-774 91-377 (391)
144 cd05594 STKc_PKB_alpha Catalyt 100.0 4.9E-37 1.1E-41 337.7 16.2 243 508-773 1-252 (325)
145 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-36 2.9E-41 325.0 19.2 254 499-773 3-269 (272)
146 cd05614 STKc_MSK2_N N-terminal 100.0 1.7E-36 3.7E-41 334.4 20.5 252 503-773 1-267 (332)
147 cd05591 STKc_nPKC_epsilon Cata 100.0 8.1E-37 1.8E-41 335.3 17.7 242 508-773 1-254 (321)
148 cd05050 PTKc_Musk Catalytic do 100.0 3.3E-36 7.1E-41 325.1 22.1 256 501-775 4-287 (288)
149 cd05040 PTKc_Ack_like Catalyti 100.0 3E-36 6.4E-41 319.5 21.4 248 509-775 2-256 (257)
150 PRK13184 pknD serine/threonine 100.0 3.6E-36 7.8E-41 356.5 24.4 262 502-780 2-293 (932)
151 cd05608 STKc_GRK1 Catalytic do 100.0 2E-36 4.4E-41 325.5 20.4 246 510-773 1-257 (280)
152 cd06625 STKc_MEKK3_like Cataly 100.0 3.2E-36 7E-41 320.2 21.6 252 502-773 2-260 (263)
153 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.6E-36 1.4E-40 318.4 24.0 257 502-777 2-265 (267)
154 cd05590 STKc_nPKC_eta Catalyti 100.0 9.1E-37 2E-41 334.7 17.9 237 508-768 1-242 (320)
155 cd05587 STKc_cPKC Catalytic do 100.0 1.4E-36 3E-41 334.0 19.2 241 503-767 1-246 (324)
156 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-36 3.6E-41 333.2 19.5 237 508-768 1-242 (323)
157 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-36 3.4E-41 333.3 19.2 241 503-767 1-246 (323)
158 cd05596 STKc_ROCK Catalytic do 100.0 8.1E-37 1.7E-41 341.7 17.1 253 500-774 41-305 (370)
159 KOG0663 Protein kinase PITSLRE 100.0 5.3E-37 1.2E-41 311.8 13.9 266 502-774 76-362 (419)
160 cd00192 PTKc Catalytic domain 100.0 5.3E-36 1.1E-40 317.4 22.3 249 508-775 1-262 (262)
161 cd05073 PTKc_Hck Catalytic dom 100.0 6.8E-36 1.5E-40 317.6 23.0 253 502-776 6-259 (260)
162 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.7E-36 5.9E-41 332.0 20.4 244 508-768 1-249 (327)
163 cd06646 STKc_MAP4K5 Catalytic 100.0 3.1E-36 6.7E-41 321.4 20.2 254 502-774 9-266 (267)
164 KOG0611 Predicted serine/threo 100.0 3.3E-37 7.2E-42 318.7 12.2 247 502-774 53-304 (668)
165 cd05066 PTKc_EphR_A Catalytic 100.0 7.1E-36 1.5E-40 318.8 22.9 256 502-777 4-266 (267)
166 cd05592 STKc_nPKC_theta_delta 100.0 2E-36 4.2E-41 331.5 18.9 240 508-771 1-246 (316)
167 cd05630 STKc_GRK6 Catalytic do 100.0 3.2E-36 7E-41 324.8 20.3 253 504-775 2-263 (285)
168 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.9E-36 1.1E-40 320.4 21.4 252 509-775 2-268 (269)
169 cd06624 STKc_ASK Catalytic dom 100.0 6.9E-36 1.5E-40 318.9 22.5 257 497-773 3-265 (268)
170 cd08219 STKc_Nek3 Catalytic do 100.0 7.1E-36 1.5E-40 316.3 22.3 250 503-773 1-252 (255)
171 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-36 3.2E-41 341.5 18.1 252 503-773 2-305 (382)
172 KOG0658 Glycogen synthase kina 100.0 2.1E-37 4.6E-42 320.9 10.2 257 503-773 25-306 (364)
173 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-36 3.4E-41 339.1 18.1 256 497-774 38-305 (370)
174 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-36 3.3E-41 333.8 17.6 241 508-772 1-246 (325)
175 cd07853 STKc_NLK Catalytic dom 100.0 4.2E-36 9.1E-41 336.6 21.4 262 503-774 1-289 (372)
176 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-35 2.6E-40 319.1 24.0 257 502-779 7-270 (279)
177 cd05095 PTKc_DDR2 Catalytic do 100.0 7.2E-36 1.6E-40 323.9 22.4 262 502-775 5-295 (296)
178 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-36 4.7E-41 331.5 18.4 242 508-773 1-252 (318)
179 cd05041 PTKc_Fes_like Catalyti 100.0 1E-35 2.2E-40 314.2 22.9 247 509-775 2-250 (251)
180 KOG0199 ACK and related non-re 100.0 6.8E-37 1.5E-41 335.0 14.2 250 506-775 114-370 (1039)
181 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-35 2.3E-40 319.7 23.4 250 503-774 2-254 (279)
182 cd06654 STKc_PAK1 Catalytic do 100.0 6.7E-36 1.5E-40 324.2 21.9 250 502-773 20-270 (296)
183 cd05632 STKc_GRK5 Catalytic do 100.0 9.6E-36 2.1E-40 321.1 22.5 251 504-773 2-261 (285)
184 cd05598 STKc_LATS Catalytic do 100.0 1.5E-36 3.2E-41 340.8 16.6 253 502-773 1-301 (376)
185 cd05582 STKc_RSK_N N-terminal 100.0 9.8E-37 2.1E-41 334.3 14.7 238 508-769 2-245 (318)
186 cd05619 STKc_nPKC_theta Cataly 100.0 3.6E-36 7.7E-41 329.4 19.0 241 508-772 1-247 (316)
187 cd05060 PTKc_Syk_like Catalyti 100.0 1.3E-35 2.9E-40 314.7 22.9 248 508-777 1-255 (257)
188 cd05058 PTKc_Met_Ron Catalytic 100.0 1.5E-35 3.3E-40 314.9 23.2 251 508-778 1-260 (262)
189 cd05620 STKc_nPKC_delta Cataly 100.0 3.8E-36 8.3E-41 329.2 19.1 240 508-771 1-246 (316)
190 cd05615 STKc_cPKC_alpha Cataly 100.0 4.6E-36 1E-40 329.6 19.6 242 503-768 1-247 (323)
191 cd06615 PKc_MEK Catalytic doma 100.0 8.8E-36 1.9E-40 325.2 21.6 264 502-776 1-290 (308)
192 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-35 2.9E-40 322.9 22.8 260 502-782 7-273 (303)
193 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-35 3.4E-40 316.6 22.8 256 502-779 6-267 (270)
194 cd06643 STKc_SLK Catalytic dom 100.0 9.9E-36 2.1E-40 320.3 21.1 251 504-774 7-263 (282)
195 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.1E-36 1.5E-40 321.2 19.8 270 503-777 5-283 (284)
196 cd06612 STKc_MST1_2 Catalytic 100.0 1.3E-35 2.8E-40 314.0 21.4 250 502-773 3-253 (256)
197 cd07863 STKc_CDK4 Catalytic do 100.0 5.3E-36 1.1E-40 323.3 18.8 261 503-773 1-285 (288)
198 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.5E-36 1.9E-40 321.2 20.4 262 502-777 4-283 (284)
199 cd05112 PTKc_Itk Catalytic dom 100.0 1.5E-35 3.2E-40 313.9 21.8 251 502-774 4-255 (256)
200 cd05044 PTKc_c-ros Catalytic d 100.0 7.6E-36 1.6E-40 318.6 19.7 248 509-775 2-268 (269)
201 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.1E-35 2.4E-40 316.5 20.9 238 509-774 2-261 (262)
202 cd05042 PTKc_Aatyk Catalytic d 100.0 1.6E-35 3.5E-40 316.3 21.9 251 509-774 2-267 (269)
203 cd05046 PTK_CCK4 Pseudokinase 100.0 1.6E-35 3.6E-40 317.2 21.9 255 502-775 5-274 (275)
204 PTZ00036 glycogen synthase kin 100.0 5.6E-36 1.2E-40 341.9 19.4 261 501-775 65-353 (440)
205 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.2E-36 1.6E-40 326.0 19.1 267 502-775 6-288 (309)
206 cd08221 STKc_Nek9 Catalytic do 100.0 1.9E-35 4.2E-40 313.0 21.7 251 503-774 1-254 (256)
207 cd05602 STKc_SGK1 Catalytic do 100.0 3.8E-36 8.3E-41 330.6 16.9 241 508-772 1-246 (325)
208 KOG1025 Epidermal growth facto 100.0 1.3E-36 2.8E-41 338.1 13.0 254 505-779 699-959 (1177)
209 PHA03211 serine/threonine kina 100.0 2.3E-35 4.9E-40 336.0 23.5 262 501-773 168-455 (461)
210 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.5E-36 2E-40 319.3 19.2 238 509-774 2-273 (274)
211 cd06631 STKc_YSK4 Catalytic do 100.0 2.1E-35 4.5E-40 314.6 21.6 251 503-772 1-261 (265)
212 cd05627 STKc_NDR2 Catalytic do 100.0 3.7E-36 8.1E-41 335.5 16.5 253 502-773 1-293 (360)
213 PF00069 Pkinase: Protein kina 100.0 9.9E-36 2.2E-40 315.6 18.8 253 504-773 1-257 (260)
214 KOG0594 Protein kinase PCTAIRE 100.0 4.4E-36 9.5E-41 312.1 15.5 262 503-773 12-302 (323)
215 cd08223 STKc_Nek4 Catalytic do 100.0 3E-35 6.5E-40 311.6 22.3 250 503-773 1-254 (257)
216 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.3E-35 2.8E-40 319.8 19.8 259 502-777 5-270 (284)
217 cd05622 STKc_ROCK1 Catalytic d 100.0 7.1E-36 1.5E-40 334.1 18.4 260 494-775 35-306 (371)
218 KOG0599 Phosphorylase kinase g 100.0 2.1E-36 4.5E-41 298.9 12.3 256 498-776 13-286 (411)
219 KOG0610 Putative serine/threon 100.0 1.1E-35 2.3E-40 311.0 18.2 253 503-773 78-392 (459)
220 cd05083 PTKc_Chk Catalytic dom 100.0 1.7E-35 3.8E-40 313.2 20.1 247 502-776 6-253 (254)
221 cd06609 STKc_MST3_like Catalyt 100.0 2.2E-35 4.8E-40 316.1 21.0 247 503-773 2-251 (274)
222 PHA03207 serine/threonine kina 100.0 2.3E-35 5.1E-40 332.6 22.3 264 501-775 91-377 (392)
223 cd06656 STKc_PAK3 Catalytic do 100.0 2.4E-35 5.2E-40 320.0 21.5 251 501-773 18-269 (297)
224 cd06655 STKc_PAK2 Catalytic do 100.0 2E-35 4.4E-40 320.4 20.7 252 502-775 19-271 (296)
225 cd06651 STKc_MEKK3 Catalytic d 100.0 3.8E-35 8.2E-40 313.0 22.4 251 502-773 2-261 (266)
226 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.9E-35 4.1E-40 317.3 20.1 248 504-775 6-255 (277)
227 cd06644 STKc_STK10_LOK Catalyt 100.0 2.8E-35 6.1E-40 318.5 21.6 252 502-773 12-269 (292)
228 cd05624 STKc_MRCK_beta Catalyt 100.0 2.6E-35 5.5E-40 324.8 21.6 255 502-773 1-266 (331)
229 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.3E-35 7.2E-40 313.3 21.7 249 504-773 2-264 (267)
230 cd08528 STKc_Nek10 Catalytic d 100.0 3.3E-35 7.1E-40 313.8 21.5 253 503-775 1-268 (269)
231 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.5E-36 1.8E-40 316.5 16.6 239 509-775 2-258 (258)
232 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-35 3.7E-40 315.6 19.0 253 502-773 9-265 (267)
233 cd07876 STKc_JNK2 Catalytic do 100.0 4E-35 8.7E-40 327.1 22.7 264 501-775 20-317 (359)
234 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-35 4.2E-40 318.5 19.4 264 491-774 7-284 (286)
235 cd05597 STKc_DMPK_like Catalyt 100.0 2.3E-35 5E-40 325.2 20.4 255 502-773 1-266 (331)
236 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-35 7.3E-40 311.2 20.9 250 503-773 1-253 (256)
237 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.5E-35 5.4E-40 317.1 19.9 260 492-772 6-278 (282)
238 cd06632 STKc_MEKK1_plant Catal 100.0 4.5E-35 9.7E-40 310.2 21.6 248 503-773 1-255 (258)
239 cd06640 STKc_MST4 Catalytic do 100.0 7.1E-35 1.5E-39 312.9 23.3 249 503-775 5-255 (277)
240 PHA03209 serine/threonine kina 100.0 3.9E-35 8.5E-40 326.7 22.0 193 500-706 64-257 (357)
241 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.9E-35 1.1E-39 313.0 21.9 255 504-777 1-272 (273)
242 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.4E-35 5.2E-40 320.5 19.7 264 502-775 6-288 (301)
243 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.7E-35 1E-39 310.3 21.3 237 509-775 2-259 (259)
244 KOG4279 Serine/threonine prote 100.0 8.5E-36 1.9E-40 325.3 15.8 245 509-773 582-832 (1226)
245 cd08227 PK_STRAD_alpha Pseudok 100.0 5.1E-35 1.1E-39 321.9 22.2 259 507-775 3-309 (327)
246 smart00219 TyrKc Tyrosine kina 100.0 6.1E-35 1.3E-39 309.0 21.9 250 505-774 2-258 (258)
247 cd07874 STKc_JNK3 Catalytic do 100.0 2.8E-35 6E-40 327.9 20.3 264 500-774 15-312 (355)
248 cd06613 STKc_MAP4K3_like Catal 100.0 5.6E-35 1.2E-39 310.3 21.5 253 502-772 3-259 (262)
249 cd08220 STKc_Nek8 Catalytic do 100.0 4.9E-35 1.1E-39 309.6 21.0 249 503-773 1-253 (256)
250 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.7E-35 1.2E-39 312.5 21.6 255 503-773 2-269 (272)
251 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.9E-35 1.3E-39 312.0 21.7 252 509-775 2-267 (268)
252 cd07861 STKc_CDK1_euk Catalyti 100.0 4.1E-35 8.8E-40 315.7 20.5 263 503-773 1-282 (285)
253 cd05623 STKc_MRCK_alpha Cataly 100.0 2.3E-35 5E-40 325.4 19.0 255 502-773 1-266 (332)
254 cd06652 STKc_MEKK2 Catalytic d 100.0 9E-35 1.9E-39 309.8 22.7 251 502-773 2-261 (265)
255 cd06611 STKc_SLK_like Catalyti 100.0 2.8E-35 6E-40 316.4 18.9 252 502-773 5-262 (280)
256 cd07875 STKc_JNK1 Catalytic do 100.0 4.7E-35 1E-39 327.2 21.4 263 500-773 22-318 (364)
257 PTZ00284 protein kinase; Provi 100.0 3.6E-35 7.8E-40 338.7 20.6 268 496-775 123-440 (467)
258 cd06639 STKc_myosinIIIB Cataly 100.0 5.6E-35 1.2E-39 315.9 20.4 262 492-773 12-287 (291)
259 cd05574 STKc_phototropin_like 100.0 1.1E-34 2.4E-39 317.6 22.7 253 502-772 1-288 (316)
260 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.9E-35 1.5E-39 314.3 20.4 253 503-774 2-263 (286)
261 KOG0574 STE20-like serine/thre 100.0 6.5E-37 1.4E-41 305.7 4.1 248 504-773 35-283 (502)
262 cd07868 STKc_CDK8 Catalytic do 100.0 9.9E-35 2.2E-39 318.1 21.5 196 507-708 6-219 (317)
263 cd05609 STKc_MAST Catalytic do 100.0 9.7E-35 2.1E-39 316.5 21.3 256 502-776 1-273 (305)
264 cd08217 STKc_Nek2 Catalytic do 100.0 1.2E-34 2.7E-39 307.7 21.4 253 503-773 1-262 (265)
265 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.6E-34 3.5E-39 307.5 21.9 257 502-773 1-264 (267)
266 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-34 3.6E-39 311.0 21.9 262 502-773 1-283 (286)
267 PTZ00266 NIMA-related protein 100.0 9.9E-35 2.1E-39 345.4 21.9 254 501-773 12-295 (1021)
268 KOG0577 Serine/threonine prote 100.0 4.8E-36 1.1E-40 322.6 9.6 245 503-773 27-278 (948)
269 cd06608 STKc_myosinIII_like Ca 100.0 8.6E-35 1.9E-39 310.9 19.3 255 499-773 3-272 (275)
270 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-34 3.6E-39 307.9 20.8 254 503-773 1-264 (268)
271 cd07833 STKc_CDKL Catalytic do 100.0 1E-34 2.2E-39 313.0 19.0 263 502-773 1-285 (288)
272 cd06641 STKc_MST3 Catalytic do 100.0 4.4E-34 9.5E-39 306.7 23.7 247 503-773 5-253 (277)
273 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-34 5.6E-39 314.7 22.3 195 508-708 7-219 (317)
274 KOG0596 Dual specificity; seri 100.0 1.8E-35 3.9E-40 318.0 12.7 252 502-773 361-627 (677)
275 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.5E-35 1.2E-39 314.8 16.2 265 502-773 1-283 (286)
276 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.2E-34 4.8E-39 309.7 20.7 252 502-774 1-262 (283)
277 cd06658 STKc_PAK5 Catalytic do 100.0 9.6E-35 2.1E-39 314.5 17.9 245 507-773 27-272 (292)
278 cd05586 STKc_Sck1_like Catalyt 100.0 3.1E-35 6.7E-40 324.1 14.2 240 510-772 1-252 (330)
279 cd06647 STKc_PAK_I Catalytic d 100.0 2.3E-34 5E-39 311.7 20.7 251 502-774 19-270 (293)
280 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-34 2.4E-39 312.3 17.9 262 503-773 1-281 (284)
281 cd08225 STKc_Nek5 Catalytic do 100.0 1.7E-34 3.6E-39 305.7 19.0 250 503-773 1-254 (257)
282 cd07832 STKc_CCRK Catalytic do 100.0 2E-34 4.4E-39 310.3 19.9 262 503-773 1-282 (286)
283 cd06626 STKc_MEKK4 Catalytic d 100.0 3.5E-34 7.6E-39 304.6 21.5 252 503-772 1-260 (264)
284 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-33 2.2E-38 305.5 25.3 260 502-775 1-268 (287)
285 cd07844 STKc_PCTAIRE_like Cata 100.0 2E-34 4.4E-39 311.5 19.8 263 502-773 5-288 (291)
286 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-36 2.3E-41 296.9 1.7 251 502-773 11-267 (355)
287 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.1E-35 1.5E-39 323.0 16.5 262 497-774 10-299 (343)
288 cd06659 STKc_PAK6 Catalytic do 100.0 1.2E-34 2.5E-39 314.6 17.8 246 507-774 26-272 (297)
289 cd06606 STKc_MAPKKK Catalytic 100.0 5.2E-34 1.1E-38 301.3 22.3 252 503-773 1-257 (260)
290 cd06917 STKc_NAK1_like Catalyt 100.0 3.7E-34 8.1E-39 307.0 21.5 248 503-773 2-255 (277)
291 cd07841 STKc_CDK7 Catalytic do 100.0 4.2E-34 9.1E-39 310.1 21.8 261 503-773 1-282 (298)
292 cd06607 STKc_TAO Catalytic dom 100.0 3.7E-34 8E-39 312.2 21.5 248 502-775 15-269 (307)
293 cd06605 PKc_MAPKK Catalytic do 100.0 2.4E-34 5.3E-39 306.1 19.5 253 503-773 2-257 (265)
294 cd06648 STKc_PAK_II Catalytic 100.0 4.2E-34 9E-39 308.4 21.5 248 504-773 21-269 (285)
295 cd06623 PKc_MAPKK_plant_like C 100.0 6.7E-34 1.4E-38 302.3 22.3 253 502-773 1-256 (264)
296 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-34 5.7E-39 316.4 19.7 249 501-773 34-293 (382)
297 cd05122 PKc_STE Catalytic doma 100.0 8.2E-34 1.8E-38 298.6 22.6 249 504-773 2-251 (253)
298 cd06614 STKc_PAK Catalytic dom 100.0 3.5E-34 7.5E-39 308.9 20.0 256 499-775 16-272 (286)
299 KOG0667 Dual-specificity tyros 100.0 6.1E-35 1.3E-39 323.5 14.3 263 503-775 187-504 (586)
300 cd06635 STKc_TAO1 Catalytic do 100.0 7.8E-34 1.7E-38 311.1 23.1 250 504-779 27-283 (317)
301 cd05580 STKc_PKA Catalytic dom 100.0 4.1E-34 8.8E-39 309.2 20.5 245 502-773 1-254 (290)
302 KOG0986 G protein-coupled rece 100.0 6.7E-35 1.5E-39 306.6 13.9 246 501-768 184-436 (591)
303 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-34 4.1E-39 310.5 17.7 262 503-773 1-281 (284)
304 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8E-34 1.7E-38 306.9 22.2 266 500-772 3-287 (291)
305 KOG1024 Receptor-like protein 100.0 4.9E-34 1.1E-38 294.8 18.4 265 494-777 276-555 (563)
306 cd06616 PKc_MKK4 Catalytic dom 100.0 3.2E-34 6.8E-39 309.5 17.4 254 504-774 6-268 (288)
307 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-33 2.5E-38 309.2 22.0 267 503-773 1-313 (316)
308 cd07835 STKc_CDK1_like Catalyt 100.0 5E-34 1.1E-38 307.0 18.5 262 504-773 1-280 (283)
309 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.8E-33 3.9E-38 299.7 22.2 250 502-772 2-260 (264)
310 cd07843 STKc_CDC2L1 Catalytic 100.0 6.5E-34 1.4E-38 308.0 19.1 265 502-773 5-290 (293)
311 cd05578 STKc_Yank1 Catalytic d 100.0 3E-34 6.6E-39 304.4 16.2 247 503-771 1-253 (258)
312 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-33 2.3E-38 300.9 20.1 242 510-772 1-251 (262)
313 cd07837 STKc_CdkB_plant Cataly 100.0 8.8E-34 1.9E-38 307.1 19.6 263 502-773 1-291 (295)
314 KOG4717 Serine/threonine prote 100.0 4.3E-34 9.2E-39 303.3 16.5 246 503-772 19-269 (864)
315 cd07836 STKc_Pho85 Catalytic d 100.0 1.8E-33 4E-38 302.7 21.6 261 503-772 1-280 (284)
316 PHA03210 serine/threonine kina 100.0 9.2E-34 2E-38 328.6 20.6 271 500-776 146-457 (501)
317 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-33 2.8E-38 303.6 20.3 243 509-774 1-256 (279)
318 cd07840 STKc_CDK9_like Catalyt 100.0 9.5E-34 2.1E-38 305.0 19.2 261 504-773 1-284 (287)
319 cd08215 STKc_Nek Catalytic dom 100.0 2E-33 4.3E-38 297.0 20.9 250 503-773 1-255 (258)
320 KOG0579 Ste20-like serine/thre 100.0 4.6E-35 9.9E-40 316.5 8.4 245 509-773 39-289 (1187)
321 cd07831 STKc_MOK Catalytic dom 100.0 2.2E-33 4.9E-38 301.5 21.5 258 504-773 1-279 (282)
322 PLN00009 cyclin-dependent kina 100.0 1.4E-33 3.1E-38 305.5 19.7 262 502-773 2-284 (294)
323 cd05577 STKc_GRK Catalytic dom 100.0 1.5E-33 3.2E-38 302.6 19.7 244 510-772 1-253 (277)
324 cd05579 STKc_MAST_like Catalyt 100.0 9.9E-34 2.1E-38 300.8 17.8 244 510-775 1-256 (265)
325 KOG0200 Fibroblast/platelet-de 100.0 1.5E-33 3.3E-38 331.8 21.1 259 502-779 296-581 (609)
326 cd06627 STKc_Cdc7_like Catalyt 100.0 4E-33 8.6E-38 294.3 22.2 247 503-772 1-250 (254)
327 cd07865 STKc_CDK9 Catalytic do 100.0 1.4E-33 3.1E-38 307.5 19.3 267 502-773 12-307 (310)
328 cd07838 STKc_CDK4_6_like Catal 100.0 3.1E-33 6.7E-38 301.2 21.6 261 504-773 1-284 (287)
329 cd07849 STKc_ERK1_2_like Catal 100.0 8.6E-34 1.9E-38 313.4 17.7 263 501-773 4-292 (336)
330 cd08530 STKc_CNK2-like Catalyt 100.0 2.3E-33 5E-38 296.7 20.2 248 503-773 1-253 (256)
331 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-33 3.9E-38 305.7 19.6 264 500-773 5-299 (302)
332 cd07850 STKc_JNK Catalytic dom 100.0 3.7E-33 8.1E-38 310.5 22.6 263 500-773 14-311 (353)
333 PHA02882 putative serine/threo 100.0 3.5E-33 7.6E-38 302.6 21.7 258 502-774 12-293 (294)
334 cd07852 STKc_MAPK15 Catalytic 100.0 9.2E-34 2E-38 313.3 17.3 266 501-773 6-295 (337)
335 KOG0584 Serine/threonine prote 100.0 1.3E-34 2.8E-39 317.6 10.0 242 509-773 47-296 (632)
336 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-33 3.3E-38 302.9 18.1 260 504-773 1-280 (283)
337 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-33 4.8E-38 304.4 19.4 253 502-775 15-275 (296)
338 cd07845 STKc_CDK10 Catalytic d 100.0 2.1E-33 4.6E-38 306.5 19.1 265 501-775 6-292 (309)
339 cd06657 STKc_PAK4 Catalytic do 100.0 3.3E-33 7.2E-38 302.4 20.4 244 508-773 26-270 (292)
340 cd08226 PK_STRAD_beta Pseudoki 100.0 4.6E-33 1E-37 306.5 21.7 263 509-776 5-311 (328)
341 KOG4250 TANK binding protein k 100.0 8.1E-34 1.7E-38 314.9 15.5 267 507-779 18-312 (732)
342 PHA03390 pk1 serine/threonine- 100.0 8.4E-33 1.8E-37 295.3 22.7 249 495-772 7-261 (267)
343 cd06634 STKc_TAO2 Catalytic do 100.0 6.2E-33 1.3E-37 302.7 21.3 249 503-777 16-271 (308)
344 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-33 3.2E-38 311.6 16.4 262 501-773 4-291 (337)
345 cd08216 PK_STRAD Pseudokinase 100.0 4.4E-33 9.5E-38 304.6 19.7 261 509-775 9-297 (314)
346 cd05611 STKc_Rim15_like Cataly 100.0 4.9E-33 1.1E-37 295.4 19.1 242 508-773 2-248 (260)
347 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-33 3E-38 311.6 15.4 266 501-775 4-296 (334)
348 cd06633 STKc_TAO3 Catalytic do 100.0 1.3E-32 2.8E-37 300.9 22.7 244 504-773 23-273 (313)
349 KOG0690 Serine/threonine prote 100.0 5.5E-34 1.2E-38 287.7 10.8 240 502-765 168-411 (516)
350 cd07830 STKc_MAK_like Catalyti 100.0 4.3E-33 9.3E-38 299.7 18.6 263 504-773 1-280 (283)
351 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-32 2.5E-37 296.1 20.7 242 509-773 1-255 (278)
352 cd07879 STKc_p38delta_MAPK13 C 100.0 4.2E-33 9.1E-38 308.7 17.8 260 501-773 14-297 (342)
353 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.7E-33 1.2E-37 307.9 18.7 274 490-775 5-302 (345)
354 cd05581 STKc_PDK1 Catalytic do 100.0 4E-33 8.7E-38 299.0 16.9 249 502-772 1-276 (280)
355 cd05583 STKc_MSK_N N-terminal 100.0 2E-32 4.3E-37 295.6 21.2 255 503-776 1-266 (288)
356 cd07834 STKc_MAPK Catalytic do 100.0 4.9E-33 1.1E-37 306.5 16.6 263 503-774 1-290 (330)
357 cd05613 STKc_MSK1_N N-terminal 100.0 1.5E-32 3.2E-37 296.8 20.0 252 503-773 1-268 (290)
358 KOG0586 Serine/threonine prote 100.0 7.2E-33 1.6E-37 303.8 16.3 248 500-774 54-307 (596)
359 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.2E-32 4.8E-37 301.0 20.2 266 496-773 4-288 (328)
360 cd08222 STKc_Nek11 Catalytic d 100.0 1.5E-32 3.2E-37 291.7 17.8 249 503-773 1-257 (260)
361 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-32 3.2E-37 299.6 17.2 268 501-773 7-308 (311)
362 PTZ00024 cyclin-dependent prot 100.0 2.5E-32 5.4E-37 301.6 18.9 264 503-775 9-315 (335)
363 cd07857 STKc_MPK1 Catalytic do 100.0 3.3E-32 7.2E-37 300.2 19.6 264 503-773 1-292 (332)
364 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-32 5.1E-37 293.5 17.8 259 504-773 1-279 (282)
365 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.3E-32 7.2E-37 301.6 19.2 264 497-773 10-298 (343)
366 KOG0983 Mitogen-activated prot 100.0 4E-33 8.6E-38 276.1 10.1 245 506-773 96-349 (391)
367 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-32 2.9E-37 304.6 15.6 265 502-773 5-300 (342)
368 KOG4645 MAPKKK (MAP kinase kin 100.0 6.9E-34 1.5E-38 331.3 4.6 252 501-773 1234-1494(1509)
369 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-32 2.3E-37 320.2 13.9 253 501-772 478-870 (1351)
370 cd05123 STKc_AGC Catalytic dom 100.0 6.3E-32 1.4E-36 284.8 18.2 236 510-769 1-240 (250)
371 cd07851 STKc_p38 Catalytic dom 100.0 6.6E-32 1.4E-36 299.2 18.3 262 499-773 12-298 (343)
372 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-31 5.5E-36 317.7 22.0 145 502-651 4-152 (669)
373 KOG0607 MAP kinase-interacting 100.0 2.6E-32 5.6E-37 275.5 11.0 264 494-773 75-361 (463)
374 KOG0604 MAP kinase-activated p 100.0 2.5E-32 5.3E-37 273.9 10.5 251 501-775 60-324 (400)
375 KOG0612 Rho-associated, coiled 100.0 3.4E-32 7.4E-37 313.5 11.4 258 494-773 67-338 (1317)
376 cd05576 STKc_RPK118_like Catal 100.0 2.3E-31 5E-36 278.9 15.4 221 513-769 4-225 (237)
377 KOG0696 Serine/threonine prote 100.0 4.7E-32 1E-36 281.2 9.6 241 502-766 349-594 (683)
378 KOG0666 Cyclin C-dependent kin 100.0 1.1E-31 2.3E-36 270.4 11.1 204 500-707 22-242 (438)
379 smart00220 S_TKc Serine/Threon 100.0 1.3E-30 2.9E-35 272.1 19.5 237 514-772 1-240 (244)
380 KOG4236 Serine/threonine prote 100.0 8.9E-32 1.9E-36 286.3 9.9 245 507-773 569-819 (888)
381 KOG0587 Traf2- and Nck-interac 100.0 6.9E-31 1.5E-35 296.6 16.8 261 493-773 10-282 (953)
382 KOG0603 Ribosomal protein S6 k 100.0 7.3E-31 1.6E-35 289.5 14.9 243 501-776 321-566 (612)
383 KOG1006 Mitogen-activated prot 100.0 4.6E-32 1E-36 267.8 3.4 250 507-773 69-327 (361)
384 KOG0669 Cyclin T-dependent kin 100.0 2E-32 4.2E-37 268.1 0.7 269 502-775 17-317 (376)
385 KOG0671 LAMMER dual specificit 100.0 2.3E-31 5E-36 276.1 8.1 265 501-775 88-408 (415)
386 PLN03225 Serine/threonine-prot 100.0 4.6E-30 1E-34 299.5 20.1 260 500-773 130-450 (566)
387 PLN03224 probable serine/threo 100.0 5.9E-30 1.3E-34 291.2 20.3 259 501-773 144-500 (507)
388 KOG0662 Cyclin-dependent kinas 100.0 8.2E-31 1.8E-35 244.4 9.9 264 503-773 3-283 (292)
389 KOG0614 cGMP-dependent protein 100.0 9.7E-31 2.1E-35 278.1 8.2 250 504-776 422-680 (732)
390 KOG1151 Tousled-like protein k 100.0 1.2E-30 2.6E-35 272.6 7.6 255 503-771 464-739 (775)
391 KOG0695 Serine/threonine prote 100.0 3.2E-29 7E-34 253.9 16.4 247 502-765 250-502 (593)
392 KOG0608 Warts/lats-like serine 100.0 1.8E-29 3.9E-34 274.0 14.0 214 501-719 628-886 (1034)
393 KOG1027 Serine/threonine prote 100.0 9.4E-30 2E-34 286.2 9.9 245 504-772 511-766 (903)
394 KOG0664 Nemo-like MAPK-related 100.0 5E-30 1.1E-34 253.5 4.2 264 505-775 56-345 (449)
395 KOG0984 Mitogen-activated prot 100.0 8.6E-29 1.9E-33 236.4 9.0 195 507-707 51-254 (282)
396 cd00180 PKc Catalytic domain o 100.0 3E-27 6.5E-32 240.4 20.7 210 510-773 1-214 (215)
397 smart00221 STYKc Protein kinas 99.9 2.6E-26 5.7E-31 237.2 19.4 199 504-707 1-202 (225)
398 KOG0665 Jun-N-terminal kinase 99.9 8.3E-28 1.8E-32 244.2 7.7 254 503-773 18-310 (369)
399 KOG1152 Signal transduction se 99.9 4.5E-27 9.7E-32 254.1 8.7 196 502-706 561-770 (772)
400 KOG0668 Casein kinase II, alph 99.9 9.7E-27 2.1E-31 225.3 9.7 260 501-775 37-324 (338)
401 KOG1290 Serine/threonine prote 99.9 1E-25 2.3E-30 239.8 18.2 132 501-636 77-221 (590)
402 KOG0576 Mitogen-activated prot 99.9 3.1E-27 6.7E-32 259.4 4.7 253 501-772 14-270 (829)
403 KOG1345 Serine/threonine kinas 99.9 4.4E-26 9.6E-31 226.1 10.7 250 501-771 23-282 (378)
404 KOG0670 U4/U6-associated splic 99.9 5.9E-26 1.3E-30 242.4 5.7 264 501-773 431-746 (752)
405 PLN00181 protein SPA1-RELATED; 99.9 1.2E-25 2.7E-30 275.3 8.1 197 554-773 28-265 (793)
406 KOG1167 Serine/threonine prote 99.9 6.1E-25 1.3E-29 231.7 9.9 266 497-773 31-381 (418)
407 smart00750 KIND kinase non-cat 99.9 3.6E-24 7.9E-29 213.4 13.9 168 583-778 1-170 (176)
408 KOG0195 Integrin-linked kinase 99.9 8.6E-25 1.9E-29 216.5 6.2 245 509-777 197-446 (448)
409 PRK09188 serine/threonine prot 99.9 1.3E-22 2.9E-27 221.8 15.9 165 501-680 17-195 (365)
410 KOG1164 Casein kinase (serine/ 99.9 1.6E-21 3.4E-26 213.8 20.6 263 503-781 19-301 (322)
411 COG0515 SPS1 Serine/threonine 99.9 4.9E-20 1.1E-24 200.1 24.2 261 504-773 2-275 (384)
412 KOG1163 Casein kinase (serine/ 99.8 6.6E-21 1.4E-25 186.5 13.2 258 501-777 14-284 (341)
413 KOG1165 Casein kinase (serine/ 99.8 1.7E-20 3.7E-25 191.6 16.8 261 503-779 29-301 (449)
414 KOG0590 Checkpoint kinase and 99.8 2.2E-21 4.7E-26 226.0 5.3 255 506-774 322-586 (601)
415 KOG1023 Natriuretic peptide re 99.8 3.3E-20 7.2E-25 206.2 12.0 218 552-779 1-226 (484)
416 cd05147 RIO1_euk RIO kinase fa 99.8 9.8E-20 2.1E-24 183.3 11.6 137 508-652 3-166 (190)
417 PRK10359 lipopolysaccharide co 99.8 6.5E-20 1.4E-24 186.8 10.2 170 501-699 30-216 (232)
418 KOG1240 Protein kinase contain 99.8 1.9E-20 4.2E-25 216.2 6.2 249 503-775 24-293 (1431)
419 PRK12274 serine/threonine prot 99.8 2.6E-18 5.7E-23 171.2 16.3 186 505-707 5-209 (218)
420 cd05145 RIO1_like RIO kinase f 99.8 2E-18 4.3E-23 174.4 14.2 141 507-654 2-168 (190)
421 PF14531 Kinase-like: Kinase-l 99.8 4.4E-18 9.6E-23 178.5 15.2 231 504-764 14-288 (288)
422 KOG0603 Ribosomal protein S6 k 99.7 6.6E-19 1.4E-23 195.3 4.5 224 510-767 2-232 (612)
423 KOG1166 Mitotic checkpoint ser 99.7 1.2E-17 2.7E-22 197.8 14.4 199 497-703 693-901 (974)
424 PRK10345 hypothetical protein; 99.7 2.4E-17 5.2E-22 167.6 13.1 135 505-650 5-156 (210)
425 PRK14879 serine/threonine prot 99.7 1.1E-16 2.5E-21 164.4 12.6 134 508-652 2-143 (211)
426 smart00090 RIO RIO-like kinase 99.7 2E-16 4.4E-21 164.7 13.7 140 503-652 29-197 (237)
427 cd05144 RIO2_C RIO kinase fami 99.7 2.5E-16 5.5E-21 160.2 13.3 143 495-652 8-174 (198)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 2.4E-16 5.1E-21 160.5 12.9 130 509-652 1-138 (199)
429 PRK09605 bifunctional UGMP fam 99.7 2.2E-16 4.8E-21 184.8 12.4 136 502-652 333-476 (535)
430 KOG4158 BRPK/PTEN-induced prot 99.7 4.2E-16 9E-21 162.9 12.1 197 556-774 274-511 (598)
431 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.6E-17 7.8E-22 178.4 3.1 172 571-767 329-506 (516)
432 KOG0606 Microtubule-associated 99.6 1.6E-16 3.5E-21 184.3 8.2 211 501-767 82-306 (1205)
433 cd05120 APH_ChoK_like Aminogly 99.6 1.1E-14 2.3E-19 140.3 14.6 134 507-652 3-138 (155)
434 cd05119 RIO RIO kinase family, 99.5 2.7E-14 6E-19 143.7 12.1 136 507-652 2-163 (187)
435 PRK01723 3-deoxy-D-manno-octul 99.5 6.5E-14 1.4E-18 146.2 13.1 135 507-652 36-191 (239)
436 KOG0590 Checkpoint kinase and 99.5 4E-15 8.6E-20 173.7 -0.2 256 503-773 21-286 (601)
437 TIGR01982 UbiB 2-polyprenylphe 99.4 5.9E-13 1.3E-17 151.0 12.9 143 503-653 119-307 (437)
438 PF11721 Malectin: Di-glucose 99.3 3.7E-12 8E-17 125.9 9.0 144 36-179 3-174 (174)
439 PLN03150 hypothetical protein; 99.3 1E-11 2.3E-16 147.2 14.2 151 36-186 194-364 (623)
440 KOG1266 Protein kinase [Signal 99.3 6E-13 1.3E-17 136.6 2.8 204 550-773 119-331 (458)
441 cd05151 ChoK Choline Kinase (C 99.2 4.1E-11 8.8E-16 118.4 11.3 130 508-652 4-136 (170)
442 KOG0601 Cyclin-dependent kinas 99.2 1.1E-11 2.4E-16 138.5 5.9 247 503-771 115-377 (524)
443 KOG1243 Protein kinase [Genera 99.2 2.3E-10 5.1E-15 128.9 15.7 165 524-701 35-199 (690)
444 PRK04750 ubiB putative ubiquin 99.2 6.1E-11 1.3E-15 136.0 10.8 146 501-654 119-315 (537)
445 cd05154 ACAD10_11_like Acyl-Co 99.1 5.4E-10 1.2E-14 115.4 14.7 142 508-652 4-206 (223)
446 COG3642 Mn2+-dependent serine/ 99.1 5E-10 1.1E-14 108.0 11.5 130 509-652 3-140 (204)
447 PF11721 Malectin: Di-glucose 99.1 4.1E-11 8.9E-16 118.4 4.2 142 213-368 2-151 (174)
448 KOG3087 Serine/threonine prote 99.1 9.6E-10 2.1E-14 105.3 12.7 143 506-652 11-165 (229)
449 cd05146 RIO3_euk RIO kinase fa 99.1 1.6E-09 3.4E-14 108.5 13.4 133 509-652 4-173 (197)
450 KOG0601 Cyclin-dependent kinas 99.0 2.6E-10 5.6E-15 127.7 4.6 249 499-777 262-518 (524)
451 KOG3741 Poly(A) ribonuclease s 98.9 1.2E-08 2.6E-13 111.7 15.1 167 515-703 289-474 (655)
452 PRK15123 lipopolysaccharide co 98.9 2.9E-08 6.4E-13 104.9 13.8 140 509-652 29-194 (268)
453 KOG0606 Microtubule-associated 98.8 6.2E-10 1.4E-14 130.4 0.5 247 502-768 804-1084(1205)
454 PF01163 RIO1: RIO1 family; I 98.7 6.6E-08 1.4E-12 96.5 10.8 124 517-652 1-155 (188)
455 PF12819 Malectin_like: Carboh 98.7 6.6E-08 1.4E-12 106.6 11.4 147 35-184 180-347 (347)
456 COG4248 Uncharacterized protei 98.6 1E-06 2.3E-11 94.4 17.3 256 507-778 16-301 (637)
457 COG0478 RIO-like serine/threon 98.6 3.8E-07 8.3E-12 93.4 12.2 133 506-652 95-251 (304)
458 KOG2137 Protein kinase [Signal 98.5 2.9E-08 6.2E-13 112.8 2.1 151 606-771 105-263 (700)
459 PRK09902 hypothetical protein; 98.5 1.1E-06 2.5E-11 88.1 12.8 138 510-652 26-179 (216)
460 COG0661 AarF Predicted unusual 98.4 1.4E-06 3.1E-11 99.7 12.2 145 502-654 126-316 (517)
461 PF06293 Kdo: Lipopolysacchari 98.4 1.2E-06 2.7E-11 89.4 10.6 105 543-652 56-170 (206)
462 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 8.2E-06 1.8E-10 84.5 13.9 133 508-652 7-182 (226)
463 PF06176 WaaY: Lipopolysacchar 98.3 6.2E-06 1.3E-10 83.1 12.0 137 501-652 30-183 (229)
464 PF12260 PIP49_C: Protein-kina 98.2 5.2E-05 1.1E-09 76.0 15.7 103 546-652 7-111 (188)
465 PF01636 APH: Phosphotransfera 98.1 2.6E-05 5.6E-10 80.9 12.8 143 507-652 2-197 (239)
466 COG1718 RIO1 Serine/threonine 98.0 0.00015 3.3E-09 74.0 15.3 151 492-652 35-215 (268)
467 cd05150 APH Aminoglycoside 3'- 98.0 6.5E-05 1.4E-09 78.9 13.1 139 510-652 6-193 (244)
468 KOG1235 Predicted unusual prot 98.0 5.1E-05 1.1E-09 86.8 11.9 145 503-654 163-356 (538)
469 PLN02876 acyl-CoA dehydrogenas 97.9 0.00014 3.1E-09 89.8 16.2 148 507-654 43-259 (822)
470 KOG0576 Mitogen-activated prot 97.8 2E-06 4.4E-11 96.8 -1.8 182 507-705 247-430 (829)
471 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00035 7.5E-09 73.0 12.4 139 508-652 3-194 (235)
472 PRK10593 hypothetical protein; 97.7 0.00083 1.8E-08 72.7 15.7 79 504-585 16-100 (297)
473 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00051 1.1E-08 69.2 12.9 129 506-646 5-165 (199)
474 cd05157 ETNK_euk Ethanolamine 97.6 0.00069 1.5E-08 70.6 13.2 140 508-652 4-201 (235)
475 KOG1035 eIF-2alpha kinase GCN2 97.6 0.00021 4.5E-09 86.2 9.2 199 543-775 227-436 (1351)
476 TIGR02721 ycfN_thiK thiamine k 97.5 0.00057 1.2E-08 72.4 11.5 137 510-652 4-175 (256)
477 COG2112 Predicted Ser/Thr prot 97.5 0.00048 1E-08 66.6 9.5 128 506-652 26-155 (201)
478 PF13095 FTA2: Kinetochore Sim 97.5 0.0011 2.4E-08 66.3 11.4 125 502-650 37-206 (207)
479 cd05153 HomoserineK_II Homoser 97.4 0.0017 3.7E-08 70.3 13.6 142 507-652 19-205 (296)
480 PRK09550 mtnK methylthioribose 97.4 0.0053 1.2E-07 68.6 16.9 75 508-584 32-117 (401)
481 cd05156 ChoK_euk Choline Kinas 97.3 0.002 4.3E-08 70.0 11.7 140 508-652 4-213 (302)
482 PRK05231 homoserine kinase; Pr 97.2 0.0061 1.3E-07 66.8 15.2 141 508-652 28-217 (319)
483 TIGR00938 thrB_alt homoserine 96.9 0.012 2.7E-07 64.0 14.1 143 507-652 27-217 (307)
484 PLN02236 choline kinase 96.8 0.0097 2.1E-07 65.9 12.1 139 509-652 43-231 (344)
485 KOG2268 Serine/threonine prote 96.8 0.0023 5E-08 67.5 6.2 134 504-652 94-251 (465)
486 COG3173 Predicted aminoglycosi 96.7 0.029 6.2E-07 60.6 13.8 131 517-655 40-231 (321)
487 cd05152 MPH2' Macrolide 2'-Pho 96.6 0.031 6.8E-07 59.8 13.5 137 510-652 19-216 (276)
488 KOG1826 Ras GTPase activating 96.5 0.00041 8.9E-09 85.4 -1.4 162 542-705 1273-1440(2724)
489 PF03881 Fructosamin_kin: Fruc 96.3 0.026 5.6E-07 60.5 10.4 141 504-648 19-214 (288)
490 TIGR02904 spore_ysxE spore coa 96.0 0.088 1.9E-06 57.4 13.6 32 621-652 195-226 (309)
491 PLN02421 phosphotransferase, a 96.0 0.044 9.5E-07 60.3 10.9 139 509-652 21-213 (330)
492 PF01633 Choline_kinase: Choli 95.5 0.03 6.4E-07 57.3 6.9 31 622-652 143-174 (211)
493 TIGR01767 MTRK 5-methylthiorib 95.5 0.086 1.9E-06 57.9 10.4 73 509-582 2-84 (370)
494 COG5072 ALK1 Serine/threonine 95.5 0.048 1E-06 58.9 8.1 110 569-696 297-406 (488)
495 PLN02756 S-methyl-5-thioribose 95.4 0.21 4.5E-06 55.9 13.3 73 507-582 37-119 (418)
496 KOG1093 Predicted protein kina 95.3 0.01 2.2E-07 66.4 2.5 47 544-591 28-75 (725)
497 PRK06148 hypothetical protein; 95.2 0.21 4.5E-06 63.3 13.9 141 508-652 31-236 (1013)
498 COG2334 Putative homoserine ki 95.1 0.41 8.9E-06 52.4 14.4 139 510-652 34-228 (331)
499 PRK11768 serine/threonine prot 95.0 0.65 1.4E-05 51.0 15.9 137 513-652 36-224 (325)
500 TIGR02906 spore_CotS spore coa 95.0 0.38 8.3E-06 52.3 13.9 31 621-652 186-216 (313)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-57 Score=497.35 Aligned_cols=292 Identities=52% Similarity=0.847 Sum_probs=261.0
Q ss_pred cCccccHHHHHHHhcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEE
Q 003139 488 LGRLFMFQEILDATNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYC 567 (845)
Q Consensus 488 ~~~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~ 567 (845)
..+.|++.||..||++|...++||+|+||.||+|.+++|+.||||++.....+..++|.+|++++.+++|||||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46789999999999999999999999999999999999999999988776543146699999999999999999999999
Q ss_pred ecCC-cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEe
Q 003139 568 DERS-EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVAD 646 (845)
Q Consensus 568 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 646 (845)
.+.+ +.+||||||++|+|.++|+.....+|+|.+|++||.++|+||+|||+.+.++||||||||+|||||+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9999 599999999999999999876543899999999999999999999999888999999999999999999999999
Q ss_pred ccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 647 FGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 647 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
||+|+..+.. .....+...||.+|+|||++..+..+.|+|||||||+|+||+||+++.+...+.....+++|++...++
T Consensus 221 FGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 221 FGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred ccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 9999875431 222221118999999999999999999999999999999999999999877666677799999999999
Q ss_pred CchhhhhccccC-CCCCH-HHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhh
Q 003139 727 GMLDQIMDSNLV-GKVNP-ASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQL 780 (845)
Q Consensus 727 ~~~~~~~d~~l~-~~~~~-~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~ 780 (845)
+.+.+++|+.+. +.... .+..++.+++.+|++.+|.+||+|.+|+++|+.+...
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 999999999997 55554 6888999999999999999999999999999665443
No 2
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=2.4e-56 Score=488.41 Aligned_cols=322 Identities=34% Similarity=0.581 Sum_probs=252.8
Q ss_pred EecCCCccc----c-cCCceeecCCCCcccccccCCccccc--CCCCCCCcccceeEeec--ccceEEEeecc--cceEE
Q 003139 38 IACGSSQKV----T-FQARTYVPDTEHSSLSMKSGNSTTAS--SNSSAPSPIYQSARIFS--AAAFYKFEIEH--KGRHW 106 (845)
Q Consensus 38 i~CG~~~~~----~-~~~~~~v~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~t~R~F~--~~~cY~~~~~~--~g~~~ 106 (845)
||||++.+. | .+||+|++|.+|.+. |..+.++.. ...+...++|+|||+|+ +++||+||+.+ ++|||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~--g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yl 78 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDT--GKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYL 78 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccC--CCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEE
Confidence 899977443 3 379999999999876 776666322 33567788999999995 88999999984 45999
Q ss_pred EEEEeecCCCCCcC----CccceEEEEeCcEEEeecccccccCCCcceEEEEEeec-CCceEEEEeeCCCCc-ceeeeeE
Q 003139 107 VRLYFYTLPGSNQH----LNSASFTVATDKFVLLSNFTFKNYNSSFMFKEYAINVN-SDALTLTFIPSNNSV-AFVNAIE 180 (845)
Q Consensus 107 vR~~f~~~~~~~~~----~~~~~f~v~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~vc~~~~~~~~-pfi~~iE 180 (845)
||+||+|++|++.+ .+++.|++..+.....+. ...+....++++||++.+. ++.++|||+|+++|+ |||||||
T Consensus 79 iRl~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV-~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIsaiE 157 (347)
T PF12819_consen 79 IRLHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTV-NLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFISAIE 157 (347)
T ss_pred EEEEeccccccccccccccCCcceEEEECCceeEEE-EecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCceeEEE
Confidence 99999999999764 246779887765443221 1112223579999999999 799999999999877 9999999
Q ss_pred EEecCCCcccccccccCCCCccCCccccceeEEEEeecCCCc--cCCCCCcCCccccCC---CCceeeCCCCceeeccCc
Q 003139 181 VVSVPDAIFPDQALALEPSASFSGLSDLGFETVYRLNMGGPL--ITAQNDTLGRTWEND---ETYLHVNSSAVNVSVRPS 255 (845)
Q Consensus 181 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~r~n~g~~~--i~~~~D~~~R~W~~~---~~~~~~~~~~~~~~~~~~ 255 (845)
||+||+++|++.. ...+.+|++++|+||||.. ||||+|+|||+|.+. ..|....+. .
T Consensus 158 l~~lp~~ly~~~~----------~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~--------~ 219 (347)
T PF12819_consen 158 LRPLPDSLYPDTD----------ANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTT--------S 219 (347)
T ss_pred EEECCccceeccc----------cCCCceeEEEEeecCCCcccccCCCCCcceeeccccccCccccccccc--------e
Confidence 9999999996431 2467899999999999998 999999999999964 234332221 2
Q ss_pred eeeeeccCCcccChHHHHHHhhhccCCCCccceeeEEEEeecCCCCceEEEEEccCcccc--ccceEEEEEEecccccCC
Q 003139 256 AIRYTASVTAETAPNWVYATAEMMGDANVPEVNFNITWVLPVEPNFTYFVRVHLCDIASL--SMNNLVFNLYINDDIAQP 333 (845)
Q Consensus 256 ~~~~~~~~~~~~~P~~Vy~ta~~~~~~~~~~~~~~ltw~~~~~~~~~y~vrlhf~ei~s~--~~~~r~F~i~in~~~~~~ 333 (845)
.+......+.+.||..||+||+++++.+. .++++|.+ ++++..|+||||||||+.. ..++|+|+|+|||+.+..
T Consensus 220 ~i~~~~~~~~~~~P~~V~~TA~~~~~~s~---~~nltw~~-~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~ 295 (347)
T PF12819_consen 220 NININSSNNPYDAPSAVYQTARTPSNSSD---PLNLTWSF-VDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYS 295 (347)
T ss_pred eeecccCCccCcChHHHHHhhhccccccc---ceEEEecc-CCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccC
Confidence 23322345678999999999999988762 48899999 9999999999999999873 445799999999998875
Q ss_pred Ccchhh-hcCCccceeeeeeeeeecCCCCeeEEEecCCcccccchhccccceeeec
Q 003139 334 SVDLST-LTNGLNVPYYKDFVCNASADSNTLTVSVGPDSVADFTNATMNGLEVMKI 388 (845)
Q Consensus 334 ~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~l~v~~~P~~~~~~~~a~lngle~~~i 388 (845)
++.. ..+....++|.|+.+..+. .+.+.|++.|...+.. +++|||+|+|+|
T Consensus 296 --~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~isL~~t~~S~l-ppiLNalEIy~v 347 (347)
T PF12819_consen 296 --DVSPPYLGADTVPYYSDYVVNVPD-SGFLNISLGPTPDSTL-PPILNALEIYKV 347 (347)
T ss_pred --ccCcccccCcceEeecceEEEecC-CCEEEEEEEeCCCCCc-CceeEeeeeEeC
Confidence 5554 4566677889999887653 3478889999877644 999999999986
No 3
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=5.9e-53 Score=496.73 Aligned_cols=329 Identities=22% Similarity=0.300 Sum_probs=263.1
Q ss_pred ccCCCceEEEecCCCcccc--cCCceeecCCCCcccccccCCcccccCCCCCCCcccceeEeecc----cceEEEeeccc
Q 003139 29 AFTPVDNYLIACGSSQKVT--FQARTYVPDTEHSSLSMKSGNSTTASSNSSAPSPIYQSARIFSA----AAFYKFEIEHK 102 (845)
Q Consensus 29 ~~~~~~~~~i~CG~~~~~~--~~~~~~v~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~R~F~~----~~cY~~~~~~~ 102 (845)
+.+++++|+||||++++.+ .+||+|++|..|.. |.... .. ....+.+.|+|||+|+. ++||+||++++
T Consensus 19 ~~~~~~~~~I~CGs~~~~~~d~~~~~w~~D~~~~~---~~~~~--~~-~~~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~ 92 (623)
T PLN03150 19 ASPEPFTMRISCGARVNVRTAPTNTLWYKDFAYTG---GIPAN--AT-RPSFIAPPLKTLRYFPLSDGPENCYNINRVPK 92 (623)
T ss_pred ccCCCccEEEeCCCCCCcccCCCCCEEcCCccccc---Ccccc--cc-CcccccchhhccccCCcccccccceEeeecCC
Confidence 3448889999999887653 68999999966632 11111 11 12355678999999953 88999999999
Q ss_pred ceEEEEEEeecCCCCCcCCccceEEEEeCc---EEEeecccccccCCCcceEEEEEeecCCceEEEEeeCCCCcceeeee
Q 003139 103 GRHWVRLYFYTLPGSNQHLNSASFTVATDK---FVLLSNFTFKNYNSSFMFKEYAINVNSDALTLTFIPSNNSVAFVNAI 179 (845)
Q Consensus 103 g~~~vR~~f~~~~~~~~~~~~~~f~v~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~vc~~~~~~~~pfi~~i 179 (845)
|+||||+||+|++|++.+ +++.|+|.+++ +.++.+|+.. +..+++||++.++++.++|||+|+++++||||+|
T Consensus 93 g~ylVRl~F~~~~y~~~~-~~~~Fdv~~~~~~~~tv~~~~~~~---~~~v~~E~i~~~~~~~l~vcf~~~~~~~pFIs~i 168 (623)
T PLN03150 93 GHYSVRVFFGLVAEPNFD-SEPLFDVSVEGTQISSLKSGWSSH---DEQVFAEALVFLTDGSASICFHSTGHGDPAILSI 168 (623)
T ss_pred CcEEEEEEeecCCcCCCC-CCCceEEEECcEEEEEEecCcccC---CCcEEEEEEEEecCCcEEEEEecCCCCCCceeEE
Confidence 999999999999999998 78899999999 6677777532 4568999999999999999999999999999999
Q ss_pred EEEecCCCcccccccccCCCCccCCccccceeEEEEeecCCC----ccCCCCCcC--CccccCCCCceeeCCCCceeecc
Q 003139 180 EVVSVPDAIFPDQALALEPSASFSGLSDLGFETVYRLNMGGP----LITAQNDTL--GRTWENDETYLHVNSSAVNVSVR 253 (845)
Q Consensus 180 E~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~r~n~g~~----~i~~~~D~~--~R~W~~~~~~~~~~~~~~~~~~~ 253 (845)
|||+||+++|... +. .....+|+++||+||||+ .++||+|++ ||+|.+|.+|... ...+++.
T Consensus 169 Ev~~l~~~~y~~~-----~~----~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~--~~~~~st- 236 (623)
T PLN03150 169 EILQVDDKAYNFG-----PS----WGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSG--SDQAIST- 236 (623)
T ss_pred EEEEcCccccccc-----cc----ccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCC--ccccccc-
Confidence 9999999999422 10 112567999999999986 478999998 9999999887622 1222322
Q ss_pred CceeeeeccCCcccChHHHHHHhhhccCCCCccceeeEEEEeecCCCCceEEEEEccCccc--cccceEEEEEEeccccc
Q 003139 254 PSAIRYTASVTAETAPNWVYATAEMMGDANVPEVNFNITWVLPVEPNFTYFVRVHLCDIAS--LSMNNLVFNLYINDDIA 331 (845)
Q Consensus 254 ~~~~~~~~~~~~~~~P~~Vy~ta~~~~~~~~~~~~~~ltw~~~~~~~~~y~vrlhf~ei~s--~~~~~r~F~i~in~~~~ 331 (845)
...|.+. +.+.+.+|+.||+||+.+.+.. .+++|.++++++..|+||||||||+. ...++|+|+|++||+.+
T Consensus 237 ~~~I~~~-~~~~~~~P~~VyqTA~~~~~~~-----~~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~ 310 (623)
T PLN03150 237 ENVIKKA-SNAPNFYPESLYQSALVSTDTQ-----PDLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTA 310 (623)
T ss_pred ccccccc-cCCCccChHHHhhhhccccCCC-----CceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEe
Confidence 3445544 3467789999999999887632 36899999999999999999999974 35578999999999999
Q ss_pred CCCcchhhhcCCccceeeeeeeeeecCCCCeeEEEecCCcccccchhccccceeeeccC
Q 003139 332 QPSVDLSTLTNGLNVPYYKDFVCNASADSNTLTVSVGPDSVADFTNATMNGLEVMKISN 390 (845)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~v~~~P~~~~~~~~a~lngle~~~i~~ 390 (845)
..++++...+++...++++++.+... .+.+.|+++|... .++++|++|+|++..
T Consensus 311 ~~~~di~~~~g~~~~~~~~~~~v~~~--~g~l~isl~p~~~---s~pilNaiEI~~~~~ 364 (623)
T PLN03150 311 FKDVDIVKMSGERYTALVLNKTVAVS--GRTLTIVLQPKKG---THAIINAIEVFEIIT 364 (623)
T ss_pred ecccChhhhcCCcccceEEEeEEeec--CCeEEEEEeeCCC---Ccceeeeeeeeeccc
Confidence 88999988887777788888876654 3679999999753 358999999999974
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-47 Score=411.31 Aligned_cols=254 Identities=35% Similarity=0.558 Sum_probs=214.4
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-cEEEEEEeccCC
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-EMILVYEYMANG 583 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~g 583 (845)
.+.||+|+||+||+|.+++...||||++.... ....++|.+|+.+|.+++|||||+++|+|.+.. .+++|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 34599999999999999844449999987653 223679999999999999999999999999887 799999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eeeccCCCCcEEECCCC-ceEEEeccccCCCCCCCCccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQS-IIHRDVKTTNILLDDNF-VAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDik~~NILl~~~~-~~kl~DFGla~~~~~~~~~~~ 661 (845)
+|.++|+......+++..+++|+.|||+||+|||+ .+ ||||||||+||||+.++ ++||+|||+++...... ..
T Consensus 126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~ 200 (362)
T KOG0192|consen 126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TS 200 (362)
T ss_pred cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--cc
Confidence 99999987555789999999999999999999999 66 99999999999999997 99999999998743211 33
Q ss_pred ccccccCCCcCChhhhc--cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 662 STAVKGSFGYLDPEYFR--RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~--~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.+...||+.|||||+++ ..+|+.|+|||||||+||||+||+.||..... .+ . ...+.......
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~--~------------~~~v~~~~~Rp 265 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ--V------------ASAVVVGGLRP 265 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH--H------------HHHHHhcCCCC
Confidence 44578999999999999 67999999999999999999999999976554 21 1 11222223334
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhh
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQL 780 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~ 780 (845)
.++..++..+..++.+||+.||.+||++.+++..|+.+...
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~ 306 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSH 306 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHh
Confidence 44555788899999999999999999999999999988663
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-45 Score=400.16 Aligned_cols=253 Identities=31% Similarity=0.445 Sum_probs=214.6
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
..+.||+|.||.||.|.++....||+|.+..... ..++|.+|+++|++|+|+|||+|+|+|..++.++||||||+.|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 3557999999999999999777999998876532 347899999999999999999999999998899999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.++|.......+...+.+.++.|||+||+||++ +++|||||.++||||+++..+||+||||||...+ +........
T Consensus 289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~~~ 364 (468)
T KOG0197|consen 289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTASEGG 364 (468)
T ss_pred HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCC-CceeecCCC
Confidence 999987667789999999999999999999999 9999999999999999999999999999995332 334344555
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPA 744 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 744 (845)
.-.+.|.|||.+..+.++.|||||||||+||||+| |+.|+...... +.+ +.++...+-..|..
T Consensus 365 kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~------ev~----------~~le~GyRlp~P~~ 428 (468)
T KOG0197|consen 365 KFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE------EVL----------ELLERGYRLPRPEG 428 (468)
T ss_pred CCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH------HHH----------HHHhccCcCCCCCC
Confidence 66789999999999999999999999999999998 55555433222 111 22233333345677
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 745 SLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 745 ~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
++..+.+++..||+.+|++|||++.+...|+....
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 89999999999999999999999999999887654
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-45 Score=377.36 Aligned_cols=251 Identities=27% Similarity=0.372 Sum_probs=209.8
Q ss_pred cceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-cEEEEEEeccC
Q 003139 506 ESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-EMILVYEYMAN 582 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~ 582 (845)
..+.||+|..|+|||++++ +++.+|+|.+... .....+++.+|++++++.+||+||.++|.|.... +..|+||||.+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 3557999999999999987 6788999988543 4556688999999999999999999999999988 59999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|||+..+... +.+++..+-+|+.+|++||.|||+ .++||||||||+||||+..|++||||||.++..... ..
T Consensus 163 GSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a 234 (364)
T KOG0581|consen 163 GSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IA 234 (364)
T ss_pred CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hc
Confidence 9999998543 579999999999999999999996 389999999999999999999999999999874332 55
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||..|||||.+.+..|+.++||||||+.++|+.+|+-|+....+. .....+ .+..+++... ...+
T Consensus 235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~-~~~~~~---------Ll~~Iv~~pp-P~lP 303 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP-YLDIFE---------LLCAIVDEPP-PRLP 303 (364)
T ss_pred ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC-CCCHHH---------HHHHHhcCCC-CCCC
Confidence 6789999999999999999999999999999999999999998764211 111111 2233333211 1223
Q ss_pred H-HHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 743 P-ASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 743 ~-~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
. .+..++..++..||++||.+||++.+++++-.
T Consensus 304 ~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 304 EGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred cccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 3 37788999999999999999999999987743
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.5e-45 Score=411.66 Aligned_cols=257 Identities=32% Similarity=0.476 Sum_probs=217.4
Q ss_pred CcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
...+.||+|+||+||+|+.. +.+.||||.++..... ..++|++|+++|+.++|||||+|+|+|.+++.+++|+
T Consensus 489 ~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvF 568 (774)
T KOG1026|consen 489 VFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVF 568 (774)
T ss_pred eehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEE
Confidence 34457999999999999854 3457999998877554 7889999999999999999999999999999999999
Q ss_pred EeccCCCccccccCC--------C----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEE
Q 003139 578 EYMANGPLRSHLYGT--------D----LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVA 645 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~--------~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 645 (845)
|||..|+|.++|... . ..+|+-.+.+.||.|||.||+||-+ +.+|||||..+|+||.++..+||+
T Consensus 569 EYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 569 EYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEEec
Confidence 999999999999632 1 2348999999999999999999998 999999999999999999999999
Q ss_pred eccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHh
Q 003139 646 DFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQ 724 (845)
Q Consensus 646 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~ 724 (845)
||||+|.....+.........-.++|||||.+..++||.+||||||||+|||+++ |+.|+......+ +.+++
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E-------VIe~i 718 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE-------VIECI 718 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH-------HHHHH
Confidence 9999997655444443334445789999999999999999999999999999997 888887654433 22333
Q ss_pred hcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhh
Q 003139 725 KKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQL 780 (845)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~ 780 (845)
+++ ++ -..+..++.++.+|+..||+.+|.+||+++||-..|+...+.
T Consensus 719 ~~g--------~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 719 RAG--------QL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred HcC--------Cc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 333 33 346778999999999999999999999999999999877553
No 8
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=398.89 Aligned_cols=263 Identities=24% Similarity=0.384 Sum_probs=223.6
Q ss_pred CCcceeeeeeceEEEEEEEEcC----CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLDD----GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
..+.++||.|.||+|++|+++- ...||||.++.. .+++..+|+.|..||.++.||||++|.|+.......+||.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 3466789999999999999862 356999998876 46677899999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
||+||+|+.+|+.++ +++++.++..++++||.||+||-+ .++|||||.++|||++.+..+|++||||+|...+...
T Consensus 711 yMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 999999999999877 569999999999999999999998 9999999999999999999999999999997654322
Q ss_pred cc-cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 659 TH-VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 659 ~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.. ....-+-.++|.|||.+..+++|.+||||||||+|||.++ |.+|+.....++- .+.++..
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV----------------IkaIe~g 850 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV----------------IKAIEQG 850 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH----------------HHHHHhc
Confidence 22 2223444679999999999999999999999999999875 8888866544331 1222333
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhccccc
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSA 786 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~~~~~ 786 (845)
.+-..+.+++..|.+|++.||++|-.+||.+.+|+..|+++...+.....
T Consensus 851 yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~ 900 (996)
T KOG0196|consen 851 YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKT 900 (996)
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcc
Confidence 44456789999999999999999999999999999999998876665443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-44 Score=372.31 Aligned_cols=203 Identities=31% Similarity=0.496 Sum_probs=183.0
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
..+|...+.||+|+|+.||+|+++ ++..||||.+... ..+..+.+..|+++|+.++|||||.|++++..++.++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356777788999999999999986 6889999998766 5667778899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC------CceEEEeccccC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN------FVAKVADFGLSK 651 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~------~~~kl~DFGla~ 651 (845)
|||.+|+|.++++.. +.+++.....++.|+|.||++||+ ++||||||||+||||+.. -.+||+|||+||
T Consensus 89 EyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999655 479999999999999999999999 999999999999999864 468999999999
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR 711 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~ 711 (845)
... ........+|++-|||||+++.++|+.|+|+||.|+|||||++|+.||+.....
T Consensus 164 ~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 164 FLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred hCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 854 445556789999999999999999999999999999999999999999765443
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-43 Score=386.09 Aligned_cols=251 Identities=26% Similarity=0.429 Sum_probs=214.1
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
..|...++||+|||+.+|+++. ..|+.||+|.+... .....+...+||++.++|+|||||++++++++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688889999999999999997 78999999987653 3455678899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
|+|++++|..++. ...++++.+++.+++||+.||.|||+ ++|+|||||..|+||+++.++||+|||||.....
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~-- 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY-- 170 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeecC--
Confidence 9999999999985 55689999999999999999999999 9999999999999999999999999999987543
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
........+||+.|.|||++.+...+..+||||+|||||-||+|++||+...-.+ .+..+.....
T Consensus 171 ~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke---------------ty~~Ik~~~Y 235 (592)
T KOG0575|consen 171 DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE---------------TYNKIKLNEY 235 (592)
T ss_pred cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH---------------HHHHHHhcCc
Confidence 2234567899999999999999999999999999999999999999997542221 1111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+|........+|+.++|+.+|.+|||+++|+.+--.
T Consensus 236 --~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 236 --SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred --ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 1334555677899999999999999999999876443
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.1e-43 Score=363.90 Aligned_cols=252 Identities=26% Similarity=0.374 Sum_probs=204.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChH-------hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQ-------GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
+.|...+.||+|+||.|-+|..+ +|+.||||+++...-. ......+|+++|++++|||||++.++++..+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 45677889999999999999854 7999999987654211 123357999999999999999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC---CceEEEecccc
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN---FVAKVADFGLS 650 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~---~~~kl~DFGla 650 (845)
|||||||+||.|.+.+-.++ .+.+..-..+++|++.|+.|||+ +||+||||||+||||..+ ..+||+|||+|
T Consensus 252 YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred EEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEecccchh
Confidence 99999999999999986554 46666778899999999999999 999999999999999765 88999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCC---CchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQL---TEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
+... ........+||+.|.|||++.++.. ..|+|+||+|||||-+|+|.+||....... .+.
T Consensus 327 K~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~--sl~---------- 391 (475)
T KOG0615|consen 327 KVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP--SLK---------- 391 (475)
T ss_pred hccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--cHH----------
Confidence 9843 4455667899999999999986543 348899999999999999999997654322 111
Q ss_pred chhhhhccccCC--CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 MLDQIMDSNLVG--KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 ~~~~~~d~~l~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+++...+... ....+..++..+++.+||..||++||++.|++++-+
T Consensus 392 --eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 392 --EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred --HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 1222222211 122456788899999999999999999999987754
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-43 Score=350.18 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=208.0
Q ss_pred CCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCC--CChHhHHHHHHHHHHHHhCCCCCcceEEEE-EecCCc-EEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNP--RSEQGIAEFRTEIEMLSKLRHRHLVSLIGY-CDERSE-MILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~-~~~~~~-~~lV~ 577 (845)
+|.+.+.||+|.||+|||+.. .+|..+|.|.+.- .+.+..++...|+.+|++|+|||||+++++ +.+..+ ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 356677899999999999984 5899999998763 356667889999999999999999999984 445555 89999
Q ss_pred EeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 578 EYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQ-SIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 578 Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
|||..|+|...+.. +....++++.+++++.|+++||.++|..... .|+||||||.||+|+.+|.+||+||||++...
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999998853 3445789999999999999999999984432 38999999999999999999999999999854
Q ss_pred CCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 655 ALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
. ........+|||.||+||.+.+.+|+.||||||+||++|||..-++||.+. ++.+.. +.++.+...
T Consensus 180 s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~-~KI~qgd~~---- 246 (375)
T KOG0591|consen 180 S--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLC-KKIEQGDYP---- 246 (375)
T ss_pred c--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHH-HHHHcCCCC----
Confidence 3 344456789999999999999999999999999999999999999999764 222211 112222111
Q ss_pred cccCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 735 SNLVGKVN-PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 735 ~~l~~~~~-~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.++ .-....+.+|+..|+..||++||+...+++.+..
T Consensus 247 -----~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 247 -----PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 122 3456789999999999999999997666666654
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-42 Score=357.54 Aligned_cols=242 Identities=26% Similarity=0.376 Sum_probs=202.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
.+.|+..++||+|+||+||.++.+ +++.+|+|.+++. .....+....|..+|.+++||.||+|+..+++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 357899999999999999999865 6888999987664 234567788999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
+||+.||.|..+|... +.+++..+.-++.+|+.||.|||+ ++||||||||+|||||++|+++|+||||++....
T Consensus 104 ld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 9999999999999544 578999999999999999999999 9999999999999999999999999999986432
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
........+||+.|||||++.+..|+..+|+||+|+++|||++|.+||......+ +. +.+...+
T Consensus 178 -~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~------~~---------~~I~~~k 241 (357)
T KOG0598|consen 178 -DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK------MY---------DKILKGK 241 (357)
T ss_pred -CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH------HH---------HHHhcCc
Confidence 2333456899999999999999999999999999999999999999997643221 21 1222211
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCC
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRP 765 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RP 765 (845)
+. ..+.-......+++.+.|+.+|++|.
T Consensus 242 ~~-~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 LP-LPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CC-CCCccCCHHHHHHHHHHhccCHHHhc
Confidence 11 12222456778999999999999996
No 14
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=356.03 Aligned_cols=264 Identities=28% Similarity=0.444 Sum_probs=217.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHh-HHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQG-IAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
....+.++||+|-||+|.++....+.+||||+++....+. ..+|.+|+++|.+++||||++|+|+|..++.+++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 4556677899999999999999988999999998876544 589999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++|+|.++|..+..+.+.-....+||.|||.||+||.+ .++|||||.++|||+|.++++||+|||++|....-+..+
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 99999999987755555667788899999999999998 999999999999999999999999999999765545555
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHH--cCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL--CTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ell--tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
.....+-.++|||||.+..+++|.+||||+||+.|||++ |..+|+.....++ .++-...+...+.....
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~---vven~~~~~~~~~~~~~------ 765 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ---VVENAGEFFRDQGRQVV------ 765 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH---HHHhhhhhcCCCCccee------
Confidence 555667789999999999999999999999999999986 5667775432221 22212222222111111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
...++.++..+.+++++||..+-++||+++++...|++.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 123566788899999999999999999999999888753
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-41 Score=367.04 Aligned_cols=262 Identities=27% Similarity=0.472 Sum_probs=214.7
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
.-.+.+.....||+|.||+||+|+|.+ .||||.++.. +.+..+.|++|+..+++-||.||+-++|||...+. .||
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred cCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 334556677789999999999999973 5899987654 56678999999999999999999999999988776 999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
..+|+|.+|+.+|+..+ ..++..+.+.|+.|||+|+.|||. ++|||||||+.||+|.+++.|||+||||+......
T Consensus 466 TqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW 541 (678)
T ss_pred ehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeee
Confidence 99999999999998665 578999999999999999999998 99999999999999999999999999999754333
Q ss_pred CCcccccccccCCCcCChhhhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRR---QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
..........|...|||||+++. .+|+..+||||||+|+|||+||..|+. ....+++. .+...|.+. .
T Consensus 542 ~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIi------fmVGrG~l~--p 612 (678)
T KOG0193|consen 542 SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQII------FMVGRGYLM--P 612 (678)
T ss_pred ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheE------EEecccccC--c
Confidence 33333345568889999999975 478999999999999999999999997 44433321 122222111 1
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
| + ......+++++.+|+..||..++++||.+.+|+..|+.++.
T Consensus 613 d--~-s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 613 D--L-SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred c--c-hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1 1 12335678889999999999999999999999998887765
No 16
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-41 Score=392.74 Aligned_cols=261 Identities=30% Similarity=0.447 Sum_probs=215.0
Q ss_pred CCCcceeeeeeceEEEEEEEEc--CCc----EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD--DGT----KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~--~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
+.+..+.||+|+||.||+|... +|. .||||.+... +.+...+|++|..+|++++|||||+++|+|.+....++
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 4455678999999999999865 233 4899988765 56778899999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 576 VYEYMANGPLRSHLYGTD-----LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
++|||++|+|..+|++.+ ...|+..+++.++.|||+|+.||++ +++|||||.++|+||+....+||+|||||
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999999998652 3468999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
|.....+.........-..+|||||.++.+.+|.|+|||||||+|||++| |..|+......+- .....+.+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v------~~~~~~gg-- 921 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV------LLDVLEGG-- 921 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH------HHHHHhCC--
Confidence 95443333322222344678999999999999999999999999999998 5666654433221 11112222
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 730 DQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
+| +.+..++.++.+++..||+.+|++||++.++++.++.+.+-..
T Consensus 922 ------RL--~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 922 ------RL--DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred ------cc--CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 22 3567889999999999999999999999999999888766433
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.6e-40 Score=367.37 Aligned_cols=261 Identities=25% Similarity=0.393 Sum_probs=205.9
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecC-C
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDER-S 571 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~-~ 571 (845)
.++|++.+.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|++++.++ +||||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 357888899999999999999742 34679999886543 34456789999999999 899999999998764 4
Q ss_pred cEEEEEEeccCCCccccccCCC----------------------------------------------------------
Q 003139 572 EMILVYEYMANGPLRSHLYGTD---------------------------------------------------------- 593 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------- 593 (845)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 6899999999999998885421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCc
Q 003139 594 --LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGY 671 (845)
Q Consensus 594 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y 671 (845)
..++++.+++.++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 1358899999999999999999998 89999999999999999999999999999864321111122234567889
Q ss_pred CChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHH
Q 003139 672 LDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFG 750 (845)
Q Consensus 672 ~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~ 750 (845)
+|||++.+..++.++|||||||+||||++ |+.||......+. .. .....+.. ...+......+.
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-----~~-~~~~~~~~---------~~~~~~~~~~l~ 307 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-----FC-QRLKDGTR---------MRAPENATPEIY 307 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-----HH-HHHhcCCC---------CCCCCCCCHHHH
Confidence 99999999999999999999999999997 9999865432211 11 11111110 112234456788
Q ss_pred HHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 751 ETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 751 ~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+++.+||+.+|.+||++.++++.|+.+++
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998764
No 18
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=363.43 Aligned_cols=248 Identities=31% Similarity=0.508 Sum_probs=208.3
Q ss_pred ccHHHHHHHhcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Q 003139 492 FMFQEILDATNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS 571 (845)
Q Consensus 492 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 571 (845)
..|++|.+ .+-||+|+.|.||+|+++ ++.||||+++... ..+|+-|++|+||||+.+.|+|....
T Consensus 121 iPFe~IsE-------LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP 185 (904)
T KOG4721|consen 121 IPFEEISE-------LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP 185 (904)
T ss_pred CCHHHhhh-------hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc
Confidence 44566543 446999999999999998 6889999876332 35888999999999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
.+|||||||+.|.|...|... .+++-.....+.++||.||.|||. +.|||||||+-||||..+..+||+|||.++
T Consensus 186 cyCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~ 260 (904)
T KOG4721|consen 186 CYCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSK 260 (904)
T ss_pred eeEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchH
Confidence 999999999999999999544 478888899999999999999999 999999999999999999999999999998
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
.... ......+.||..|||||++++.+.++|+|||||||||||||||..|+.......- -|.
T Consensus 261 e~~~---~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----IwG----------- 322 (904)
T KOG4721|consen 261 ELSD---KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----IWG----------- 322 (904)
T ss_pred hhhh---hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----EEe-----------
Confidence 7432 2344578999999999999999999999999999999999999999864332110 011
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
+=...|.-..+..+++.|.-|+++||+..|..||++++++.+|+-+
T Consensus 323 VGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 323 VGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 1112233345677889999999999999999999999999998755
No 19
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.9e-41 Score=339.84 Aligned_cols=265 Identities=24% Similarity=0.311 Sum_probs=206.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-H-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-Q-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..-++|+|+||.|||++++ +|+.||||++....+ . -.+-.++|+++|++++|+|+|.|+.+|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35666778999999999999987 699999999865433 3 33456899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
||+..-|.++-+. ...++.+.+.+++.|+++|+.|+|+ +++|||||||+||||+.++.+||||||+||.... .
T Consensus 82 ~~dhTvL~eLe~~--p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--p 154 (396)
T KOG0593|consen 82 YCDHTVLHELERY--PNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--P 154 (396)
T ss_pred ecchHHHHHHHhc--cCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC--C
Confidence 9987555544322 2357889999999999999999999 9999999999999999999999999999998654 3
Q ss_pred cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH--------HHhh-cCc
Q 003139 659 THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM--------TWQK-KGM 728 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~--------~~~~-~~~ 728 (845)
....+..+.|.+|+|||.+-+ .+|...+||||.||++.||++|.+.|.+....++..++.... ..+. ++.
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 344566788999999999887 799999999999999999999999998766555433222110 0011 111
Q ss_pred -----hhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 729 -----LDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 729 -----~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+.+.-++.-....-+....-+.+++..|++.||.+|++-++++.+
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111111123345578899999999999999999998754
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=353.89 Aligned_cols=258 Identities=27% Similarity=0.401 Sum_probs=207.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--cEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS--EMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~--~~~lV~Ey 579 (845)
++...+.||+|+||.||++... +|...|||.....+....+.+.+|+.+|.+++|||||+.+|.....+ .+++.|||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeec
Confidence 3455668999999999999976 48999999876654334677899999999999999999999854444 68999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEeccccCCCCC-CC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKTGPA-LD 657 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~~~~-~~ 657 (845)
+++|+|.+++..... .|++..+..+.+||++||+|||+ ++||||||||+||||+. ++.+||+|||+++.... ..
T Consensus 98 ~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 98 APGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred cCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 999999999976654 79999999999999999999998 99999999999999999 79999999999986442 11
Q ss_pred CcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.........||+.|||||++..+ ....++||||+||+++||+||++||... ....++......+ .
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~---------~ 239 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRE---------D 239 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhcc---------C
Confidence 12233467899999999999964 3345999999999999999999998653 1111121111111 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
....++........+++.+|++.+|++|||+.+++++.--..
T Consensus 240 ~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 240 SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 122455667778889999999999999999999998765433
No 21
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=367.41 Aligned_cols=257 Identities=30% Similarity=0.464 Sum_probs=211.2
Q ss_pred CcceeeeeeceEEEEEEEEcC--C--cE-EEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTLDD--G--TK-VAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~~--g--~~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
...++||+|+||+||+|++.. + .. ||||.... ......++|++|.++|++++|||||+++|++.....+++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 344689999999999999763 2 23 89998774 3577789999999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
||+|+||+|.++|.... ..++..++++++.++|+||+|||+ +++|||||.++|+|++.++.+||+||||++.....
T Consensus 240 mEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~ 315 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY 315 (474)
T ss_pred EEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCCcce
Confidence 99999999999997654 269999999999999999999999 99999999999999999999999999999875421
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
... .....-...|+|||.+....|+.++|||||||++||+++ |..|+.+....+ + ..++...
T Consensus 316 ~~~--~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~---v------------~~kI~~~ 378 (474)
T KOG0194|consen 316 VMK--KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE---V------------KAKIVKN 378 (474)
T ss_pred eec--cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH---H------------HHHHHhc
Confidence 111 112245679999999999999999999999999999998 777776543321 1 1112122
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
......+...+..+..+..+||..+|++||+|.++.+.|+.+.....
T Consensus 379 ~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 379 GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 22233445667788889999999999999999999999998866444
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-41 Score=355.28 Aligned_cols=262 Identities=24% Similarity=0.311 Sum_probs=208.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHH--HHHHHHHHhCC-CCCcceEEEEEecCC-cEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEF--RTEIEMLSKLR-HRHLVSLIGYCDERS-EMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~-H~niv~l~g~~~~~~-~~~lV 576 (845)
++|...+.||.|.||.||+|+.. .|..||||+++..-.. +++. ++|+..|++|. |||||+|.+++.+.+ .+++|
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 46777789999999999999854 7889999998765433 3333 57999999998 999999999998877 99999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
||||+ .+|.+++... ...+++..+..|+.||++||+|+|. +|+.|||+||+|||+..+..+||+||||||...
T Consensus 89 fE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~-- 161 (538)
T KOG0661|consen 89 FEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR-- 161 (538)
T ss_pred HHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc--
Confidence 99995 5899988766 5789999999999999999999999 999999999999999999999999999999743
Q ss_pred CCcccccccccCCCcCChhhh-ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC--------
Q 003139 657 DQTHVSTAVKGSFGYLDPEYF-RRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG-------- 727 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~-~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-------- 727 (845)
.....+..+.|.+|+|||++ +.+.|+.+.|+|++|||++|+.+-++.|.+..+.++..-+- ...+..
T Consensus 162 -SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc---~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 162 -SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKIC---EVLGTPDKDSWPEG 237 (538)
T ss_pred -cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHH---HHhCCCccccchhH
Confidence 33345667889999999976 56789999999999999999999999998766555432111 111100
Q ss_pred -chhhhhcccc-------CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 -MLDQIMDSNL-------VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 -~~~~~~d~~l-------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+...+.=.+ ....-+....+..+++.+|++.||.+|||+.+.+++--
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 0111111000 01112336778899999999999999999999987743
No 23
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=348.53 Aligned_cols=248 Identities=22% Similarity=0.331 Sum_probs=201.9
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh---HhHHHHHHHHHHHHhCCCCCcceEEEEEec----CCcEEEEEEe
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE---QGIAEFRTEIEMLSKLRHRHLVSLIGYCDE----RSEMILVYEY 579 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~----~~~~~lV~Ey 579 (845)
...||+|++|.||+|.++ |+.||||++..... ...+.|.+|+++|++++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 357999999999999984 88999998865432 225778899999999999999999999866 4578999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++|+|.+++... ..++|...++++.|++.||.|||+ ..+++||||||+|||+++++.+||+|||+++.....
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 9999999999654 478999999999999999999997 247889999999999999999999999999763321
Q ss_pred ccccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 660 HVSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||......+ +....... ..
T Consensus 177 --~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~------~~~~i~~~---------~~ 239 (283)
T PHA02988 177 --PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE------IYDLIINK---------NN 239 (283)
T ss_pred --cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhc---------CC
Confidence 123457889999999976 789999999999999999999999997543221 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
....+..++..+.+++.+||+.||++|||+.++++.|+...+
T Consensus 240 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 240 SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 112233456789999999999999999999999999987654
No 24
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=353.49 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=213.1
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
...++|...+.||+|+|++|++|+.. .+..+|||++.+. .++..+-...|-++|.+| .||.|++|+--+.+...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 34467888899999999999999854 6889999987653 222334456789999999 899999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
|+|+||+++|+|.++|+. .+.|++.....++.+|+.||+|||+ +|||||||||+|||||+|+++||+|||.|+..
T Consensus 150 YFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred EEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 999999999999999954 4689999999999999999999999 99999999999999999999999999999975
Q ss_pred CCCCCc---------ccc--cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH
Q 003139 654 PALDQT---------HVS--TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT 722 (845)
Q Consensus 654 ~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~ 722 (845)
...... ... ..++||..|.+||++..+..+..+|+|+||||||+|+.|.+||....+.-
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl---------- 294 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL---------- 294 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH----------
Confidence 543221 112 45899999999999999999999999999999999999999997654321
Q ss_pred HhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 723 WQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..++|++- .-++++..++...+|+.+.|..||.+|+|.++|.++.
T Consensus 295 -----iFqkI~~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 -----IFQKIQAL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -----HHHHHHHh--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 23344432 2346677778899999999999999999998887663
No 25
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-40 Score=351.22 Aligned_cols=262 Identities=26% Similarity=0.320 Sum_probs=205.8
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 576 (845)
..|+..++||+|.||.||||+. .+|+.||+|++.... +....-..+||.+|++|.||||++|.+...+. ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 3466677899999999999984 579999999876554 33344567899999999999999999998776 689999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
+|||++ +|..++... .-.++..++..++.|++.||+|+|. .+|+|||||.+|||||.+|.+||+|||||++...
T Consensus 197 FeYMdh-DL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~- 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP- 270 (560)
T ss_pred Eecccc-hhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeeccC-
Confidence 999975 777777543 3479999999999999999999999 9999999999999999999999999999997554
Q ss_pred CCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC--------
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG-------- 727 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-------- 727 (845)
......+..+-|.+|+|||.+.+ ..|+.++|+||.||||.||+.|++.|.+..+.++...+- ++....
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIf---klcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIF---KLCGSPTEDYWPVS 347 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHH---HHhCCCChhccccc
Confidence 33334667788999999999887 589999999999999999999999998877666543321 111110
Q ss_pred chh--hhhcc------ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 MLD--QIMDS------NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 ~~~--~~~d~------~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+. ..+.+ ++.+ .-...+....+|+..+|..||.+|.|+.++++.
T Consensus 348 kLP~~~~~kp~~~y~r~l~E-~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 348 KLPHATIFKPQQPYKRRLRE-TFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cCCcccccCCCCcccchHHH-HhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000 00000 0100 011234556789999999999999999998765
No 26
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.2e-39 Score=361.81 Aligned_cols=258 Identities=24% Similarity=0.381 Sum_probs=204.0
Q ss_pred cCCCcceeeeeeceEEEEEEEE------cCCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL------DDGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
++|+..+.||+|+||.||+|++ +.+..||||++.... ....+.+.+|++++..+ +||||++++++|.+.+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4677888999999999999974 235679999886542 34456788999999999 899999999999999999
Q ss_pred EEEEEeccCCCccccccCCC------------------------------------------------------------
Q 003139 574 ILVYEYMANGPLRSHLYGTD------------------------------------------------------------ 593 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 593 (845)
++||||+++|+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999988875321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 594 -------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 594 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
...++|..+++++.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 1257899999999999999999998 899999999999999999999999999997643322212
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......++..|+|||++.+..++.++|||||||++|||++ |..||....... .... ...++ ...
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~----~~~~~---------~~~ 336 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYK----MIKEG---------YRM 336 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHH----HHHhC---------ccC
Confidence 2223345678999999999999999999999999999998 788875432211 1111 11111 111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
..+...+..+.+++.+||+.+|++||++.+|++.|++.
T Consensus 337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 11222346788999999999999999999999999864
No 27
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=324.90 Aligned_cols=236 Identities=26% Similarity=0.371 Sum_probs=204.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
.+|+..+.||.|+||.|.+++.+ +|.-+|+|.++... .++.+...+|..+|+.+.||++++|.+-|.+.+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 35778889999999999999976 68889999887653 445667789999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||++||.|..+|+.. ++++.....-++.||+.||+|||+ .+|++|||||+|||||++|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 999999999999654 579999999999999999999999 9999999999999999999999999999987432
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.....+||+.|+|||.+..+.+..++|.|||||++|||+.|.+||....+.. ..++|+...+
T Consensus 197 ---rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~---------------iY~KI~~~~v 258 (355)
T KOG0616|consen 197 ---RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ---------------IYEKILEGKV 258 (355)
T ss_pred ---cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH---------------HHHHHHhCcc
Confidence 2457899999999999999999999999999999999999999998765421 2334444443
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCC
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDR 764 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~R 764 (845)
. ++.-....+.+|+...|+.|-.+|
T Consensus 259 ~--fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 259 K--FPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred c--CCcccCHHHHHHHHHHHhhhhHhh
Confidence 2 555566778889999999988888
No 28
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-39 Score=343.81 Aligned_cols=250 Identities=35% Similarity=0.537 Sum_probs=198.2
Q ss_pred cceeeeeeceEEEEEEEEc-----CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 506 ESLLLGVGGFGRVYKGTLD-----DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~-----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
..+.||.|.||.||+|.+. .+..|+||.+... .....++|.+|++.+++++||||++++|+|...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3568999999999999987 2567999998654 445578999999999999999999999999988889999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++|+|.++|.......+++.++++|+.|+++||.|||+ .+++|+||+++|||+++++.+||+|||+++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999987756789999999999999999999999 89999999999999999999999999999875322222
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
.......+...|+|||.+....++.++||||||+++|||++ |+.|+..... .++.... .++. .
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~------~~~~~~~-~~~~---------~ 223 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN------EEIIEKL-KQGQ---------R 223 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH------HHHHHHH-HTTE---------E
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc------ccccccc-cccc---------c
Confidence 23334556778999999999999999999999999999999 6777654321 1122221 1111 1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
...+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 224 ~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112334567788999999999999999999999876
No 29
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1e-38 Score=347.51 Aligned_cols=262 Identities=27% Similarity=0.408 Sum_probs=203.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC-----------------CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD-----------------GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSL 563 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~-----------------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l 563 (845)
++|...+.||+|+||.||++.+++ +..||+|.+... ......+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788899999999999997542 336999987764 34456789999999999999999999
Q ss_pred EEEEecCCcEEEEEEeccCCCccccccCCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceee
Q 003139 564 IGYCDERSEMILVYEYMANGPLRSHLYGTD-----------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIH 626 (845)
Q Consensus 564 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 626 (845)
++++.+.+..++||||+++|+|.+++.... ...++|.++++++.|++.||+|||+ .+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence 999999999999999999999998874321 1357899999999999999999999 89999
Q ss_pred ccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcC--CCC
Q 003139 627 RDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCT--RPA 704 (845)
Q Consensus 627 rDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg--~~p 704 (845)
|||||+|||+++++.+||+|||+++...............++..|+|||++..+.++.++||||||+++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999764332222222334567899999999999999999999999999999874 456
Q ss_pred CCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 705 LNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 705 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+...... ....++......... ......++.++..+.+++.+||+.+|++|||+.+|.+.|+
T Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE---QVIENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH---HHHHHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 6543221 122222221111100 0001122345678899999999999999999999998875
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.4e-40 Score=352.34 Aligned_cols=247 Identities=28% Similarity=0.434 Sum_probs=212.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|...+.||+|.||.||||+.+ +.+.||+|.+.+. .+++++.+.+|++++++++|||||.++++++...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46777788999999999999866 6788999977653 56678889999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+.+ +|..+|... +.++++.+..|+.++..||.|||+ .+|+|||+||+||||++++.+|++|||+||.... .
T Consensus 82 ~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~ 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--N 153 (808)
T ss_pred hhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc--C
Confidence 9976 999999654 479999999999999999999999 9999999999999999999999999999997543 5
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
....+.++||+-|||||...+++|+..+|.||+|||+|||++|++||.... +.+.+.....+ + .
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~d--------~-v- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILKD--------P-V- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhcC--------C-C-
Confidence 566778999999999999999999999999999999999999999996421 22222221111 1 1
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+......+..++...|.+||.+|.+-.+++.+
T Consensus 218 -~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 218 -KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 2345667889999999999999999999998765
No 31
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=353.67 Aligned_cols=250 Identities=26% Similarity=0.406 Sum_probs=210.3
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
..|.....||+|+.|.||.++- .+++.||||++........+-+.+|+.+|+..+|+|||+++..+..+++++.|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 4566677899999999999974 468899999998777666677889999999999999999999998889999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++|+|.+.+... .+++.++..||+++++||+|||. ++|+|||||.+|||++.++.+||+|||++....... .
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--~ 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--S 424 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeecccccc--C
Confidence 999999998544 48999999999999999999999 999999999999999999999999999997654322 2
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....+||+.|||||+.....|..|.||||||++++||+-|.+||-...+-... |.. ..+|. +.+ .
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl----yLI--a~ng~------P~l--k 490 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----YLI--ATNGT------PKL--K 490 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH----HHH--hhcCC------CCc--C
Confidence 345788999999999999999999999999999999999999999653332211 111 11111 111 2
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+......|.+++.+||+.|+++||++.|+|++
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 334566789999999999999999999999876
No 32
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3.4e-38 Score=396.12 Aligned_cols=268 Identities=29% Similarity=0.461 Sum_probs=222.5
Q ss_pred ccHHHHHHHhcCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Q 003139 492 FMFQEILDATNKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER 570 (845)
Q Consensus 492 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~ 570 (845)
+.++++. ..|...+.||+|+||.||+|+. .++..||||++...... ...|++.+++++|||||+++|+|.+.
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 4455544 4567788999999999999997 47899999988654322 23468899999999999999999999
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
+..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||+.+.++|+||||||+||+++.++.+++. ||..
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~ 829 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLP 829 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccc
Confidence 99999999999999999984 38999999999999999999997666899999999999999999988886 6665
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
..... .....+|..|||||++.+..++.|+|||||||++|||++|+.|++.... ....+.+|+..........
T Consensus 830 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 902 (968)
T PLN00113 830 GLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLD 902 (968)
T ss_pred ccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchh
Confidence 43211 1223678999999999999999999999999999999999999864332 3456788888777666677
Q ss_pred hhhccccCCC--CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 731 QIMDSNLVGK--VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 731 ~~~d~~l~~~--~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
.++|+.+... .+.....++.+++.+||+.+|++||+|+||++.|+.+.+
T Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 903 MWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred heeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 7778776543 345677788999999999999999999999999998755
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.9e-39 Score=359.38 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
++|+..+.||+|+||.||+|+.. ++..||+|++... .....+.+.+|+++++.+ +|+||++++++|.+.+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 46888889999999999998742 2357999998654 334456788999999999 899999999999999999
Q ss_pred EEEEEeccCCCccccccCCC------------------------------------------------------------
Q 003139 574 ILVYEYMANGPLRSHLYGTD------------------------------------------------------------ 593 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 593 (845)
++||||+++|+|.+++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999998874321
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 594 --------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 594 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
..++++.++++|+.||++||+|||+ ++|+||||||+|||+++++.+||+|||+++..............
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 1257889999999999999999998 99999999999999999999999999999764322111122233
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPA 744 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 744 (845)
.++..|||||++.+..++.++|||||||++|||++ |+.||........ . ..... .......+..
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~----~~~~~---------~~~~~~~~~~ 339 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--F----YKMVK---------RGYQMSRPDF 339 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--H----HHHHH---------cccCccCCCC
Confidence 45678999999999999999999999999999997 9999865432111 0 01111 1111111222
Q ss_pred HHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 745 SLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 745 ~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
.+..+.+++.+||+.+|.+||++.+|++.|++++
T Consensus 340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 3567889999999999999999999999999864
No 34
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=335.89 Aligned_cols=262 Identities=25% Similarity=0.344 Sum_probs=210.7
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+.|+....||.|..+.||+|+. ..++.||||+++... ....+.+++|+..|+.++||||++.+..|..+.++|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 5688888999999999999985 467999999987653 34468899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC-
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ- 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~- 658 (845)
|.+||+.+.+...-...+++..+..|++++++||.|||+ +|.||||||+.||||+++|.+||+|||.+-.......
T Consensus 106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 999999999976544569999999999999999999999 9999999999999999999999999999765333221
Q ss_pred cccc-cccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 659 THVS-TAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 659 ~~~~-~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.... ....||+.|||||+++. ..|+.|+||||||+...||.+|..||....+-+.. ....... .....-.
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvL-----l~tLqn~--pp~~~t~ 255 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVL-----LLTLQND--PPTLLTS 255 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHH-----HHHhcCC--CCCcccc
Confidence 1112 56789999999999654 57999999999999999999999999866553311 1111111 1100011
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+..+......+.+.+++..||++||.+|||++++++.
T Consensus 256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11122223455689999999999999999999998765
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-38 Score=335.22 Aligned_cols=270 Identities=27% Similarity=0.384 Sum_probs=201.7
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHh--CCCCCcceEEEEEecCC----cEEEEEEe
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSK--LRHRHLVSLIGYCDERS----EMILVYEY 579 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~g~~~~~~----~~~lV~Ey 579 (845)
...+||+|+||.||||.++ ++.||||++.. +..+.|++|-++.+. ++|+||++++++-.... +++||+||
T Consensus 214 l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 214 LLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred hHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 3447999999999999997 59999999764 455678888888875 58999999999876555 89999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC------CCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGA------AQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
.++|+|.++|..+ .++|....+|+..+++||+|||++. .++|+|||||++||||.+|+.+.|+|||||...
T Consensus 290 h~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~ 366 (534)
T KOG3653|consen 290 HPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRL 366 (534)
T ss_pred ccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEe
Confidence 9999999999654 6999999999999999999999753 467999999999999999999999999999875
Q ss_pred CCCCCcccccccccCCCcCChhhhccCC-CC-----chhHHHHHHHHHHHHHcCCCCCCCCC-CcccccHHHHHHHHhhc
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQ-LT-----EKSDVYSFGVVLMEVLCTRPALNPVL-PREQVNIAEWAMTWQKK 726 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~ksDV~S~Gvvl~Elltg~~p~~~~~-~~~~~~l~~~~~~~~~~ 726 (845)
............+||.+|||||++.+.- +. .+.||||+|.|||||++....++... +.-+.....-+.....-
T Consensus 367 ~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~ 446 (534)
T KOG3653|consen 367 EPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL 446 (534)
T ss_pred cCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence 5433334444689999999999997642 22 37999999999999999876553211 11111110000000000
Q ss_pred Cchhh-hhccccCCCCC-----HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 727 GMLDQ-IMDSNLVGKVN-----PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 727 ~~~~~-~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
+.+++ ++..+.+..++ -.-+..+.+.+..||..||+.|.|+.=|.+.+.++..+.+
T Consensus 447 e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 447 EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 00000 01111111111 1346678999999999999999999999998887765554
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-38 Score=344.21 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=203.1
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
|+..+.||+|+||.||+|... +|+.+|+|.+.... ......+.+|++++++++|+||+++.+++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 677889999999999999864 78999999876432 23345678999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++|+|..++.......+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... .
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~---~ 155 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE---G 155 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC---C
Confidence 999999988765444578999999999999999999999 9999999999999999999999999999976332 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......||..|+|||++.+..++.++|||||||++|||++|+.||......... ... .. .+... ..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~--~~~-~~--------~~~~~--~~ 222 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR--EEV-DR--------RVKED--QE 222 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH--HHH-HH--------Hhhcc--cc
Confidence 1223457899999999999999999999999999999999999999754332111 000 00 00000 11
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~ 773 (845)
.++......+.+++.+||+.+|.+||+ +++++++
T Consensus 223 ~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 223 EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 233344567889999999999999997 7887765
No 37
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.3e-38 Score=337.89 Aligned_cols=255 Identities=22% Similarity=0.358 Sum_probs=205.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc----CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD----DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|++.+.||+|+||.||+|.++ .+..+|+|.+... +....+.|.+|+.++++++||||++++|++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46788889999999999999864 3568999987765 334456799999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++|+|.+++.... ..++|.+++.++.|++.||+|||+ .+++||||||+|||+++++.+|++|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~- 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS- 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccccc-
Confidence 99999999999986542 478999999999999999999998 8999999999999999999999999998765321
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
..........++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ + .. ...++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~---~~-~~~~~-------- 224 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---V---IK-AVEDG-------- 224 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---H---HH-HHHCC--------
Confidence 11111112345678999999999999999999999999999875 999986543221 1 11 11111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+..++..+.+++.+||+.+|.+||++.+|++.|+..
T Consensus 225 -~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 -FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11122344567889999999999999999999999988764
No 38
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=350.27 Aligned_cols=252 Identities=26% Similarity=0.380 Sum_probs=208.4
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC----Ch-HhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR----SE-QGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSE 572 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~ 572 (845)
..++|...+.||+|.||.|++|... +++.||+|.++.. .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4567888999999999999999865 6899999976553 12 23445668999999999 9999999999999999
Q ss_pred EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccccC
Q 003139 573 MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGLSK 651 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGla~ 651 (845)
.++||||+.+|+|.+++.. .+++.+.+..+++.|++.|++|||+ ++|+||||||+|||+|.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 9999999999999999976 4678999999999999999999999 999999999999999999 999999999998
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCC-CC-chhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQ-LT-EKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+...... ...
T Consensus 170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~------l~~-------- 233 (370)
T KOG0583|consen 170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN------LYR-------- 233 (370)
T ss_pred ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH------HHH--------
Confidence 753 2334456789999999999999977 86 78999999999999999999997632111 111
Q ss_pred hhhhccccCCCCCHHH-HHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 730 DQIMDSNLVGKVNPAS-LKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~-~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+..... .++... ...+..++.+|+..+|.+|+++.+|+..=+
T Consensus 234 -ki~~~~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 234 -KIRKGEF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred -HHhcCCc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 1111111 123333 677889999999999999999999994433
No 39
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.3e-38 Score=339.60 Aligned_cols=255 Identities=29% Similarity=0.452 Sum_probs=207.2
Q ss_pred CCCcceeeeeeceEEEEEEEEcC-C-----cEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD-G-----TKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~-g-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
+|+..+.||+|+||.||+|.... + ..+++|.+.... ....++|.+|++++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 85 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM 85 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence 57778899999999999998643 2 569999876543 3445679999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc
Q 003139 576 VYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV 641 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~ 641 (845)
+|||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+||++++++.
T Consensus 86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCc
Confidence 999999999999886431 1468899999999999999999999 89999999999999999999
Q ss_pred eEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHH
Q 003139 642 AKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWA 720 (845)
Q Consensus 642 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~ 720 (845)
+||+|||+++.....+.........++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ +..+
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~- 238 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEM- 238 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH-
Confidence 99999999976433222222334456788999999999999999999999999999998 999986543221 1111
Q ss_pred HHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 721 MTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
... ......+..++..+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 239 ---i~~---------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 ---IRS---------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHc---------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111 11112334566789999999999999999999999999874
No 40
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-38 Score=315.47 Aligned_cols=262 Identities=24% Similarity=0.310 Sum_probs=207.7
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHh--HHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQG--IAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|...+.||+|.||.||+|+.. +|+.||||++......+ ....++|++.|+.++|+||+.|++++...+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 4666778999999999999854 79999999987654321 34578999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
|+ .+|...++.+. ..++-.++..++.++++||+|||+ +.|+||||||.|+||+++|.+||+|||+|+.....+..
T Consensus 83 m~-tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 83 MP-TDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred cc-ccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 96 58888886554 578899999999999999999999 89999999999999999999999999999986654433
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc----------
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM---------- 728 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---------- 728 (845)
. +..+-|..|+|||.+.+ ++|+..+|+||.|||+.||+-|.+.|.+...-++...+- ....-..
T Consensus 158 ~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If---~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 158 Q--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIF---RALGTPTPDQWPEMTSL 232 (318)
T ss_pred c--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHH---HHcCCCCcccCcccccc
Confidence 3 33477899999998876 689999999999999999999999887766555433211 1111100
Q ss_pred -----hhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 729 -----LDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 729 -----~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+...-.+.+. ..-+.......+++..++..||.+|++++|++++=-
T Consensus 233 pdY~~~~~~P~~~~~-~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLN-NLFPAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred ccHHHHhcCCCCccc-cccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 0101111111 122345566689999999999999999999987643
No 41
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.2e-38 Score=333.38 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=207.8
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
+|...+.||+|+||.||+|... .++.+++|..... ....+++.+|++++++++|+||++++++|...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 4677789999999999999875 5788999987644 3345789999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++..++.++.|+++||+|||+ .+++||||||+|||+++++.+||+|||+++...... ...
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~-~~~ 161 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTA 161 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce-eec
Confidence 9999999876555679999999999999999999998 899999999999999999999999999997643211 111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||.+.+..++.++|||||||++|||++ |..|+...... ++... .. ......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~------~~~~~-~~---------~~~~~~ 225 (263)
T cd05052 162 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYEL-LE---------KGYRME 225 (263)
T ss_pred cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHH-HH---------CCCCCC
Confidence 112334668999999999999999999999999999998 88887643221 11111 11 111122
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 3344567899999999999999999999999999864
No 42
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.1e-38 Score=342.51 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=206.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
.+|+..+.||+|+||.||+|++. +++ .||+|.+... .....++|.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 45888999999999999999864 343 3899988654 345567899999999999999999999999764 5789
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
|+||+++|+|.+++.... ..+++..+++++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccccC
Confidence 999999999999986543 468999999999999999999998 8999999999999999999999999999986543
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||++.+..++.++|||||||++|||++ |+.|+......+ +. .....
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~----~~~~~-------- 226 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEK-------- 226 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HH----HHHhC--------
Confidence 222222223344678999999999999999999999999999997 999886432211 11 11111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
......+..+...+.+++.+||+.+|.+||++.+++..|..+...+
T Consensus 227 -~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 227 -GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 1111122334567889999999999999999999999988775543
No 43
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.5e-38 Score=353.28 Aligned_cols=260 Identities=24% Similarity=0.342 Sum_probs=206.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSE 572 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~ 572 (845)
.++|.+.++||+|+||.||+|+.. .+..||||++.... ....+.|.+|+++++++. ||||++++++|.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888889999999999999853 13469999986543 344567999999999996 9999999999999999
Q ss_pred EEEEEEeccCCCccccccCCC-----------------------------------------------------------
Q 003139 573 MILVYEYMANGPLRSHLYGTD----------------------------------------------------------- 593 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------- 593 (845)
.+|||||+++|+|.++|+...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999988875321
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC
Q 003139 594 -----------------------------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD 638 (845)
Q Consensus 594 -----------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~ 638 (845)
...+++.++++++.|+++||+|||+ .+|+||||||+|||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence 1247889999999999999999998 89999999999999999
Q ss_pred CCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHH
Q 003139 639 NFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIA 717 (845)
Q Consensus 639 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~ 717 (845)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~---- 348 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST---- 348 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH----
Confidence 99999999999976432222122223456788999999999999999999999999999997 8888864322111
Q ss_pred HHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 718 EWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
.......+ .....+...+..+.+++.+||+.+|++||++.+|.+.|+.+.
T Consensus 349 --~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 349 --FYNKIKSG---------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred --HHHHHhcC---------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 01111111 111122345677899999999999999999999999999764
No 44
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.7e-38 Score=333.54 Aligned_cols=254 Identities=24% Similarity=0.414 Sum_probs=207.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|+..+.||+|+||.||+|...+++.+++|.+.... ...+.+.+|+.++++++|+||+++++.+.+.+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 4678888999999999999998888899999876543 335788999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++...... ...
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~ 160 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTA 160 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCc-eec
Confidence 9999999976555678999999999999999999998 899999999999999999999999999998643211 111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||++....++.++|||||||++|||++ |+.||......+ ...+ ...+. ...
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~----~~~~~---------~~~ 224 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSA----LQRGY---------RMP 224 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHH----HHcCC---------CCC
Confidence 223345678999999999999999999999999999998 888885432211 1111 11110 001
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.....+..+.+++.+|+..+|++||+++++++.|+.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 225 RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 112345678899999999999999999999999875
No 45
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=346.88 Aligned_cols=257 Identities=25% Similarity=0.408 Sum_probs=217.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.+..-.++||-|-||.||.|.|+. .-.||||.++... -..++|+.|..+|+.++|||+|+|+|+|..+..+|||.|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 344556689999999999999974 4579999887543 45789999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
.+|+|.++|++.++..++-..++.++.||+.||+||.. +++|||||.++|+|+.++..+||+||||+|++.. +...
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg-DTYT 421 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG-DTYT 421 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcC-Ccee
Confidence 99999999998888888889999999999999999998 9999999999999999999999999999998654 2322
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCT-RPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.....+-.+.|.|||.+....++.|+|||+|||+||||.|- -.|+.+ +++.+ +..+++...+-
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG------idlSq----------VY~LLEkgyRM 485 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQ----------VYGLLEKGYRM 485 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC------ccHHH----------HHHHHhccccc
Confidence 33345567899999999999999999999999999999984 444432 22221 22333333444
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+-++.|+.++.+|++.||+.+|.+||++.|+-+.+|....
T Consensus 486 ~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 486 DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 5678899999999999999999999999999999998765
No 46
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-37 Score=336.44 Aligned_cols=259 Identities=27% Similarity=0.412 Sum_probs=210.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++|...+.||+|+||.||+|+.. ++..+++|..........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 34667789999999999999743 345689999877766666789999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc
Q 003139 576 VYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV 641 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~ 641 (845)
||||+++++|.+++.... ...++|..+++++.|++.||+|||+ ++|+||||||+|||+++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 999999999999986432 2358999999999999999999998 99999999999999999999
Q ss_pred eEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHH
Q 003139 642 AKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWA 720 (845)
Q Consensus 642 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~ 720 (845)
+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~--- 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VI--- 235 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---
Confidence 99999999976433222222334456788999999999999999999999999999998 999886543221 11
Q ss_pred HHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 721 MTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
.....+.. ...+..++..+.+++.+||+.+|.+||++.+|+++|+.+..
T Consensus 236 -~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 236 -ECITQGRV---------LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred -HHHhCCCC---------CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 11111111 11223345678999999999999999999999999998854
No 47
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.4e-38 Score=345.66 Aligned_cols=260 Identities=26% Similarity=0.392 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEec-CCc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDE-RSE 572 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-~~~ 572 (845)
++|++.+.||+|+||.||+|... .++.||+|++.... ....+.+.+|++++.++ +|+||++++++|.. +..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 46888899999999999999642 24689999876542 34456788999999999 89999999998864 456
Q ss_pred EEEEEEeccCCCccccccCCC-----------------------------------------------------------
Q 003139 573 MILVYEYMANGPLRSHLYGTD----------------------------------------------------------- 593 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------- 593 (845)
.+++|||+++++|.+++....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 889999999999988874321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCC
Q 003139 594 LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLD 673 (845)
Q Consensus 594 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~a 673 (845)
..+++|..+.+++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++...............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 1368999999999999999999998 8999999999999999999999999999986432221112223456778999
Q ss_pred hhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHH
Q 003139 674 PEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGET 752 (845)
Q Consensus 674 PE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l 752 (845)
||++.+..++.++|||||||+|+||++ |+.||......+. ......++. ....+......+.++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~~~~~l 308 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE------FCRRLKEGT---------RMRAPEYATPEIYSI 308 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH------HHHHHhccC---------CCCCCccCCHHHHHH
Confidence 999999999999999999999999998 9998865332211 111111111 111223345678999
Q ss_pred HHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 753 AEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 753 ~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+.+||+.+|++||++.+++++|+.+++
T Consensus 309 ~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 309 MLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998765
No 48
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.8e-38 Score=332.82 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=212.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
..+|+..+.||+|+||.||+|...++..+++|.+.........++..|+.+++.++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 35677888999999999999998888999999987766656778999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.......+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++...... ..
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~--~~ 159 (261)
T cd05148 85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKED--VY 159 (261)
T ss_pred ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCc--cc
Confidence 99999999977656679999999999999999999998 89999999999999999999999999999764321 11
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......++..|+|||.+.++.++.++||||||++++||++ |+.||......+ .... +. .....
T Consensus 160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~------------~~-~~~~~ 223 (261)
T cd05148 160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQ------------IT-AGYRM 223 (261)
T ss_pred cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHH------------HH-hCCcC
Confidence 1223345678999999999999999999999999999998 888886433211 1111 11 11111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
..+..++..+.+++.+||+.+|.+|||+.++++.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2234456778899999999999999999999999975
No 49
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.7e-38 Score=344.14 Aligned_cols=264 Identities=23% Similarity=0.297 Sum_probs=206.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||+|+||.||+++.. +|..+|+|.+... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 67888999999999999999976 6788999987654 334457899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+++..+..++.|++.||.|||+ ..+|+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 156 (331)
T cd06649 85 MDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 156 (331)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccc----
Confidence 9999999998543 368999999999999999999997 24699999999999999999999999999875322
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc-------------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK------------- 726 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------- 726 (845)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||......+ +..........
T Consensus 157 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCccc
Confidence 11234568999999999999999999999999999999999999996432211 10000000000
Q ss_pred -----------------Cchhhhhc----cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 727 -----------------GMLDQIMD----SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 727 -----------------~~~~~~~d----~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
....++.+ ..............+.+++.+||+.||++|||+.+++++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 00000011 000000112345678999999999999999999999987543
No 50
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.2e-37 Score=331.12 Aligned_cols=255 Identities=29% Similarity=0.446 Sum_probs=207.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.++|+..+.||+|++|.||+|...+++.||+|.+.... ...+++.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 35688889999999999999998778889999876543 23467899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.......++|.++.+++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++...... ..
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI-YE 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc-cc
Confidence 99999999976554578999999999999999999998 899999999999999999999999999997643211 11
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......+..|+|||++.+..++.++||||||++++||++ |+.||....... + ...... ....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~----~~~~~~---------~~~~ 223 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---V----LQQVDQ---------GYRM 223 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---H----HHHHHc---------CCCC
Confidence 1112223457999999999999999999999999999999 888886432211 0 011111 1111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
..+...+..+.+++.+|++.+|.+||++.++++.|+.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1223455778999999999999999999999999875
No 51
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.3e-37 Score=329.86 Aligned_cols=251 Identities=29% Similarity=0.422 Sum_probs=202.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|+..+.||+|+||.||++.++++..+|+|...... ...++|.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 4577788999999999999999888889999876432 234678999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+|+|.+++.... ..++|..++.++.|++.||+|||+ ++|+||||||+||++++++.+||+|||+++..... ....
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~-~~~~ 157 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD-EYTS 157 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCC-ceec
Confidence 999999886543 368999999999999999999998 89999999999999999999999999998764321 1111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . .... .++. .. .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~---~---~~~i-~~~~--~~-------~ 221 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE---V---VEMI-SRGF--RL-------Y 221 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H---HHHH-HCCC--CC-------C
Confidence 223345668999999998899999999999999999999 888886433211 1 1111 1110 00 0
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.+...+..+.+++.+||+.+|.+||++.++++.|
T Consensus 222 ~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1122345788999999999999999999999876
No 52
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.9e-38 Score=339.42 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=205.9
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
..++|+..+.||+|+||.||+++-+ +|..+|+|++++.. ..+.+..+.|-.+|....+|+||+|+..+.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999865 69999999988753 3456778899999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||||+|||++..+|.. ...|++.....++.+++.||+-||+ .|+|||||||+|+|||..|++||+||||+.-...
T Consensus 219 iMEylPGGD~mTLL~~--~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR--KDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHh--cCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999954 4579999999999999999999999 9999999999999999999999999999842100
Q ss_pred ----------------------CCCc-----------------------ccccccccCCCcCChhhhccCCCCchhHHHH
Q 003139 656 ----------------------LDQT-----------------------HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYS 690 (845)
Q Consensus 656 ----------------------~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S 690 (845)
.+.. ......+|||.|||||++.+..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 0012357999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccc-ccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC---
Q 003139 691 FGVVLMEVLCTRPALNPVLPREQ-VNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS--- 766 (845)
Q Consensus 691 ~Gvvl~Elltg~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs--- 766 (845)
+||||||||.|-+||....+.+. ..+..|...+.. ........+..++|.+|+. ||++|..
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f--------------P~~~~~s~eA~DLI~rll~-d~~~RLG~~G 438 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF--------------PEEVDLSDEAKDLITRLLC-DPENRLGSKG 438 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC--------------CCcCcccHHHHHHHHHHhc-CHHHhcCccc
Confidence 99999999999999988776552 233344322111 1112233667799999998 9999975
Q ss_pred HHHHHH
Q 003139 767 MGDVLW 772 (845)
Q Consensus 767 ~~~vl~ 772 (845)
++||-+
T Consensus 439 ~~EIK~ 444 (550)
T KOG0605|consen 439 AEEIKK 444 (550)
T ss_pred HHHHhc
Confidence 444443
No 53
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.1e-37 Score=330.22 Aligned_cols=256 Identities=25% Similarity=0.410 Sum_probs=207.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC----CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD----GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..+.||+|+||.||+|.+.. ...+++|..... ......+|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568888999999999999998752 357899987654 344457899999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|.+++.... ..+++.++++++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 84 TEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999986543 478999999999999999999998 99999999999999999999999999999875422
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ +.. ...++
T Consensus 160 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~---~~~----~~~~~-------- 224 (266)
T cd05033 160 EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD---VIK----AVEDG-------- 224 (266)
T ss_pred ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH---HHH----HHHcC--------
Confidence 22222223345678999999999999999999999999999998 988885432111 111 11111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+...+..+.+++.+|++.+|++||++.+|+++|+.+
T Consensus 225 -~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 -YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01112234456789999999999999999999999999875
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.7e-38 Score=346.25 Aligned_cols=242 Identities=24% Similarity=0.314 Sum_probs=198.4
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
+.||+|+||.||+++.. +|+.+|+|.+... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999875 6889999987643 2334567889999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVST 663 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 663 (845)
+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~--~~~~~~ 153 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS--DGATMK 153 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc--CCCccc
Confidence 999888543 478999999999999999999999 8999999999999999999999999999875322 112233
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... +.. .+.... ..++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~------------~~~~~~--~~~p~ 216 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFE------------LILMEE--IRFPR 216 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHH------------HHHcCC--CCCCC
Confidence 4679999999999999999999999999999999999999996432111 110 011111 12233
Q ss_pred HHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 744 ASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.....+.+++.+||+.||++|| ++.+++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 217 TLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 4556788999999999999999 78888764
No 55
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-38 Score=348.28 Aligned_cols=248 Identities=24% Similarity=0.303 Sum_probs=208.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
-|+..+.||+|+-|.|-+|++. +|+.+|||.+... +......+.+|+-+|+.+.|||+++|++++++..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 3556678999999999999975 7999999987655 22334567789999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++|.|.++|..+ +++.+.+..++++||+.|+.|+|. .+|+||||||+|+|||..+++||+|||+|.+.. .
T Consensus 93 yv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~---~ 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEV---P 164 (786)
T ss_pred ecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeeccc---C
Confidence 99999999999544 589999999999999999999999 999999999999999999999999999997622 2
Q ss_pred cccccccccCCCcCChhhhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLT-EKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......-+|++.|.+||++++.+|. .++||||+|||||.||+|+.||++..-+. .. ...+.|.
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~------LL-lKV~~G~--------- 228 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV------LL-LKVQRGV--------- 228 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH------HH-HHHHcCc---------
Confidence 2334467899999999999999985 79999999999999999999998533211 11 1112221
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
-+.+..+..+.++|+.+|+..||+.|.|++||+++-.
T Consensus 229 -f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 229 -FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred -ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCch
Confidence 1234566778899999999999999999999998754
No 56
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-37 Score=334.75 Aligned_cols=259 Identities=28% Similarity=0.419 Sum_probs=209.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++|.+.+.||+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46788889999999999999752 345689998877776677889999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEE
Q 003139 576 VYEYMANGPLRSHLYGTD-----------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKV 644 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 644 (845)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 999999999998885321 2358999999999999999999998 89999999999999999999999
Q ss_pred EeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHH
Q 003139 645 ADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTW 723 (845)
Q Consensus 645 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~ 723 (845)
+|||+++...............++..|+|||.+.+..++.++|||||||+++||++ |++||......+ . . ..
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~---~-~~ 234 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---V---I-EC 234 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---H---H-HH
Confidence 99999976432222222223445778999999999999999999999999999998 888885443211 1 1 11
Q ss_pred hhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 724 QKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
...+.. ...+...+..+.+++.+||+.+|.+||++.++++.|+.+.+
T Consensus 235 i~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 235 ITQGRV---------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHcCCc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 111111 01122344578999999999999999999999999988764
No 57
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.8e-38 Score=340.91 Aligned_cols=247 Identities=23% Similarity=0.262 Sum_probs=202.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+|... +|+.+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36788899999999999999976 68899999875432 234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~-- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhccC--
Confidence 999999999998543 468999999999999999999999 9999999999999999999999999999976432
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ... .+.....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~------~~~---------~i~~~~~ 215 (291)
T cd05612 154 ---RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG------IYE---------KILAGKL 215 (291)
T ss_pred ---CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH---------HHHhCCc
Confidence 1223568999999999999999999999999999999999999986543211 111 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWNLE 775 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~L~ 775 (845)
.++......+.+++.+||+.||.+||+ +.+++++-.
T Consensus 216 --~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 216 --EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred --CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 122333567889999999999999995 888776643
No 58
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=358.84 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=205.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-C-CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-D-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.|...+.||+|+||.||+|... + ++.||+|............+.+|+.+++.++||||+++++++...+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3778889999999999999854 3 6778899876666666677889999999999999999999999999999999999
Q ss_pred cCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 581 ANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 581 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
++|+|.++|... ...++++.++..++.|++.||+|||+ ++|+||||||+||||++++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999887542 34578999999999999999999998 8999999999999999999999999999986433222
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +... .++....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~------~~~~---------~~~~~~~- 288 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR------EIMQ---------QVLYGKY- 288 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHH---------HHHhCCC-
Confidence 22334567999999999999999999999999999999999999998643221 1111 1111111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+......+.+++.+||+.+|++||++.+++..
T Consensus 289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 01223345678899999999999999999998753
No 59
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.1e-37 Score=334.90 Aligned_cols=255 Identities=28% Similarity=0.441 Sum_probs=206.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC------CcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD------GTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMI 574 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~------g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 574 (845)
++|...+.||+|+||.||+|...+ +..+|+|.+...... ..++|.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457777899999999999998643 468999988765443 5678999999999999999999999999999999
Q ss_pred EEEEeccCCCccccccCCC------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 575 LVYEYMANGPLRSHLYGTD------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
+||||+++++|.+++.... ...+++.++..++.|++.||+|||+ ++++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999986432 2458899999999999999999998 899999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~ 721 (845)
||+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~-- 236 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIEC-- 236 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHH--
Confidence 9999999975432222222233445788999999999999999999999999999998 999886433221 1111
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
...+. ....+...+..+.+++.+||+.+|++||++.||++.|+
T Consensus 237 --~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 237 --ITQGR---------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHcCC---------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11111 11122345677899999999999999999999999885
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.3e-38 Score=346.59 Aligned_cols=254 Identities=26% Similarity=0.343 Sum_probs=205.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46888999999999999999976 5889999987643 2234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++.++..++.|++.||.|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999998543 468999999999999999999999 9999999999999999999999999999976332
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.. ...... . ..+....
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~--~----~~~~~~~ 221 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW---ENLKYW--K----ETLQRPV 221 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH---HHHHhc--c----ccccCCC
Confidence 234567899999999999999999999999999999999999999754332211 000000 0 0010000
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
...........+.+++.+||..+|.+||++.+++++-
T Consensus 222 ~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 222 YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence 0001123456788999999999999999999998763
No 61
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-37 Score=333.13 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=204.3
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE 572 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 572 (845)
.+++|+..+.||+|+||.||+|.+. .+..+|+|+.... ......+|.+|+.+++.++||||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567889999999999999999753 2467999987643 33445678999999999999999999999999999
Q ss_pred EEEEEEeccCCCccccccCCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEE
Q 003139 573 MILVYEYMANGPLRSHLYGTD--------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKV 644 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 644 (845)
.++||||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999885421 2346899999999999999999998 89999999999999999999999
Q ss_pred EeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHH
Q 003139 645 ADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTW 723 (845)
Q Consensus 645 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~ 723 (845)
+|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||......+ .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~------~~~~~ 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ------VLRFV 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHHH
Confidence 99999875432222121222345778999999999999999999999999999999 677875432211 11111
Q ss_pred hhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 724 QKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.++. . ...+...+..+.+++.+|++.+|++||++.|+++.|+
T Consensus 235 -~~~~--------~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 235 -MEGG--------L-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -HcCC--------c-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1111 0 1122344567899999999999999999999999876
No 62
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=330.72 Aligned_cols=260 Identities=27% Similarity=0.375 Sum_probs=209.1
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh--------------HhHHHHHHHHHHHHhCCCCCcceEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE--------------QGIAEFRTEIEMLSKLRHRHLVSLI 564 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~niv~l~ 564 (845)
.-++|++.+.||+|.||.|-+|+.. +++.||||.+.+... ..++...+|+.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3478899999999999999999865 789999998654311 1235788999999999999999999
Q ss_pred EEEecC--CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 565 GYCDER--SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 565 g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
.+..+. +.+|||+|||..|.+...- .....|+..+.+++++++..||+|||. ++||||||||+|+||+++|++
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCcE
Confidence 998664 5799999999998876543 222339999999999999999999999 999999999999999999999
Q ss_pred EEEeccccCCCCCC---CCcccccccccCCCcCChhhhccCC----CCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc
Q 003139 643 KVADFGLSKTGPAL---DQTHVSTAVKGSFGYLDPEYFRRQQ----LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN 715 (845)
Q Consensus 643 kl~DFGla~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~ 715 (845)
||+|||.+...+.. +.........||+.|+|||...++. .+.+.||||+||.||.|+.|+.||......+
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~--- 326 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE--- 326 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH---
Confidence 99999999754221 1111123478999999999987632 3568999999999999999999997543322
Q ss_pred HHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 716 IAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 716 l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
..++|+...+.-...+++.+.+.+|++++|.+||++|.+..+|..+..-...
T Consensus 327 ------------l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 327 ------------LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ------------HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 2345555555544456678899999999999999999999999887765443
No 63
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-39 Score=311.51 Aligned_cols=250 Identities=27% Similarity=0.390 Sum_probs=213.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|++.+.||+|.||.||.|+.+ ++-.||+|.+.... .+..+++.+|+++-+.|+||||+++++|+.+....||++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 46889999999999999999966 67789999875432 223467889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||.++|+|...|.+....+++......++.|+|.||.|+|. +++|||||||+|+|++..+..||+|||.+...+
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p--- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--- 175 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeecC---
Confidence 99999999999987777789999999999999999999998 999999999999999999999999999987632
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.......+||..|++||...+...+.++|+|++|++.+|++.|.+||......+ ...++...++
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---------------tYkrI~k~~~ 239 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---------------TYKRIRKVDL 239 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---------------HHHHHHHccc
Confidence 233456899999999999999999999999999999999999999997544211 2223332222
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.++........+++.+|+..+|.+|.+..|++++-.
T Consensus 240 --~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 240 --KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred --cCCcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 234556677889999999999999999999987643
No 64
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.7e-38 Score=346.29 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=201.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+|+.. +++.+|+|.+... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788889999999999999976 6889999987543 2234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+||||++++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 999999999998643 468899999999999999999999 99999999999999999999999999999764321
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .. ..+....+
T Consensus 172 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~---------~~i~~~~~ 232 (329)
T PTZ00263 172 ----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR------IY---------EKILAGRL 232 (329)
T ss_pred ----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH------HH---------HHHhcCCc
Confidence 123578999999999999999999999999999999999999996533211 00 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~ 773 (845)
.++......+.+++.+||+.||.+||+ +.+++.+
T Consensus 233 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 --KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 122234456889999999999999997 6777655
No 65
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.1e-37 Score=335.62 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=207.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
++|...+.||+|+||.||++... .+..+|+|++.... ....+.+.+|+++++++ +|+||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 46888889999999999999742 34579999876543 34456789999999999 799999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++|+|.+++.......+++.+++.++.|++.||+|||+ ++|+|+||||+|||+++++.+||+|||+++..
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 999999999999999875544458999999999999999999998 89999999999999999999999999999764
Q ss_pred CCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
.............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. .. . .
T Consensus 192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~----~---------~ 256 (302)
T cd05055 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FY----K---------L 256 (302)
T ss_pred cCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HH----H---------H
Confidence 33222112223345778999999999999999999999999999998 8988864432211 10 1 1
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.+.......+......+.+++.+|++.+|++||++.++++.|+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111111111223356789999999999999999999999999874
No 66
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.3e-38 Score=336.90 Aligned_cols=266 Identities=20% Similarity=0.228 Sum_probs=202.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|++.+.||+|+||.||+++.+ +++.+|+|++... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999986 5788999987643 23345678899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++++.|..+... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG-S 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCccccccc-c
Confidence 9998877655422 2468999999999999999999998 89999999999999999999999999999864321 1
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHH---------HHHHhhcCch
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEW---------AMTWQKKGML 729 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~---------~~~~~~~~~~ 729 (845)
........|+..|+|||++.+..++.++|||||||++|||++|++||......+....... ..........
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchh
Confidence 1122345689999999999999999999999999999999999999975433221110000 0000000000
Q ss_pred hhhhccccCC------CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 DQIMDSNLVG------KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ~~~~d~~l~~------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....+.... .........+.+++.+||+.||++|||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 0111234568999999999999999999998753
No 67
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.1e-37 Score=332.24 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=203.6
Q ss_pred CCCcceeeeeeceEEEEEEEE-----cCCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTL-----DDGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
.|+..+.||+|+||.||+|.+ ..+..+++|.+... ..+..++|.+|++++++++||||+++++++......++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEE
Confidence 467778999999999999984 24578999988643 344557899999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCC---------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc
Q 003139 577 YEYMANGPLRSHLYGTD---------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV 641 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~ 641 (845)
|||+++++|.+++.... ...+++.+++.++.|++.||+|||+ ++++||||||+|||+++++.
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCc
Confidence 99999999999884221 2358899999999999999999998 89999999999999999999
Q ss_pred eEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHH
Q 003139 642 AKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWA 720 (845)
Q Consensus 642 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~ 720 (845)
+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||......+ +
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~---~---- 235 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE---V---- 235 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---H----
Confidence 99999999976433222222334446778999999998899999999999999999998 888886432211 1
Q ss_pred HHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 721 MTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
........ ....+...+..+.+++.+|++.+|++||++.+|++.|.
T Consensus 236 ~~~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 236 IEMVRKRQ---------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 11111111 11122344567889999999999999999999998875
No 68
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-38 Score=339.10 Aligned_cols=257 Identities=28% Similarity=0.418 Sum_probs=214.0
Q ss_pred CCcceeeeeeceEEEEEEEEcC---Cc--EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLDD---GT--KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~---g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
....++||+|-||.||+|...+ |+ .||||..+.. ..+..+.|+.|..+|++++||||++|+|+|.+ ...+|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wivm 469 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVM 469 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEE
Confidence 3445689999999999998542 33 4888977663 45567899999999999999999999999976 5789999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
|.++.|.|+.+|..++ ..|+......++.||+.+|.|||+ ..+|||||..+|||+.+.-.+||+||||+|...+.
T Consensus 470 EL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~- 544 (974)
T KOG4257|consen 470 ELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD- 544 (974)
T ss_pred ecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhcccc-
Confidence 9999999999997554 578999999999999999999999 99999999999999999999999999999986642
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.....+...-.+.|||||.+.-+++|.+||||.|||++||++. |..||.+....+-. . .++..
T Consensus 545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI---------------~-~iEnG 608 (974)
T KOG4257|consen 545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI---------------G-HIENG 608 (974)
T ss_pred chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE---------------E-EecCC
Confidence 2333345566789999999999999999999999999999875 88999765433311 1 11122
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
-+-..++.|+..+..+..+||..+|.+||.+.++...|..+++.+.
T Consensus 609 eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek 654 (974)
T KOG4257|consen 609 ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK 654 (974)
T ss_pred CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence 2234678899999999999999999999999999999999887443
No 69
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.8e-37 Score=335.68 Aligned_cols=259 Identities=26% Similarity=0.456 Sum_probs=208.1
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC------CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCc
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD------GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSE 572 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~ 572 (845)
.++|+..+.||+|+||.||++...+ ...+|+|..... ..+...++.+|++++.++ +|+||+++++++...+.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 4568888899999999999998642 357899987653 344557789999999999 89999999999999999
Q ss_pred EEEEEEeccCCCccccccC--------------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC
Q 003139 573 MILVYEYMANGPLRSHLYG--------------TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD 638 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~--------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~ 638 (845)
.+++|||+++|+|..++.. .....+++..+++++.|++.||+|||+ .+|+||||||+|||+++
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcC
Confidence 9999999999999998853 223568999999999999999999998 89999999999999999
Q ss_pred CCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHH
Q 003139 639 NFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIA 717 (845)
Q Consensus 639 ~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~ 717 (845)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+......+.
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---- 243 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL---- 243 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH----
Confidence 99999999999986543222222223345678999999999999999999999999999998 8888754322110
Q ss_pred HHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 718 EWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
.. .+........+......+.+++.+|++.+|++|||+.++++.|+.++
T Consensus 244 ---~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 ---FK---------LLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---HH---------HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 01 11111111223345567889999999999999999999999998764
No 70
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5e-37 Score=331.85 Aligned_cols=258 Identities=25% Similarity=0.388 Sum_probs=205.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
+|+..+.||+|+||.||+|... ....+++|...... ....+++.+|+.+++.++||||+++++.|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4667789999999999999853 23468888776543 3456789999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCC----------------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCc
Q 003139 576 VYEYMANGPLRSHLYGT----------------------DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTN 633 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~----------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~N 633 (845)
|+||+++++|.+++... ...++++.+++.++.|++.||+|||+ .+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 99999999999887532 12358899999999999999999998 999999999999
Q ss_pred EEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcc
Q 003139 634 ILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPRE 712 (845)
Q Consensus 634 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~ 712 (845)
||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||++++||++ |+.||....+.+
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 237 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER 237 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 9999999999999999976432222111223345678999999999999999999999999999998 998886543221
Q ss_pred cccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 713 QVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+. ....+ ......+......+.+++.+|++.+|++||++.++++.|+++..
T Consensus 238 ---~~----~~~~~---------~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 238 ---LF----NLLKT---------GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ---HH----HHHhC---------CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11 11111 11112233445678899999999999999999999999998753
No 71
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.5e-37 Score=330.39 Aligned_cols=257 Identities=25% Similarity=0.379 Sum_probs=203.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++|+..+.||+|+||.||+|.+. +++ .+++|...... ....+++..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 35677789999999999999874 344 47888775443 3445678889999999999999999999864 56789
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
++||+++|+|.+++.... ..++|..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999996543 468999999999999999999998 8999999999999999999999999999986433
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||.+.++.++.++|||||||++|||++ |+.||......+ +.++ ..++.
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~----~~~~~------ 228 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDL----LEKGE------ 228 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH----HHCCC------
Confidence 222222334567789999999999999999999999999999998 998886543221 1111 11111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
....+..+...+.+++.+|+..+|++||++.|+++.|+.+.+
T Consensus 229 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 229 ---RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 001112234567889999999999999999999999888654
No 72
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.9e-37 Score=327.49 Aligned_cols=251 Identities=30% Similarity=0.411 Sum_probs=202.4
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+|...+.||+|+||.||+|...++..+|+|.+.... ...++|.+|+.++++++||||+++++++.+....++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 467778999999999999998777779999876443 2346789999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|.+++.... ..+++.++++++.|++.||+|||+ .+++|+||||+|||+++++.+||+|||+++..... .....
T Consensus 84 ~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~-~~~~~ 158 (256)
T cd05113 84 GCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD-EYTSS 158 (256)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCC-ceeec
Confidence 99999986543 368999999999999999999998 89999999999999999999999999998764321 11112
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ... .. ..+. ....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~---~~-~~~~---------~~~~ 222 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVE---KV-SQGL---------RLYR 222 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHH---HH-hcCC---------CCCC
Confidence 23345678999999998899999999999999999998 998886433211 111 11 1110 0011
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+......+.+++.+||+.+|.+||++.++++.|+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 1223567899999999999999999999998764
No 73
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=343.14 Aligned_cols=240 Identities=27% Similarity=0.365 Sum_probs=206.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~l 575 (845)
-++|...++||+|.||+|+++.++ +++.+|||.+++. ..++.+..+.|.+++... +||.|++|+..+...+++++
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 457899999999999999999987 6788999987765 355677888899998887 59999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||||+.||++..+.+ ...+++....-++..|+.||+|||+ ++|||||||.+|||||.+|.+||+||||++....
T Consensus 447 vmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEecccccccccCC
Confidence 999999999655543 2469999999999999999999999 9999999999999999999999999999997543
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.......++||+.|||||++.++.|+.++|+|||||+|||||.|..||.+..+.+ +.|.
T Consensus 521 --~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-------------------~Fds 579 (694)
T KOG0694|consen 521 --QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-------------------VFDS 579 (694)
T ss_pred --CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-------------------HHHH
Confidence 2334567999999999999999999999999999999999999999997654332 2333
Q ss_pred ccCC--CCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 736 NLVG--KVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 736 ~l~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
.+.. .++.....+.+.|+.+++.++|++|..+
T Consensus 580 I~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 3322 2456677889999999999999999877
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.4e-38 Score=341.74 Aligned_cols=240 Identities=22% Similarity=0.264 Sum_probs=195.6
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||.||+|+.. +++.+|+|++... .....+.+..|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999976 5788999987542 344556788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.... ........
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~~~~ 153 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK--DDDKTNTF 153 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCcc--CCCccccc
Confidence 9998543 468999999999999999999998 9999999999999999999999999999975322 11223456
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.... +..... .++...
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~---------~~~~~~--~~~~~~ 216 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRK---------ILQEPL--RFPDGF 216 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHH---------HHcCCC--CCCCcC
Confidence 7999999999999999999999999999999999999999643211 11111 111111 123345
Q ss_pred HHHHHHHHHHhhhhCCCCCCC---HHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPS---MGDVLWN 773 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs---~~~vl~~ 773 (845)
...+.+++.+||+.+|++||+ +.+++.+
T Consensus 217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 567889999999999999986 4555443
No 75
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.8e-37 Score=330.52 Aligned_cols=256 Identities=28% Similarity=0.366 Sum_probs=203.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC------CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD------GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
+++|...+.||+|++|.||+|.+.+ +..+++|...... ......|.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678888999999999999998753 5678999876443 44456799999999999999999999999999999
Q ss_pred EEEEEeccCCCccccccCCC-----CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC---ceEEE
Q 003139 574 ILVYEYMANGPLRSHLYGTD-----LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF---VAKVA 645 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~ 645 (845)
++||||+++++|.+++.... ...++|.++++++.||+.||+|||+ .+++||||||+|||++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999886542 1358999999999999999999998 8999999999999998654 69999
Q ss_pred eccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHh
Q 003139 646 DFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQ 724 (845)
Q Consensus 646 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~ 724 (845)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||......+ ...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~------~~~--- 232 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE------VME--- 232 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHH---
Confidence 9999986422111111112233567999999999999999999999999999997 888886433221 111
Q ss_pred hcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 725 KKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+........+...+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 -------FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11111111223445678899999999999999999999999885
No 76
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=351.02 Aligned_cols=261 Identities=23% Similarity=0.304 Sum_probs=215.6
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCC-cEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEE-e---c---CC
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDG-TKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYC-D---E---RS 571 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~-~---~---~~ 571 (845)
..+.++.+.|.+|||+.||.|....+ ..+|+|++...++..++...+|+++|++|+ |||||.+++.. . . .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 35677888999999999999998765 999999988889999999999999999997 99999999933 1 1 24
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
+.+|+||||++|.|-+++.......|++.++++|+.|+++|+.+||. +..+|||||||-+||||+.++..||||||.|.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 78999999999999999976655569999999999999999999998 55789999999999999999999999999986
Q ss_pred CCCCCCCccc-------ccccccCCCcCChhhh---ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH
Q 003139 652 TGPALDQTHV-------STAVKGSFGYLDPEYF---RRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 652 ~~~~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~ 721 (845)
.....-.... .....-|+-|+|||.+ ++..+++|+|||+|||+||-|+....||+....
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----------- 263 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----------- 263 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-----------
Confidence 4322111110 0122358899999976 578999999999999999999999999975421
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
..|++....-...+.....|..||..||+.+|++||++-+|+..+-.++..+
T Consensus 264 --------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 --------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred --------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 1233333333334678899999999999999999999999999988876543
No 77
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.6e-37 Score=335.51 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=196.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc--CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhC---CCCCcceEEEEEe-----c
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD--DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKL---RHRHLVSLIGYCD-----E 569 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~-----~ 569 (845)
++|+..+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|+++++++ +||||++++++|. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 46789999765432 22234566777777665 6999999999985 3
Q ss_pred CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 570 RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 570 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
....++||||++ ++|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999996 689888866555568999999999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC--
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG-- 727 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-- 727 (845)
++.... ........|++.|+|||.+.+..++.++|||||||++|||++|++||......+.. ..........
T Consensus 157 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~---~~i~~~~~~~~~ 230 (290)
T cd07862 157 ARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL---GKILDVIGLPGE 230 (290)
T ss_pred eEeccC---CcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH---HHHHHHhCCCCh
Confidence 976332 12234556899999999999999999999999999999999999999765432211 1111100000
Q ss_pred -c-------hhhhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 728 -M-------LDQIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 728 -~-------~~~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
. .......... ....+.....+.+++.+||+.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 0000000000 0011234466789999999999999999999985
No 78
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.2e-37 Score=342.01 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=197.7
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
+.||+|+||.||+++.. +|+.||+|.+... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999865 6899999987643 2344567888999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVST 663 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 663 (845)
+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~--~~~~~~ 153 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMK 153 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccC--CCCccc
Confidence 998888543 468999999999999999999998 8999999999999999999999999999875322 111223
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
...||+.|+|||++.++.++.++|||||||++|||++|+.||......+. ...+..... .++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---------------~~~~~~~~~--~~p~ 216 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---------------FELILMEEI--RFPR 216 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH---------------HHHHhcCCC--CCCC
Confidence 45789999999999999999999999999999999999999864332110 001111111 1233
Q ss_pred HHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 744 ASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.....+.+++.+||+.+|++|| ++.+++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 217 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 4456788999999999999998 88888764
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=8.9e-37 Score=326.33 Aligned_cols=254 Identities=29% Similarity=0.401 Sum_probs=198.9
Q ss_pred CcceeeeeeceEEEEEEEEcC-Cc--EEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------CcE
Q 003139 505 DESLLLGVGGFGRVYKGTLDD-GT--KVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------SEM 573 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~~-g~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~ 573 (845)
.+.+.||+|+||.||+|.+.+ ++ .+|+|..... +....+.|.+|++++++++|+||++++++|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999764 33 5899977643 455577899999999999999999999988432 256
Q ss_pred EEEEEeccCCCccccccCC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 574 ILVYEYMANGPLRSHLYGT----DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
++++||+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999998877421 23458999999999999999999998 8999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCc
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGM 728 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (845)
++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .. ....++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~-~~~~~~~ 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE------IY-DYLRQGN 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH------HH-HHHHcCC
Confidence 986433221111223345678999999999999999999999999999999 788875432211 11 1111111
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 729 LDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
. ...+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 232 ~---------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 R---------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 012234456789999999999999999999999999875
No 80
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.5e-37 Score=324.17 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=197.9
Q ss_pred eeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCcc
Q 003139 509 LLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
.||+|+||.||+|+.. +++.+|+|..... .......|.+|++++++++||||++++++|......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 6899999999999875 6889999986543 3445678999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccc
Q 003139 587 SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVK 666 (845)
Q Consensus 587 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 666 (845)
+++... ...+++.+++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++...............
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 82 TFLRTE-GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 998643 3468999999999999999999998 899999999999999999999999999987533211111111112
Q ss_pred cCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 667 GSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 667 gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.+..|+|||.+.++.++.++||||||+++|||++ |..|+....... ... .++.......+...
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~-------~~~---------~~~~~~~~~~~~~~ 221 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ-------TRE---------AIEQGVRLPCPELC 221 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH-------HHH---------HHHcCCCCCCcccC
Confidence 3457999999999999999999999999999998 888775432211 011 11111111223344
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+..+.+++.+|++.+|++||++.+++++|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 567899999999999999999999999875
No 81
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.3e-37 Score=326.01 Aligned_cols=253 Identities=28% Similarity=0.407 Sum_probs=204.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|++.+.||+|+||.||+|...++..+|+|.+..... ..++|.+|+.++++++|+|++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 35777889999999999999988888899998775433 2467899999999999999999999885 456899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.+.....+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++....... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~-~~~ 159 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE-YTA 159 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcc-ccc
Confidence 9999999976555678999999999999999999999 899999999999999999999999999997643211 111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . ..... ......
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~---~~~~~----------~~~~~~ 223 (260)
T cd05070 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---V---LEQVE----------RGYRMP 223 (260)
T ss_pred ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---H---HHHHH----------cCCCCC
Confidence 122345678999999998999999999999999999999 888886432211 1 11111 111112
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+...+..+.+++.+|++.+|.+|||+.++.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 233455679999999999999999999999998874
No 82
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.6e-37 Score=334.39 Aligned_cols=261 Identities=27% Similarity=0.422 Sum_probs=207.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc--------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD--------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 571 (845)
++|.+.+.||+|+||.||+++.. .+..+|+|.+... ......++..|+++++++ +||||++++++|.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46888899999999999999753 2346999988754 344567788999999999 7999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 572 EMILVYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
..++||||+++|+|.+++.... ...++|.++++++.|++.||+|||+ .+++||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence 9999999999999999986432 1358999999999999999999998 8999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccH
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNI 716 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l 716 (845)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------ 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------
Confidence 999999999999876432221111222334568999999999999999999999999999998 7788754321
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
.+..... .. ......+......+.+++.+|++.+|.+||++.+|++.|+.+++..
T Consensus 249 ~~~~~~~-~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 249 EELFKLL-KE---------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHH-Hc---------CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111 11 1111223345568889999999999999999999999999987653
No 83
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.2e-37 Score=333.52 Aligned_cols=262 Identities=26% Similarity=0.433 Sum_probs=209.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc--------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD--------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 571 (845)
.+|.+.+.||+|+||.||+|+.. ++..+++|..... .....+++.+|+.+++.+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 46777889999999999999742 2457899987643 345567899999999999 8999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 572 EMILVYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
..++||||+++|+|.+++.... ...++|.+++.++.|+++||+|||+ ++++||||||+|||++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEc
Confidence 9999999999999999986431 2358899999999999999999998 8999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccH
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNI 716 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l 716 (845)
+++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..|+.....
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~------ 245 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV------ 245 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH------
Confidence 999999999999986543222222233445678999999999999999999999999999998 7777754321
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
.++.... ..+. ....+..++..+.+++.+||+.+|.+||++.++++.|+.++.+..
T Consensus 246 ~~~~~~~-~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 246 EELFKLL-KEGH---------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred HHHHHHH-HcCC---------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence 1121111 1110 111223456778899999999999999999999999999877644
No 84
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.8e-37 Score=341.40 Aligned_cols=242 Identities=25% Similarity=0.321 Sum_probs=198.3
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
+.||+|+||.||++... +|+.+|+|++... ......++.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999865 6889999987643 2345567889999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVST 663 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 663 (845)
+|..++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~--~~~~~~ 153 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGIT--DAATMK 153 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCC--cccccc
Confidence 998888543 468999999999999999999998 9999999999999999999999999999875322 111223
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +.... ..++.
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~------~~~~---------~~~~~--~~~p~ 216 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK------LFEL---------ILMED--IKFPR 216 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH------HHHH---------hccCC--ccCCC
Confidence 4579999999999999999999999999999999999999996532211 1111 00000 11233
Q ss_pred HHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 744 ASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.....+.+++.+||+.+|++|| ++.+++++
T Consensus 217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 4456788999999999999997 89998865
No 85
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=8e-37 Score=328.36 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=209.0
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC-----CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD-----GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE-RSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~-----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~ 573 (845)
.++|...++||+|+||.||+|.+.+ +..|++|++... .....+.+.+|+.++++++|+||+++++++.+ ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4578888899999999999999765 678999987654 34556788999999999999999999999866 5678
Q ss_pred EEEEEeccCCCccccccCCCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 574 ILVYEYMANGPLRSHLYGTDL------PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
++++||+++++|.+++..... ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999865322 468999999999999999999998 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
|+++...............++..|+|||++.+..++.++||||||+++||+++ |+.||....+.+ +..+. ...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~---~~~ 235 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYL---KDG 235 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHH---HcC
Confidence 99986433222222233456778999999999999999999999999999999 999986543211 11111 111
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
. .......++..+.+++.+||+.+|++||++.++++.|+.+.+
T Consensus 236 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 Y----------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred C----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0 001122345678899999999999999999999999998754
No 86
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=327.81 Aligned_cols=272 Identities=22% Similarity=0.285 Sum_probs=211.3
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcC--CCChHhHHHHHHHHHHHHhCCCCCcceEEEEEec----
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGN--PRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE---- 569 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~---- 569 (845)
..+....|...+.||+|+||.|+++... +|+.||||++. -.+....++-.+|+++|+.++|+||+.+.+.+..
T Consensus 17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 3344556666778999999999999865 78999999987 3455667888999999999999999999998854
Q ss_pred -CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 570 -RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 570 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
-+..|+|+|+| ..+|.+.++.. ..|+......++.|+++||.|+|+ .+|+||||||+|+|++.+...||+|||
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEecccc
Confidence 45789999999 56888888543 359999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH------
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFR-RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM------ 721 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~------ 721 (845)
+||...........+..+.|..|+|||.+. ...||.+.||||.|||+.||++|++.|.+....++..+..-..
T Consensus 171 LAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 171 LARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred ceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 999865432334446778899999999764 5789999999999999999999999998766555543322111
Q ss_pred --HHhhcCchhhhhccccC-C-----CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 722 --TWQKKGMLDQIMDSNLV-G-----KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 722 --~~~~~~~~~~~~d~~l~-~-----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
...........+..... . ..-+......++++.+||..||.+|+|++|.+++-
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 11111111111111110 0 01123445677999999999999999999988763
No 87
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.6e-37 Score=333.87 Aligned_cols=262 Identities=21% Similarity=0.299 Sum_probs=199.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|...+.||+|+||.||+|..+ +++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999876 68899999876432 22345678999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ ++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..... .
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~--~ 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP--T 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC--C
Confidence 97 48888875432 357899999999999999999998 99999999999999999999999999999753321 1
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc------------
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK------------ 726 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------ 726 (845)
.......+++.|+|||.+.+ ..++.++||||+||++|||++|++||......+.... .......
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 158 KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHL---IFRLLGTPTEETWPGITSN 234 (288)
T ss_pred ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHhCCCChHHhhccccc
Confidence 12234567899999998875 5689999999999999999999999976543322111 1111000
Q ss_pred CchhhhhccccCCC----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 727 GMLDQIMDSNLVGK----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 727 ~~~~~~~d~~l~~~----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
........+..... ..+.....+.+++.+||+.||.+|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000010110000 011234567899999999999999999999753
No 88
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.1e-37 Score=330.57 Aligned_cols=265 Identities=26% Similarity=0.401 Sum_probs=205.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-----CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-----DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEMI 574 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 574 (845)
+.|+..+.||+|+||.||++..+ ++..|++|++........+.|.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46778889999999999999743 578899999887777777889999999999999999999998754 34689
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+|+||+++++|.+++... ...++|..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999999998643 2468999999999999999999998 899999999999999999999999999998654
Q ss_pred CCCCccc-ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC------
Q 003139 655 ALDQTHV-STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG------ 727 (845)
Q Consensus 655 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~------ 727 (845)
....... .....++..|+|||.+.+..++.++|||||||+++||++|..++...... +........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 232 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-------FMRMMGNDKQGQMIV 232 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-------hhhhcccccccccch
Confidence 3221111 11222345699999999999999999999999999999988765322110 000000000
Q ss_pred -chhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 728 -MLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 728 -~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.+.+.+........+...+..+.+++.+||+.+|++|||+.+|++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 01111111111112334567799999999999999999999999999864
No 89
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=308.26 Aligned_cols=264 Identities=23% Similarity=0.316 Sum_probs=212.6
Q ss_pred hcCCCcceeeeeeceEEEEEEE-EcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----CcEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGT-LDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER-----SEMI 574 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~ 574 (845)
.++|.+.+.||+|||+-||+++ ..++..+|+|++...+.++.+..++|++.-++++|||++++++++..+ .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4678999999999999999998 457889999999888888889999999999999999999999887433 3589
Q ss_pred EEEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 575 LVYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
|+++|...|+|.+.+... +...+++.+.++|+.+|++||++||+.. .++.||||||.|||+.+.+.++|.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999988643 3447999999999999999999999832 4699999999999999999999999999875
Q ss_pred CCCCCCc-------ccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH
Q 003139 653 GPALDQT-------HVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT 722 (845)
Q Consensus 653 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~ 722 (845)
.+-.-.. +.......|..|+|||.+. +...++++|||||||+||+|+.|..||+......+.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS-------- 250 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS-------- 250 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe--------
Confidence 3321111 1112346789999999885 557899999999999999999999999765442211
Q ss_pred HhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 723 WQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
....+....+...-.....+.+.+++.+|++.||.+||++.+++..++.+.
T Consensus 251 -----laLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 251 -----LALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred -----EEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 011111222222222336788999999999999999999999999988753
No 90
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.4e-37 Score=325.23 Aligned_cols=250 Identities=28% Similarity=0.398 Sum_probs=201.3
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+|++.+.||+|+||.||+|.++++..+|+|....... ..++|.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4677789999999999999988777899998764322 335788999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
++|.+++.... ..++|..+++++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++..... .....
T Consensus 84 ~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~-~~~~~ 158 (256)
T cd05059 84 GCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD-QYTSS 158 (256)
T ss_pred CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccc-ccccc
Confidence 99999986543 368999999999999999999999 89999999999999999999999999999764321 11111
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ . ... ... ......
T Consensus 159 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~---~~~-~~~---------~~~~~~ 222 (256)
T cd05059 159 QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---V---VES-VSA---------GYRLYR 222 (256)
T ss_pred CCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---H---HHH-HHc---------CCcCCC
Confidence 12234567999999999999999999999999999999 788886432211 1 111 111 111112
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 234567899999999999999999999999876
No 91
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.7e-37 Score=338.87 Aligned_cols=263 Identities=22% Similarity=0.303 Sum_probs=204.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||+|+||.||++... ++..+|+|.+... .....+++.+|++++++++||||++++++|.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 67888999999999999999976 6788999987654 334456789999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++|+|.+++... ..+++..+..++.|++.||.|||+ ..+|+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~---- 156 (333)
T cd06650 85 MDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 156 (333)
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh----
Confidence 9999999998643 468899999999999999999997 24799999999999999999999999999875322
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc-------------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK------------- 726 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------- 726 (845)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||......+.. .........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 157 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE---LMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH---HHhcCcccCCccccccCcccCC
Confidence 1123456899999999999999999999999999999999999998653321110 000000000
Q ss_pred ---------------CchhhhhccccCCC---C-CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 727 ---------------GMLDQIMDSNLVGK---V-NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 727 ---------------~~~~~~~d~~l~~~---~-~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.....+.+...... . .......+.+++.+||+.||++||++.|++++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 00000111000000 0 0123456889999999999999999999987643
No 92
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=6.3e-37 Score=344.51 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=205.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~ 573 (845)
++|...+.||+|+||.||+|++. .+..||+|++.... ....+.+.+|+++|.++. ||||++++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45667789999999999999864 23579999987542 333457899999999997 99999999999999999
Q ss_pred EEEEEeccCCCccccccCCC------------------------------------------------------------
Q 003139 574 ILVYEYMANGPLRSHLYGTD------------------------------------------------------------ 593 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 593 (845)
++|+||+++|+|.++++...
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 99999999999998885421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 594 ------------------------------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 594 ------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
...++|..+++++.|++.||+|||+ .+++||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEe
Confidence 1247888899999999999999998 8999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccH
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNI 716 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l 716 (845)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||......+.
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--- 350 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--- 350 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH---
Confidence 999999999999976332111111223456788999999999999999999999999999998 8888754322111
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
.......+ .....+......+.+++.+||+.+|.+||++++|++.|+.++
T Consensus 351 ---~~~~~~~~---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 ---FYNAIKRG---------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ---HHHHHHcC---------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 11111111 111123344578899999999999999999999999999864
No 93
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.1e-37 Score=324.82 Aligned_cols=254 Identities=29% Similarity=0.434 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|++.+.||+|+||.||+|++.+...+++|+...... ..++|.+|++++++++|+||+++++.+.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 46888899999999999999987777899998875332 34678999999999999999999998754 56899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+|+|.+++.......+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++....... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~~ 159 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TA 159 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeecccccc-cc
Confidence 9999999976544568999999999999999999998 8999999999999999999999999999976432111 11
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||......+. ......+ ....
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-------~~~~~~~---------~~~~ 223 (262)
T cd05071 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-------LDQVERG---------YRMP 223 (262)
T ss_pred ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-------HHHHhcC---------CCCC
Confidence 223446678999999999999999999999999999999 7778754332110 0111110 0111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+..+.+++.+|++.+|++||++.++++.|+..
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 2344567889999999999999999999999999875
No 94
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4e-37 Score=342.32 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
|+..+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 445668999999999999875 6899999987644 33445678999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+|+|.... .+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 156 ~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~ 224 (353)
T PLN00034 156 GGSLEGTH------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT--MDP 224 (353)
T ss_pred CCcccccc------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceecccc--ccc
Confidence 99987543 35677888999999999999998 89999999999999999999999999999764321 111
Q ss_pred ccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 662 STAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.....||..|+|||.+.. ...+.++|||||||++|||++|+.||......+ |...... +. ..
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~~~~~------~~-~~ 291 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------WASLMCA------IC-MS 291 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHH------Hh-cc
Confidence 234578999999998743 234569999999999999999999997322211 1111100 00 00
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.....+......+.+++.+||+.+|++||++.|++++-
T Consensus 292 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 292 QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 01112234556789999999999999999999998763
No 95
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-38 Score=333.45 Aligned_cols=248 Identities=26% Similarity=0.394 Sum_probs=208.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.|....+||+|.||.||||... .++.||+|.+... .+...++..+|+.++.+++|+||.+.+|.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4556678999999999999865 6888999998765 4556788999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
.+|++.+.|... ..+++..+.-|+++++.||.|||. ++.+|||||+.|||+..+|.+||+|||++-.... ...
T Consensus 94 ~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~--~~~ 166 (467)
T KOG0201|consen 94 GGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTN--TVK 166 (467)
T ss_pred cCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeec--hhh
Confidence 999999999543 345888888999999999999999 9999999999999999999999999999976443 222
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
....++||+.|||||+++...|+.|+||||||++.+||.+|.+|+....+..-.- .+.+-.-|.+.+
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf------------lIpk~~PP~L~~- 233 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF------------LIPKSAPPRLDG- 233 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE------------eccCCCCCcccc-
Confidence 2367899999999999998899999999999999999999999997766532211 111111223322
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....+.+++..||.++|+.||++.+++++
T Consensus 234 ---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 234 ---DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ---ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 455678999999999999999999998865
No 96
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.9e-37 Score=331.18 Aligned_cols=258 Identities=26% Similarity=0.418 Sum_probs=205.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc--EEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT--KVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..+.||+|+||.||+|... ++. .+++|.+... .....+.|.+|++++.++ +||||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46788889999999999999875 333 4688877643 344567899999999999 799999999999999999999
Q ss_pred EEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 577 YEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
+||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 99999999999885421 1358899999999999999999998 999999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~ 721 (845)
||+|||++..... .........+..|+|||++.+..++.++|||||||++|||++ |+.||......+ ...
T Consensus 159 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~------~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE------LYE 229 (297)
T ss_pred EECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHH
Confidence 9999999864221 111111223557999999999999999999999999999997 999986543221 111
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
.. ........+......+.+++.+||+.+|.+||++.++++.|+.+++..
T Consensus 230 ~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 KL----------PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HH----------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 11 111111223345567889999999999999999999999999887644
No 97
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=9.5e-37 Score=326.00 Aligned_cols=255 Identities=29% Similarity=0.408 Sum_probs=202.0
Q ss_pred CCcceeeeeeceEEEEEEEEcC----CcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc-----
Q 003139 504 FDESLLLGVGGFGRVYKGTLDD----GTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE----- 572 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~----- 572 (845)
|++.+.||+|+||.||+|.+.. +..+|+|++... .....+++.+|++.++.++||||+++++++.+.+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567789999999999998652 367999987643 34556789999999999999999999999866554
Q ss_pred -EEEEEEeccCCCccccccCC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 573 -MILVYEYMANGPLRSHLYGT----DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 573 -~~lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
.++|+||+++|+|..++... ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 79999999999999887432 23468999999999999999999998 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
|+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||......+ +.++. ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~~~~----~~ 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IYDYL----RH 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----Hc
Confidence 99986433222111222335678999999999999999999999999999999 888875432211 11111 11
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.. ....+......+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 231 --------~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 --------GN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --------CC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1112334567889999999999999999999999999875
No 98
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=323.84 Aligned_cols=264 Identities=24% Similarity=0.396 Sum_probs=201.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHH--hCCCCCcceEEEEEecC----CcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLS--KLRHRHLVSLIGYCDER----SEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~g~~~~~----~~~~l 575 (845)
++....+.||+|.||+||+|.++ |+.||||++...++. .+.+|.++.+ .|+|+||+.+++.-..+ .+++|
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL 286 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL 286 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence 45566778999999999999998 899999999876654 3445555554 57999999999886433 37899
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTG-----AAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
|.+|.++|||.++|.. ..++-...++++..+|.||++||-+ ..+.|.|||||+.|||+.+++.+.|+|+|||
T Consensus 287 vTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 287 VTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred eeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999999999999954 4689999999999999999999952 4577999999999999999999999999999
Q ss_pred CCCCCCCC--cccccccccCCCcCChhhhccC----CC--CchhHHHHHHHHHHHHHcC----------CCCCCCCCCcc
Q 003139 651 KTGPALDQ--THVSTAVKGSFGYLDPEYFRRQ----QL--TEKSDVYSFGVVLMEVLCT----------RPALNPVLPRE 712 (845)
Q Consensus 651 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~----~~--s~ksDV~S~Gvvl~Elltg----------~~p~~~~~~~~ 712 (845)
-....... .......+||.+|||||++... .+ -..+||||||+|+||+... +.||.+..+.+
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 76433211 2234467899999999998653 22 2469999999999999753 25555443332
Q ss_pred cccHHHHHHHHhhcCchhhhhccccCCCC-----CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 713 QVNIAEWAMTWQKKGMLDQIMDSNLVGKV-----NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
.. . +++.+-+...++...+ ..+.+..+.++++.||..+|.-|.|+-.+-+.|.++.+.++
T Consensus 444 Ps-~---------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~e 508 (513)
T KOG2052|consen 444 PS-F---------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDE 508 (513)
T ss_pred CC-H---------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChh
Confidence 11 1 0111122223333332 24578889999999999999999999999999888765443
No 99
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=342.86 Aligned_cols=245 Identities=22% Similarity=0.308 Sum_probs=200.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC--CcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD--GTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~--g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..+.||+|+||.||+|.+++ +..+|+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468888999999999999998653 367999987532 233456788999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 9999999999998644 468999999999999999999999 9999999999999999999999999999976322
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....+.. .. ..+.+..
T Consensus 184 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-------~~--------~~i~~~~ 244 (340)
T PTZ00426 184 ----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL-------IY--------QKILEGI 244 (340)
T ss_pred ----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH-------HH--------HHHhcCC
Confidence 1234578999999999999999999999999999999999999997533211 01 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
. .++......+.+++.+|++.+|++|+ ++++++++
T Consensus 245 ~--~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 I--YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred C--CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1 12333445678999999999999995 78887765
No 100
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.5e-37 Score=340.55 Aligned_cols=262 Identities=23% Similarity=0.303 Sum_probs=197.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----CcEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER-----SEMI 574 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~ 574 (845)
+|+..+.||+|+||.||+|+.. +|+.||+|++... ......++.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778889999999999999865 6899999987642 233446788999999999999999999988543 2479
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+||||++ ++|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 6888887543 468999999999999999999999 899999999999999999999999999997532
Q ss_pred CCCC-cccccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh------
Q 003139 655 ALDQ-THVSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK------ 725 (845)
Q Consensus 655 ~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~------ 725 (845)
.... ........||..|+|||++.+ ..++.++|||||||++|||++|++||......... .+......
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~---~~~~~~~~~~~~~~ 231 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQL---DLITDLLGTPSPET 231 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHH---HHHHHHhCCCCHHH
Confidence 2111 112234578999999999876 68899999999999999999999999654322211 11111000
Q ss_pred -----cCchhhhhcc---ccCCC---CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 726 -----KGMLDQIMDS---NLVGK---VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 726 -----~~~~~~~~d~---~l~~~---~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....+.++. ..... ..+.....+.+++.+||+.+|++||+++|++++
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0001111110 00000 001234567899999999999999999999876
No 101
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.4e-37 Score=355.28 Aligned_cols=256 Identities=26% Similarity=0.330 Sum_probs=206.5
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS---- 571 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~---- 571 (845)
...++|.+.+.||+|+||.||+|+.. +|+.||||++... +......+.+|+.++..++|+|++++.+.+....
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34568999999999999999999864 7899999987543 4556678899999999999999999987764322
Q ss_pred ----cEEEEEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEE
Q 003139 572 ----EMILVYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVA 645 (845)
Q Consensus 572 ----~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 645 (845)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||||++++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCCEEEE
Confidence 368999999999999988643 23578999999999999999999999 999999999999999999999999
Q ss_pred eccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh
Q 003139 646 DFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK 725 (845)
Q Consensus 646 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~ 725 (845)
|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~------~~~~~~~-- 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM------EEVMHKT-- 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH------HHHHHHH--
Confidence 99999864432222333456799999999999999999999999999999999999999964321 1111111
Q ss_pred cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 726 KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+... ....+......+.+++.+||+.+|.+||++.+++.+
T Consensus 258 -------~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 258 -------LAGR-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -------hcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 111334456778999999999999999999999864
No 102
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.4e-37 Score=329.66 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=202.9
Q ss_pred CCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
|+..+.||+|+||.||+|... .++.||+|++..... ...+.|.+|+.++.+++||||+++++++.+.+..+++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~ 86 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMI 86 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEE
Confidence 555668999999999999864 246799999875543 3356788999999999999999999999999999999
Q ss_pred EEeccCCCccccccCC--------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 577 YEYMANGPLRSHLYGT--------------DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
+||+++++|.+++... ....+++..+++++.|++.||+|||+ ++|+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05091 87 FSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNV 163 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCce
Confidence 9999999999887421 12358899999999999999999998 899999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~ 721 (845)
||+|||+++...............+++.|+|||.+.++.++.++|||||||++|||++ |..|+...... ++..
T Consensus 164 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~~~~ 237 (283)
T cd05091 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVIE 237 (283)
T ss_pred EecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHH
Confidence 9999999886433222222234456789999999998899999999999999999998 77777543221 1111
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
. +.+.. ....+.+++..+.+++.+|++.+|++||++.+|+..|+.
T Consensus 238 ~---------i~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 M---------IRNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H---------HHcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 11111 112234566778999999999999999999999998863
No 103
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.7e-36 Score=338.58 Aligned_cols=203 Identities=22% Similarity=0.371 Sum_probs=175.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||++... +++.+|+|++.... ......+..|++++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36888999999999999999865 58899999876432 234467888999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999998643 478999999999999999999998 999999999999999999999999999987532111
Q ss_pred C---------------------------------cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCC
Q 003139 658 Q---------------------------------THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPA 704 (845)
Q Consensus 658 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p 704 (845)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 0011235799999999999999999999999999999999999999
Q ss_pred CCCCC
Q 003139 705 LNPVL 709 (845)
Q Consensus 705 ~~~~~ 709 (845)
|....
T Consensus 236 f~~~~ 240 (363)
T cd05628 236 FCSET 240 (363)
T ss_pred CCCCC
Confidence 97543
No 104
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-36 Score=323.87 Aligned_cols=256 Identities=26% Similarity=0.424 Sum_probs=205.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc---EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT---KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..+.||+|+||.||+|+.. +++ .+++|+.... .....+++.+|++++++++|+|++++.+++.+.+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46778889999999999999875 333 6899987655 344567899999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 85 TEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999986543 578999999999999999999998 89999999999999999999999999999764322
Q ss_pred CCcc-cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 657 DQTH-VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 657 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.... .......+..|+|||++..+.++.++|||||||++|||++ |+.||...... ++..... .+
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i~-~~------- 226 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAIN-DG------- 226 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHHh-cC-------
Confidence 1111 1112233567999999999999999999999999999997 99998643321 1111111 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.........+..+.+++.+|++.+|++||++.+|++.|+++
T Consensus 227 --~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 --FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11111223456789999999999999999999999999875
No 105
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.5e-37 Score=324.06 Aligned_cols=253 Identities=26% Similarity=0.385 Sum_probs=206.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
+.|+..+.||+|+||.||+|..++++.+|+|.+..... ..++|.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 46788889999999999999988899999998765432 3467899999999999999999999874 467899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++.+++.++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++..... ....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-~~~~ 159 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDN-EYTA 159 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCC-Cccc
Confidence 9999999876655679999999999999999999998 89999999999999999999999999999764321 1111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||++....++.++||||||++++||++ |+.||......+ ..... .. .....
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~-~~---------~~~~~ 223 (260)
T cd05067 160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE------VIQNL-ER---------GYRMP 223 (260)
T ss_pred ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH------HHHHH-Hc---------CCCCC
Confidence 223445678999999999999999999999999999999 999986543211 11111 11 11111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+...+..+.+++.+|+..+|++||++++++..|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 223345679999999999999999999999998874
No 106
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.7e-36 Score=323.19 Aligned_cols=258 Identities=20% Similarity=0.297 Sum_probs=208.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|++.+.||+|+||.||+|+.. +++.+|+|.+.. .......++.+|+++++.++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999965 688999997643 23445567899999999999999999999999999999999
Q ss_pred EeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||+++++|.+++... ....+++..++.++.|+++||+|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999887532 23468899999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.. .......++..|+|||.+.+..++.++|+||||+++|||++|+.|+..... ...++.......
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~--------- 223 (267)
T cd08228 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQC--------- 223 (267)
T ss_pred hh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcC---------
Confidence 11 112235688899999999998999999999999999999999999854321 111222111110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.............+.+++.+||+.+|++||++.+|++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 011111234557789999999999999999999999999875
No 107
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.6e-36 Score=325.91 Aligned_cols=259 Identities=24% Similarity=0.349 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
.+|+..+.||+|+||.||+|++. +|+ .||+|..... .....+++.+|+.+++.++|+||++++++|.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 46778889999999999999854 444 4799987654 34456788999999999999999999999975 45789
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
++||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999986543 468999999999999999999998 9999999999999999999999999999986443
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||.+.+..++.++|||||||++|||++ |..||...... .+..+.. .+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~------- 227 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLLE----KG------- 227 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CC-------
Confidence 222111222345678999999999999999999999999999998 88888643221 1111111 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
.....+......+.+++.+||+.+|++||++.++++.|+.+.+.+
T Consensus 228 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 228 --ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred --CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111122334567889999999999999999999999988775543
No 108
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.3e-36 Score=321.73 Aligned_cols=250 Identities=26% Similarity=0.366 Sum_probs=206.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|...+.||+|++|.||+|... +++.+++|.+... .....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 3677789999999999999975 6889999986533 455667899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.......+++.++.+++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++..... .
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~--~ 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN--T 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc--c
Confidence 999999999976545679999999999999999999998 89999999999999999999999999998764321 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......|++.|+|||++.+..++.++||||||++++||++|+.||......+ .......+. ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~---------~~ 219 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA-------LILKIIRGV---------FP 219 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHcCC---------CC
Confidence 12234567889999999999999999999999999999999999986443111 111111111 11
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+......+.+++.+||+.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1223455678999999999999999999999864
No 109
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.1e-36 Score=327.54 Aligned_cols=255 Identities=28% Similarity=0.420 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
.+|...+.||+|+||.||++... ++..+++|..........+.|.+|++++++++|+||+++++++.+....++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 35666778999999999999742 356789998887777777899999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 576 VYEYMANGPLRSHLYGTD-------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 999999999999886432 1358999999999999999999998 999999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~ 721 (845)
||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |++||......+. ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA------IE 235 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH------HH
Confidence 9999999875432221122223345678999999999999999999999999999998 8888854322211 11
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
. +... .....+..++..+.+++.+||+.+|.+||++.+|++.|+
T Consensus 236 ~---------~~~~-~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 C---------ITQG-RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred H---------HHcC-ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1 1110 001122334567889999999999999999999998876
No 110
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.1e-36 Score=321.48 Aligned_cols=253 Identities=30% Similarity=0.434 Sum_probs=203.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|.....||+|++|.||+|.+.++..+++|+..... ...+.+.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 3477788999999999999998877789999876443 23467889999999999999999999885 456899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......++|..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++...... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~-~~~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE-YTA 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCc-ccc
Confidence 9999999976555568999999999999999999998 899999999999999999999999999997643211 111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ...+ ...+ ....
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~----~~~~---------~~~~ 223 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQ----VERG---------YRMP 223 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHcC---------CCCC
Confidence 223346678999999999999999999999999999999 888886533211 1111 1111 0111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+...+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 233456788999999999999999999999999874
No 111
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-36 Score=320.92 Aligned_cols=249 Identities=28% Similarity=0.467 Sum_probs=206.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|+..+.||+|+||.||+|... |+.+++|....... ..+++.+|+.++++++|+||+++++++.+....++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 46778889999999999999876 78999999876544 56789999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++..+..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~----- 155 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG----- 155 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccc-----
Confidence 9999999876555579999999999999999999998 99999999999999999999999999999864221
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......+..|+|||++..+.++.++||||||++++||++ |+.||......+ + ......+ ....
T Consensus 156 ~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~----~~~~~~~---------~~~~ 219 (256)
T cd05039 156 QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---V----VPHVEKG---------YRME 219 (256)
T ss_pred cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---H----HHHHhcC---------CCCC
Confidence 112334668999999998899999999999999999997 988885432111 1 1111111 1111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+...+..+.+++.+||..+|++||++.+++++|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 223445778899999999999999999999999874
No 112
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-36 Score=327.87 Aligned_cols=267 Identities=25% Similarity=0.360 Sum_probs=204.7
Q ss_pred CcceeeeeeceEEEEEEEE-----cCCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTL-----DDGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILV 576 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 576 (845)
...+.||+|+||.||++.. .+++.+|+|...... ....+.|.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7778999999999988653 357789999876543 34457789999999999999999999998653 458899
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|.+++... .+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 87 MEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred ecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 9999999999998543 58999999999999999999998 89999999999999999999999999999864432
Q ss_pred CCc-ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQT-HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
... .......++..|+|||.+.+..++.++||||||++++||++|+.|+....... .....+.........+.+.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 239 (283)
T cd05080 161 HEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKF-EEMIGPKQGQMTVVRLIELLER 239 (283)
T ss_pred chhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchh-hhhhcccccccchhhhhhhhhc
Confidence 111 11122345667999999998999999999999999999999999875432110 0111111000011112222222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
......+...+..+.+++.+||+.+|++||+++++++.|+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2222234455678999999999999999999999999998763
No 113
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.7e-36 Score=327.53 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=204.9
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE 572 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 572 (845)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .....++.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567889999999999999999754 24479999876443 3344578899999999999999999999999999
Q ss_pred EEEEEEeccCCCccccccCCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEE
Q 003139 573 MILVYEYMANGPLRSHLYGTD--------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKV 644 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl 644 (845)
.++||||+++|+|.+++.... ...+++..+++++.|++.||.|||+ ++|+||||||+|||+++++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999986421 2456788899999999999999998 99999999999999999999999
Q ss_pred EeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHH
Q 003139 645 ADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTW 723 (845)
Q Consensus 645 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~ 723 (845)
+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||...... ++..
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~~~~-- 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------QVLK-- 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHH--
Confidence 99999986433222222222345678999999999999999999999999999998 67777543221 1111
Q ss_pred hhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 724 QKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.+.+... ...+...+..+.+++.+|++.+|++||++.++++.|+..
T Consensus 233 -------~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 -------FVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -------HHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1111111 112233456899999999999999999999999988875
No 114
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.6e-36 Score=330.30 Aligned_cols=259 Identities=29% Similarity=0.455 Sum_probs=204.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc--EEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT--KVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..+.||+|+||.||+|.++ ++. .+++|+.... .....+++.+|++++.++ +|+||+++++++.+.+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788889999999999999875 444 4577776543 345567889999999999 899999999999999999999
Q ss_pred EEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 577 YEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
|||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 99999999999886432 2358899999999999999999998 999999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~ 721 (845)
||+|||+++.... ........++..|+|||++.+..++.++|||||||+++||++ |..||......+ ...
T Consensus 164 kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~ 234 (303)
T cd05088 164 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYE 234 (303)
T ss_pred EeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH------HHH
Confidence 9999999864211 111112234567999999998889999999999999999998 999886433211 111
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
.. .. ......+...+..+.+++.+|++.+|++||++.+++++|+.+++...
T Consensus 235 ~~-~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 235 KL-PQ---------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred HH-hc---------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 11 10 01111122344578899999999999999999999999998766544
No 115
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.8e-37 Score=330.50 Aligned_cols=262 Identities=24% Similarity=0.388 Sum_probs=202.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC---------------CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD---------------GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIG 565 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~---------------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g 565 (845)
++|+..+.||+|+||.||++...+ ...||+|..... .....+.|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888899999999999987542 224899988654 3445567999999999999999999999
Q ss_pred EEecCCcEEEEEEeccCCCccccccCCC----------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEE
Q 003139 566 YCDERSEMILVYEYMANGPLRSHLYGTD----------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNIL 635 (845)
Q Consensus 566 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NIL 635 (845)
++...+..++||||+++++|.+++.... ...++|..++.++.|+++||+|||+ .+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 9999999999999999999999885421 1247899999999999999999998 89999999999999
Q ss_pred ECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc--CCCCCCCCCCccc
Q 003139 636 LDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC--TRPALNPVLPREQ 713 (845)
Q Consensus 636 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt--g~~p~~~~~~~~~ 713 (845)
+++++.+||+|||+++...............++..|+|||.+.++.++.++|||||||+++||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999976432222222233445778999999999999999999999999999998 455665432211
Q ss_pred ccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 714 VNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 714 ~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
............ ........++..+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 241 --~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 --VIENTGEFFRNQ------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred --HHHHHHHhhhhc------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111111111100 000011122334568999999999999999999999999886
No 116
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.4e-37 Score=329.81 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=203.3
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
+|+..++||+|+||.||++... +++.||+|++.... ......+.+|++++++++||||+++++.+.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3777889999999999999865 68899999876432 2233567889999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++|+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~--- 154 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE--- 154 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCC---
Confidence 9999999988865544579999999999999999999999 8999999999999999999999999999876432
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
........|+..|+|||++.+..++.++|||||||++|||++|+.||........ .+........ ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~---~~~~~~~~~~----------~~ 221 (285)
T cd05605 155 GETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK---REEVERRVKE----------DQ 221 (285)
T ss_pred CCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH---HHHHHHHhhh----------cc
Confidence 1112345689999999999999999999999999999999999999975332211 0111110000 01
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
..++......+.+++.+||+.||.+|| ++++++++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 123344566788999999999999999 77787665
No 117
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=2e-37 Score=344.39 Aligned_cols=252 Identities=25% Similarity=0.318 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999976 68999999876431 234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999998654 578999999999999999999999 999999999999999999999999999997643322
Q ss_pred ---------------------------CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Q 003139 658 ---------------------------QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLP 710 (845)
Q Consensus 658 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~ 710 (845)
.........||+.|+|||.+.+..++.++|||||||+||||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 01122345689999999999999999999999999999999999999975432
Q ss_pred cccccHHHHHHHHhhcCchhhhhc--cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC-HHHHHHHH
Q 003139 711 REQVNIAEWAMTWQKKGMLDQIMD--SNLVGKVNPASLKKFGETAEKCLAEHGVDRPS-MGDVLWNL 774 (845)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~~vl~~L 774 (845)
.+. .. .+.. ..+...........+.+++.+|+. +|.+||+ +.+++++.
T Consensus 236 ~~~------~~---------~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 236 QET------YN---------KIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred HHH------HH---------HHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 211 11 1111 111111112245678899999997 9999999 99998763
No 118
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.5e-36 Score=318.62 Aligned_cols=246 Identities=28% Similarity=0.439 Sum_probs=199.7
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
+||+|+||.||+|...+++.+|+|...... ......|.+|++++++++||||++++++|...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 689999999999998888999999877654 3344578999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccccc
Q 003139 588 HLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKG 667 (845)
Q Consensus 588 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g 667 (845)
++.... ..+++.++++++.|++.||.|||+ ++++||||||+||++++++.+||+|||+++..... .........+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~ 156 (250)
T cd05085 82 FLRKKK-DELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG-IYSSSGLKQI 156 (250)
T ss_pred HHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceecccc-ccccCCCCCC
Confidence 886443 468999999999999999999998 89999999999999999999999999998753221 1111112234
Q ss_pred CCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHH
Q 003139 668 SFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASL 746 (845)
Q Consensus 668 t~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 746 (845)
+..|+|||++.+..++.++||||||+++|||++ |..||....... .......+ .....+...+
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~-------~~~~~~~~---------~~~~~~~~~~ 220 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ-------AREQVEKG---------YRMSCPQKCP 220 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH-------HHHHHHcC---------CCCCCCCCCC
Confidence 678999999999999999999999999999998 888886432211 11111111 1112233456
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 747 KKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 747 ~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
..+.+++.+|++.+|++||++.++++.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 78899999999999999999999998874
No 119
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.4e-37 Score=337.75 Aligned_cols=242 Identities=26% Similarity=0.385 Sum_probs=196.5
Q ss_pred eeeeeeceEEEEEEEE----cCCcEEEEEEcCCC----ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 508 LLLGVGGFGRVYKGTL----DDGTKVAVKRGNPR----SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~----~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+.||+|+||.||+++. ..++.+|+|.+... .......+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 25788999987542 223345678899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+.+..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... ..
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~ 154 (323)
T cd05584 82 LSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH--EG 154 (323)
T ss_pred CCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc--CC
Confidence 9999999988543 468889999999999999999999 9999999999999999999999999999875322 12
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... . +..+.....
T Consensus 155 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------~---------~~~~~~~~~-- 217 (323)
T cd05584 155 TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------T---------IDKILKGKL-- 217 (323)
T ss_pred CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------H---------HHHHHcCCC--
Confidence 22334578999999999999999999999999999999999999996533211 1 111111111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.++......+.+++.+||+.+|++|| ++.+++++
T Consensus 218 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 218 NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 23334456788999999999999999 78887664
No 120
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.1e-36 Score=342.39 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=197.7
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.|...+.||+|+||.||+|+.. +++.+|+|++... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788889999999999999865 6789999987643 23445678999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||||+.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 99999999998643 468899999999999999999998 9999999999999999999999999999753210000
Q ss_pred ---------------------------------------------cccccccccCCCcCChhhhccCCCCchhHHHHHHH
Q 003139 659 ---------------------------------------------THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV 693 (845)
Q Consensus 659 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gv 693 (845)
........||+.|+|||.+.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 00112357999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHH--hhhhCCCCCCCHHHHH
Q 003139 694 VLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEK--CLAEHGVDRPSMGDVL 771 (845)
Q Consensus 694 vl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~--cl~~~p~~RPs~~~vl 771 (845)
++|||++|+.||......+.. ...... ...+...........+.+++.+ |+..++..||++.+++
T Consensus 237 il~elltG~~Pf~~~~~~~~~------~~i~~~-------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l 303 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTETQ------LKVINW-------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIK 303 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHHH------HHHHcc-------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence 999999999999754332210 000000 0001000111234556677776 5566777799999998
Q ss_pred HHH
Q 003139 772 WNL 774 (845)
Q Consensus 772 ~~L 774 (845)
.+-
T Consensus 304 ~hp 306 (381)
T cd05626 304 AHP 306 (381)
T ss_pred cCc
Confidence 763
No 121
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.8e-38 Score=338.09 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=214.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc-EEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE-MILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~-~~lV~ 577 (845)
++|...+++|+|+||.++..+++ ++..+++|++... +....+...+|+.++++++|||||.+.+.+.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 45777889999999999999876 5778999976544 44455578899999999999999999999998888 99999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
+|++||+|.+.+...+...++++++.+++.|++.|+.|||+ ..|+|||||+.||+++++..+||+|||+|+......
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999987776789999999999999999999998 999999999999999999999999999999855422
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.......||+.||.||.+.+.+|..|+|||||||++|||++-+++|....... .+ .+++...
T Consensus 161 --~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~------Li---------~ki~~~~- 222 (426)
T KOG0589|consen 161 --SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE------LI---------LKINRGL- 222 (426)
T ss_pred --hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH------HH---------HHHhhcc-
Confidence 24567889999999999999999999999999999999999999997543221 11 1222211
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+......+..++..|++.+|+.||++.+++.+
T Consensus 223 ~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 223455667889999999999999999999999877
No 122
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-36 Score=337.55 Aligned_cols=260 Identities=24% Similarity=0.370 Sum_probs=202.4
Q ss_pred cCCCcceeeeeeceEEEEEEEE------cCCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEec-CCc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL------DDGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDE-RSE 572 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~-~~~ 572 (845)
++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++.++ +|+||++++++|.. +..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4688889999999999999973 246789999886543 34456788999999999 68999999998865 456
Q ss_pred EEEEEEeccCCCccccccCCC-----------------------------------------------------------
Q 003139 573 MILVYEYMANGPLRSHLYGTD----------------------------------------------------------- 593 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------- 593 (845)
.++||||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999998875321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccccc
Q 003139 594 ------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKG 667 (845)
Q Consensus 594 ------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g 667 (845)
...++|.++++++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++...............+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 1247889999999999999999998 9999999999999999999999999999976432211111223345
Q ss_pred CCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHH
Q 003139 668 SFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASL 746 (845)
Q Consensus 668 t~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 746 (845)
+..|+|||.+.+..++.++||||||+++|||++ |..|+......+. ......++.. ...+....
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~ 308 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTR---------MRAPDYTT 308 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH------HHHHHhccCC---------CCCCCCCC
Confidence 678999999999999999999999999999997 8888754322111 1111111110 11111233
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 747 KKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 747 ~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
..+.+++.+||+.+|++||++.+|+++|+.+++
T Consensus 309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 568899999999999999999999999998865
No 123
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-36 Score=320.99 Aligned_cols=246 Identities=27% Similarity=0.367 Sum_probs=197.2
Q ss_pred eeeeeceEEEEEEEEc---CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 509 LLGVGGFGRVYKGTLD---DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
.||+|+||.||+|.++ ++..+|+|++.... ....+++.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57789999876443 345678999999999999999999999985 45679999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc-cc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH-VS 662 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~ 662 (845)
+|.+++... ..+++..+++++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++......... ..
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 999998543 468999999999999999999998 899999999999999999999999999997643322111 11
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
....++..|+|||.+....++.++|||||||++|||++ |+.||......+ +... .+++ .....
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~-i~~~---------~~~~~ 219 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE------VTQM-IESG---------ERMEC 219 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHH-HHCC---------CCCCC
Confidence 22234578999999988899999999999999999998 999986543221 1111 1111 11123
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
+...+..+.+++.+||+.+|++||++.+|.+.|+.
T Consensus 220 ~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 220 PQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 34456778999999999999999999999999875
No 124
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.2e-36 Score=326.78 Aligned_cols=248 Identities=22% Similarity=0.326 Sum_probs=196.5
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||.||++..+ +|+.+|+|++.... ....+.+..|++++++++||||+++.+++.++...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999875 68999999875421 12234556799999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
..++.......+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++..... .......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~---~~~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD---GKTITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCC---Cceeecc
Confidence 988866555578999999999999999999998 9999999999999999999999999999876432 1122345
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.|+..|+|||++.+..++.++|||||||++|||++|+.||....... ...+.... .....+. ......
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~---------~~~~~~~-~~~~~~ 222 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRR---------TLEDEVK-FEHQNF 222 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHH---------hhccccc-cccccC
Confidence 68999999999999999999999999999999999999986433211 11111111 1111110 011234
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
...+.+++.+||+.+|++||++.|+++.+.
T Consensus 223 ~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 223 TEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 556889999999999999999987764443
No 125
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.3e-37 Score=335.73 Aligned_cols=237 Identities=25% Similarity=0.338 Sum_probs=189.0
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHH-HHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIE-MLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
++||+|+||.||+|+.. +++.+|+|.+.... .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 68899999875432 223345555654 57889999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++.++..++.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE--PEETT 153 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCC--CCCcc
Confidence 9998887543 468889999999999999999998 8999999999999999999999999999875322 12223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .... .+....+ ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~---------~i~~~~~--~~~ 216 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS------QMYD---------NILHKPL--QLP 216 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH------HHHH---------HHhcCCC--CCC
Confidence 3457899999999999999999999999999999999999999653211 1111 1111111 123
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
......+.+++.+||+.+|.+||+..
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 34456788999999999999999764
No 126
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-36 Score=335.43 Aligned_cols=249 Identities=21% Similarity=0.328 Sum_probs=198.9
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
++||+|+||.||+++.. +++.||+|.+... .....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999876 6889999987643 233456688999999998 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--~~~~~ 153 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR--PGDTT 153 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccccc--CCCcc
Confidence 9998887543 479999999999999999999998 9999999999999999999999999999875221 11223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcc--cccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRE--QVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
....||..|+|||++.+..++.++|||||||++|||++|+.||+.....+ .....++......++ .. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~ 223 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--------QI--R 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--------CC--C
Confidence 34678999999999999999999999999999999999999996432221 112222332222211 11 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCC------HHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPS------MGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs------~~~vl~~ 773 (845)
.+......+.+++.+||+.+|.+||+ +.+++++
T Consensus 224 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 23344567889999999999999997 5666644
No 127
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.1e-36 Score=322.48 Aligned_cols=258 Identities=21% Similarity=0.300 Sum_probs=207.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+|... ++..++||.+... .....+++.+|+++++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 35777789999999999999964 7899999976542 3344568899999999999999999999999999999999
Q ss_pred EeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||+++++|.+++.. .....+++.++..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998853 223568999999999999999999998 9999999999999999999999999999876432
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.. .......++..|+|||.+.+..++.++||||||+++|||++|..||...... ...+... +.....+
T Consensus 159 ~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~~~------~~~~~~~ 226 (267)
T cd08229 159 KT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK------IEQCDYP 226 (267)
T ss_pred CC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch----HHHHhhh------hhcCCCC
Confidence 11 1122456888999999999999999999999999999999999998643221 1111111 0011111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
. .........+.+++.+||+.+|++||||.+|++.+++.
T Consensus 227 ~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 227 P---LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred C---CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1 11234567899999999999999999999999998764
No 128
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.6e-36 Score=325.17 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=205.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC------CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD------GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMI 574 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 574 (845)
++|...+.||+|+||.||+|...+ +..+++|...... .....++.+|+.+++.++|+||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 567888899999999999998652 3679999876543 344567899999999999999999999999999999
Q ss_pred EEEEeccCCCccccccCCC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEe
Q 003139 575 LVYEYMANGPLRSHLYGTD--------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVAD 646 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 646 (845)
+||||+++|+|.+++.... ...++|..++.++.|++.||.|||+ .+++||||||+|||+++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence 9999999999999886421 2357899999999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhh
Q 003139 647 FGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQK 725 (845)
Q Consensus 647 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~ 725 (845)
||+++...............++..|+|||.+.++.++.++|||||||++|||++ |+.||......+ +..+. .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~----~ 235 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFV----I 235 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHH----h
Confidence 999976433222222233456788999999998899999999999999999998 888885433211 11111 1
Q ss_pred cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 726 KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+. ....+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 236 ~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 DGG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111 11123334678899999999999999999999999875
No 129
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.4e-36 Score=320.24 Aligned_cols=248 Identities=28% Similarity=0.436 Sum_probs=202.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCD-ERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~Ey~ 580 (845)
.+|...+.||+|+||.||++... |..+++|...... ..+.|.+|+.++++++|+|++++++++. +.+..++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46778889999999999999876 7889999876443 3467899999999999999999999764 556789999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.......+++..+++++.|++.||+|||+ ++++||||||+||++++++.+||+|||+++.....
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---- 155 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 155 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc----
Confidence 99999999876555568999999999999999999998 89999999999999999999999999998753221
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.....++..|+|||++.+..++.++|||||||++|||++ |+.|+.... ..+..... ..+ ...
T Consensus 156 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~-~~~---------~~~ 218 (256)
T cd05082 156 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRV-EKG---------YKM 218 (256)
T ss_pred -CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH-hcC---------CCC
Confidence 122344568999999999999999999999999999997 888875322 11111111 111 111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
..+..++..+.+++.+|++.+|++|||+.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2233456788899999999999999999999998875
No 130
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1e-36 Score=335.05 Aligned_cols=245 Identities=25% Similarity=0.348 Sum_probs=194.8
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHH---HhCCCCCcceEEEEEecCCcEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEML---SKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l---~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
|++.+.||+|+||.||+|... +++.||||.+... .....+.+..|++++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566789999999999999875 6889999987643 223345666676655 566899999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|..++.. ..+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999888753 368999999999999999999998 99999999999999999999999999998753221
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ .... +....
T Consensus 155 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~------~~~~---------i~~~~ 217 (324)
T cd05589 155 --GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE------VFDS---------IVNDE 217 (324)
T ss_pred --CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH------HHHH---------HHhCC
Confidence 122234678999999999999999999999999999999999999996543211 1111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWN 773 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~ 773 (845)
. ..+......+.+++.+||+.+|.+||+ +.+++++
T Consensus 218 ~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 218 V--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred C--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1 123334567889999999999999994 5555543
No 131
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-37 Score=343.31 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=199.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999976 6889999987643 2334567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 999999999998643 468999999999999999999999 999999999999999999999999999986532111
Q ss_pred Cc------------------------------------ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcC
Q 003139 658 QT------------------------------------HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCT 701 (845)
Q Consensus 658 ~~------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg 701 (845)
.. .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 001124699999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC---HHHHHHH
Q 003139 702 RPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS---MGDVLWN 773 (845)
Q Consensus 702 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~~vl~~ 773 (845)
+.||......+. ....... ...+...........+.+++.+|+. +|.+|++ +.+++++
T Consensus 236 ~~Pf~~~~~~~~------~~~i~~~-------~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 236 YPPFCSDNPQET------YRKIINW-------KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCHHHH------HHHHHcC-------CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999975432211 0110000 0001000111234567788899986 9999998 8888765
No 132
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-36 Score=329.68 Aligned_cols=259 Identities=24% Similarity=0.440 Sum_probs=205.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc--------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD--------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 571 (845)
.+|.+.+.||+|+||.||+++.. ....+|+|..... ......++.+|+++++++ +||||++++++|.+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778889999999999999742 2446899987654 345567889999999999 6999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 572 EMILVYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
..++||||+++|+|.+++.... ...++|.++++++.|++.||+|||+ .+++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 9999999999999999885421 2458999999999999999999998 9999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccH
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNI 716 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l 716 (845)
+++.+||+|||+++...............++..|+|||.+.++.++.++||||||+++|||++ |+.||......+ +
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---L 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence 999999999999986433221111122234567999999999999999999999999999999 888875432211 1
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
. .....+. ....+..++..+.+++.+|++.+|++||++.++++.|+.+..
T Consensus 246 ~----~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 246 F----KLLREGH---------RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred H----HHHHcCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1 1111110 111233445678899999999999999999999999988754
No 133
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.6e-36 Score=322.39 Aligned_cols=255 Identities=24% Similarity=0.390 Sum_probs=204.2
Q ss_pred CCCcceeeeeeceEEEEEEEEcC-C---cEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD-G---TKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~-g---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
.|+..+.||+|+||.||+|.+.. + ..|++|..... .....++|..|+.++++++||||+++.+++.+....++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46678899999999999998752 3 36999988754 4555678999999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 85 EFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred ecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 999999999998654 3468999999999999999999998 999999999999999999999999999987643221
Q ss_pred Cccccc-ccc--cCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 658 QTHVST-AVK--GSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 658 ~~~~~~-~~~--gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
...... ... .+..|+|||.+.+..++.++|||||||++|||++ |+.||...... ....+.. .
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~----~------- 226 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE----Q------- 226 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH----c-------
Confidence 111111 111 2457999999999999999999999999999886 99988654322 1111111 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
......+.+++..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus 227 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 227 --DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 001112234566788999999999999999999999998865
No 134
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-36 Score=335.00 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=197.4
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
++||+|+||.||+|+.. +++.+|+|.+... .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 5788999987643 334456678899988877 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~--~~~~~ 153 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR--PGDTT 153 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccC--CCCcc
Confidence 9998887543 468999999999999999999999 8999999999999999999999999999875322 11122
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcc--cccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRE--QVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
....||..|+|||++.+..++.++|||||||++|||++|+.||....... ......+......... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~----------~~ 223 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ----------IR 223 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC----------CC
Confidence 34678999999999999999999999999999999999999996422211 1112222222221111 12
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCC------HHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPS------MGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs------~~~vl~~ 773 (845)
++......+.+++.+||+.||++||+ +.+++++
T Consensus 224 ~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 224 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 33445567889999999999999998 4566543
No 135
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.9e-36 Score=320.28 Aligned_cols=255 Identities=30% Similarity=0.460 Sum_probs=207.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.++|.+.+.||+|+||.||+|..++++.+++|.+.... ...+++.+|++++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 35788889999999999999998888889999877543 23467899999999999999999999999989999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.......+++.+++.++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++.... ....
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~-~~~~ 159 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIED-DEYT 159 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccc-hhhh
Confidence 99999999977655679999999999999999999998 8999999999999999999999999999876432 1111
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......++..|+|||.+.+..++.++||||||++++||++ |+.||......+ . .... .. ....
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~---~~~~-~~---------~~~~ 223 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---V---LEQV-ER---------GYRM 223 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---H---HHHH-Hc---------CCCC
Confidence 1122334568999999999999999999999999999998 998885432211 1 1111 00 0111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
..+...+..+.+++.+|++.+|++||++.++++.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1223345678999999999999999999999998874
No 136
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.7e-36 Score=331.21 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=206.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc--------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD--------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 571 (845)
.+|.+.+.||+|+||.||++... .+..+|+|..... .....+++.+|+++++++ +||||++++++|.+.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35778889999999999999742 1236899987643 344567899999999999 7999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 572 EMILVYEYMANGPLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
..++++||+++|+|.+++.... ...++|.+++.++.|++.||+|||+ ++++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence 9999999999999999886421 2358999999999999999999998 9999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccH
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNI 716 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l 716 (845)
+++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 242 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------ 242 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH------
Confidence 999999999999976433221111222334567999999999999999999999999999998 7787754321
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
.++..... .+ .....+......+.+++.+|++.+|++||++.++++.|+.+....
T Consensus 243 ~~~~~~~~-~~---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 243 EELFKLLK-EG---------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHH-cC---------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111111 11 111122344567889999999999999999999999999886533
No 137
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.4e-37 Score=336.56 Aligned_cols=253 Identities=22% Similarity=0.250 Sum_probs=201.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+++.. +|+.+|+|++... .....+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999875 6889999987643 2234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~-~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA-N 155 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCC-C
Confidence 999999999998654 2478999999999999999999999 9999999999999999999999999999976432 1
Q ss_pred CcccccccccCCCcCChhhhc------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 658 QTHVSTAVKGSFGYLDPEYFR------RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~------~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||......+ ..........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~i~~~~~--- 226 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK------TYNNIMNFQR--- 226 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH------HHHHHHcCCC---
Confidence 122233457899999999986 4567899999999999999999999996543221 1111111000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+.....+.....+.+++..|++ +|.+||++.+++.+
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 ----FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ----ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 01001112345678899999997 99999999998754
No 138
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.9e-36 Score=327.10 Aligned_cols=264 Identities=22% Similarity=0.274 Sum_probs=198.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.++|+..+.||+|+||.||+|+.. +++.+|+|.+..... .....+.+|++++++++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999976 688999998764432 223467889999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++ ++|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~ 156 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSV--P 156 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccC--C
Confidence 995 6777777543 3468899999999999999999999 9999999999999999999999999999875322 1
Q ss_pred cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch--------
Q 003139 659 THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML-------- 729 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~-------- 729 (845)
........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........ ..............
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD--QLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHHhCCCChhhccchhh
Confidence 122234568899999999865 4689999999999999999999999975432111 11111110000000
Q ss_pred -hhhhccccCCCCCH---------HHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 -DQIMDSNLVGKVNP---------ASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 -~~~~d~~l~~~~~~---------~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
............+. .....+.+++.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000000000000 112457799999999999999999999864
No 139
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.6e-36 Score=318.50 Aligned_cols=248 Identities=26% Similarity=0.401 Sum_probs=197.6
Q ss_pred eeeeeceEEEEEEEEc---CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCC
Q 003139 509 LLGVGGFGRVYKGTLD---DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
.||+|+||.||+|.+. .+..||+|...... ....++|.+|++++++++||||++++++|. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 35569999876653 344567999999999999999999999985 457899999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc-ccc
Q 003139 585 LRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH-VST 663 (845)
Q Consensus 585 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~-~~~ 663 (845)
|.+++... ...+++.++++++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++......... ...
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99998643 3478999999999999999999998 899999999999999999999999999997533221111 112
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
...++..|+|||.+.++.++.++|||||||++|||++ |+.||......+ +.. ....+ .....+
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~-~~~~~---------~~~~~~ 220 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE------VMS-FIEQG---------KRLDCP 220 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH------HHH-HHHCC---------CCCCCC
Confidence 2234578999999998899999999999999999996 999986543221 111 11111 111233
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
..++..+.+++.+||+.+|++||++.+|.+.|+..
T Consensus 221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 44567888999999999999999999999998754
No 140
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.1e-36 Score=321.19 Aligned_cols=248 Identities=30% Similarity=0.470 Sum_probs=196.7
Q ss_pred eeeeeceEEEEEEEEcC-Cc--EEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 509 LLGVGGFGRVYKGTLDD-GT--KVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
+||+|+||.||+|.+.+ +. .+++|..... .....+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 68999999999999753 43 4688887643 345567889999999999 7999999999999999999999999999
Q ss_pred CccccccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 584 PLRSHLYGTD--------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 584 sL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
+|.+++.... ...+++.++++++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999886432 2358899999999999999999998 8999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCc
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGM 728 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (845)
++.... .........+..|+|||++....++.++|||||||+++||++ |+.||......+ ......
T Consensus 159 ~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~------~~~~~~---- 225 (270)
T cd05047 159 SRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKLP---- 225 (270)
T ss_pred ccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH------HHHHHh----
Confidence 864211 111112233567999999999999999999999999999997 999885432211 111111
Q ss_pred hhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 729 LDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 729 ~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
.......+......+.+++.+|++.+|.+||++.++++.|+.++
T Consensus 226 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 226 ------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ------CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111122234467889999999999999999999999998765
No 141
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.4e-36 Score=340.98 Aligned_cols=254 Identities=20% Similarity=0.259 Sum_probs=198.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||++... +++.||+|++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999865 6889999987543 2334567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999998543 468899999999999999999999 999999999999999999999999999996321100
Q ss_pred Cc---------------------------------------------ccccccccCCCcCChhhhccCCCCchhHHHHHH
Q 003139 658 QT---------------------------------------------HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFG 692 (845)
Q Consensus 658 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~G 692 (845)
.. .......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000124699999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCC---CCHHH
Q 003139 693 VVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDR---PSMGD 769 (845)
Q Consensus 693 vvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R---Ps~~~ 769 (845)
|++|||++|+.||......+. ........ ..+.-.........+.+++.+|+. +|.+| +++.+
T Consensus 236 vil~elltG~~Pf~~~~~~~~------~~~i~~~~-------~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~ 301 (377)
T cd05629 236 AIMFECLIGWPPFCSENSHET------YRKIINWR-------ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHE 301 (377)
T ss_pred hhhhhhhcCCCCCCCCCHHHH------HHHHHccC-------CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHH
Confidence 999999999999965432211 00000000 000000011234567889999997 67765 59999
Q ss_pred HHHHH
Q 003139 770 VLWNL 774 (845)
Q Consensus 770 vl~~L 774 (845)
++++-
T Consensus 302 ~l~hp 306 (377)
T cd05629 302 IKSHP 306 (377)
T ss_pred HhcCC
Confidence 88763
No 142
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.2e-36 Score=327.62 Aligned_cols=263 Identities=27% Similarity=0.402 Sum_probs=205.7
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC-----------------CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcce
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD-----------------GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVS 562 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~-----------------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~ 562 (845)
.++|+..+.||+|+||.||+|...+ +..+|+|.+... .....+++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568888999999999999998642 245899987654 3445678999999999999999999
Q ss_pred EEEEEecCCcEEEEEEeccCCCccccccCCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCc
Q 003139 563 LIGYCDERSEMILVYEYMANGPLRSHLYGTD---------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTN 633 (845)
Q Consensus 563 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~N 633 (845)
+++++..++..++|+||+++++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhc
Confidence 9999999999999999999999999986432 1368999999999999999999998 899999999999
Q ss_pred EEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc--CCCCCCCCCCc
Q 003139 634 ILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC--TRPALNPVLPR 711 (845)
Q Consensus 634 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt--g~~p~~~~~~~ 711 (845)
|++++++.++|+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..|+......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999976433222222334556789999999998899999999999999999998 56666432211
Q ss_pred ccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 712 EQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 712 ~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.............. .......+...+..+.+++.+|++.+|++||++.+|++.|+
T Consensus 241 ---~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 ---QVIENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred ---HHHHHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 11112211111111 01111122334567999999999999999999999998875
No 143
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-36 Score=339.06 Aligned_cols=261 Identities=21% Similarity=0.207 Sum_probs=198.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
.++|...+.||+|+||.||++... .++.||+|+.. .+.+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999865 68899999743 23567899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+. ++|..++... ..+++.+++.|+.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 165 ~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-~ 237 (391)
T PHA03212 165 YK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-A 237 (391)
T ss_pred CC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-c
Confidence 95 6888877543 468999999999999999999999 899999999999999999999999999997532211 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccc----cHHHHHHHHhhc---------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQV----NIAEWAMTWQKK--------- 726 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~----~l~~~~~~~~~~--------- 726 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.|+......... ............
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 2223467999999999999999999999999999999999999876543211100 000000000000
Q ss_pred -Cchhhhh----cc-ccC-CCC-----CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 727 -GMLDQIM----DS-NLV-GKV-----NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 727 -~~~~~~~----d~-~l~-~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..+.... .. ... ... ....+..+.+++.+||+.||++|||+.|++++-
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp 377 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFA 377 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcCh
Confidence 0000000 00 000 000 013456788999999999999999999998653
No 144
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.9e-37 Score=337.70 Aligned_cols=243 Identities=24% Similarity=0.305 Sum_probs=196.9
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
+.||+|+||.||++... +|+.+|+|.+... ......++..|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999865 6889999987643 2334567788999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVST 663 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 663 (845)
+|..++... ..+++.++..++.||+.||+|||+ ..+|+||||||+|||+++++.+||+|||+++.... ......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~--~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMK 154 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC--CCcccc
Confidence 999888543 468999999999999999999995 26899999999999999999999999999875321 111223
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......+. ... +.... ..++.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~------~~~---------i~~~~--~~~p~ 217 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FEL---------ILMEE--IRFPR 217 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH------HHH---------HhcCC--CCCCC
Confidence 45699999999999999999999999999999999999999965332110 000 00000 11223
Q ss_pred HHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 744 ASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.....+.+++.+||+.||++|+ ++.+++++
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 3456788999999999999996 89998865
No 145
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-36 Score=324.99 Aligned_cols=254 Identities=28% Similarity=0.411 Sum_probs=201.1
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecC------
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDER------ 570 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~------ 570 (845)
++++.|+..+.||+|+||.||+|... +++.+|+|+..... ....++.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45677888889999999999999875 57889999876443 3346788999999998 799999999998643
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
...++||||+++++|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 458999999999999999876555678999999999999999999999 89999999999999999999999999998
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK 725 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~ 725 (845)
+..... ........|+..|+|||++. +..++.++|||||||++|||++|+.||........ +. ...
T Consensus 159 ~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-----~~--~~~ 229 (272)
T cd06637 159 AQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-----LF--LIP 229 (272)
T ss_pred eecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-----HH--HHh
Confidence 753321 11223456889999999986 34688899999999999999999999864332111 00 000
Q ss_pred cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 726 KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
... ...+ .....+..+.+++.+||..+|.+||++.+++++
T Consensus 230 ~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 230 RNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred cCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 000 0111 112344578899999999999999999998753
No 146
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.7e-36 Score=334.40 Aligned_cols=252 Identities=23% Similarity=0.292 Sum_probs=198.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc----CCcEEEEEEcCCC----ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD----DGTKVAVKRGNPR----SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
+|++.+.||+|+||.||+++.. +++.+|+|.+... .....+.+..|++++.++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778889999999999998753 5788999987532 223346688899999999 599999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++|+|.+++... ..+++.++..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999988543 468999999999999999999998 89999999999999999999999999999753
Q ss_pred CCCCCcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
... .........||..|+|||++.+. .++.++|||||||++|||++|+.||........ ..........
T Consensus 156 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--~~~~~~~~~~------- 225 (332)
T cd05614 156 LSE-EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT--QSEVSRRILK------- 225 (332)
T ss_pred ccc-CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC--HHHHHHHHhc-------
Confidence 321 11222346799999999999865 478999999999999999999999964332211 1111111110
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.++ .++......+.+++.+||+.||++|| ++++++++
T Consensus 226 ~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 011 12334456788999999999999999 67777654
No 147
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.1e-37 Score=335.35 Aligned_cols=242 Identities=21% Similarity=0.314 Sum_probs=195.5
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
++||+|+||.||+|+.. +++.+|+|.+... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999876 5789999987643 234456678899999876 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~--~~~~~ 153 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL--NGVTT 153 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceeccc--CCccc
Confidence 9999888543 468999999999999999999999 8999999999999999999999999999875322 12223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~------~~~~---------i~~~~~--~~p 216 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD------LFES---------ILHDDV--LYP 216 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH------HHHH---------HHcCCC--CCC
Confidence 34678999999999999999999999999999999999999997543221 1111 111111 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCC-------CHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRP-------SMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RP-------s~~~vl~~ 773 (845)
......+.+++.+||+.+|++|| ++.+++++
T Consensus 217 ~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 217 VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 23346788999999999999999 77777654
No 148
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.3e-36 Score=325.10 Aligned_cols=256 Identities=29% Similarity=0.435 Sum_probs=204.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
.++|+..+.||+|+||.||+|... ++..+|+|.+... .....++|.+|+.++++++||||++++++|.++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457888899999999999999864 3578999987654 344557799999999999999999999999999999
Q ss_pred EEEEEeccCCCccccccCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCc
Q 003139 574 ILVYEYMANGPLRSHLYGTD--------------------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTN 633 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~N 633 (845)
++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 99999999999999885321 2357899999999999999999998 899999999999
Q ss_pred EEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcc
Q 003139 634 ILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPRE 712 (845)
Q Consensus 634 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~ 712 (845)
||+++++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999875332211111222344667999999999999999999999999999997 77787543221
Q ss_pred cccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 713 QVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
++... ...+. .. ..+...+..+.+++.+||+.+|.+||++.|+++.|+
T Consensus 240 -----~~~~~-~~~~~--------~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 240 -----EVIYY-VRDGN--------VL-SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred -----HHHHH-HhcCC--------CC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 11111 11111 11 112334567899999999999999999999999886
No 149
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3e-36 Score=319.45 Aligned_cols=248 Identities=26% Similarity=0.386 Sum_probs=201.0
Q ss_pred eeeeeceEEEEEEEEcC--C--cEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 509 LLGVGGFGRVYKGTLDD--G--TKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
.||+|++|.||+|.+.+ + ..+|+|.+..... ...++|.+|++++++++||||+++++++.+ ...++|+||++++
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 68999999999998753 3 3689999877655 667889999999999999999999999988 8899999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc-ccc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT-HVS 662 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~-~~~ 662 (845)
+|.+++.......++|..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++........ ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 99999876543578999999999999999999998 89999999999999999999999999999865432211 112
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
....++..|+|||.+.+..++.++|||||||++|||++ |+.||......+ ......... .....
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------~~~~~~~~~---------~~~~~ 222 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ------ILKKIDKEG---------ERLER 222 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHhcC---------CcCCC
Confidence 23457789999999999999999999999999999998 999986432221 111111100 00112
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 PEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 2334567899999999999999999999998875
No 150
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.6e-36 Score=356.49 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=206.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..++||+|+||.||+|... +|+.||+|++... .....++|.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57888999999999999999875 5889999987643 2334567999999999999999999999999999999999
Q ss_pred EeccCCCccccccCC---------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 578 EYMANGPLRSHLYGT---------DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
||+++|+|.+++... ....+++..+++++.||++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999887531 12356788899999999999999999 899999999999999999999999999
Q ss_pred ccCCCCCCCC----------------cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcc
Q 003139 649 LSKTGPALDQ----------------THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPRE 712 (845)
Q Consensus 649 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~ 712 (845)
+++....... ........||+.|||||.+.+..++.++|||||||++|||++|+.||......+
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9976421110 001123569999999999999999999999999999999999999996532211
Q ss_pred cccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCC-CHHHHHHHHHHhhhh
Q 003139 713 QVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRP-SMGDVLWNLEYALQL 780 (845)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-s~~~vl~~L~~~~~~ 780 (845)
.. + . ..+.++... ......+..+.+++.+|++.+|++|| +++++++.|+..++.
T Consensus 239 i~----~------~---~~i~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 239 IS----Y------R---DVILSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hh----h------h---hhccChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 0 0 001111000 01123456788999999999999995 678888888877653
No 151
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2e-36 Score=325.53 Aligned_cols=246 Identities=24% Similarity=0.361 Sum_probs=196.2
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||.||++... +|+.+|+|++.... ....+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 68899999876432 23346778899999999999999999999999999999999999999
Q ss_pred cccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccc
Q 003139 586 RSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVST 663 (845)
Q Consensus 586 ~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 663 (845)
..++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--~~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--SKTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC--cccc
Confidence 8877432 33568999999999999999999999 899999999999999999999999999997543211 1223
Q ss_pred ccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 664 AVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 664 ~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..... ..+..... ..+.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~---------~~~~~~~~--~~~~ 222 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELK---------QRILNDSV--TYPD 222 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHH---------HhhcccCC--CCcc
Confidence 45789999999999999999999999999999999999999965332111 00000 11111111 1233
Q ss_pred HHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 744 ASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
..+..+.+++.+||+.+|++|| ++++++++
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 223 KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 4566788999999999999999 66676654
No 152
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.2e-36 Score=320.19 Aligned_cols=252 Identities=25% Similarity=0.383 Sum_probs=203.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-----hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-----EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++|...+.||+|++|.||++... +++.+++|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888899999999999999864 68899999765331 2234678899999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
|+||+++++|.+++... ..+++..+.+++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 99999999999988543 468899999999999999999998 8999999999999999999999999999875432
Q ss_pred CCCcc-cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTH-VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
..... ......++..|+|||.+.+..++.++||||||+++|||++|+.||......+. . .....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~------------~~~~~ 221 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA---I------------FKIAT 221 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH---H------------HHHhc
Confidence 11111 11334578899999999999999999999999999999999999864322110 0 01111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.......+......+.+++.+||..+|.+||++.+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 222 QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111122334456678899999999999999999999865
No 153
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.6e-36 Score=318.39 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=209.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+|... +|+.+++|.+.. ......+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999987 789999997653 23344678999999999999999999999999999999999
Q ss_pred EeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||+++++|.+++... ....+++.+++.++.|++.||.|||+ .+|+||||||+||++++++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999888542 23568999999999999999999998 9999999999999999999999999999875332
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
. ........++..|+|||.+.+..++.++|||||||++|||++|+.||.... ..+.++..... .+
T Consensus 159 ~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~-~~-------- 223 (267)
T cd08224 159 K--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIE-KC-------- 223 (267)
T ss_pred C--CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhh-cC--------
Confidence 1 111233467889999999999999999999999999999999999985432 11211111111 11
Q ss_pred ccCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVN-PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~-~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+ ......+.+++.+||..+|++||++.+|+++|+.+
T Consensus 224 -~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 224 -DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred -CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 111112 24556788999999999999999999999999875
No 154
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=9.1e-37 Score=334.73 Aligned_cols=237 Identities=23% Similarity=0.331 Sum_probs=192.4
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.+ +++.||+|.+... .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 5789999987643 233456778899999876 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~--~~~~~ 153 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF--NGKTT 153 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc--CCCcc
Confidence 9999888543 468999999999999999999998 9999999999999999999999999999875321 11223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +..... ..+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~------~~~~---------i~~~~~--~~~ 216 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD------LFEA---------ILNDEV--VYP 216 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH------HHHH---------HhcCCC--CCC
Confidence 34679999999999999999999999999999999999999996543211 1111 111111 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
......+.+++.+||+.||++||++.
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 217 TWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 23456788999999999999999983
No 155
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.4e-36 Score=333.98 Aligned_cols=241 Identities=24% Similarity=0.348 Sum_probs=195.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCC-CcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHR-HLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~ 577 (845)
+|+..+.||+|+||.||+|+.. +++.||+|.+... .....+.+..|.+++..++|+ +|+++.+++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778889999999999999876 5778999987643 234456788899999999765 6888999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~-- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF-- 153 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecCC--
Confidence 999999999888543 468999999999999999999999 8999999999999999999999999999874221
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ + ...+.+..
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~------------~~~i~~~~- 217 (324)
T cd05587 154 GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---L------------FQSIMEHN- 217 (324)
T ss_pred CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---H------------HHHHHcCC-
Confidence 1122334578999999999999999999999999999999999999996543211 1 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
..++......+.+++.+||+.+|.+|++.
T Consensus 218 -~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 -VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 12233445678899999999999999986
No 156
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-36 Score=333.21 Aligned_cols=237 Identities=27% Similarity=0.377 Sum_probs=190.3
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHH-HHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIE-MLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.. +|+.||+|++.... ....+++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999975 68999999876432 223345555555 45789999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE--HSKTT 153 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccccc--CCCcc
Confidence 9999888543 468999999999999999999998 8999999999999999999999999999875322 12223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... +... .+....+ ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~------~~~~---------~i~~~~~--~~~ 216 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA------EMYD---------NILNKPL--RLK 216 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH------HHHH---------HHHcCCC--CCC
Confidence 4567899999999999999999999999999999999999999653221 1111 1111111 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
+.....+.+++.+||+.+|.+||++.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 33456788999999999999999985
No 157
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-36 Score=333.34 Aligned_cols=241 Identities=23% Similarity=0.332 Sum_probs=195.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~ 577 (845)
+|+..+.||+|+||.||+|+.. +++.+|+|.+... .....+.+..|..++..+ +|++|+++.+++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778889999999999999876 5788999987643 223345677788888877 5899999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++.+++.++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~-- 153 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW-- 153 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecCC--
Confidence 999999999888543 468999999999999999999998 8999999999999999999999999999975321
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ + ...+.+...
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~---~------------~~~i~~~~~ 218 (323)
T cd05616 154 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE---L------------FQSIMEHNV 218 (323)
T ss_pred CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH---H------------HHHHHhCCC
Confidence 1122335678999999999999999999999999999999999999996543211 1 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
.++......+.+++.+|++.+|.+|++.
T Consensus 219 --~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 --AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred --CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1233455678899999999999999984
No 158
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.1e-37 Score=341.73 Aligned_cols=253 Identities=23% Similarity=0.258 Sum_probs=201.6
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
..++|+..+.||+|+||.||+++.. +++.+|+|.+... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467899999999999999999876 6889999987532 22334567889999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||||+++|+|.+++... .++...+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999988543 47888899999999999999999 9999999999999999999999999999976432
Q ss_pred CCCcccccccccCCCcCChhhhccC----CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQ----QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
. .........||+.|+|||.+.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 195 ~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---------------~~~~ 258 (370)
T cd05596 195 N-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---------------TYSK 258 (370)
T ss_pred C-CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---------------HHHH
Confidence 1 11122345799999999998653 47899999999999999999999997543211 0111
Q ss_pred hhccc--cCCCCCHHHHHHHHHHHHHhhhhCCCC--CCCHHHHHHHH
Q 003139 732 IMDSN--LVGKVNPASLKKFGETAEKCLAEHGVD--RPSMGDVLWNL 774 (845)
Q Consensus 732 ~~d~~--l~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~~vl~~L 774 (845)
+++.. +.-.........+.+++.+||+.+|.+ ||++.+++++-
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 259 IMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred HHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 11111 110111234567889999999999987 99999998763
No 159
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.3e-37 Score=311.84 Aligned_cols=266 Identities=23% Similarity=0.279 Sum_probs=202.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHh--HHHHHHHHHHHHhCCCCCcceEEEEEe--cCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQG--IAEFRTEIEMLSKLRHRHLVSLIGYCD--ERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~lV 576 (845)
++|+..+.|++|.||.||+|+.+ +++.||+|+++...+.. --.-++||.+|.+++|||||.+-.+.. +-+.+|||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 34677788999999999999975 68899999987654221 113478999999999999999988774 44579999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
||||+. +|..++.... +++...++..+..|+++|++|||. ..|+|||||++|+|++..|.+||+||||||.....
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999975 7888886554 589999999999999999999999 88999999999999999999999999999985532
Q ss_pred CCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh---
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI--- 732 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~--- 732 (845)
....+..+-|.+|+|||.+.+ ..|+...|+||+|||+.||+++++.|.+....++.+.+--......+.....+
T Consensus 231 --~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 231 --LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred --cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 233567788999999998876 57999999999999999999999999876655543322111000000000000
Q ss_pred -----------hccccCCCCCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 733 -----------MDSNLVGKVNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 733 -----------~d~~l~~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.-..+...+.-. ..+.-.+++...+..||.+|-|++|.+++=
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~ 362 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE 362 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence 001111112111 235566889999999999999999988663
No 160
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.3e-36 Score=317.44 Aligned_cols=249 Identities=32% Similarity=0.475 Sum_probs=204.8
Q ss_pred eeeeeeceEEEEEEEEcC----CcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLDD----GTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|.... +..+++|.+...... ..+++.+|++++..++|+|++++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 369999999999999764 778999988765433 367899999999999999999999999999999999999999
Q ss_pred CCccccccCCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 583 GPLRSHLYGTD-------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 583 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
++|.+++.... ...+++.++.+++.|+++||+|||+ .+++||||||+||++++++.+||+|||.++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999986542 3679999999999999999999998 9999999999999999999999999999987554
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||.+....++.++||||+|++++||++ |+.||......+ .... ...+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~-~~~~------- 223 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE------VLEY-LRKG------- 223 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH------HHHH-HHcC-------
Confidence 332223345567889999999998899999999999999999999 588886542211 1111 1111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.....+...+..+.+++.+|++.+|++||++.+++++|+
T Consensus 224 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 --YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred --CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111223344678899999999999999999999998874
No 161
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.8e-36 Score=317.60 Aligned_cols=253 Identities=25% Similarity=0.406 Sum_probs=205.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|+..+.||+|+||.||+|...++..+++|..... ....+.|.+|++++++++|+||+++.+.+.+ ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 567888999999999999999877888999987654 3345788999999999999999999999887 77899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++...... ...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~ 159 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTA 159 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCC-ccc
Confidence 9999999976555678999999999999999999998 899999999999999999999999999997543211 111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||++....++.++|+|||||+++||++ |+.||....... +..+ ...+ ....
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~----~~~~---------~~~~ 223 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---VIRA----LERG---------YRMP 223 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH---HHHH----HhCC---------CCCC
Confidence 223345678999999999899999999999999999999 888886432211 1111 1111 1111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.....+..+.+++.+|++.+|++||++.++++.|+.
T Consensus 224 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 223445678899999999999999999999999874
No 162
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.7e-36 Score=332.00 Aligned_cols=244 Identities=21% Similarity=0.333 Sum_probs=196.2
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
++||+|+||.||+|+.. +++.+|+|.+... .....+.+.+|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999875 5788999987653 234456788999999888 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG--PGDTT 153 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccC--CCCce
Confidence 9998887543 469999999999999999999999 8999999999999999999999999999875221 11223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||+||||++|+.||............++......... . .++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~--~~p 223 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------I--RIP 223 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------C--CCC
Confidence 346799999999999999999999999999999999999999975443333222233322222111 1 123
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
......+.+++.+||+.||++||++.
T Consensus 224 ~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 224 RFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 33456778999999999999999853
No 163
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-36 Score=321.36 Aligned_cols=254 Identities=25% Similarity=0.362 Sum_probs=202.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|+..+.||+|+||.||+|+.. +++.+|+|+.........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888899999999999999964 68889999887555455567889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++... .++++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..... ..
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--~~ 161 (267)
T cd06646 89 GGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--IA 161 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeeccc--cc
Confidence 999999988543 468999999999999999999998 89999999999999999999999999999764321 11
Q ss_pred cccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 661 VSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......|+..|+|||.+. ...++.++|||||||++|||++|+.|+....+.+... . .... ....+..
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~------~-~~~~---~~~~~~~ 231 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------L-MSKS---NFQPPKL 231 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe------e-eecC---CCCCCCC
Confidence 122356888999999884 4557889999999999999999999985433221100 0 0000 0000111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
. ........+.+++.+||+.+|++||+++++++.|
T Consensus 232 ~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 K--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred c--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 0 1123456788999999999999999999998754
No 164
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-37 Score=318.68 Aligned_cols=247 Identities=25% Similarity=0.397 Sum_probs=208.8
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
.+|++.+.||+|.||.|-+|.. ..|+.||||.+.. .+++++-.+++|+++|+.|+||||++++.+|+..+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4677777899999999999985 5799999997654 35677778899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||..+|.|.+++. ..+.|++.+...+++||..|+.|+|. ++++|||||.+|||||+|+++||+||||+-.. .
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly---~ 204 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLY---A 204 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhh---c
Confidence 9999999999995 44689999999999999999999998 99999999999999999999999999999763 3
Q ss_pred CcccccccccCCCcCChhhhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLT-EKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
+......++|++-|.+||...+.+|. +.+|-||+||+||.|+.|..||++.... .+ +++ +..|..
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~l---vrQ-Is~GaY------- 270 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RL---VRQ-ISRGAY------- 270 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HH---HHH-hhcccc-------
Confidence 44556688999999999999999985 7899999999999999999999764321 11 111 111111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..+..+....-|++|||..+|+.|-|+.+|..+-
T Consensus 271 ----rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 271 ----REPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred ----cCCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1234455667889999999999999999997654
No 165
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.1e-36 Score=318.77 Aligned_cols=256 Identities=25% Similarity=0.401 Sum_probs=204.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-C---CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-D---GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|++.+.||+|+||.||+|.+. + +..+|+|.+.... ....+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778889999999999999864 2 3368999876543 34457899999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999986543 468999999999999999999998 99999999999999999999999999999864332
Q ss_pred CCcc-cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 657 DQTH-VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 657 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.... ......++..|+|||++.++.++.++||||||++++|+++ |+.||......+ ..... .++
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~----~~~------- 225 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAI----EEG------- 225 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHH----hCC-------
Confidence 1111 1112233568999999999999999999999999999886 999886543221 11111 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+...+..+.+++.+|++.+|.+||+|.++++.|+.+
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 --YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00111233456788999999999999999999999999864
No 166
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2e-36 Score=331.49 Aligned_cols=240 Identities=25% Similarity=0.347 Sum_probs=191.6
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.. +++.||+|.+... .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999976 5788999987643 223345566677777654 899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~--~~~~ 153 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG--EGKA 153 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC--CCcc
Confidence 9999888543 468999999999999999999999 99999999999999999999999999999753221 1223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +... ...++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~------~~~~---------i~~~--~~~~~ 216 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE------LFDS---------ILND--RPHFP 216 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH------HHHH---------HHcC--CCCCC
Confidence 45678999999999999999999999999999999999999997543211 1111 1100 11123
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH-HHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG-DVL 771 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~-~vl 771 (845)
......+.+++.+||+.+|.+||++. +++
T Consensus 217 ~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 217 RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 33456778999999999999999875 443
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3.2e-36 Score=324.84 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=202.4
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
|+..+.||+|+||.||++... +++.+|+|++.... ....+.+.+|+.++++++|+|++++++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999876 68899999875432 22345678899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.......+++.+++.++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 155 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG--- 155 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC---
Confidence 999999998865554579999999999999999999998 99999999999999999999999999998753321
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... . ...... .. ..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~--~-~~~~~~-----~~-----~~ 222 (285)
T cd05630 156 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE--E-VERLVK-----EV-----QE 222 (285)
T ss_pred ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH--H-HHhhhh-----hh-----hh
Confidence 11223468999999999999999999999999999999999999997543211100 0 000000 00 01
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWNLE 775 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~L~ 775 (845)
..+......+.+++.+||+.+|++||+ +.|++++-.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 223 EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 122334456889999999999999999 888887533
No 168
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.9e-36 Score=320.37 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=193.1
Q ss_pred eeeeeceEEEEEEEEcC---CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCC
Q 003139 509 LLGVGGFGRVYKGTLDD---GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
.||+|+||.||+|...+ +..+++|++.... ......|.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998653 3578999876543 3444678999999999999999999999999999999999999999
Q ss_pred ccccccCCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 585 LRSHLYGTD---LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 585 L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
|.+++.... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999986432 2356788889999999999999998 8999999999999999999999999999975332221122
Q ss_pred ccccccCCCcCChhhhccC-------CCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 662 STAVKGSFGYLDPEYFRRQ-------QLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~-------~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
.....++..|+|||++.+. .++.++||||||+++|||++ |+.||......+. ... ...+....+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~---~~~----~~~~~~~~~~ 231 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV---LTY----TVREQQLKLP 231 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH---HHH----HhhcccCCCC
Confidence 2344577889999998642 35789999999999999996 9999865332211 111 0011111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
++.+ .......+.+++..|+ .+|++||++.||++.|+
T Consensus 232 ~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 2221 1223456778999998 68999999999998875
No 169
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.9e-36 Score=318.92 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=205.3
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++.+++++.....||+|+||.||+|+.. ++..+++|..........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 4456777777889999999999999865 577899998877776777889999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEeccccCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPL--SWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKT 652 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~ 652 (845)
|+||+++++|.+++.... ..+ ++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 999999999999986532 234 788899999999999999998 89999999999999986 67999999999875
Q ss_pred CCCCCCcccccccccCCCcCChhhhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 653 GPALDQTHVSTAVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
..... .......++..|+|||++.+. .++.++||||||+++|||++|+.|+....... ...|.....
T Consensus 159 ~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---~~~~~~~~~------ 227 (268)
T cd06624 159 LAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---AAMFKVGMF------ 227 (268)
T ss_pred cccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---hhHhhhhhh------
Confidence 43211 112234578999999998764 37899999999999999999999986432111 111110000
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....++......+.+++.+||+.+|.+||++.+++++
T Consensus 228 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 -----KIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred -----ccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 01112334455678899999999999999999998764
No 170
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=7.1e-36 Score=316.28 Aligned_cols=250 Identities=20% Similarity=0.318 Sum_probs=204.4
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCC-CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNP-RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..+.||+|+||.||++... +++.+++|.+.. ......+.+.+|+.++++++|+||+++++.+.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677889999999999999875 688999998653 33445678889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.......+++..++.++.|++.||.|||+ ++|+|+||||+||++++++.++|+|||+++..... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~--~~ 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP--GA 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc--cc
Confidence 99999998865555568999999999999999999998 99999999999999999999999999998764321 12
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......|+..|+|||++.+..++.++|+||||+++|||++|+.||....... ...... .+.. ..
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~------~~~~~~-~~~~---------~~ 219 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN------LILKVC-QGSY---------KP 219 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH------HHHHHh-cCCC---------CC
Confidence 2234568889999999999999999999999999999999999986432211 111111 1111 11
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+......+.+++.+||+.+|++||++.+++..
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 223345678899999999999999999999754
No 171
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-36 Score=341.50 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=195.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.|+..+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788899999999999999865 67889999876432 3345678899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC-
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD- 657 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~- 657 (845)
|+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999988543 468889999999999999999999 899999999999999999999999999975321000
Q ss_pred --------------------------------------------CcccccccccCCCcCChhhhccCCCCchhHHHHHHH
Q 003139 658 --------------------------------------------QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGV 693 (845)
Q Consensus 658 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gv 693 (845)
.........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 000112356899999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC---HHHH
Q 003139 694 VLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS---MGDV 770 (845)
Q Consensus 694 vl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~~v 770 (845)
+||||++|++||....+.+. ....... ...+...........+.+++.+++ .+|++|++ +.++
T Consensus 237 il~elltG~~Pf~~~~~~~~------~~~i~~~-------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei 302 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLET------QMKVINW-------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEI 302 (382)
T ss_pred HHHHHHhCCCCCCCCCHHHH------HHHHHcc-------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHH
Confidence 99999999999975433211 0010000 001110111223445667777765 49999987 7776
Q ss_pred HHH
Q 003139 771 LWN 773 (845)
Q Consensus 771 l~~ 773 (845)
+++
T Consensus 303 ~~h 305 (382)
T cd05625 303 KAH 305 (382)
T ss_pred hcC
Confidence 654
No 172
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=320.90 Aligned_cols=257 Identities=24% Similarity=0.288 Sum_probs=195.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----cEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-----EMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~lV 576 (845)
.|...+++|+|.||.||+|++. .++.||||+.-..... --.|+++|+++.|||||+|+-++.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4666789999999999999976 5689999986544321 136999999999999999998884322 34689
Q ss_pred EEeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccccCCC
Q 003139 577 YEYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGLSKTG 653 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGla~~~ 653 (845)
|||||. +|.+.++. .....++...+.-+..||++||.|||+ .+|+||||||+|+|+|.+ |.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999975 78887763 123567788888899999999999999 999999999999999965 99999999999975
Q ss_pred CCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh--
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD-- 730 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~-- 730 (845)
.. .........|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++.|.+....++... ..++.+-...+
T Consensus 177 ~~---~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~e---Iik~lG~Pt~e~I 250 (364)
T KOG0658|consen 177 VK---GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVE---IIKVLGTPTREDI 250 (364)
T ss_pred cc---CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHH---HHHHhCCCCHHHH
Confidence 43 222344567889999998876 5899999999999999999999999987655544322 11222111111
Q ss_pred --------hhhccccCCC-----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 731 --------QIMDSNLVGK-----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 731 --------~~~d~~l~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+...+.+... +......+..+++.++++.+|.+|.++.|++.+
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 1111122111 234456778899999999999999999999866
No 173
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-36 Score=339.12 Aligned_cols=256 Identities=22% Similarity=0.245 Sum_probs=200.7
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE 572 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~ 572 (845)
+....++|+..+.||+|+||.||+++.. +++.+|+|.+... .....+.+.+|+.+++.++||||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3344578999999999999999999976 5788999987532 22334568899999999999999999999999999
Q ss_pred EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 573 MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.++||||+++|+|.+++... .+++..+..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+++.
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 99999999999999988543 57889999999999999999999 9999999999999999999999999999976
Q ss_pred CCCCCCcccccccccCCCcCChhhhccC----CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc
Q 003139 653 GPALDQTHVSTAVKGSFGYLDPEYFRRQ----QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM 728 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~ 728 (845)
..... ........||+.|+|||++.+. .++.++||||+||+||||++|+.||......+ .
T Consensus 192 ~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~---------------~ 255 (370)
T cd05621 192 MDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG---------------T 255 (370)
T ss_pred cccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH---------------H
Confidence 43211 1122356799999999998764 37899999999999999999999996543211 1
Q ss_pred hhhhhccccCCCCC--HHHHHHHHHHHHHhhhhCCC--CCCCHHHHHHHH
Q 003139 729 LDQIMDSNLVGKVN--PASLKKFGETAEKCLAEHGV--DRPSMGDVLWNL 774 (845)
Q Consensus 729 ~~~~~d~~l~~~~~--~~~~~~l~~l~~~cl~~~p~--~RPs~~~vl~~L 774 (845)
...+++......++ ......+.+++.+|+..++. .||++.+++++-
T Consensus 256 ~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 256 YSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred HHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 11222211111111 23356677888999975554 388999988763
No 174
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-36 Score=333.77 Aligned_cols=241 Identities=27% Similarity=0.357 Sum_probs=191.7
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHH-HHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIE-MLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.. +|+.+|+|++... .....+++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999865 6899999987543 2233455666665 46779999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++.++..++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~--~~~~~ 153 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA--QSDTT 153 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCC--CCCCc
Confidence 9998888543 478999999999999999999998 9999999999999999999999999999875321 12223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ... .++...+ ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~------~~~---------~~~~~~~--~~~ 216 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE------MYD---------NILHKPL--VLR 216 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH------HHH---------HHHcCCc--cCC
Confidence 45678999999999999999999999999999999999999996533211 111 1111111 112
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+.....+.+++.+|++.+|.+||++++.++
T Consensus 217 ~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 217 PGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred CCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 234566789999999999999998864433
No 175
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.2e-36 Score=336.61 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=200.3
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----cEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-----EMI 574 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 574 (845)
+|+..+.||+|+||.||++... +|+.||+|++... .....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778889999999999999864 7899999987643 3344577889999999999999999999998776 789
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+|+||+. ++|.+.+... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 5777776433 468999999999999999999999 899999999999999999999999999997643
Q ss_pred CCCCcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh---
Q 003139 655 ALDQTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD--- 730 (845)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~--- 730 (845)
.. .........++..|+|||.+.+. .++.++|||||||++|||++|+.||....+.+..... ..........
T Consensus 155 ~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i---~~~~g~~~~~~~~ 230 (372)
T cd07853 155 PD-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLI---TDLLGTPSLEAMR 230 (372)
T ss_pred cC-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHH---HHHcCCCCHHHHH
Confidence 21 12222344678899999998874 5799999999999999999999999765443221111 0100000000
Q ss_pred --------hhhccccC-------CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 731 --------QIMDSNLV-------GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 731 --------~~~d~~l~-------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.+...... ..........+.+++.+||+.||++|||+.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 00000000 011122356788999999999999999999998764
No 176
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-35 Score=319.12 Aligned_cols=257 Identities=24% Similarity=0.375 Sum_probs=205.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
.+|+..+.||+|+||.||+|.+. +|. .+++|...... .....++.+|+.++++++||||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45677889999999999999865 333 58999876553 4456789999999999999999999999987 78999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 999999999999986543 358999999999999999999998 9999999999999999999999999999986543
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||.+....++.++||||||+++|||++ |+.||......+ +..... .+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~-~~------- 227 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE------IPDLLE-KG------- 227 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHh-CC-------
Confidence 222211222334568999999998899999999999999999998 999986543211 111111 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
.....+..+...+.+++.+||..+|.+||++.++++.|+.+.+
T Consensus 228 --~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 228 --ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0111222344578899999999999999999999999998755
No 177
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7.2e-36 Score=323.87 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=202.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-----------------CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-----------------DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSL 563 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-----------------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l 563 (845)
++|+..+.||+|+||.||++... ++..+|+|..... .....++|.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888889999999999998532 2346899988654 34456789999999999999999999
Q ss_pred EEEEecCCcEEEEEEeccCCCccccccCCC---------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcE
Q 003139 564 IGYCDERSEMILVYEYMANGPLRSHLYGTD---------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNI 634 (845)
Q Consensus 564 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NI 634 (845)
++++...+..++||||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 999999999999999999999999886432 1247889999999999999999998 8999999999999
Q ss_pred EECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc--CCCCCCCCCCcc
Q 003139 635 LLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC--TRPALNPVLPRE 712 (845)
Q Consensus 635 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt--g~~p~~~~~~~~ 712 (845)
|+++++.+||+|||+++...............++..|++||....+.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999976432221111222344678999999988899999999999999999998 667775432221
Q ss_pred cccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 713 QVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 713 ~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.............. ......+..++..+.+++.+||+.+|.+||++.+|++.|+
T Consensus 242 ---~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 242 ---VIENTGEFFRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ---HHHHHHHHHhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111111111000 0001112334578899999999999999999999999886
No 178
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-36 Score=331.51 Aligned_cols=242 Identities=24% Similarity=0.337 Sum_probs=195.7
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|... +++.+|+|.+... .....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999876 5788999987643 233456678899999888 799999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++.++..++.|++.||.|||+ .+|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL--GGVTT 153 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCc--CCCcc
Confidence 9999888543 469999999999999999999998 9999999999999999999999999999875221 11122
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....|+..|+|||++.+..++.++|||||||++|||++|+.||......+ .... +..... .++
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~------~~~~---------i~~~~~--~~~ 216 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE------LFQS---------ILEDEV--RYP 216 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH------HHHH---------HHcCCC--CCC
Confidence 34568999999999999999999999999999999999999996433211 1111 111111 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCH-----HHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSM-----GDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~-----~~vl~~ 773 (845)
......+.+++.+||+.+|.+||++ .+++++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 217 RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 3345678899999999999999999 776643
No 179
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1e-35 Score=314.23 Aligned_cols=247 Identities=28% Similarity=0.436 Sum_probs=199.7
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
+||+|+||.||++...+++.+++|+...... ...+.+.+|++++++++|+||+++++++.+....++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 6999999999999987789999998765433 356789999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccccc
Q 003139 588 HLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKG 667 (845)
Q Consensus 588 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g 667 (845)
++.... ..+++..++.++.+++.||+|||+ ++++||||||+|||+++++.+||+|||+++................
T Consensus 82 ~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 82 FLRKKK-NRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 986543 368899999999999999999998 8999999999999999999999999999976432111111112233
Q ss_pred CCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHH
Q 003139 668 SFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASL 746 (845)
Q Consensus 668 t~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 746 (845)
+..|+|||.+.++.++.++||||||++++||++ |..||....... ... .++.......+...+
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~-------------~~~~~~~~~~~~~~~ 221 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRE-------------RIESGYRMPAPQLCP 221 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHH-------------HHhcCCCCCCCccCC
Confidence 567999999998999999999999999999999 777775433211 000 011111111233456
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 747 KKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 747 ~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
..+.+++.+|+..+|.+||++.|+++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 68999999999999999999999999875
No 180
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-37 Score=335.02 Aligned_cols=250 Identities=25% Similarity=0.372 Sum_probs=209.6
Q ss_pred cceeeeeeceEEEEEEEEc--CCc--EEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 506 ESLLLGVGGFGRVYKGTLD--DGT--KVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~--~g~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
..++||+|.||.|++|.|. +|+ .||||.+...... ...+|++|+.+|.+|+|+|+++|+|+..+ ....||+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 3457999999999999986 344 5899998876544 67899999999999999999999999987 7889999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
+.|+|.+.|++.....|-...+..++.|||.||.||.. +++|||||..+|+||-....+||+||||.|.....++.+
T Consensus 193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 99999999988666788889999999999999999998 999999999999999999999999999999866544433
Q ss_pred c-ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCC-CCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 661 V-STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTR-PALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 661 ~-~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
. ....+-.+.|+|||.++.+.++.+||||+|||.||||+++. .||-+..... +.+.+|....
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------------IL~~iD~~er 333 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------------ILKNIDAGER 333 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------------HHHhcccccc
Confidence 3 23445677899999999999999999999999999999854 5664433211 2233343333
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
-..++.|++.+.++++.||..+|++||++.+|.+.+-
T Consensus 334 LpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 334 LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 3456789999999999999999999999999985543
No 181
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-35 Score=319.67 Aligned_cols=250 Identities=23% Similarity=0.295 Sum_probs=199.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..++||+|+||.||+|... +++.+|+|..... .....+++.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 5677889999999999999864 6888999987543 3445567999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|..+. .+++..+..++.|++.||+|||+ .+|+|+||||+|||++.++.+||+|||++..... .
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~----~ 148 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN----S 148 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceeccc----c
Confidence 999986542 47888999999999999999999 9999999999999999999999999999975322 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc-HHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN-IAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......|+..|+|||++.+..++.++||||||+++|||++|+.||.......... ...+.. .+.+.....
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 219 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQ---------CIVDEDPPV 219 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHH---------HHhccCCCC
Confidence 2234578899999999999999999999999999999999999986533222111 111111 111111111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.........+.+++.+|++.+|++||++++++++.
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 11122345688999999999999999999998764
No 182
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-36 Score=324.16 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=204.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.+|+..+.||+|+||.||+|... +++.+++|.+........+.+.+|+++++.++|+||+++++.+......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888889999999999999864 68899999887665555678899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.. ..+++.+++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 100 ~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--~ 171 (296)
T cd06654 100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 171 (296)
T ss_pred CCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc--c
Confidence 99999998853 358999999999999999999998 899999999999999999999999999987533211 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......+++.|+|||.+.+..++.++|||||||++|||++|+.||....+... + ......+ .....
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-----~-~~~~~~~--------~~~~~ 237 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-----L-YLIATNG--------TPELQ 237 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-----H-HHHhcCC--------CCCCC
Confidence 12334688899999999998999999999999999999999999965432211 1 1110100 00001
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+......+.+++.+||..+|++||++.++++.
T Consensus 238 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 238 NPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 123445678899999999999999999999874
No 183
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.6e-36 Score=321.13 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=200.8
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
|+..+.||+|+||+||+|... +++.+|+|.+.... ....+.+.+|++++++++|+|++++.+.+..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999875 68899999876432 22345678899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.......+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 155 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--- 155 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC---
Confidence 999999988865555579999999999999999999998 89999999999999999999999999998653321
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......|+..|+|||.+.+..++.++|+|||||++|||++|+.||........ ...+.. .+.+.. .
T Consensus 156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~--~~~~~~---------~~~~~~--~ 222 (285)
T cd05632 156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK--REEVDR---------RVLETE--E 222 (285)
T ss_pred CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH---------hhhccc--c
Confidence 112345689999999999999999999999999999999999999975432211 111100 011100 1
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~ 773 (845)
.+.......+.+++.+|++.+|++||+ +.+++.+
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 223 VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 122344567789999999999999999 5566554
No 184
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.5e-36 Score=340.84 Aligned_cols=253 Identities=21% Similarity=0.268 Sum_probs=197.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|++.+.||+|+||.||+++.. +++.+|+|.+.... ....+.+.+|++++++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36888999999999999999865 68899999875432 223466889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999998543 468889999999999999999999 999999999999999999999999999975211000
Q ss_pred -----------------------------------------CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHH
Q 003139 658 -----------------------------------------QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLM 696 (845)
Q Consensus 658 -----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ 696 (845)
.........||+.|||||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000112357999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCC---CHHHHHHH
Q 003139 697 EVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRP---SMGDVLWN 773 (845)
Q Consensus 697 Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP---s~~~vl~~ 773 (845)
||++|+.||....+.+. ........ ..+...........+.+++.+|+ .+|.+|+ ++.+++++
T Consensus 236 ell~G~~Pf~~~~~~~~------~~~i~~~~-------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTPAET------QLKVINWE-------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCHHHH------HHHHhccC-------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999975443221 11100000 00000011123455667777766 5999999 88888766
No 185
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=9.8e-37 Score=334.25 Aligned_cols=238 Identities=24% Similarity=0.315 Sum_probs=193.3
Q ss_pred eeeeeeceEEEEEEEE----cCCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 508 LLLGVGGFGRVYKGTL----DDGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~----~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
+.||+|+||.||+++. .+|+.+|+|++.... ......+..|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4799999999999875 357899999876432 2234567789999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+|+|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~ 154 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH--EKK 154 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--CCc
Confidence 99999988543 468999999999999999999999 99999999999999999999999999999763321 122
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||......+ ... .+.... ..+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~------~~~---------~i~~~~--~~~ 217 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE------TMT---------MILKAK--LGM 217 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH------HHH---------HHHcCC--CCC
Confidence 234678999999999999999999999999999999999999996532211 111 111111 112
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGD 769 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~ 769 (845)
+......+.+++.+||+.+|++||++.+
T Consensus 218 p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 218 PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 3344567889999999999999999555
No 186
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.6e-36 Score=329.38 Aligned_cols=241 Identities=24% Similarity=0.337 Sum_probs=192.3
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|... +++.||+|.+.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999976 57889999876431 23345667788888764 899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|.+++... ..+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENML--GDAKT 153 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCC--CCCce
Confidence 9999988543 468999999999999999999998 8999999999999999999999999999875221 11122
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||..|+|||++.+..++.++|||||||++|||++|+.||......+ +.. . .... .+ .++
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~---~-i~~~------~~----~~~ 216 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQ---S-IRMD------NP----CYP 216 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHH---H-HHhC------CC----CCC
Confidence 34578999999999999999999999999999999999999996543211 111 1 0000 01 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH-HHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG-DVLW 772 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~-~vl~ 772 (845)
......+.+++.+||+.+|++||++. ++++
T Consensus 217 ~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 217 RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 23445678999999999999999997 5543
No 187
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.3e-35 Score=314.67 Aligned_cols=248 Identities=27% Similarity=0.376 Sum_probs=197.4
Q ss_pred eeeeeeceEEEEEEEEcC----CcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLDD----GTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+... +..+|+|....... ...+++.+|+++++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 369999999999997542 26799998775543 34578999999999999999999999876 4568999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc-c
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH-V 661 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~-~ 661 (845)
|+|.+++.... .+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++......... .
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999996543 78999999999999999999998 899999999999999999999999999998643222111 1
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .+..+.. ... ...
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~----~~~---------~~~ 218 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLE----SGE---------RLP 218 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHH----cCC---------cCC
Confidence 112234567999999999999999999999999999998 99998654321 1111111 110 011
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.+...+..+.+++.+||..+|++||++.++++.|+..
T Consensus 219 ~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 219 RPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 2234456788999999999999999999999999865
No 188
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.5e-35 Score=314.92 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=195.1
Q ss_pred eeeeeeceEEEEEEEEc----CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEe-cCCcEEEEEEecc
Q 003139 508 LLLGVGGFGRVYKGTLD----DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCD-ERSEMILVYEYMA 581 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~-~~~~~~lV~Ey~~ 581 (845)
+.||+|+||.||+|.+. ++..+|+|+.... .....+.+.+|+.+++.++||||++++++|. .++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999864 2356999987543 3455678899999999999999999999875 4556899999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC--c
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ--T 659 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~--~ 659 (845)
+|+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++....... .
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999986442 357888899999999999999998 8999999999999999999999999999975332111 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCC-CCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTR-PALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
.......++..|+|||.+.+..++.++|||||||++|||++|+ +|+..... .+......... .
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~~~~----------~ 220 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS------FDITVYLLQGR----------R 220 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhcCC----------C
Confidence 1112345677899999999999999999999999999999964 55543221 11111111110 0
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
...+...+..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus 221 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 221 LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0112223567889999999999999999999999998764
No 189
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.8e-36 Score=329.16 Aligned_cols=240 Identities=23% Similarity=0.325 Sum_probs=192.3
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.. +|+.||+|.+.... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999976 68899999876431 23345667788888764 899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++.++..++.|+++||+|||+ ++|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~ 153 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF--GDNRA 153 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeeccc--CCCce
Confidence 9999888543 468999999999999999999999 9999999999999999999999999999874221 11223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ + ... ...+ . ...+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~---~~~-~~~~------~----~~~~ 216 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---L---FES-IRVD------T----PHYP 216 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---H---HHH-HHhC------C----CCCC
Confidence 45678999999999999999999999999999999999999996543211 1 111 1100 0 1122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHH-HHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMG-DVL 771 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~-~vl 771 (845)
......+.+++.+||+.||++||++. +++
T Consensus 217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 217 RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 23456788999999999999999985 554
No 190
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.6e-36 Score=329.60 Aligned_cols=242 Identities=24% Similarity=0.355 Sum_probs=195.0
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 577 (845)
+|+..+.||+|+||.||+|... +|+.||+|++... .....+.+..|.+++..+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999865 6889999987643 2334566788999998885 577888999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++.+++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~-- 153 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV-- 153 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccCC--
Confidence 999999999988543 469999999999999999999998 8999999999999999999999999999875322
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.........||+.|+|||++.++.++.++|||||||++|||++|+.||....... + ...+.....
T Consensus 154 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~------------~~~i~~~~~ 218 (323)
T cd05615 154 DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE---L------------FQSIMEHNV 218 (323)
T ss_pred CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH---H------------HHHHHhCCC
Confidence 1112234568999999999999999999999999999999999999997543211 1 111111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
..+......+.+++.+||+.+|.+|++..
T Consensus 219 --~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 219 --SYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred --CCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 12334456788999999999999999853
No 191
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.8e-36 Score=325.15 Aligned_cols=264 Identities=24% Similarity=0.318 Sum_probs=204.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|++.+.||+|+||.||++... ++..+++|..... .....+++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888999999999999999876 5788899987644 344456788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+++..+..++.|+++||.|||+ ..+++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 9999999998644 468999999999999999999997 25899999999999999999999999999875322
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC------------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG------------ 727 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~------------ 727 (845)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....... ...+........
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 153 SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCC
Confidence 11234568899999999988889999999999999999999999986433211 111000000000
Q ss_pred --------chhhhhccccC---CCCC-HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 728 --------MLDQIMDSNLV---GKVN-PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 728 --------~~~~~~d~~l~---~~~~-~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
...+..+.... ...+ ......+.+++.+||+.+|++||++.+++++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00000000000 0011 1234568899999999999999999999887554
No 192
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-35 Score=322.92 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=203.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
++|+..+.||+|+||.||+|.+. +|. .+|+|...... .....++.+|+.++++++||||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45777889999999999999864 444 47888876543 33345789999999999999999999999754 5779
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
++||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999998644 2368999999999999999999998 8999999999999999999999999999986433
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ..++. ..+.
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~------ 228 (303)
T cd05110 162 DEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLL----EKGE------ 228 (303)
T ss_pred cccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH----HCCC------
Confidence 222212223445678999999999999999999999999999997 888885432111 11111 1110
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhhc
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEE 782 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~~ 782 (845)
....+..+...+.+++.+||..+|++||++.++++.|+.+...+.
T Consensus 229 ---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 229 ---RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 011122344578899999999999999999999999998755433
No 193
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.6e-35 Score=316.58 Aligned_cols=256 Identities=25% Similarity=0.347 Sum_probs=204.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC----CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD----GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
++|...+.||+|+||.||+|...+ ...+++|...... .+..+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457778899999999999998643 2468999876554 5566789999999999999999999999875 567899
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 99999999999986532 368999999999999999999998 89999999999999999999999999999764332
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.........++..|+|||.+....++.++||||||++++||++ |+.||......+ ...+ . ..+.
T Consensus 161 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~---~-~~~~------- 225 (270)
T cd05056 161 -SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---VIGR---I-ENGE------- 225 (270)
T ss_pred -cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHH---H-HcCC-------
Confidence 1111223334568999999998899999999999999999986 999986543221 1111 1 1110
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
....+..++..+.+++.+|+..+|.+||++.++++.|+.+..
T Consensus 226 --~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 226 --RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 001223455678999999999999999999999999998754
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=9.9e-36 Score=320.31 Aligned_cols=251 Identities=26% Similarity=0.391 Sum_probs=201.7
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
|++.+.||+|+||.||+|... ++..+++|..........+.+.+|+++++.++|||++++++++...+..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 455668999999999999976 4778899988777777778899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
++|..++... ..++++..+..++.|+++||+|||+ .+++||||||+|||++.++.+||+|||+++.... .....
T Consensus 87 ~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~--~~~~~ 160 (282)
T cd06643 87 GAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR--TIQRR 160 (282)
T ss_pred CcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccc--ccccc
Confidence 9998887543 3479999999999999999999999 8999999999999999999999999999875332 11122
Q ss_pred cccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 663 TAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
....++..|+|||++. +..++.++|||||||++|||++|++||......+. ....... . .+.+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~~~~~-~-----~~~~ 228 (282)
T cd06643 161 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV------LLKIAKS-E-----PPTL 228 (282)
T ss_pred ccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH------HHHHhhc-C-----CCCC
Confidence 3456889999999984 45678899999999999999999999865332111 1111000 0 0011
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..+......+.+++.+||+.+|.+||++.+++++-
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred --CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 11223456788999999999999999999987653
No 195
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.1e-36 Score=321.16 Aligned_cols=270 Identities=27% Similarity=0.400 Sum_probs=206.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-----CCcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-----DGTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEMI 574 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~ 574 (845)
.|+..+.||+|+||.||+|++. .+..+|+|.+...... ..++|.+|++++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR 84 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence 4666788999999999999864 3678999988765443 56789999999999999999999999977 56789
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+||||+++++|.+++.... ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 85 lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 85 LIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999996543 369999999999999999999998 899999999999999999999999999998754
Q ss_pred CCCCcc-cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 655 ALDQTH-VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 655 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
...... ......++..|+|||.+.+..++.++||||||++++||++|+.|+............. .........+.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQGQMIVTRLLELL 239 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-ccccccHHHHHHHH
Confidence 221111 1112344567999999998999999999999999999999998875432211000000 00000000011111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
........+..++..+.+++.+||+.+|++||++.||+++|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 240 KEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111122234457799999999999999999999999999865
No 196
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.3e-35 Score=314.03 Aligned_cols=250 Identities=26% Similarity=0.390 Sum_probs=204.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|+..+.||+|+||.||+|...+ ++.+++|.+..... .+++.+|++++++++|+||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 568888899999999999999874 78999998765433 678999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||++....... .
T Consensus 81 ~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--~ 154 (256)
T cd06612 81 GAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--A 154 (256)
T ss_pred CCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCc--c
Confidence 9999999985433 578999999999999999999998 899999999999999999999999999987643321 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+....+..... .... ...+. ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-------~~~~-----~~~~~--~~ 220 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-------MIPN-----KPPPT--LS 220 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-------hhcc-----CCCCC--CC
Confidence 2233457889999999999999999999999999999999999987543322110 0000 00000 11
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+......+.+++.+|++.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 221 DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 123345678999999999999999999999863
No 197
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.3e-36 Score=323.27 Aligned_cols=261 Identities=25% Similarity=0.329 Sum_probs=194.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhC---CCCCcceEEEEEec-----CC
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKL---RHRHLVSLIGYCDE-----RS 571 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~-----~~ 571 (845)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ......+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778889999999999999876 68899999876432 11223455677777665 79999999998854 34
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
..++||||++ ++|.+++.......+++.++..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999997 588888866555568999999999999999999999 899999999999999999999999999997
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
.... ........|+..|+|||++.+..++.++|||||||++|||++|++||......+. +.... ..........
T Consensus 157 ~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~--~~~~~-~~~~~~~~~~ 230 (288)
T cd07863 157 IYSC---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ--LGKIF-DLIGLPPEDD 230 (288)
T ss_pred cccC---cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH--HHHHH-HHhCCCChhh
Confidence 6432 1222345678999999999999999999999999999999999999865432211 11100 0000000000
Q ss_pred ----------hhcccc---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 732 ----------IMDSNL---VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 732 ----------~~d~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+.. .....+.....+.+++.+||+.||++||++.|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 231 WPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 001112345678899999999999999999998753
No 198
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.5e-36 Score=321.22 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=204.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-----CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-----DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 573 (845)
..|.+.+.||+|+||.||+++++ ++..+|+|.+.... ....+.+.+|++++++++|||++++.+++.+. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 34677889999999999999742 47789999987553 44557899999999999999999999999775 568
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++++|.+++.... ..++|.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999985432 368999999999999999999998 99999999999999999999999999999864
Q ss_pred CCCCCc-ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc---------ccccHHHHHHHH
Q 003139 654 PALDQT-HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR---------EQVNIAEWAMTW 723 (845)
Q Consensus 654 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~---------~~~~l~~~~~~~ 723 (845)
...... .......++..|+|||++.+..++.++||||||+++|||++++.|....... .+.....+.. .
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 238 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR-V 238 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH-H
Confidence 322111 1122345677899999999989999999999999999999988654321100 0111111111 1
Q ss_pred hhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 724 QKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
...+ .....+...+..+.+++.+||+.+|.+||++.++++.|+.+
T Consensus 239 ~~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 239 LEEG---------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHcC---------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1111 11112234567899999999999999999999999999875
No 199
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.5e-35 Score=313.90 Aligned_cols=251 Identities=31% Similarity=0.463 Sum_probs=201.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
.+|+..+.||+|+||.||+|.+.++..+++|.+..... ...+|.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 35777889999999999999987788899998764432 23578899999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++..... ....
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~-~~~~ 157 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD-QYTS 157 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccC-cccc
Confidence 999999886443 468999999999999999999998 89999999999999999999999999998753321 1111
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....++.+|+|||.+.++.++.++||||||+++|||++ |+.||......+ ..... .++ ....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~~-~~~--~~~~------- 221 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE------VVETI-NAG--FRLY------- 221 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH------HHHHH-hCC--CCCC-------
Confidence 223335678999999998999999999999999999998 888886433211 11111 110 0001
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 222 ~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 222 KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1122346788999999999999999999999876
No 200
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.6e-36 Score=318.58 Aligned_cols=248 Identities=29% Similarity=0.444 Sum_probs=197.3
Q ss_pred eeeeeceEEEEEEEEcC-------CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 509 LLGVGGFGRVYKGTLDD-------GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.||+|+||.||+|+..+ ++.+++|...... .....+|.+|+++++.++||||++++++|...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 68999999999998642 2578999765433 344678899999999999999999999999999999999999
Q ss_pred cCCCccccccCC-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-----ceEEEecccc
Q 003139 581 ANGPLRSHLYGT-----DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-----VAKVADFGLS 650 (845)
Q Consensus 581 ~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-----~~kl~DFGla 650 (845)
++++|.+++... ....++|.+++.++.|++.||+|||+ .+++|+||||+||+++.+. .+||+|||++
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999998643 22348899999999999999999998 8999999999999999877 8999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
+...............++..|+|||++.++.++.++|||||||++|||++ |+.||......+ . .... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~---~~~~-~~--- 228 (269)
T cd05044 159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---V---LQHV-TA--- 228 (269)
T ss_pred cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---H---HHHH-hc---
Confidence 75432222122223345678999999999999999999999999999998 998885432211 1 1111 11
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 730 DQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
......+...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus 229 ------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 ------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0111123345677889999999999999999999999886
No 201
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.1e-35 Score=316.52 Aligned_cols=238 Identities=24% Similarity=0.376 Sum_probs=189.3
Q ss_pred eeeeeceEEEEEEEEcC-------------CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 509 LLGVGGFGRVYKGTLDD-------------GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
.||+|+||.||+|++.. ...+++|.+..........|.+|+.++++++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 68999999999998542 22588998776655566788999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc-------eEEEecc
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV-------AKVADFG 648 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~-------~kl~DFG 648 (845)
||||+++|+|..++... ...+++..+++++.|+++||+|||+ .+|+||||||+|||++.++. +|++|||
T Consensus 82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 82 VEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999887543 3468999999999999999999998 99999999999999987664 8999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhc-cCCCCchhHHHHHHHHHHHHH-cCCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFR-RQQLTEKSDVYSFGVVLMEVL-CTRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~S~Gvvl~Ell-tg~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
++..... .....++..|+|||.+. +..++.++|||||||++|||+ .|+.|+......+. . ....
T Consensus 158 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~------~-~~~~- 223 (262)
T cd05077 158 IPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK------E-RFYE- 223 (262)
T ss_pred CCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH------H-HHHh-
Confidence 9865321 12345778899999887 567899999999999999998 57777653221110 0 0000
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.... ........+.+++.+||+.+|.+||++.+|++.|
T Consensus 224 --------~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 --------GQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------cCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0000 1112245688999999999999999999999876
No 202
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.6e-35 Score=316.30 Aligned_cols=251 Identities=21% Similarity=0.308 Sum_probs=190.0
Q ss_pred eeeeeceEEEEEEEEcC---CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCC
Q 003139 509 LLGVGGFGRVYKGTLDD---GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~---g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
.||+|+||.||+|...+ ...+++|.+... .......|.+|++.++.++|+||+++++.|.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 346888876544 33445678999999999999999999999999999999999999999
Q ss_pred ccccccCCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 585 LRSHLYGTD---LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 585 L~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
|.+++.... ....++...+.++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999986542 2335688889999999999999999 8999999999999999999999999999875332111111
Q ss_pred ccccccCCCcCChhhhcc-------CCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 662 STAVKGSFGYLDPEYFRR-------QQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~-------~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
.....++..|+|||++.. ..++.++|||||||++|||++ |+.||......+ . ........ ...+.
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~---~~~~~~~~-~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ---V---LKQVVREQ-DIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH---H---HHHHhhcc-CccCC
Confidence 223345678999998753 457889999999999999999 677775432211 0 11111111 11111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
++ ..+......+.+++..|+ .+|++||++.+|++.|
T Consensus 232 ~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 232 KP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11 122344566778888888 5999999999999886
No 203
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.6e-35 Score=317.17 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=203.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc------CCcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD------DGTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMI 574 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~ 574 (845)
++|+....||+|+||.||+|+.+ +.+.+++|........ ..+++.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 46788889999999999999864 2456899987665443 5678999999999999999999999999999999
Q ss_pred EEEEeccCCCccccccCCC-------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 575 LVYEYMANGPLRSHLYGTD-------LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
+||||+++|+|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+|||+++++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999986543 1268999999999999999999998 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
|+++..... .........++..|+|||.+.+...+.++||||||++++||++ |..||....... .... ...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~------~~~~-~~~ 233 (275)
T cd05046 162 SLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE------VLNR-LQA 233 (275)
T ss_pred ccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH------HHHH-HHc
Confidence 998753221 1111223356778999999998889999999999999999999 777775322111 1111 111
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+. +....+...+..+.+++.+||+.+|++||++.+++..|.
T Consensus 234 ~~--------~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 GK--------LELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CC--------cCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11 111122345568899999999999999999999998875
No 204
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.6e-36 Score=341.95 Aligned_cols=261 Identities=21% Similarity=0.249 Sum_probs=193.7
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--------C
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--------S 571 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--------~ 571 (845)
.++|...+.||+|+||.||+|... +++.||||++.... ....+|+.+|++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999875 68899999875432 2234799999999999999999876322 2
Q ss_pred cEEEEEEeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-ceEEEecc
Q 003139 572 EMILVYEYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-VAKVADFG 648 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DFG 648 (845)
.+++||||+++ +|.+++.. .....+++..+..++.||+.||+|||+ .+|+||||||+||||+.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46799999975 66665532 234578999999999999999999999 9999999999999999664 79999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
+++..... .......||+.|+|||++.+ ..++.++|||||||+||||++|++||......+.. .. ........
T Consensus 217 la~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~--~~-i~~~~~~p 290 (440)
T PTZ00036 217 SAKNLLAG---QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL--VR-IIQVLGTP 290 (440)
T ss_pred cchhccCC---CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HH-HHHHhCCC
Confidence 99864321 12234568999999999876 46899999999999999999999999765433221 11 11111110
Q ss_pred chhhh---------------hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 MLDQI---------------MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 ~~~~~---------------~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
....+ ....+...++...+..+.+++.+||+.+|.+|||+.|++++-.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 00000 0000111122234467889999999999999999999987643
No 205
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.2e-36 Score=325.96 Aligned_cols=267 Identities=20% Similarity=0.283 Sum_probs=199.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|...+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888889999999999999876 67889999876443 22334678899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++ +|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+|||+++..... .
T Consensus 86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~ 158 (309)
T cd07872 86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP--T 158 (309)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC--c
Confidence 975 7877775432 458899999999999999999998 99999999999999999999999999999753221 1
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH---------HHhhcCch
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM---------TWQKKGML 729 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~---------~~~~~~~~ 729 (845)
.......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+......... ........
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 159 KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhh
Confidence 11223467889999998865 568999999999999999999999997554332211111000 00000000
Q ss_pred hhhhccccCC----CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 730 DQIMDSNLVG----KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 730 ~~~~d~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
...-.+.... ...+.....+.+++.+||+.||.+|||+.|++++-.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 239 KNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 0000000000 011223456789999999999999999999987543
No 206
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.9e-35 Score=313.03 Aligned_cols=251 Identities=24% Similarity=0.320 Sum_probs=205.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||.|+||.||.++.. +++.+++|++... +....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4778889999999999998854 6888999986543 355567889999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.......+++.++..++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-- 155 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-- 155 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccccc--
Confidence 999999999976545678999999999999999999998 899999999999999999999999999997643322
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||......+ ...... .... .
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~---------~~~~-~ 219 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKIV---------QGNY-T 219 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHH---------cCCC-C
Confidence 12234568899999999998889999999999999999999999986433211 111111 1111 1
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.........+.+++.+||+.+|++||++.++++++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11234456788999999999999999999998753
No 207
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.8e-36 Score=330.58 Aligned_cols=241 Identities=25% Similarity=0.337 Sum_probs=190.6
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHH-HHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIE-MLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|+.. +++.+|+|.+.... .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999976 57789999875432 222334444544 56788999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|.+++... ..+++.....++.||++||+|||+ .+|+||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~--~~~~~ 153 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE--HNGTT 153 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccccc--CCCCc
Confidence 9999988543 467888899999999999999999 9999999999999999999999999999975322 12223
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +....+ ...
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------~~~~---------i~~~~~--~~~ 216 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE------MYDN---------ILNKPL--QLK 216 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH------HHHH---------HHhCCc--CCC
Confidence 45679999999999999999999999999999999999999996533211 1111 111111 122
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+.....+.+++.+|++.+|.+||++.+.+.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 217 PNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 344567889999999999999999875443
No 208
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=338.10 Aligned_cols=254 Identities=25% Similarity=0.378 Sum_probs=212.7
Q ss_pred CcceeeeeeceEEEEEEEEc-CCc----EEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTLD-DGT----KVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~-~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
...++||+|+||+||||.+- .|+ +||+|.+... +.+...+++.|...|.+++||||++|+|+|.... +.||.+
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 44668999999999999863 443 5888876554 4556789999999999999999999999997765 889999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|||.|+|.++++..+ ..+--+..+.|+.|||+||.|||+ ++++||||.++|||+.+...+||.|||+++.......
T Consensus 778 ~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999997653 578889999999999999999998 9999999999999999999999999999998776555
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.......+-.+.|||-|.++...++.++|||||||.+||++| |..|++.....+ +.++++...
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------------I~dlle~ge 917 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------------IPDLLEKGE 917 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------------hhHHHhccc
Confidence 555555566788999999999999999999999999999997 788887654433 222222222
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+-..++.+...+..++.+||..|+..||+++++...+.....
T Consensus 918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 234567788889999999999999999999999888766543
No 209
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-35 Score=336.02 Aligned_cols=262 Identities=23% Similarity=0.223 Sum_probs=196.5
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
...|.+.+.||+|+||.||++.+. .++.||||.... ..+.+|+++|++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346888999999999999999976 578899996432 3457899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+. ++|..++... ...++|.+++.|+.|+++||+|||+ .+|+||||||+||||+.++.+||+|||+++........
T Consensus 242 ~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 YR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred cC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 94 7888887543 2479999999999999999999998 89999999999999999999999999999764332222
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc-cc----ccHHHHHHHHhhc-Cch----
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR-EQ----VNIAEWAMTWQKK-GML---- 729 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~-~~----~~l~~~~~~~~~~-~~~---- 729 (845)
.......||..|+|||++.+..++.++|||||||+||||++|..++...... .. ..+...+...... ...
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 2233467999999999999999999999999999999999988665332111 10 1111111110000 000
Q ss_pred ----h-hhhc---cccCCCCC-------HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 ----D-QIMD---SNLVGKVN-------PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ----~-~~~d---~~l~~~~~-------~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
. .... ........ ......+.+++.+||+.||.+|||+.|++++
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 0000 00000000 0122367889999999999999999999876
No 210
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.5e-36 Score=319.29 Aligned_cols=238 Identities=26% Similarity=0.393 Sum_probs=188.7
Q ss_pred eeeeeceEEEEEEEEcC-------------------------CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceE
Q 003139 509 LLGVGGFGRVYKGTLDD-------------------------GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSL 563 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 563 (845)
+||+|+||.||+|.+.. ...|++|.+.........+|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997521 13488898876555556788999999999999999999
Q ss_pred EEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC---
Q 003139 564 IGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF--- 640 (845)
Q Consensus 564 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~--- 640 (845)
+++|.+....++||||+++|+|..++... ...+++..+++++.|+++||+|||+ .+|+||||||+|||+++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999888643 3468999999999999999999998 8999999999999997643
Q ss_pred ----ceEEEeccccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHH-cCCCCCCCCCCcccc
Q 003139 641 ----VAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVL-CTRPALNPVLPREQV 714 (845)
Q Consensus 641 ----~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Ell-tg~~p~~~~~~~~~~ 714 (845)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.|+....+.+.
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~- 230 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK- 230 (274)
T ss_pred CccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH-
Confidence 4899999998643211 12346788999998875 56899999999999999995 78888865433221
Q ss_pred cHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 715 NIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 715 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..+ ... .. ..+......+.+++.+||+.+|++||++.+|++.|
T Consensus 231 --~~~----~~~---------~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 --ERF----YEK---------KH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred --HHH----HHh---------cc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 010 000 00 01112234688999999999999999999999886
No 211
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.1e-35 Score=314.57 Aligned_cols=251 Identities=23% Similarity=0.418 Sum_probs=201.6
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
+|...+.||+|+||.||+|...+++.+|+|.+.... ....+.+.+|++++++++|+||++++++|.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 366778999999999999998889999999765431 23346688999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
+||+++++|.+++... .++++..+..++.|++.||+|||+ .+|+|+||||+||++++++.+||+|||+++.....
T Consensus 81 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 9999999999998543 468899999999999999999998 89999999999999999999999999998753211
Q ss_pred C----CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 657 D----QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 657 ~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
. .........++..|+|||++.+..++.++||||||++++||++|+.||......+. ........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~~~~~~~~------ 224 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----MFYIGAHR------ 224 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----HHHhhhcc------
Confidence 1 11122345688999999999999999999999999999999999999964322111 00000000
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
......+......+.+++.+||+.+|.+||++.+++.
T Consensus 225 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 ---GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0111223345567889999999999999999999875
No 212
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.7e-36 Score=335.48 Aligned_cols=253 Identities=21% Similarity=0.308 Sum_probs=196.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||++... +++.+|+|.+... .....+.+..|+.++.+++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36788899999999999999876 6889999987542 2334567888999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||||+.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999998543 468999999999999999999998 999999999999999999999999999987432110
Q ss_pred C---------------------------------cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCC
Q 003139 658 Q---------------------------------THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPA 704 (845)
Q Consensus 658 ~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p 704 (845)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 0011235799999999999999999999999999999999999999
Q ss_pred CCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC---HHHHHHH
Q 003139 705 LNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS---MGDVLWN 773 (845)
Q Consensus 705 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs---~~~vl~~ 773 (845)
|....+.+. ....... ...+.-.........+.+++.+|+. +|.+|++ +.+++++
T Consensus 236 f~~~~~~~~------~~~i~~~-------~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETPQET------YRKVMNW-------KETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCHHHH------HHHHHcC-------CCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 975443221 1111000 0000000001134567778888764 9999985 5665544
No 213
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.9e-36 Score=315.56 Aligned_cols=253 Identities=30% Similarity=0.470 Sum_probs=200.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHH--HHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIA--EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|+..+.||+|+||.||+++.. +++.+|+|........... ....|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 456789999999999999987 4668999998776544332 3456999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++. ....+++.+++.++.|+++||++||+ .+++|+||||+||++++++.++|+|||.+.... ....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNE 153 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTS
T ss_pred cccccccccc--cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--cccc
Confidence 9999999996 33468999999999999999999999 899999999999999999999999999987531 2222
Q ss_pred cccccccCCCcCChhhhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 661 VSTAVKGSFGYLDPEYFR-RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......++..|+|||++. +..++.++||||+|++++||++|+.|+........... ....... .......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~---~~~~~~~----~~~~~~~-- 224 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI---IEKILKR----PLPSSSQ-- 224 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH---HHHHHHT----HHHHHTT--
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh---hhhcccc----ccccccc--
Confidence 344567889999999998 88999999999999999999999999875411111111 1110000 0000000
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
........+.+++.+||+.+|++||++.+++++
T Consensus 225 -~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 225 -QSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp -SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred -ccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001113789999999999999999999999753
No 214
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.4e-36 Score=312.07 Aligned_cols=262 Identities=24% Similarity=0.308 Sum_probs=199.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChH--hHHHHHHHHHHHHhCCCCC-cceEEEEEecCC------c
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQ--GIAEFRTEIEMLSKLRHRH-LVSLIGYCDERS------E 572 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~------~ 572 (845)
.|+..++||+|+||.||+|+.. +|+.||+|++....++ .-....+|+.++++++|+| |++|.+++...+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 3444557999999999999965 7899999987765432 2234578999999999999 999999998777 7
Q ss_pred EEEEEEeccCCCccccccCCCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 573 MILVYEYMANGPLRSHLYGTDL--PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
+++|+||+ ..+|..++..... ..++-..+..+..|+++||+|||+ ++|+||||||+||||+++|.+||+|||+|
T Consensus 92 l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 92 LYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred EEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999 4688888865432 356778899999999999999999 99999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc-
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM- 728 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~- 728 (845)
+...- .....+...+|..|+|||++.+. .|+...||||+|||+.||+++++.|.+..+.++... +........
T Consensus 168 ra~~i--p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~---If~~lGtP~e 242 (323)
T KOG0594|consen 168 RAFSI--PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR---IFRLLGTPNE 242 (323)
T ss_pred HHhcC--CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH---HHHHcCCCCc
Confidence 96432 22224567889999999999876 799999999999999999999999887665433211 111111000
Q ss_pred -----hhhhhccc----------cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 729 -----LDQIMDSN----------LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 729 -----~~~~~d~~----------l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+..+.+-. .....-+.......+++.+||+.+|.+|.|+..++++
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00000000 0000001112467899999999999999999998876
No 215
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3e-35 Score=311.64 Aligned_cols=250 Identities=25% Similarity=0.373 Sum_probs=202.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec-CCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE-RSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~~~~lV~E 578 (845)
+|+..+.||+|++|.||+++.. +++.+++|++... .....+.+.+|++++++++|+|++++++.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778889999999999999875 5788999987543 34456678899999999999999999998764 446789999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++++|.+++.......+++.++.+++.|++.||++||+ .+++||||||+||++++++.++|+|||+++.... .
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~--~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN--Q 155 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecc--c
Confidence 9999999999876555578999999999999999999998 8999999999999999999999999999976432 1
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
........+++.|+|||++.+..++.++||||||++++||++|+.||..... ..+..... .+.+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~~~~-~~~~--------- 219 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVYRII-EGKL--------- 219 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHH-hcCC---------
Confidence 1223345688999999999999999999999999999999999998864321 11111111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+......+.+++.+|++.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 220 PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11233455678999999999999999999999864
No 216
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-35 Score=319.78 Aligned_cols=259 Identities=22% Similarity=0.305 Sum_probs=206.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||+|+||.||++... +|+.+|+|..... .....+++.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45677788999999999999865 6888999976543 234467899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... +.+++..+..++.+++.||.|||+ .++++||||||+||++++++.++|+|||++.....
T Consensus 85 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~---- 156 (284)
T cd06620 85 MDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELIN---- 156 (284)
T ss_pred CCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhh----
Confidence 9999999888543 468999999999999999999996 25799999999999999999999999999865321
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccc-----ccHHHHHHHHhhcCchhhhhc
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQ-----VNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~d 734 (845)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||......+. ..+.++... +..
T Consensus 157 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 227 (284)
T cd06620 157 SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ---------IVQ 227 (284)
T ss_pred hccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH---------Hhh
Confidence 112245689999999999888999999999999999999999999975443211 111122211 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
...........+..+.+++.+|++.+|++||++.|++++...+
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 228 EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1110001122556788999999999999999999999876543
No 217
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=7.1e-36 Score=334.09 Aligned_cols=260 Identities=22% Similarity=0.235 Sum_probs=202.4
Q ss_pred HHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec
Q 003139 494 FQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE 569 (845)
Q Consensus 494 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 569 (845)
..++....++|+..+.||+|+||.||+++.. +++.+|+|.+... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3344455688999999999999999999976 6788999987532 22334567889999999999999999999999
Q ss_pred CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 570 RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 570 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
.+..++||||+++|+|.+++... .++...+..++.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999988543 47888899999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhccC----CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRRQ----QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK 725 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~ 725 (845)
++..... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ..
T Consensus 189 a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~----- 256 (371)
T cd05622 189 CMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TY----- 256 (371)
T ss_pred eeEcCcC-CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH------HH-----
Confidence 9764321 11122356799999999998754 37899999999999999999999997533211 11
Q ss_pred cCchhhhhccc--cCCCCCHHHHHHHHHHHHHhhhhCCCC--CCCHHHHHHHHH
Q 003139 726 KGMLDQIMDSN--LVGKVNPASLKKFGETAEKCLAEHGVD--RPSMGDVLWNLE 775 (845)
Q Consensus 726 ~~~~~~~~d~~--l~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~~vl~~L~ 775 (845)
..++... +...........+.+++.+|+...+.+ ||++.+++++..
T Consensus 257 ----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 257 ----SKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ----HHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 1111110 100111234567888999999844433 788988887653
No 218
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=298.93 Aligned_cols=256 Identities=25% Similarity=0.333 Sum_probs=206.4
Q ss_pred HHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--------hHhHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 003139 498 LDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--------EQGIAEFRTEIEMLSKL-RHRHLVSLIGYC 567 (845)
Q Consensus 498 ~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~H~niv~l~g~~ 567 (845)
....++|...++||.|..+.|-+..++ +|...|+|++.... ..-.+.-++|+.+|+++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 345567888889999999999888765 67889998764321 12234557899999998 699999999999
Q ss_pred ecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 568 DERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 568 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
+....+++|+|.|+.|.|.++|.+ .-.+++++..+|++|+..|++|||. .+||||||||+|||+|++.++||+||
T Consensus 93 es~sF~FlVFdl~prGELFDyLts--~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS--KVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh--heeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEecc
Confidence 999999999999999999999954 4579999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhcc------CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR------QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~ 721 (845)
|++.... ........+||++|+|||.++- ..|+..+|+|++|||||.|+.|.+||... .+..
T Consensus 168 GFa~~l~---~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---kQml------ 235 (411)
T KOG0599|consen 168 GFACQLE---PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---KQML------ 235 (411)
T ss_pred ceeeccC---CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---HHHH------
Confidence 9998743 3344567899999999998852 35788999999999999999999999531 1111
Q ss_pred HHhhcCchhhhhccccC--CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLV--GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~--~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
++.-++..... .....+......+++.+||+.||.+|.|.+|++++-..
T Consensus 236 ------MLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 236 ------MLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred ------HHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 12222222221 11223556778899999999999999999999977543
No 219
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=310.98 Aligned_cols=253 Identities=26% Similarity=0.300 Sum_probs=212.2
Q ss_pred CCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.|+..+.||.|.-|+||++.+++ +..+|+|.+.+.. .+...+...|-+||+.+.||.+..|++.++..+..|+|||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 45667789999999999999874 5789999987653 4455677889999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC---
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA--- 655 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~--- 655 (845)
||+||+|..+++.+....+++..+.-++.+|+.||+|||- .|||.|||||+||||-++|++.|+||.|+.....
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt 234 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT 234 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence 9999999999988878889999999999999999999998 9999999999999999999999999999743110
Q ss_pred ------------------------------CCC---------------------cccccccccCCCcCChhhhccCCCCc
Q 003139 656 ------------------------------LDQ---------------------THVSTAVKGSFGYLDPEYFRRQQLTE 684 (845)
Q Consensus 656 ------------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~s~ 684 (845)
... ...+...+||-.|+|||++++...+.
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs 314 (459)
T KOG0610|consen 235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS 314 (459)
T ss_pred eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence 000 01123467999999999999999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCC
Q 003139 685 KSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDR 764 (845)
Q Consensus 685 ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R 764 (845)
++|+|+|||+|||||.|+.||-+....+ .+..++-..+.-...+.....+.+||++.|.+||.+|
T Consensus 315 AVDWWtfGIflYEmLyG~TPFKG~~~~~---------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 315 AVDWWTFGIFLYEMLYGTTPFKGSNNKE---------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred hhhHHHHHHHHHHHHhCCCCcCCCCchh---------------hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence 9999999999999999999997765443 3445555444433344667889999999999999999
Q ss_pred CC----HHHHHHH
Q 003139 765 PS----MGDVLWN 773 (845)
Q Consensus 765 Ps----~~~vl~~ 773 (845)
.. +.||-++
T Consensus 380 lg~~rGA~eIK~H 392 (459)
T KOG0610|consen 380 LGSKRGAAEIKRH 392 (459)
T ss_pred hccccchHHhhcC
Confidence 88 6666443
No 220
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.7e-35 Score=313.22 Aligned_cols=247 Identities=30% Similarity=0.439 Sum_probs=200.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
++|.+.+.||+|+||.||++.. .++.+|+|...... ..+.+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 3577888999999999999975 47889999876433 346789999999999999999999998664 4799999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.......+++..+++++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 9999999976555578999999999999999999998 99999999999999999999999999998753221
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......+..|+|||.+.+..++.++||||||+++|||++ |+.||......+ +... ...+ ....
T Consensus 154 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~------~~~~-~~~~---------~~~~ 217 (254)
T cd05083 154 VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE------VKEC-VEKG---------YRME 217 (254)
T ss_pred CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH------HHHH-HhCC---------CCCC
Confidence 112234567999999998999999999999999999997 898886443211 1111 1111 1111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 223455778899999999999999999999998763
No 221
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.2e-35 Score=316.13 Aligned_cols=247 Identities=27% Similarity=0.375 Sum_probs=203.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..+.||.|++|.||+|+.. +++.+++|...... ......+.+|++++++++|+|++++++++.+....++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5777789999999999999976 68899999876543 445577899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++... ++++..+..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+++...... .
T Consensus 82 ~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--~ 153 (274)
T cd06609 82 GGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--S 153 (274)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc--c
Confidence 999999998643 78999999999999999999998 899999999999999999999999999997644321 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....+.+ .... .... ..+.
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~------~~~~-~~~~-----~~~~---- 217 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR------VLFL-IPKN-----NPPS---- 217 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH------HHHH-hhhc-----CCCC----
Confidence 2234567889999999999899999999999999999999999986543211 1100 1111 0111
Q ss_pred CCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.... .+..+.+++.+||..+|++||++++++++
T Consensus 218 ~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 45678899999999999999999999875
No 222
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-35 Score=332.65 Aligned_cols=264 Identities=25% Similarity=0.236 Sum_probs=200.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc---CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD---DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
..+|.+.+.||+|+||.||++... .+..|++|.+... +.+.+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 357999999999999999999754 3567999987643 23467999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
|++. ++|.+++. ....+++.+++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 67888873 33579999999999999999999999 899999999999999999999999999997644322
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh-------
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD------- 730 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~------- 730 (845)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.............-+....+.....
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 2222335679999999999999999999999999999999999999997644322111000011111000000
Q ss_pred ---h-h--hccccCCC--CC-----HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 731 ---Q-I--MDSNLVGK--VN-----PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 731 ---~-~--~d~~l~~~--~~-----~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+ + ........ .+ ......+.+++.+||+.+|++||++.|++.+-.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 0 0 00000000 00 112356788999999999999999999987743
No 223
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-35 Score=320.01 Aligned_cols=251 Identities=22% Similarity=0.329 Sum_probs=204.9
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
.++|...+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 367888999999999999999864 7899999988765555567788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.. ..+++.+++.++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++.......
T Consensus 98 ~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-- 169 (297)
T cd06656 98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (297)
T ss_pred cCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCc--
Confidence 999999998853 358899999999999999999998 899999999999999999999999999987533211
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||....+...... .... .....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~------~~~~--------~~~~~ 235 (297)
T cd06656 170 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATN--------GTPEL 235 (297)
T ss_pred cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee------eccC--------CCCCC
Confidence 112345688899999999999999999999999999999999999965433221100 0000 00000
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+......+.+++.+||+.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1123345667899999999999999999999875
No 224
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-35 Score=320.43 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=205.2
Q ss_pred cCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.+|+..+.||.|++|.||+|.. .+++.+++|.+........+.+.+|+++++.++|||++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688888999999999999986 468999999887655555678899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|..++.. ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++....... .
T Consensus 99 ~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--~ 170 (296)
T cd06655 99 AGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--S 170 (296)
T ss_pred CCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccccc--c
Confidence 99999998853 358999999999999999999999 899999999999999999999999999987543211 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||.+.+..++.++|||||||++|||++|+.||......... ....... . +.+ .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~------~~~~~~~-~-----~~~--~ 236 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL------YLIATNG-T-----PEL--Q 236 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH------HHHHhcC-C-----ccc--C
Confidence 123456888999999999999999999999999999999999998654332211 0000000 0 000 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+......+.+++.+||..+|.+||++.+++++=.
T Consensus 237 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~ 271 (296)
T cd06655 237 NPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (296)
T ss_pred CcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 12334557889999999999999999999986633
No 225
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.8e-35 Score=312.98 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=196.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-----ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-----SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~ 573 (845)
.+|+..+.||+|+||.||+|... ++..+++|++... ..+..+.+.+|++++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888899999999999999875 5889999986532 23345678899999999999999999998865 3567
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++++||+++++|.+++... ..+++..++.++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 8999999999999998543 358999999999999999999998 89999999999999999999999999998754
Q ss_pred CCCCC-cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQ-THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
..... ........++..|+|||.+.+..++.++|||||||++|||++|+.||......+ .... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~------~~~~---------~ 221 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA------AIFK---------I 221 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH------HHHH---------H
Confidence 32111 111223457889999999999999999999999999999999999986432211 0111 1
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
........++......+.+++ +||..+|++||+++||+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 222 ATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred hcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 100111122333445566666 7888999999999999753
No 226
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.9e-35 Score=317.27 Aligned_cols=248 Identities=26% Similarity=0.377 Sum_probs=201.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
|+..+.||+|+||.||+|.+. +++.||+|..... .....+.+.+|++++++++||||+++++++......++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 445567999999999999865 5788999987643 34456788999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++.. ..+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.+||+|||+++..... ...
T Consensus 86 ~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~--~~~ 157 (277)
T cd06642 86 GGSALDLLKP---GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT--QIK 157 (277)
T ss_pred CCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCc--chh
Confidence 9999998853 368999999999999999999998 89999999999999999999999999999764321 112
Q ss_pred ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
.....++..|+|||++.+..++.++|||||||++|||++|+.|+....+... ... ... ......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~------~~~-~~~---------~~~~~~ 221 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV------LFL-IPK---------NSPPTL 221 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH------Hhh-hhc---------CCCCCC
Confidence 2234678899999999999999999999999999999999999864332211 000 011 111112
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
....+..+.+++.+||+.+|++||++.+++++-.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 2344567889999999999999999999998643
No 227
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.8e-35 Score=318.51 Aligned_cols=252 Identities=27% Similarity=0.390 Sum_probs=203.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+.|++.+.||+|+||.||+|... +++.+++|.....+....+++.+|++++++++|+|++++++.+...+..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 45777889999999999999976 58899999988777777888999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|..++.+.. ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..... ...
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~--~~~ 165 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVK--TLQ 165 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccc--ccc
Confidence 9999988775433 468999999999999999999998 8999999999999999999999999999865322 111
Q ss_pred cccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 661 VSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
......++..|+|||++. ...++.++|||||||++|||++|++|+......+ ....... .. .+
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------~~~~~~~-~~-----~~ 233 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAK-SE-----PP 233 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH------HHHHHhc-CC-----Cc
Confidence 223456788999999884 3457889999999999999999999986433211 1111110 00 01
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+ ..+......+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 TL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11 1123345578899999999999999999999764
No 228
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.6e-35 Score=324.83 Aligned_cols=255 Identities=20% Similarity=0.220 Sum_probs=196.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+++.. +++.+|+|.+... .....+.+.+|..++..++|+||+++.+++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999976 5788999987542 2233456888999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD- 155 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeeccCC-
Confidence 9999999999996532 468999999999999999999998 99999999999999999999999999999764321
Q ss_pred CcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
.........||+.|+|||++.+ +.++.++|||||||+||||++|+.||......+ ........... .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~~--~ 227 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHEER--F 227 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHH------HHHHHHcCCCc--c
Confidence 1112234569999999999875 568899999999999999999999996533211 11111110000 0
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCC--CCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVD--RPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~--RPs~~~vl~~ 773 (845)
.+ ..........+.+++.+|+...+++ |+++++++++
T Consensus 228 ---~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 ---QF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ---cC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 0011223567888899988865543 4688888765
No 229
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.3e-35 Score=313.26 Aligned_cols=249 Identities=26% Similarity=0.409 Sum_probs=200.1
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh---------HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE---------QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
|.....||+|++|.||+|... +++.+++|.+..... +..+.+.+|++++++++||||+++++++.+.+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566779999999999999865 578899997654321 2235788999999999999999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++|+||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 82 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred EEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 9999999999999998543 468999999999999999999998 89999999999999999999999999999764
Q ss_pred CCCCC----cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 654 PALDQ----THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 654 ~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
..... ........|+..|+|||.+.+..++.++||||||+++|||++|+.||........ +
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---------------~ 221 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA---------------I 221 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH---------------H
Confidence 32111 1111234578899999999999999999999999999999999999964321110 0
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 DQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+.. ......+...+..+.+++.+||+.+|.+||++.++++.
T Consensus 222 ~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 222 FKIGE-NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred HHHhc-cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 01111 11112334456778899999999999999999998763
No 230
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.3e-35 Score=313.80 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=201.5
Q ss_pred CCCcceeeeeeceEEEEEEEEcC--CcEEEEEEcCCC----------ChHhHHHHHHHHHHHHh-CCCCCcceEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD--GTKVAVKRGNPR----------SEQGIAEFRTEIEMLSK-LRHRHLVSLIGYCDE 569 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~--g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~niv~l~g~~~~ 569 (845)
.|+..+.||+|+||.||+|.... ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36777889999999999999764 678999976432 23445678889998875 799999999999999
Q ss_pred CCcEEEEEEeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 570 RSEMILVYEYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 570 ~~~~~lV~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
.+..++||||+++++|.+++.. .....+++..+++++.|++.||.|||+ ..+++|+||||+|||+++++.+||+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999988743 233568999999999999999999995 267999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
|++....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... ......
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~------~~~~~~---- 225 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML------SLATKI---- 225 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH------HHHHHH----
Confidence 9997643211 234556889999999999989999999999999999999999998543211 111111
Q ss_pred chhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 MLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.+..............+.+++.+||+.+|++||++.|+..+++
T Consensus 226 -----~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 226 -----VEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----hhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111110011134467889999999999999999999998875
No 231
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8.5e-36 Score=316.53 Aligned_cols=239 Identities=25% Similarity=0.369 Sum_probs=190.7
Q ss_pred eeeeeceEEEEEEEEcC--------CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 509 LLGVGGFGRVYKGTLDD--------GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.||+|+||.||+|.... ...+++|..........+++.+|+.++++++|||++++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 68999999999998642 2348888876655556678999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc--------eEEEeccccCC
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV--------AKVADFGLSKT 652 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~--------~kl~DFGla~~ 652 (845)
++|+|..++.... ..+++..+++++.|++.||+|||+ .+|+||||||+|||++.++. ++++|||++..
T Consensus 82 ~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 82 KFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 9999999986543 368999999999999999999998 99999999999999987765 69999998865
Q ss_pred CCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCC-CCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 653 GPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTR-PALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
... .....++..|+|||++.+ +.++.++||||||+++|||++|. .|+....... ...
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~------~~~--------- 216 (258)
T cd05078 158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK------KLQ--------- 216 (258)
T ss_pred cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH------HHH---------
Confidence 321 123457889999999986 45899999999999999999995 4443222111 000
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+... ....+......+.+++.+||+.+|++||+++++++.|+
T Consensus 217 -~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 217 -FYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -HHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 01122333467889999999999999999999998863
No 232
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-35 Score=315.64 Aligned_cols=253 Identities=25% Similarity=0.367 Sum_probs=200.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|...+.||+|+||.||+|+.. +++.+|+|.+..........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 45667778999999999999865 68899999877665555667889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++... ..+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++..... ...
T Consensus 89 ~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~--~~~ 161 (267)
T cd06645 89 GGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITA--TIA 161 (267)
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccC--ccc
Confidence 999999988543 468999999999999999999999 8999999999999999999999999999865322 111
Q ss_pred cccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 661 VSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......|+..|+|||++. .+.++.++|||||||++|||++|+.|+....+.... ...... . ...+..
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~------~~~~~~-~---~~~~~~ 231 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------FLMTKS-N---FQPPKL 231 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH------Hhhhcc-C---CCCCcc
Confidence 223456899999999974 456889999999999999999999998644322211 000000 0 000111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.. .......+.+++.+|++.+|++||++++++++
T Consensus 232 ~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 232 KD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 00 11234568899999999999999999998753
No 233
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4e-35 Score=327.07 Aligned_cols=264 Identities=21% Similarity=0.278 Sum_probs=197.6
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC------
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS------ 571 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 571 (845)
.++|...+.||+|+||.||++... +|+.+|+|++... .....+++.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 468999999999999999999865 6889999987643 3344567889999999999999999999985443
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
..++||||+++ +|...+. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 57999999965 5655553 247889999999999999999999 999999999999999999999999999997
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc---------HHHH---
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN---------IAEW--- 719 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~---------l~~~--- 719 (845)
.... ........||..|+|||.+.+..++.++|||||||++|||++|+.||......+... ..++
T Consensus 172 ~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (359)
T cd07876 172 TACT---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNR 248 (359)
T ss_pred cccc---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 5321 222334578999999999999999999999999999999999999997543221100 0000
Q ss_pred ----HHHHhhcC------chhhhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 720 ----AMTWQKKG------MLDQIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 720 ----~~~~~~~~------~~~~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
........ ...+....... ..........+.+++.+||+.||++|||+.|++++-.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 249 LQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000 00000000000 0011112456889999999999999999999987643
No 234
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-35 Score=318.51 Aligned_cols=264 Identities=25% Similarity=0.358 Sum_probs=205.3
Q ss_pred cccHHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEe
Q 003139 491 LFMFQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCD 568 (845)
Q Consensus 491 ~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~ 568 (845)
.+.+..+..+.++|+..+.||+|+||.||+++.. +++.+++|....... ..+++.+|+.+++++ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 3555667778899999999999999999999875 578899998764322 235678899999999 6999999999884
Q ss_pred -----cCCcEEEEEEeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc
Q 003139 569 -----ERSEMILVYEYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV 641 (845)
Q Consensus 569 -----~~~~~~lV~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~ 641 (845)
.++..++||||+++++|.+++.. .....+++..+..++.|+++||.|||+ .+|+||||||+||++++++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCC
Confidence 34568999999999999988753 233568999999999999999999998 89999999999999999999
Q ss_pred eEEEeccccCCCCCCCCcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccH
Q 003139 642 AKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNI 716 (845)
Q Consensus 642 ~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l 716 (845)
+||+|||+++..... ........|+..|+|||++.. ..++.++|||||||++|||++|+.|+.........
T Consensus 163 ~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~-- 238 (286)
T cd06638 163 VKLVDFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL-- 238 (286)
T ss_pred EEEccCCceeecccC--CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--
Confidence 999999998764321 112234568999999998853 45789999999999999999999998654322110
Q ss_pred HHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 717 AEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 717 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
. . ..... .+.+ ..+......+.+++.+||+.+|++||++.|+++.+
T Consensus 239 ---~-~-~~~~~-----~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 239 ---F-K-IPRNP-----PPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ---h-h-ccccC-----CCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 0 0 00000 0000 01112345688999999999999999999998764
No 235
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.3e-35 Score=325.17 Aligned_cols=255 Identities=22% Similarity=0.228 Sum_probs=196.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|++.+.||+|+||.||+++.. +++.+|+|.+... .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999976 5889999987532 2234566889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~- 155 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD- 155 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecCCC-
Confidence 999999999998543 3468999999999999999999999 99999999999999999999999999998653321
Q ss_pred CcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
.........||+.|+|||++.. +.++.++|||||||++|||++|+.||......+ .............+
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~~~ 229 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKEHFQF 229 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH------HHHHHHcCCCcccC
Confidence 1112233568999999999863 467889999999999999999999996532211 11111111000000
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhh--CCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAE--HGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~--~p~~RPs~~~vl~~ 773 (845)
..........+.+++.+|+.. ++..||++.+++++
T Consensus 230 ------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 230 ------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 001122455677788887654 33447899998877
No 236
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.4e-35 Score=311.17 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=204.5
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.+|++... +|+.+++|++... .....+++.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4778889999999999999865 6889999987542 344557889999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++.......+++.++++++.|++.||.|||+ .+++|+||+|+|||+++++.++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~--~ 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST--V 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc--h
Confidence 999999998865544568999999999999999999998 89999999999999999999999999999764321 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......|+..|+|||++.++.++.++|+|||||+++||++|+.|+...... +........ . ..
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~~---------~-~~ 219 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK------NLVLKIIRG---------S-YP 219 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH------HHHHHHhcC---------C-CC
Confidence 1122345788999999999999999999999999999999999998643211 111111111 0 01
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+......+.+++.+||+.+|.+||++.+|+++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 220 PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1223445678999999999999999999999864
No 237
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.5e-35 Score=317.12 Aligned_cols=260 Identities=27% Similarity=0.383 Sum_probs=205.6
Q ss_pred ccHHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEec
Q 003139 492 FMFQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDE 569 (845)
Q Consensus 492 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 569 (845)
.++.++....+.|+..+.||+|+||.||+|... +++.+|+|...... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355666677789999999999999999999975 67889999875443 3446788999999998 69999999999843
Q ss_pred ------CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceE
Q 003139 570 ------RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAK 643 (845)
Q Consensus 570 ------~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~k 643 (845)
....+++|||+++|+|.+++.......+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEE
Confidence 4578999999999999999876555568899999999999999999998 8999999999999999999999
Q ss_pred EEeccccCCCCCCCCcccccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHH
Q 003139 644 VADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAE 718 (845)
Q Consensus 644 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~ 718 (845)
|+|||+++..... ........|+..|+|||.+. ...++.++|||||||++|||++|+.||....+.+...
T Consensus 162 l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~--- 236 (282)
T cd06636 162 LVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF--- 236 (282)
T ss_pred EeeCcchhhhhcc--ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---
Confidence 9999998753211 11123456889999999886 3568889999999999999999999986543221110
Q ss_pred HHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 719 WAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
.+.............+..+.+++.+||+.+|.+||++.|+++
T Consensus 237 ------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 ------------LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------------hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000011111112234567899999999999999999999875
No 238
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.5e-35 Score=310.16 Aligned_cols=248 Identities=27% Similarity=0.405 Sum_probs=202.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-----hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-----EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
+|+..+.||+|++|.||+|... +++.+++|.+.... .+..+.+.+|++++++++|+||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3666788999999999999976 78999999765432 34567899999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
+||+++++|.+++... .++++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 9999999999998543 468999999999999999999998 89999999999999999999999999998764321
Q ss_pred CCcccccccccCCCcCChhhhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQ-LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
. ......++..|++||.+.... ++.++|+||||+++|||++|+.||......+ ..........
T Consensus 156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~------- 219 (258)
T cd06632 156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA------AVFKIGRSKE------- 219 (258)
T ss_pred c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH------HHHHHHhccc-------
Confidence 1 223456888999999988776 8999999999999999999999986543211 1111111000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+......+.+++.+||+.+|.+||++.+++..
T Consensus 220 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 220 --LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred --CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 112233445678899999999999999999998753
No 239
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.1e-35 Score=312.89 Aligned_cols=249 Identities=24% Similarity=0.381 Sum_probs=205.3
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.|+..+.||+|+||.||+|... +++.+|+|..... .....+.+.+|++++++++|+||+++++++.+....++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4566778999999999999975 5788999987643 3455678999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.. .++++.++..++.|++.||+|||+ .+++|+||+|+||++++++.++|+|||++....... .
T Consensus 85 ~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~ 156 (277)
T cd06640 85 GGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--I 156 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc--c
Confidence 99999998853 368899999999999999999998 899999999999999999999999999997643211 1
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||++.+..++.++|||||||++|||++|+.|+....+.... . .........
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------~----------~~~~~~~~~ 220 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------F----------LIPKNNPPT 220 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------h----------hhhcCCCCC
Confidence 223346788999999999989999999999999999999999998654332111 0 001111122
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.....+..+.+++.+||+.+|++||++.++++.-.
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 34456778999999999999999999999987743
No 240
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-35 Score=326.68 Aligned_cols=193 Identities=27% Similarity=0.342 Sum_probs=165.6
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
...+|.+.+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++|+||+++++++.+....++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3467999999999999999999976 5678999975432 23569999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+. ++|.+++... ...++|.+++.|+.||+.||+|||+ .+|+||||||+|||+++++.+||+|||+++....
T Consensus 138 ~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~--- 209 (357)
T PHA03209 138 HYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV--- 209 (357)
T ss_pred ccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccccc---
Confidence 994 6888887543 3579999999999999999999999 8999999999999999999999999999975221
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALN 706 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~ 706 (845)
........||..|+|||++.+..++.++|||||||++|||+++..++.
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 112234568999999999999999999999999999999998765553
No 241
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.9e-35 Score=313.01 Aligned_cols=255 Identities=29% Similarity=0.406 Sum_probs=199.1
Q ss_pred CCcceeeeeeceEEEEEEEEc----CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC------
Q 003139 504 FDESLLLGVGGFGRVYKGTLD----DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS------ 571 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------ 571 (845)
|.+.+.||+|+||.||+|.+. .++.+|+|.+... .....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456678999999999999864 3678999987653 3455678999999999999999999999885432
Q ss_pred cEEEEEEeccCCCccccccCC----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 572 EMILVYEYMANGPLRSHLYGT----DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
..++++||+++|+|.+++... +...+++..+++++.|++.||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999998876432 22357899999999999999999998 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
|+++...............++..|++||.+....++.++||||||+++|||++ |++||...... .+..+.. ..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~---~~ 231 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLI---KG 231 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHH---cC
Confidence 99986432221112223345678999999999999999999999999999999 88887543221 1111111 11
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.. + ..+......+.+++.+|++.+|++||++.++++.|+.+
T Consensus 232 ~~--------~--~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NR--------L--KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred Cc--------C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0 11233456899999999999999999999999999864
No 242
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.4e-35 Score=320.54 Aligned_cols=264 Identities=22% Similarity=0.310 Sum_probs=199.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|...+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46788889999999999999876 57889999876432 22335677899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ ++|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 86 ~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 97 5888887543 2468899999999999999999998 999999999999999999999999999997532211
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh---cCchhhhhc-
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK---KGMLDQIMD- 734 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~d- 734 (845)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|++||......+.. ........ ......+++
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 159 KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQL---HFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCChhhchhhhcc
Confidence 11223456889999998865 45789999999999999999999999754332211 11111000 000011110
Q ss_pred --------cccCC----CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 --------SNLVG----KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 --------~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+.... ...+.....+.+++.+||+.||.+|||+.|++++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 00000 011233456789999999999999999999987533
No 243
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.7e-35 Score=310.35 Aligned_cols=237 Identities=28% Similarity=0.433 Sum_probs=189.0
Q ss_pred eeeeeceEEEEEEEEcCCc-----------EEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 509 LLGVGGFGRVYKGTLDDGT-----------KVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~-----------~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
.||+|+||.||+|.+.+.. .+++|........ ...|.+|+.++++++||||+++++++.. ...++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 6899999999999986432 4777876544333 6788999999999999999999999988 7889999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-------ceEEEecccc
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-------VAKVADFGLS 650 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-------~~kl~DFGla 650 (845)
||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++ .+||+|||++
T Consensus 80 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 80 EYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 9999999999986543 268999999999999999999998 9999999999999999887 7999999998
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccC--CCCchhHHHHHHHHHHHHHcC-CCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLMEVLCT-RPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~S~Gvvl~Elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
+.... .....++..|+|||++.+. .++.++||||||+++|||++| ..|+......+ +.....
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~------~~~~~~--- 220 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE------KERFYQ--- 220 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh------HHHHHh---
Confidence 76332 1233466789999999876 789999999999999999995 66665432211 111110
Q ss_pred chhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 MLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 ~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+... .+......+.+++.+||..+|.+||++.++++.|+
T Consensus 221 ------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 ------DQHR---LPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ------cCCC---CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 11111267889999999999999999999998763
No 244
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-36 Score=325.31 Aligned_cols=245 Identities=27% Similarity=0.442 Sum_probs=204.9
Q ss_pred eeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 509 LLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
+||+|.||+||.|+..+ ...+|||.+........+-+..|+.+-++++|+|||+.+|.|.+++.+-|.||-+|||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 69999999999999764 45689999888777777888999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCC--CHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC-CCCceEEEeccccCCCCCCCCcccccc
Q 003139 588 HLYGTDLPPL--SWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD-DNFVAKVADFGLSKTGPALDQTHVSTA 664 (845)
Q Consensus 588 ~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~ 664 (845)
+|+.+ -+++ ++.+.-.+.+||++||.|||+ +.|||||||-+||||+ -.|.+||+|||.++.....+. ....
T Consensus 662 LLrsk-WGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~TET 735 (1226)
T KOG4279|consen 662 LLRSK-WGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--CTET 735 (1226)
T ss_pred HHHhc-cCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhccCCc--cccc
Confidence 99754 3566 777888899999999999999 9999999999999997 678999999999987554332 2346
Q ss_pred cccCCCcCChhhhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 665 VKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 665 ~~gt~~y~aPE~~~~~--~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
+.||.-|||||++..+ .|..++|||||||.+.||.|||+||........ .+.+-|... ....++
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVGmyK------vHP~iP 801 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVGMYK------VHPPIP 801 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhccee------cCCCCc
Confidence 7899999999999765 588999999999999999999999964432221 112222211 123466
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+...+...++++|+.++|.+||++.++++.
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 7788889999999999999999999998764
No 245
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.1e-35 Score=321.93 Aligned_cols=259 Identities=21% Similarity=0.274 Sum_probs=196.1
Q ss_pred ceeeeee--ceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 507 SLLLGVG--GFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 507 ~~~LG~G--~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
..+||+| +|++||++..+ +|+.||+|++... .....+.+.+|+++++.++||||+++++++..++..++||||++
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 82 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 82 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence 4579999 78999999875 7899999988654 23344567789999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc--
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT-- 659 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~-- 659 (845)
+|+|.+++.......+++..+++++.|++.||+|||+ .+|+||||||+|||++.++.++++||+...........
T Consensus 83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 9999999865544568999999999999999999998 89999999999999999999999999875432111110
Q ss_pred ---ccccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 660 ---HVSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 660 ---~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .... . .+......+
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~----~-~~~~~~~~~ 232 (327)
T cd08227 160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEK----L-NGTVPCLLD 232 (327)
T ss_pred ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH--HHHH----h-cCCcccccc
Confidence 01122346778999999976 4689999999999999999999999965332110 0000 0 000000000
Q ss_pred -------------------ccc-----------------CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 -------------------SNL-----------------VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 -------------------~~l-----------------~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
... ...........+.+++.+||+.||++|||+.+++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 000 00111233467889999999999999999999987543
No 246
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.1e-35 Score=308.96 Aligned_cols=250 Identities=33% Similarity=0.495 Sum_probs=201.2
Q ss_pred CcceeeeeeceEEEEEEEEcC-----CcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTLDD-----GTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.+.+.||.|+||.||++...+ +..+|+|........ ..+.+..|++++.+++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456789999999999999763 378999998765433 56789999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++++|.+++.......+++.++..++.|++.||+|||+ .+++||||||+||++++++.++|+|||+++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999999865543338999999999999999999998 8999999999999999999999999999976443211
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.. .....++..|+|||.+.+..++.++||||+|++++||++ |++|+...... ...... ..+.
T Consensus 159 ~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~------~~~~~~-~~~~--------- 221 (258)
T smart00219 159 YK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE------EVLEYL-KKGY--------- 221 (258)
T ss_pred cc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHH-hcCC---------
Confidence 11 112346789999999988899999999999999999998 77777542211 111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
....+...+..+.+++.+|+..+|++|||+.++++.|
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1112233566789999999999999999999998764
No 247
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.8e-35 Score=327.88 Aligned_cols=264 Identities=20% Similarity=0.274 Sum_probs=198.1
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------ 570 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------ 570 (845)
..++|+..+.||+|+||.||++... .++.+|+|++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999865 5889999987653 334456788999999999999999999988543
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
...++||||+++ +|.+.+. ..+++..+..++.|+++||+|||+ .+|+||||||+||||++++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357999999965 5666553 248899999999999999999998 99999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccH---------HHH--
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNI---------AEW-- 719 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l---------~~~-- 719 (845)
+.... ........||..|+|||++.+..++.++|||||||++|||++|+.||......+.... .++
T Consensus 167 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 167 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 76322 2223345789999999999999999999999999999999999999965432111000 000
Q ss_pred -----HHHHhhcC-chh-----hhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 720 -----AMTWQKKG-MLD-----QIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 720 -----~~~~~~~~-~~~-----~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.....+.. ... ......+. ..........+.+++.+||+.||++|||+.|++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 00000000 000 00000000 001122345688999999999999999999998763
No 248
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.6e-35 Score=310.33 Aligned_cols=253 Identities=28% Similarity=0.396 Sum_probs=205.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|+..+.||+|+||.||+|... +++.+++|..........+.+.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 56888899999999999999875 57889999877665556788999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++... ...+++.++..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||++...... ..
T Consensus 83 ~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~--~~ 156 (262)
T cd06613 83 GGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT--IA 156 (262)
T ss_pred CCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhh--hh
Confidence 999999988543 2468999999999999999999998 89999999999999999999999999998753321 11
Q ss_pred cccccccCCCcCChhhhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 661 VSTAVKGSFGYLDPEYFRRQ---QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......++..|+|||.+... .++.++||||||+++|||++|+.|+......+... . ..... ...+.+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~------~-~~~~~---~~~~~~ 226 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF------L-ISKSN---FPPPKL 226 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH------H-HHhcc---CCCccc
Confidence 22345678899999999776 88999999999999999999999986543222110 0 00000 000111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
......+..+.+++.+||+.+|.+||++.+|+.
T Consensus 227 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 --KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 122345677899999999999999999999875
No 249
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4.9e-35 Score=309.62 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=203.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||++... +++.+++|++... +....+.+.+|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4778889999999999999864 6788999987543 344567899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGla~~~~~~~~ 658 (845)
+++++|.+++.......+++..+.+++.|++.||+|||+ ++++||||||+||+++++ +.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-- 155 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-- 155 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--
Confidence 999999999976555568999999999999999999998 899999999999999854 46899999999764321
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....... .+...... ..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~~~~~----------~~ 218 (256)
T cd08220 156 -SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA------LVLKIMSG----------TF 218 (256)
T ss_pred -ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH------HHHHHHhc----------CC
Confidence 11223567889999999999899999999999999999999999986533211 11111110 01
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+......+.+++.+||+.+|.+|||+.|++++
T Consensus 219 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 219 APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11223345678899999999999999999999864
No 250
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.7e-35 Score=312.49 Aligned_cols=255 Identities=24% Similarity=0.388 Sum_probs=200.3
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC----------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS----------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS 571 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~ 571 (845)
+|...+.||+|+||.||+|... +|+.+|+|.+.... ....+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3566779999999999999865 68899999764321 112356788999999999999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999998654 478999999999999999999998 899999999999999999999999999997
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCC--CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQ--LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
...............++..|+|||.+.... ++.++||||||+++|||++|+.|+......+ ......... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~ 229 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA------AMFKLGNKR-S 229 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH------HHHHhhccc-c
Confidence 643322222233456889999999987654 8999999999999999999999985322111 011111000 0
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 DQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.........+.....+.+++.+||+.+|.+||++.+|+++
T Consensus 230 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 230 ----APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ----CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0111111223446788899999999999999999999864
No 251
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.9e-35 Score=311.97 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=190.5
Q ss_pred eeeeeceEEEEEEEEcCC---cEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCC
Q 003139 509 LLGVGGFGRVYKGTLDDG---TKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+.+++.++||||+++++.|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 346677665433 4456789999999999999999999999999999999999999999
Q ss_pred ccccccCCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 585 LRSHLYGTD--LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 585 L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|.+++.... ...+++..+..++.|+++||+|||+ .+++||||||+|||++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999986542 2356777888999999999999998 89999999999999999999999999998643221111222
Q ss_pred cccccCCCcCChhhhcc-------CCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 663 TAVKGSFGYLDPEYFRR-------QQLTEKSDVYSFGVVLMEVLCT-RPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~-------~~~s~ksDV~S~Gvvl~Elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
....++..|+|||++.. ..++.++|||||||++|||+++ ..|+...... +.......+ ....+.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~~~~~~~~-~~~~~~~ 231 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR------EVLNHVIKD-QQVKLFK 231 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHhh-cccccCC
Confidence 34567889999998753 3457899999999999999974 5666433221 112221111 1122233
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+.+. ......+.+++..|| .+|++||++++|++.|.
T Consensus 232 ~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3322 224456788899999 67999999999998874
No 252
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.1e-35 Score=315.73 Aligned_cols=263 Identities=22% Similarity=0.269 Sum_probs=197.4
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|++|.||+|+.. +++.+|+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999975 68899999875432 22346788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTD-LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
++ ++|.+++.... ...+++.++..++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 154 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP-- 154 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC--
Confidence 97 68888775432 3578999999999999999999998 89999999999999999999999999998753221
Q ss_pred cccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHh-------h-cCch
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQ-------K-KGML 729 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~-------~-~~~~ 729 (845)
........+++.|+|||.+.+. .++.++|||||||+++||++|++||........ +........ . ...+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ--LFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhcchhh
Confidence 1112234568899999988754 578999999999999999999999875432111 000000000 0 0000
Q ss_pred ---hhhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 ---DQIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ---~~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+.... .........++.+++.+||+.||.+|||+.+|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000 00111234567899999999999999999998753
No 253
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.3e-35 Score=325.38 Aligned_cols=255 Identities=21% Similarity=0.244 Sum_probs=196.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||+++.+ +++.+|+|.+... .....+.+.+|+.++..++|+||+++.+++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999976 4678999987532 2233456888999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.... .
T Consensus 81 ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~-~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME-D 155 (332)
T ss_pred eccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheeccc-C
Confidence 999999999999653 2468999999999999999999999 9999999999999999999999999999875322 1
Q ss_pred CcccccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 658 QTHVSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
.........||+.|+|||++. ...++.++|||||||++|||++|+.||......+ .......... ..
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~--~~ 227 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKE--RF 227 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCCc--cc
Confidence 122223457999999999986 3568899999999999999999999996533211 1111111100 00
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhh--CCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAE--HGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~--~p~~RPs~~~vl~~ 773 (845)
.. ..........+.+++.+|+.. ++..|+++.+++++
T Consensus 228 ---~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 ---QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ---cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 011123456677888887754 34447899998877
No 254
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9e-35 Score=309.80 Aligned_cols=251 Identities=24% Similarity=0.365 Sum_probs=198.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-----ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-----SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 573 (845)
.+|+..++||+|+||.||+|... +|..|++|.+... .....+.+.+|++++++++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888899999999999999875 5889999976422 233456888999999999999999999988653 467
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++++|.+++... ..+++...++++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 8999999999999988543 358899999999999999999998 89999999999999999999999999999754
Q ss_pred CCCCCc-ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQT-HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
...... .......++..|+|||.+.+..++.++|||||||++|||++|+.||........ . .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~---------~~~ 221 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA------I---------FKI 221 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH------H---------HHH
Confidence 321111 112234588899999999988999999999999999999999999864321110 0 011
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.........+......+.+++.+|+. +|++||++++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 222 ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 11111122344556678889999985 99999999998754
No 255
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.8e-35 Score=316.40 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=204.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|++.+.||+|+||.||+|... +++.+++|..........+.|..|++++++++||||+++++.+.+....++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 45777888999999999999975 68899999987777777788999999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.... ..+++.++..++.|++.||.|||+ .+|+|+||||+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--~~ 158 (280)
T cd06611 85 DGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--LQ 158 (280)
T ss_pred CCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccc--cc
Confidence 9999999886433 468999999999999999999999 89999999999999999999999999998653321 11
Q ss_pred cccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 661 VSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
......++..|+|||.+. ...++.++||||||+++|||++|+.||......+ ..... ..+.. +
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~------~~~~~-~~~~~-----~ 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR------VLLKI-LKSEP-----P 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH------HHHHH-hcCCC-----C
Confidence 223456889999999875 3457889999999999999999999986543211 11111 11100 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+ ..+......+.+++.+||+.+|.+||++.++++.
T Consensus 227 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 TL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred Cc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11 1123345678899999999999999999999876
No 256
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.7e-35 Score=327.15 Aligned_cols=263 Identities=20% Similarity=0.275 Sum_probs=197.5
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------ 570 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------ 570 (845)
..++|...+.||+|+||.||++... .++.+|||++... .....+++.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3468999999999999999999865 5788999987643 334456788999999999999999999987543
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
...++||||+++ +|.+.+. ..+++.++..++.|+++||+|||+ ++|+||||||+|||+++++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999965 6666653 247899999999999999999998 89999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHH---------HHHH
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIA---------EWAM 721 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~---------~~~~ 721 (845)
+.... ........+|..|+|||++.+..++.++|||||||++|||++|+.||......+..... ++..
T Consensus 174 ~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 174 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred cccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 76322 22233457899999999999999999999999999999999999999654322110000 0000
Q ss_pred -------HHhhcC-c-----hhhhhcccc---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 722 -------TWQKKG-M-----LDQIMDSNL---VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 722 -------~~~~~~-~-----~~~~~d~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...... . ..++....+ ...........+.+++.+|++.||.+|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 0 000000000 000111123567899999999999999999999876
No 257
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.6e-35 Score=338.73 Aligned_cols=268 Identities=21% Similarity=0.250 Sum_probs=196.8
Q ss_pred HHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCC------CCcceEEEEEe
Q 003139 496 EILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH------RHLVSLIGYCD 568 (845)
Q Consensus 496 el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~g~~~ 568 (845)
++...+++|++.++||+|+||.||+|... .++.||||++.... ...+++..|++++.+++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445788999999999999999999875 57889999886432 233456677777777754 45888999886
Q ss_pred cC-CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-------
Q 003139 569 ER-SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF------- 640 (845)
Q Consensus 569 ~~-~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~------- 640 (845)
.. ...++|||++ +++|.+++... ..+++.++..|+.||+.||+|||+ ..+||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCccccccc
Confidence 54 5789999988 77888887543 479999999999999999999996 24899999999999998765
Q ss_pred ---------ceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc
Q 003139 641 ---------VAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR 711 (845)
Q Consensus 641 ---------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~ 711 (845)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred ccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 49999999886421 2234567999999999999999999999999999999999999999765433
Q ss_pred ccccHH---------HHHHHHhhcCchhhhhccc--cCCCC---------------CHHHHHHHHHHHHHhhhhCCCCCC
Q 003139 712 EQVNIA---------EWAMTWQKKGMLDQIMDSN--LVGKV---------------NPASLKKFGETAEKCLAEHGVDRP 765 (845)
Q Consensus 712 ~~~~l~---------~~~~~~~~~~~~~~~~d~~--l~~~~---------------~~~~~~~l~~l~~~cl~~~p~~RP 765 (845)
+...+. .|...+..+ ...++.+.. +.... .......+.+|+.+||+.||++||
T Consensus 352 ~~~~~i~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 EHLHLMEKTLGRLPSEWAGRCGTE-EARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHcCCCCHHHHhhccch-hHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 222111 111110000 000010000 00000 001134678999999999999999
Q ss_pred CHHHHHHHHH
Q 003139 766 SMGDVLWNLE 775 (845)
Q Consensus 766 s~~~vl~~L~ 775 (845)
|++|++++-.
T Consensus 431 ta~e~L~Hp~ 440 (467)
T PTZ00284 431 NARQMTTHPY 440 (467)
T ss_pred CHHHHhcCcc
Confidence 9999997643
No 258
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.6e-35 Score=315.92 Aligned_cols=262 Identities=27% Similarity=0.356 Sum_probs=204.9
Q ss_pred ccHHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEec
Q 003139 492 FMFQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDE 569 (845)
Q Consensus 492 ~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~ 569 (845)
+.+.++..++++|+..+.||+|+||.||++... +++.+|+|....... ..+++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455666777899999999999999999999875 688999998764422 235677899999998 89999999999865
Q ss_pred C-----CcEEEEEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 570 R-----SEMILVYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 570 ~-----~~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
. +..++|+||+++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCE
Confidence 3 3589999999999999987532 33568999999999999999999998 899999999999999999999
Q ss_pred EEEeccccCCCCCCCCcccccccccCCCcCChhhhccC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHH
Q 003139 643 KVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQ-----QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIA 717 (845)
Q Consensus 643 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~ 717 (845)
||+|||+++...... .......|+..|+|||.+... .++.++|||||||++|||++|+.||......+. +.
T Consensus 168 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~ 243 (291)
T cd06639 168 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LF 243 (291)
T ss_pred EEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HH
Confidence 999999987643211 112334678899999998654 368999999999999999999999865432211 11
Q ss_pred HHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 718 EWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.. .++....+. .+......+.+++.+||+.+|++||++.+++++
T Consensus 244 ----~~-~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 ----KI-PRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ----HH-hcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 10 011111110 122344568899999999999999999999864
No 259
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.1e-34 Score=317.64 Aligned_cols=253 Identities=24% Similarity=0.301 Sum_probs=203.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh---HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE---QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|++|.||+|... +++.+|+|.+..... ...+.+..|++++++++|+||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788889999999999999976 489999998765432 35567899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++.......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999999875555679999999999999999999998 899999999999999999999999999986532211
Q ss_pred Cc---------------------------ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Q 003139 658 QT---------------------------HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLP 710 (845)
Q Consensus 658 ~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~ 710 (845)
.. .......|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 00 011134678899999999999999999999999999999999999864432
Q ss_pred cccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC----HHHHHH
Q 003139 711 REQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS----MGDVLW 772 (845)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs----~~~vl~ 772 (845)
... ..++.+..............+.+++.+||+.+|++||+ +.+++.
T Consensus 238 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DET---------------FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHH---------------HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 211 11112211111111225678999999999999999999 555554
No 260
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.9e-35 Score=314.31 Aligned_cols=253 Identities=26% Similarity=0.359 Sum_probs=202.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..+.||+|+||.||++... .++.+|+|.+... .....+++.+|++++++++|+||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5677889999999999999976 6889999987643 4445678999999999999999999999999999999999999
Q ss_pred cCCCccccccCCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 581 ANGPLRSHLYGTD-LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 581 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++++|..++.... ...+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 155 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA---- 155 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC----
Confidence 9999998886431 3478999999999999999999996 25899999999999999999999999999875322
Q ss_pred ccccccccCCCcCChhhhccC------CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQ------QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~------~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||........ .. .+..+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~------~~------~~~~~~ 223 (286)
T cd06622 156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI------FA------QLSAIV 223 (286)
T ss_pred CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH------HH------HHHHHh
Confidence 112234578899999998654 358899999999999999999999864322110 00 011111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
+.. ....+......+.+++.+||+.+|++||++.+++..-
T Consensus 224 ~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~ 263 (286)
T cd06622 224 DGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHP 263 (286)
T ss_pred hcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcCh
Confidence 111 1123344667888999999999999999999998753
No 261
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=305.71 Aligned_cols=248 Identities=25% Similarity=0.382 Sum_probs=209.1
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
|++..+||+|.||.|||+.++ .|+.+|+|++...+ +++++.+|+.+|.+...|++|+++|.+.....+++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 455668999999999999976 69999999976543 568899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|++.+.++.. ..+|++.++..|++..++||+|||. ..-||||||+.||||+-+|.+||+|||.|.... +.....
T Consensus 113 GSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT--DTMAKR 186 (502)
T KOG0574|consen 113 GSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT--DTMAKR 186 (502)
T ss_pred CcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhh--hhHHhh
Confidence 9999998754 4689999999999999999999998 888999999999999999999999999997533 233334
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
..+.||+.|||||++..-.|..++||||+|+...||.-|++|+....+-...-+ +. -.|...-..+
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-------IP-------T~PPPTF~KP 252 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-------IP-------TKPPPTFKKP 252 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-------cc-------CCCCCCCCCh
Confidence 567899999999999999999999999999999999999999977655332110 00 0111112234
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......+.++++.||-++|++|-|+.+++++
T Consensus 253 E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 253 EEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 5667889999999999999999999987764
No 262
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.9e-35 Score=318.09 Aligned_cols=196 Identities=24% Similarity=0.354 Sum_probs=158.7
Q ss_pred ceeeeeeceEEEEEEEEc---CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcEEEEEEecc
Q 003139 507 SLLLGVGGFGRVYKGTLD---DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEMILVYEYMA 581 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~Ey~~ 581 (845)
.++||+|+||.||+|+.. +++.+|+|.+..... ...+.+|++++++++||||+++++++.. ....++||||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 357999999999999865 457899998764422 2456789999999999999999998854 456889999995
Q ss_pred CCCccccccCC-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE----CCCCceEEEecccc
Q 003139 582 NGPLRSHLYGT-------DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL----DDNFVAKVADFGLS 650 (845)
Q Consensus 582 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl----~~~~~~kl~DFGla 650 (845)
++|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4776665321 12358899999999999999999998 899999999999999 46679999999999
Q ss_pred CCCCCCCC-cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 003139 651 KTGPALDQ-THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPV 708 (845)
Q Consensus 651 ~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~ 708 (845)
+....... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 86432111 112234678999999999876 46899999999999999999999999643
No 263
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=9.7e-35 Score=316.46 Aligned_cols=256 Identities=23% Similarity=0.296 Sum_probs=202.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||++... .++.|++|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999976 57889999876543 234567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999998544 468999999999999999999998 899999999999999999999999999987421100
Q ss_pred -------------CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHh
Q 003139 658 -------------QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQ 724 (845)
Q Consensus 658 -------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~ 724 (845)
.........++..|+|||.+.+..++.++|+||||+++|||++|+.||...... ++.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~------~~~~~~~ 229 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE------ELFGQVI 229 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHH
Confidence 001112345788999999999889999999999999999999999998643221 1111111
Q ss_pred hcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 725 KKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.. . ...+. .....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 230 ~~-~---~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 SD-D---IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred hc-c---cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11 0 00011 111345668899999999999999997666666554
No 264
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.2e-34 Score=307.70 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=203.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~lV~ 577 (845)
+|+..+.||+|+||.||++... +++.+++|.+... .....+++.+|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4677889999999999999865 6788999987532 44556788999999999999999999998753 45679999
Q ss_pred EeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 578 EYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGA--AQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
||+++++|.+++... ...++++..++.++.|++.||+|||..+ ..+++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999988542 2457999999999999999999999321 389999999999999999999999999999864
Q ss_pred CCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
.... .......++..|+|||.+.+..++.++||||||++++||++|+.|+...... ..... ...+
T Consensus 161 ~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~------ 225 (265)
T cd08217 161 GHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL------QLASK-IKEG------ 225 (265)
T ss_pred cCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH------HHHHH-HhcC------
Confidence 4321 1123456889999999999999999999999999999999999998754311 11111 1111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....+......+.+++.+|++.+|++||++.+|+++
T Consensus 226 ---~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 ---KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1122344556788999999999999999999999864
No 265
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.6e-34 Score=307.50 Aligned_cols=257 Identities=24% Similarity=0.360 Sum_probs=206.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||.|+||.||+|... ++..+++|++.... ....+.+.+|+++++.++|+|++++++.+...+..++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888899999999999999865 67889999876432 33567899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTDL-PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
+++++|.+++..... ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999865432 568999999999999999999998 9999999999999999999999999999876443222
Q ss_pred c--ccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 659 T--HVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 659 ~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
. .......|+..|+|||++... .++.++|||||||++|||++|+.||......+. ... .... ..+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--~~~----~~~~------~~~ 225 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV--LML----TLQN------DPP 225 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh--HHH----HhcC------CCC
Confidence 2 122345688999999998877 789999999999999999999999965433211 111 0111 011
Q ss_pred ccCCCC-CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKV-NPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~-~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+.... ....+..+.+++.+|++.+|++||++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111111 12455778899999999999999999999864
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-34 Score=311.01 Aligned_cols=262 Identities=23% Similarity=0.262 Sum_probs=200.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..+.||+|+||.||+|+.. +|+.+|+|++.... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36788889999999999999976 58899999865432 2234568899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++++.|..++... ..+++..++.++.|++.||+|||+ ++++||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99999888776433 368999999999999999999999 9999999999999999999999999999976433221
Q ss_pred cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc-----------
Q 003139 659 THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK----------- 726 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~----------- 726 (845)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+... .+ ......
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~ 230 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLY--LI-RKTLGDLIPRHQQIFST 230 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHH--HH-HHHhCCCChHHhhhccc
Confidence 1223457789999999876 568899999999999999999999997544322110 00 000000
Q ss_pred -CchhhhhccccCCCC-----CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 727 -GMLDQIMDSNLVGKV-----NPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 727 -~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
........+...... .+.....+.+++.+||+.+|++||++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000000 01234678899999999999999999998753
No 267
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=9.9e-35 Score=345.42 Aligned_cols=254 Identities=21% Similarity=0.333 Sum_probs=197.9
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec--CCcEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--RSEMIL 575 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--~~~~~l 575 (845)
.++|.+.+.||+|+||.||+++.. .++.+|+|.+... .......|..|+.++++++|||||++++++.+ ...++|
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 467899999999999999999976 5678889976543 34456788999999999999999999998744 456899
Q ss_pred EEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcC----CCceeeccCCCCcEEECC-----------
Q 003139 576 VYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGA----AQSIIHRDVKTTNILLDD----------- 638 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~----~~~ivHrDik~~NILl~~----------- 638 (845)
||||+++|+|.++|... ....+++..++.|+.||+.||+|||+.. ..+||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999988642 2357999999999999999999999732 145999999999999964
Q ss_pred ------CCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Q 003139 639 ------NFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLP 710 (845)
Q Consensus 639 ------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~ 710 (845)
...+||+|||+++.... ........||+.|+|||++.+ ..++.++||||||||||||++|+.||.....
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~---~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGI---ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred ccccCCCCceEEccCCccccccc---cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 33589999999976432 122234578999999999864 4689999999999999999999999964322
Q ss_pred cccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 711 REQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 711 ~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.. ..... ...+ +.+ ........+.+|+..||+.+|.+||++.+++..
T Consensus 249 ~~-----qli~~-lk~~-------p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 249 FS-----QLISE-LKRG-------PDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HH-----HHHHH-HhcC-------CCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 11 11111 1111 001 012234678899999999999999999999854
No 268
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-36 Score=322.65 Aligned_cols=245 Identities=27% Similarity=0.391 Sum_probs=200.8
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.|...+.||+|.||.||.|+.. +.+.||||++.-. +...+.++++|+..|.+++|||++.+-|++......+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3555667999999999999864 6788999998654 34456789999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|| -||-.++|.-.+ .+|-..++.-|+.+.+.||+|||+ ++.||||||+.||||.+.|.+||+|||.|.+...
T Consensus 107 YC-lGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred HH-hccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 99 567777774332 478899999999999999999999 9999999999999999999999999999876432
Q ss_pred cccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 659 THVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
...++|||.|||||++. .++|+-|+||||+|+...||.-.++|......-.. + .....++ .|
T Consensus 179 ---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA--L----YHIAQNe------sP 243 (948)
T KOG0577|consen 179 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--L----YHIAQNE------SP 243 (948)
T ss_pred ---hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH--H----HHHHhcC------CC
Confidence 35689999999999874 57999999999999999999999999865443221 0 0101110 11
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+ ...+....|..++..||++-|.+|||.++++.+
T Consensus 244 tL---qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 244 TL---QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CC---CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 22 135677889999999999999999999886543
No 269
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=8.6e-35 Score=310.87 Aligned_cols=255 Identities=27% Similarity=0.406 Sum_probs=201.2
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC-----
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS----- 571 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~----- 571 (845)
.++++|+..+.||+|++|.||+|... +++.+++|.+..... ..+++.+|+++++++ +|+||+++++++.+..
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35688999999999999999999975 578899998765443 346789999999999 6999999999996644
Q ss_pred -cEEEEEEeccCCCccccccCCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 572 -EMILVYEYMANGPLRSHLYGTD--LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 572 -~~~lV~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCCc
Confidence 4899999999999999886432 4578999999999999999999998 899999999999999999999999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHH
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTW 723 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~ 723 (845)
++...... ........|+..|+|||.+.. ..++.++|||||||+|+||++|+.||........ + ..
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~----~~- 229 (275)
T cd06608 159 VSAQLDST--LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--L----FK- 229 (275)
T ss_pred cceecccc--hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--H----HH-
Confidence 98753321 112234568889999998753 3578899999999999999999999964322110 0 00
Q ss_pred hhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 724 QKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 724 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...... +.+ ..+......+.+++.+||..||++|||+.+++++
T Consensus 230 ~~~~~~-----~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 230 IPRNPP-----PTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhccCC-----CCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 001100 011 1122355678899999999999999999999763
No 270
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-34 Score=307.88 Aligned_cols=254 Identities=26% Similarity=0.430 Sum_probs=202.8
Q ss_pred CCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCC------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRS------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~l 575 (845)
+|+..+.||+|++|.||+|.. .+++.+|+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467778999999999999986 468899999875432 2245788999999999999999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-ceEEEeccccCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-VAKVADFGLSKTGP 654 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DFGla~~~~ 654 (845)
|+||+++++|.+++... .++++..+..++.|++.||+|||+ .+++|+||||+||+++.++ .+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999998543 478999999999999999999999 8999999999999998775 69999999987643
Q ss_pred CCCC--cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 655 ALDQ--THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 655 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
.... ........++..|+|||.+.+..++.++||||+|++++||++|+.||......... .... +.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~---------~~ 223 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIF---------KI 223 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHH---------HH
Confidence 3211 11122346788999999999889999999999999999999999998643322111 1110 11
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.........+......+.+++.+|++.+|.+||++.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 224 ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 11111123444566788999999999999999999998753
No 271
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-34 Score=313.05 Aligned_cols=263 Identities=22% Similarity=0.271 Sum_probs=201.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..+.||+|+||.||+|... +++.|++|++... .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999976 5789999987643 23345778999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++++.|..++.. ...+++.++..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEAS--PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9998777665533 2458999999999999999999998 8999999999999999999999999999986543222
Q ss_pred cccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh------------
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK------------ 725 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~------------ 725 (845)
.......++..|+|||++.+. .++.++||||||+++|||++|++||......+.. ........
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQL---YLIQKCLGPLPPSHQELFSS 231 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCCHHHhhhccc
Confidence 122345678899999999888 8899999999999999999999998654322111 00000000
Q ss_pred cCchh-----hhhcccc-CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 726 KGMLD-----QIMDSNL-VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 726 ~~~~~-----~~~d~~l-~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..... ...++.. ....+...+..+.+++.+||..+|++||++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 232 NPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred CccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 0000000 001122236779999999999999999999998753
No 272
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=4.4e-34 Score=306.73 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=201.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
-|+..+.||+|+||.||+|... +++.+|+|..... .....+.+.+|++++++++||||+++++++.++...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667778999999999999865 6789999986543 2344578899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.. ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++..... ..
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~--~~ 156 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--QI 156 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccc--hh
Confidence 99999998853 368999999999999999999998 99999999999999999999999999998754321 11
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||.+.+..++.++|||||||++|||++|+.|+....... +.... ... ....
T Consensus 157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~-~~~---------~~~~ 220 (277)
T cd06641 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFLI-PKN---------NPPT 220 (277)
T ss_pred hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHHH-hcC---------CCCC
Confidence 1223467889999999998899999999999999999999999986432211 11111 110 0111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.....+..+.+++.+|++.+|.+||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 223445678899999999999999999999986
No 273
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-34 Score=314.69 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=158.3
Q ss_pred eeeeeeceEEEEEEEEc---CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEe--cCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD---DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCD--ERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~--~~~~~~lV~Ey~~~ 582 (845)
..||+|+||.||+|+.. ++..+|+|.+..... ...+.+|++++++++||||+++++++. .....++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999865 346799998765432 246788999999999999999999884 35678999999964
Q ss_pred CCccccccC-------CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE----CCCCceEEEeccccC
Q 003139 583 GPLRSHLYG-------TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL----DDNFVAKVADFGLSK 651 (845)
Q Consensus 583 gsL~~~l~~-------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl----~~~~~~kl~DFGla~ 651 (845)
+|.+++.. .....+++..+..++.|++.||+|||+ .+|+||||||+|||+ ++++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 66665532 122358899999999999999999998 899999999999999 567899999999998
Q ss_pred CCCCCCC-cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 003139 652 TGPALDQ-THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPV 708 (845)
Q Consensus 652 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~ 708 (845)
....... ........||..|+|||.+.+ ..++.++|||||||++|||++|++||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 6432211 112234568999999999876 45899999999999999999999998643
No 274
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-35 Score=317.95 Aligned_cols=252 Identities=23% Similarity=0.339 Sum_probs=207.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcC--CCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGN--PRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E 578 (845)
..|++.++||+||.+.||++...+.+.+|+|++. ..+.+.+.-|.+|++.|.+|+ |.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 4678888999999999999998888889998754 346777889999999999995 9999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|= .-+|..+|.+.......| .+..+..|++.++.++|+ ++|||.||||.|+|+-+ |.+||+|||+|........
T Consensus 441 ~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 76 568999998776555667 778899999999999999 99999999999999986 5999999999987665444
Q ss_pred cccccccccCCCcCChhhhccC-----------CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQ-----------QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~-----------~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
.-.....+||+.||+||.+... +.+.++||||+|||||+|+.|++||.... ..|.
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~a------- 580 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQIA------- 580 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHHH-------
Confidence 4455578999999999998532 25679999999999999999999995321 1122
Q ss_pred chhhhhccccCCCCCH-HHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 MLDQIMDSNLVGKVNP-ASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 ~~~~~~d~~l~~~~~~-~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+..+.|+.-.-+++. ....+++++++.||+.||.+||+..+++++
T Consensus 581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 4566777754333331 112338999999999999999999999865
No 275
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.5e-35 Score=314.85 Aligned_cols=265 Identities=26% Similarity=0.342 Sum_probs=199.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..+.||+|+||.||+|..+ +++.+|+|+..... ....+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36778889999999999999986 58899999865432 2234678899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++++|..+.... ..++|.+++.++.|+++||+|||+ .+++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999988876433 358999999999999999999998 899999999999999999999999999987643211
Q ss_pred cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccc-cHHHHHH-------HHhhcCc-
Q 003139 659 THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQV-NIAEWAM-------TWQKKGM- 728 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~-~l~~~~~-------~~~~~~~- 728 (845)
.......++..|+|||++.+ ..++.++||||||+++|||++|++||......+.. .+..+.. .......
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 22233557889999999875 45788999999999999999999988643321110 0000000 0000000
Q ss_pred hhhhhccccC-----CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 729 LDQIMDSNLV-----GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 729 ~~~~~d~~l~-----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+..+... ....+..+..+.+++.+||+.+|++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0000000000 00112345678999999999999999999998764
No 276
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.2e-34 Score=309.69 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=193.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHH-HHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEM-LSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... .....++..|+.. ++.++||||+++++++...+..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36788889999999999999976 68999999876542 2333456666665 566789999999999999999999999
Q ss_pred eccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-ceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 579 YMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQ-SIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 579 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
|++ |+|.+++... ....+++..++.++.|++.||+|||+ + +++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6787776432 23578999999999999999999998 5 899999999999999999999999999876322
Q ss_pred CCCcccccccccCCCcCChhhhcc----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRR----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
........++..|+|||.+.+ ..++.++|+|||||++|||++|+.||...... ... . ..
T Consensus 157 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~-~---------~~ 219 (283)
T cd06617 157 ---SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP----FQQ-L---------KQ 219 (283)
T ss_pred ---ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC----HHH-H---------HH
Confidence 112233467889999998864 45789999999999999999999998532211 000 0 01
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
..............+..+.+++.+||..+|++||++.++++.-
T Consensus 220 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 220 VVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1111000001123456788999999999999999999998753
No 277
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=9.6e-35 Score=314.47 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=199.1
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
...||+|+||.||++... ++..+|+|++........+.+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 346999999999999875 6889999998766666677899999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.+++.. ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++....... ......
T Consensus 107 ~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~ 178 (292)
T cd06658 107 TDIVTH---TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKSL 178 (292)
T ss_pred HHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccCcee
Confidence 998743 358999999999999999999999 899999999999999999999999999987533211 112335
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.|+..|+|||.+.+..++.++||||||++++||++|+.||......+.. .. +...+.+.+.. ....
T Consensus 179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-------~~-----~~~~~~~~~~~--~~~~ 244 (292)
T cd06658 179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-------RR-----IRDNLPPRVKD--SHKV 244 (292)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HH-----HHhcCCCcccc--cccc
Confidence 6889999999999889999999999999999999999998643321110 00 01111111111 1123
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+.+++.+|+..+|.+|||+.++++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 4568889999999999999999999875
No 278
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.1e-35 Score=324.12 Aligned_cols=240 Identities=23% Similarity=0.281 Sum_probs=187.1
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC---CCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL---RHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
||+|+||.||+|+.. +++.||+|++... .......+..|..++.+. +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999875 6899999987542 122334556677777665 699999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|..++... ..+++..+..++.||++||+|||+ ++|+||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~--~~~~~ 153 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLT--DNKTT 153 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCC--CCCCc
Confidence 9999888543 468999999999999999999999 8999999999999999999999999999875322 11223
Q ss_pred cccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKV 741 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~ 741 (845)
....||..|+|||++.+. .++.++|||||||++|||++|+.||......+ .... ...+. ..+ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~-i~~~~------~~~---~ 217 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRN-IAFGK------VRF---P 217 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHH-HHcCC------CCC---C
Confidence 356799999999998764 48999999999999999999999986532211 1111 11110 011 0
Q ss_pred CHHHHHHHHHHHHHhhhhCCCCCCC----HHHHHH
Q 003139 742 NPASLKKFGETAEKCLAEHGVDRPS----MGDVLW 772 (845)
Q Consensus 742 ~~~~~~~l~~l~~~cl~~~p~~RPs----~~~vl~ 772 (845)
.......+.+++.+||+.+|.+||+ +.++++
T Consensus 218 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1123456789999999999999984 555554
No 279
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.3e-34 Score=311.66 Aligned_cols=251 Identities=23% Similarity=0.340 Sum_probs=204.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++|...+.||+|+||.||++... +++.+++|.+........+.+.+|+.++++++|||++++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888889999999999999864 67889999886555555678899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++... .+++.++..++.|++.||.|||+ .+++||||||+||++++++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-- 170 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence 999999998543 57899999999999999999998 8999999999999999999999999999865432211
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+.... .... ......
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~--------~~~~~~ 236 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATN--------GTPELQ 236 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcC--------CCCCCC
Confidence 12334688899999999988999999999999999999999999965433221100 0000 000011
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.+......+.+++.+||+.+|++||++.+++.+-
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 1223456788999999999999999999998774
No 280
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-34 Score=312.33 Aligned_cols=262 Identities=21% Similarity=0.299 Sum_probs=198.5
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|++|.||+|+.. +|+.+++|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778889999999999999875 68899999876432 22345788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ ++|.+++.......+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 95 688888876555679999999999999999999998 899999999999999999999999999987543211
Q ss_pred ccccccccCCCcCChhhhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc------------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQ-LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK------------ 726 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~-~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------ 726 (845)
.......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+ .+..........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHHHhCCCChhhhhhhhHHH
Confidence 1122345678999999887644 6899999999999999999999986543211 111111000000
Q ss_pred ---CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 727 ---GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 727 ---~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..........+ ....+.....+.+++.+|++.||.+||++++++.+
T Consensus 233 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 233 DYKPSFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHhhcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00000000000 00011234567899999999999999999999753
No 281
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.7e-34 Score=305.74 Aligned_cols=250 Identities=23% Similarity=0.391 Sum_probs=202.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||+|... +|..+|+|.+... .....+.+.+|++++++++|+||+++++.+.+....++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999976 5788999987543 223456788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-ceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-VAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DFGla~~~~~~~~ 658 (845)
+++++|.+++.......+++..++.++.|++.||.|||+ .+++|+||||+||++++++ .+||+|||.+..... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~--~ 155 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND--S 155 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC--C
Confidence 999999999876554568999999999999999999998 8999999999999999875 569999999876432 1
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
........|++.|+|||++.+..++.++||||||++++||++|+.|+..... .++....... ..
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~---------~~- 219 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL------HQLVLKICQG---------YF- 219 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHhcc---------cC-
Confidence 1122234588899999999988999999999999999999999999854321 2222221111 11
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+.....+.+++.+|++.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 220 APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11223345678899999999999999999999764
No 282
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2e-34 Score=310.33 Aligned_cols=262 Identities=23% Similarity=0.277 Sum_probs=202.0
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||+|+.. +|+.+++|++.... ....+.+.+|+.++++++||||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677889999999999999975 68899999876543 33457889999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+ +++|.+++.... ..+++.+++.++.|+++||+|||+ .+++|+||||+||++++++.++|+|||+++.......
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999886443 569999999999999999999998 8999999999999999999999999999986443221
Q ss_pred ccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch---------
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML--------- 729 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~--------- 729 (845)
.......++..|+|||.+.+. .++.++||||+|++++||++|+++|......+ ...+..........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE---QLAIVFRTLGTPNEETWPGLTSL 231 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH---HHHHHHHHcCCCChHHHhhccCc
Confidence 122345688999999988654 46899999999999999999988775433211 11111111110000
Q ss_pred ---hhhhcccc----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 ---DQIMDSNL----VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ---~~~~d~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+..+.. .....++....+.+++.+|++.+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 001112345788999999999999999999999865
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.5e-34 Score=304.56 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=200.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh--HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE--QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||+|... +++.+++|.+..... ...+++.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4677889999999999999865 688999998765433 4678899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+++..+..++.|+++||+|||+ .+++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999998643 358899999999999999999998 89999999999999999999999999999764432221
Q ss_pred cc--ccccccCCCcCChhhhccCC---CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 660 HV--STAVKGSFGYLDPEYFRRQQ---LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 660 ~~--~~~~~gt~~y~aPE~~~~~~---~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.. .....++..|+|||++.+.. ++.++||||||++++||++|+.||....... ........ +. .
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-----~~~~~~~~-~~-----~ 224 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-----QIMFHVGA-GH-----K 224 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-----HHHHHHhc-CC-----C
Confidence 11 12356788999999998766 8999999999999999999999996432111 01110000 00 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+.+ .........+.+++.+||+.+|.+||++.+++.
T Consensus 225 ~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPI--PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCC--CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001 011123567789999999999999999999874
No 284
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-33 Score=305.52 Aligned_cols=260 Identities=25% Similarity=0.307 Sum_probs=202.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 577 (845)
++|+..+.||.|++|.||++... +++.+|+|.+.... ....+++.+|++++++++||||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35778889999999999999975 57889999876442 34557789999999999999999999998543 4689999
Q ss_pred EeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||+++++|.+++.. .....+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999887643 233568999999999999999999998 9999999999999999999999999999875322
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc--ccccHHHHHHHHhhcCchhhhh
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR--EQVNIAEWAMTWQKKGMLDQIM 733 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ 733 (845)
. ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ....+..|... .....+.
T Consensus 158 ~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 229 (287)
T cd06621 158 S----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPELK 229 (287)
T ss_pred c----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhhc
Confidence 1 112345788999999999999999999999999999999999999754321 11112222111 0111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 734 DSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 734 d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+ .. .........+.+++.+||+.+|.+|||+.|+++.-.
T Consensus 230 ~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 230 D-EP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred c-CC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 0 00 011234567899999999999999999999987643
No 285
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2e-34 Score=311.48 Aligned_cols=263 Identities=22% Similarity=0.300 Sum_probs=196.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56888889999999999999976 688999998764322 2234567899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ ++|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+||++++++.+||+|||+++..... .
T Consensus 85 ~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--~ 157 (291)
T cd07844 85 LD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP--S 157 (291)
T ss_pred CC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC--C
Confidence 97 48988876443 368999999999999999999998 89999999999999999999999999998753221 1
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc---Cchhhhh--
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK---GMLDQIM-- 733 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~-- 733 (845)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ........... .....+.
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVED--QLHKIFRVLGTPTEETWPGVSSN 235 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH--HHHHHHHhcCCCChhhhhhhhhc
Confidence 11223346788999999875 5689999999999999999999999865431111 00000000000 0000000
Q ss_pred ------------ccccCCCCC-HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 734 ------------DSNLVGKVN-PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 734 ------------d~~l~~~~~-~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+..... ......+.+++.+||+.+|++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 236 PEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred cccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000000000 0112567899999999999999999998753
No 286
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=296.89 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=200.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|++.+.||+|.|+.||+..+. .|+.+|+|.++.. +..+.+++.+|+++-+.|+||||++|..-..+....+||+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 44566668999999999998754 7899998876543 34467888999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC---CCCceEEEeccccCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD---DNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~---~~~~~kl~DFGla~~~~~ 655 (845)
+|.|++|..-+-.. .-.++...-..+.||+++|.|+|. ++|||||+||+|+||- ..--+||+|||+|....
T Consensus 91 ~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 91 LVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred cccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 99999997665433 346777788899999999999999 9999999999999995 34468999999998743
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.........||++|||||+++..+|+..+|||+.|||||-||.|++||.+... ..+-+ .+..+.. -+++
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye----~I~~g~y--d~~~ 233 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYE----QIKAGAY--DYPS 233 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHH----HHhcccc--CCCC
Confidence 44455678899999999999999999999999999999999999999975321 11111 1111111 0111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..-+...+...+|+++||..||.+|.|+.|.+.+
T Consensus 234 ----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 234 ----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred ----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 1223445667899999999999999999997654
No 287
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.1e-35 Score=323.03 Aligned_cols=262 Identities=20% Similarity=0.263 Sum_probs=197.6
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--- 570 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--- 570 (845)
..+..++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3345678999999999999999999864 67899999876532 23346678999999999999999999887533
Q ss_pred ---CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 571 ---SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 571 ---~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
...++++|++ +++|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||+++++.+||+||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCC
Confidence 4578999988 7888877642 368999999999999999999999 99999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
|+++.... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||......+. +..+. .....
T Consensus 163 g~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~-~~~~~ 234 (343)
T cd07878 163 GLARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ--LKRIM-EVVGT 234 (343)
T ss_pred ccceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHHHH-HHhCC
Confidence 99976332 1234568999999999876 5789999999999999999999999865332111 11110 00000
Q ss_pred -----------CchhhhhccccCCCC-------CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 727 -----------GMLDQIMDSNLVGKV-------NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 727 -----------~~~~~~~d~~l~~~~-------~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
......+. .+.... .......+.+++.+|++.||.+|||+.|++++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQ-SLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred CCHHHHHhcchhhHHHHhh-ccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 00000000 000000 011234577999999999999999999998763
No 288
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.2e-34 Score=314.60 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=198.9
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
...||+|+||.||++... +++.+|+|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 447999999999999865 6889999988655555567788999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
..++.. ..+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||++...... .......
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~--~~~~~~~ 177 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKSL 177 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhcccc--cccccce
Confidence 987743 358999999999999999999998 89999999999999999999999999998753321 1112345
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.|+..|+|||++.+..++.++|||||||+++||++|+.||......+. ... ..... .+.. ......
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~-~~~~~-----~~~~--~~~~~~ 243 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA------MKR-LRDSP-----PPKL--KNAHKI 243 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHH-HhccC-----CCCc--cccCCC
Confidence 688999999999998999999999999999999999999864332211 011 11100 0000 111233
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
...+.+++.+|++.+|.+||++.+++++-
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~ 272 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHP 272 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhCh
Confidence 45688999999999999999999998863
No 289
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.2e-34 Score=301.32 Aligned_cols=252 Identities=27% Similarity=0.409 Sum_probs=207.0
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~ 577 (845)
+|+..+.||+|++|.||+|... +++.+++|...... ....+.+.+|++++++++|+||+++++.+.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3677789999999999999987 68899999876554 35678899999999999999999999999888 8899999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++.... .+++.++..++.|+++||+|||+ .+++|+||+|+||++++++.+||+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999986543 79999999999999999999999 899999999999999999999999999997644322
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.........++..|+|||.+.+...+.++||||||++++||++|+.||....... .-.. .+.....
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~~~~---------~~~~~~~ 221 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPM-----AALY---------KIGSSGE 221 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-----HHHH---------hccccCC
Confidence 2111334568889999999998889999999999999999999999987544111 1011 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+......+.+++.+|++.+|.+||++.+++.+
T Consensus 222 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 222 PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 222344456789999999999999999999999864
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.7e-34 Score=307.02 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=199.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLR---HRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~ 577 (845)
.|+..+.||+|+||.||+|... +++.+++|.+... .....+++.+|++++++++ |||++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4667778999999999999974 6889999987644 3445677889999999997 999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++... .+++..++.++.|++.||.|||+ .+|+||||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999988542 68999999999999999999998 899999999999999999999999999987644322
Q ss_pred CcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ... ... ...+.
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~~-~~~-----~~~~~ 221 (277)
T cd06917 156 --SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MML-IPK-----SKPPR 221 (277)
T ss_pred --cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hhc-ccc-----CCCCC
Confidence 11234468889999998875 4578999999999999999999999965432211 100 000 00111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+.. ...+..+.+++.+||+.+|++||++.+++.+
T Consensus 222 ~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 222 LED---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111 1245678899999999999999999999875
No 291
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.2e-34 Score=310.13 Aligned_cols=261 Identities=23% Similarity=0.305 Sum_probs=198.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-----HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-----QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
+|+..+.||+|+||.||+|... +|+.|++|++..... .....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4677789999999999999975 688999998765432 2345677899999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+ +++|.+++.... ..+++..+++++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 999999986543 479999999999999999999999 89999999999999999999999999999764332
Q ss_pred CCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC--------
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG-------- 727 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~-------- 727 (845)
.. ......++..|+|||.+.+ ..++.++|||||||+++||++|.++|......+. +.... ......
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~ 230 (298)
T cd07841 156 NR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQ--LGKIF-EALGTPTEENWPGV 230 (298)
T ss_pred Cc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHH--HHHHH-HHcCCCchhhhhhc
Confidence 11 1223356788999998865 5679999999999999999999887764332211 10000 000000
Q ss_pred -chhhhhccccCCC-----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 -MLDQIMDSNLVGK-----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 -~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+........... ........+.+++.+||+.+|++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000000 112335678899999999999999999999875
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.7e-34 Score=312.18 Aligned_cols=248 Identities=28% Similarity=0.381 Sum_probs=197.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
+.|+..+.||+|+||.||+|+.. +++.|++|++... .....+++.+|+++++.++||||+++.++|.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45778889999999999999875 6889999987533 2344567899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||+|+||++++++.+||+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-- 167 (307)
T cd06607 95 EYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-- 167 (307)
T ss_pred HhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCC--
Confidence 9996 5776666433 2468999999999999999999998 8999999999999999999999999999876332
Q ss_pred CcccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.....++..|+|||.+. .+.++.++||||||+++|||++|++|+....... ......... .
T Consensus 168 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~------~~~~~~~~~------~ 231 (307)
T cd06607 168 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQND------S 231 (307)
T ss_pred ----CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH------HHHHHhcCC------C
Confidence 12345788999999874 4678999999999999999999999986432211 011100000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+.+ ........+.+++.+||+.+|++||++.+++.+..
T Consensus 232 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 232 PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 011 12235567899999999999999999999987644
No 293
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.4e-34 Score=306.10 Aligned_cols=253 Identities=26% Similarity=0.349 Sum_probs=203.6
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..+.||+|++|.||++... +++.+++|++.... ....+++.+|++++++++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5667778999999999999976 68899999876553 345578899999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++++|.+++.... ..+++..+.+++.|++.||+|||+ ..+++||||||+||++++++.+||+|||++......
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~---- 154 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS---- 154 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH----
Confidence 9999999986543 578999999999999999999996 478999999999999999999999999998653211
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
......++..|+|||.+.+..++.++||||||++++||++|+.|+....... ....+..... ..... ..
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~---------~~~~~-~~ 223 (265)
T cd06605 155 LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP-DGIFELLQYI---------VNEPP-PR 223 (265)
T ss_pred HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHHH---------hcCCC-CC
Confidence 1112668889999999999999999999999999999999999986543211 1111111111 11110 01
Q ss_pred CCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+.. ....+.+++.+||..+|++||++.+++.+
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1122 56678899999999999999999999865
No 294
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=4.2e-34 Score=308.37 Aligned_cols=248 Identities=21% Similarity=0.353 Sum_probs=201.0
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
|...+.||+|++|.||++... +++.+++|+.........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444568999999999999864 6889999987665555567789999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
++|.+++.. .++++.++..++.|++.||+|||+ ++++||||+|+||++++++.++|+|||++...... ....
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~~~ 172 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VPRR 172 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccC--Cccc
Confidence 999998865 468999999999999999999998 89999999999999999999999999988753321 1112
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....|+..|+|||.+.+..++.++|||||||+++||++|+.||....+. ....... .+. .+.+. ..
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~------~~~~~~~-~~~-----~~~~~--~~ 238 (285)
T cd06648 173 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL------QAMKRIR-DNL-----PPKLK--NL 238 (285)
T ss_pred ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHH-hcC-----CCCCc--cc
Confidence 2346889999999999989999999999999999999999998643221 1111111 110 01111 11
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......+.+++.+||+.+|++||++.+++++
T Consensus 239 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 239 HKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred ccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 2245678999999999999999999998854
No 295
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.7e-34 Score=302.26 Aligned_cols=253 Identities=25% Similarity=0.363 Sum_probs=207.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++|+..+.||+|++|.||+|+.. +++.+++|++..... ...+++.+|++.+.+++|+|++++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 35778889999999999999987 589999998776544 4567899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+++..+++++.|+++||+|||+ ..+++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~--~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-- 154 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-- 154 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhc--cCCCccCCCCHHHEEECCCCCEEEccCccceecccCC--
Confidence 9999999998644 578999999999999999999996 2789999999999999999999999999987643211
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......++..|+|||.+.+..++.++||||||+++|||++|+.|+..........+..+ +..... .
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~------------~~~~~~-~ 221 (264)
T cd06623 155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA------------ICDGPP-P 221 (264)
T ss_pred CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH------------HhcCCC-C
Confidence 112245678899999999999999999999999999999999999865442111111111 111111 1
Q ss_pred CCCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 740 KVNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 740 ~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+.. .+..+.+++.+||..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 12233 56789999999999999999999999875
No 296
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=316.38 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=211.0
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh---HhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE---QGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~l 575 (845)
...|+..+.||.|.||.||+++.+ +|+.+|+|.+..... ...+.+.+|+++|+++. |||||.+.+.+++....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456777789999999999999977 499999998765433 34568899999999998 9999999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC----CceEEEeccccC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN----FVAKVADFGLSK 651 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~----~~~kl~DFGla~ 651 (845)
|||++.||.|.+.+... .+++.....++.|++.+++|||+ .+|+||||||+|+|+... +.+|++|||++.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999998655 39999999999999999999999 999999999999999633 579999999998
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
.... .......+||+.|+|||++....|+..+||||.||++|.|++|.+||......+.. ..
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~---------------~~ 249 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF---------------LA 249 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH---------------HH
Confidence 7443 44556789999999999999999999999999999999999999999765433211 12
Q ss_pred hhcc--ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 732 IMDS--NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 732 ~~d~--~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+... .......+.......+++..|+..||.+|+|+.+++++
T Consensus 250 i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 250 ILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 2221 22233445667888999999999999999999999986
No 297
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=8.2e-34 Score=298.55 Aligned_cols=249 Identities=28% Similarity=0.452 Sum_probs=204.5
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
|+..+.||+|++|.||++... +++.+++|+.........+++.+|++++++++|+|++++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 667789999999999999986 6889999998776655678899999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||.+........ .
T Consensus 82 ~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 82 GSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 99999886543 478999999999999999999998 9999999999999999999999999999876443211 2
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....++..|+|||.+.+..++.++||||||++++||++|+.|+......+. ...... ....... ..
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~~~-------~~ 220 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA------LFKIAT-NGPPGLR-------NP 220 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH------HHHHHh-cCCCCcC-------cc
Confidence 345688899999999988899999999999999999999999865322111 100000 0000000 01
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......+.+++.+||+.+|.+|||+.+++++
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 221 EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1125678999999999999999999998753
No 298
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3.5e-34 Score=308.95 Aligned_cols=256 Identities=27% Similarity=0.381 Sum_probs=207.1
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
+.++.|+..+.||+|++|.||+|.++ +++.+++|.+..... ..+.+.+|++++++++|+|++++++.+......++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 34566777889999999999999987 688999998876544 5677899999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+++|+||+|+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 95 EYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred eccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 9999999999997543 479999999999999999999998 999999999999999999999999999986533211
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.......++..|++||.+.+..++.++|||||||++|||++|+.|+....+... ....... ....
T Consensus 171 --~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~------~~~~~~~-~~~~------ 235 (286)
T cd06614 171 --SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA------LFLITTK-GIPP------ 235 (286)
T ss_pred --hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhc-CCCC------
Confidence 112334578899999999988999999999999999999999999864332211 1110010 0000
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.......+..+.+++.+|++.+|.+||++.+++++..
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 236 -LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred -CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 0111224567889999999999999999999987544
No 299
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=6.1e-35 Score=323.49 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=206.7
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-C-----CCcceEEEEEecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-H-----RHLVSLIGYCDERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~g~~~~~~~~~l 575 (845)
+|++.+.||+|.||.|-||... +++.||||+++... ....+-..|+.+|..|+ | -|+|++++++..++++||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7889999999999999999855 68999999987553 34566688999999997 3 489999999999999999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC--CCceEEEeccccCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD--NFVAKVADFGLSKTG 653 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~--~~~~kl~DFGla~~~ 653 (845)
|+|.+ .-+|.++|..++...++...+..|+.||+.||..||+ .+|||+||||+||||.+ ...+||+|||.+...
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 5699999998888889999999999999999999998 99999999999999974 348999999999873
Q ss_pred CCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHH--------HHHH---
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAE--------WAMT--- 722 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~--------~~~~--- 722 (845)
.. ... ....+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+..+.++..... |...
T Consensus 342 ~q----~vy-tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~ 416 (586)
T KOG0667|consen 342 SQ----RVY-TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAK 416 (586)
T ss_pred CC----cce-eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 32 112 4456778999999999999999999999999999999998888766655432211 1100
Q ss_pred ----Hhhc--Cchh-----------------h----hhccc-cC-------CCCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 723 ----WQKK--GMLD-----------------Q----IMDSN-LV-------GKVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 723 ----~~~~--~~~~-----------------~----~~d~~-l~-------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
.... +... . ..+.. .. ..........+++++.+|+..||.+|+|.
T Consensus 417 ~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp 496 (586)
T KOG0667|consen 417 KAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITP 496 (586)
T ss_pred ccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCH
Confidence 0000 0000 0 00000 00 00112345778999999999999999999
Q ss_pred HHHHHHHH
Q 003139 768 GDVLWNLE 775 (845)
Q Consensus 768 ~~vl~~L~ 775 (845)
.+++++-.
T Consensus 497 ~qal~Hpf 504 (586)
T KOG0667|consen 497 AQALNHPF 504 (586)
T ss_pred HHHhcCcc
Confidence 99987643
No 300
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.8e-34 Score=311.12 Aligned_cols=250 Identities=26% Similarity=0.370 Sum_probs=199.0
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
|+..+.||+|+||.||+|+.. +++.+|+|++... .....+++.+|++++++++|||++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667778999999999999965 6889999987533 334456788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ |+|.+.+... ..+++|.++..++.|++.||.|||+ .+|+||||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 96 5777766433 3468999999999999999999998 8999999999999999999999999999865322
Q ss_pred ccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 660 HVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.....++..|+|||++. .+.++.++|||||||++|||++|+.||........ ... +....
T Consensus 178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~------~~~---------~~~~~ 240 (317)
T cd06635 178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA------LYH---------IAQNE 240 (317)
T ss_pred --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH------HHH---------HHhcc
Confidence 12346788999999874 46789999999999999999999999864321110 111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
............+.+++.+||+.+|.+||++.++++.+.....
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 1111122345678899999999999999999999988765443
No 301
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.1e-34 Score=309.18 Aligned_cols=245 Identities=25% Similarity=0.352 Sum_probs=201.1
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..+.||+|+||.||++... +++.+|+|.+... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788889999999999999976 5889999987543 2334567889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||+++++|.+++... ..+++..+..++.|++.||+|||+ .+++||||+|+|||+++++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999998544 478999999999999999999999 99999999999999999999999999999764321
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.....+++.|+|||.+.+...+.++||||||++++||++|+.||......+ .. ..+....
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~--------~~~~~~~- 214 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ-------IY--------EKILEGK- 214 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-------HH--------HHHhcCC-
Confidence 234568899999999998889999999999999999999999986433111 00 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
..++......+.+++.+||..+|.+|| +++|++++
T Consensus 215 -~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 215 -VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred -ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 112333456788999999999999998 66666543
No 302
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=306.61 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=204.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
.+.|..-++||+||||+||-+..+ +|+-+|.|++.+. ..++....++|-.+|.+++.+.||.|-..++..+.+|||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 356888899999999999998865 6888999876544 233445678999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
+..|.||+|.-||.+...+.++++..+-++.+|+.||++||. .+||.|||||+|||||+.|+++|+|+|||...+.
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~- 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE- 339 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecCC-
Confidence 999999999999988877889999999999999999999999 9999999999999999999999999999987443
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.......+||.+|||||++.++.|+...|.||+||+||||+.|+.||........ | +-+|.+
T Consensus 340 --g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk-----~-----------eEvdrr 401 (591)
T KOG0986|consen 340 --GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK-----R-----------EEVDRR 401 (591)
T ss_pred --CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh-----H-----------HHHHHH
Confidence 2334456899999999999999999999999999999999999999954322111 0 011111
Q ss_pred c---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 737 L---VGKVNPASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 737 l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
. ..+++....++...+....|++||++|..-+
T Consensus 402 ~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 402 TLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HhcchhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 1 1234455667778888889999999997654
No 303
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.9e-34 Score=310.45 Aligned_cols=262 Identities=21% Similarity=0.269 Sum_probs=196.2
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||+|+.. +|+.+++|++.... ....+.+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999975 68899999875432 22335678899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ ++|.+++... ...+++..++.++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 97 5777776543 3468999999999999999999998 899999999999999999999999999997533211
Q ss_pred ccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc------hhhh
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM------LDQI 732 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~------~~~~ 732 (845)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.|+......+. ............. +...
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD--QLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH--HHHHHHHHhCCCChHHhHHhhhc
Confidence 112234578899999998765 479999999999999999999988654332111 0000000000000 0000
Q ss_pred hccccC---------CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 MDSNLV---------GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~---------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.+.... .+..+.....+.+++.+||+.+|.+|||+.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 010000 01112345678899999999999999999998764
No 304
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8e-34 Score=306.92 Aligned_cols=266 Identities=24% Similarity=0.288 Sum_probs=196.6
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++++|...+.||+|+||.||+|... +|+.+++|.+..... .....+.+|++++++++|+||+++.+++.++...++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4577889999999999999999865 688999998764432 22346788999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||++ ++|.+++.... ..+.+.++..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9996 67766654332 467889999999999999999998 899999999999999999999999999997633211
Q ss_pred CcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH----------Hhh-
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT----------WQK- 725 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~----------~~~- 725 (845)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||.............|... ...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 158 --QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred --CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 112334578899999998764 578999999999999999999999975433211100001000 000
Q ss_pred cCchhhhhccccCCCC-----CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 726 KGMLDQIMDSNLVGKV-----NPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 726 ~~~~~~~~d~~l~~~~-----~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
................ .......+.+++.+|++.+|.+|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000000000000000 0012456789999999999999999999875
No 305
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-34 Score=294.77 Aligned_cols=265 Identities=23% Similarity=0.297 Sum_probs=216.0
Q ss_pred HHHHHHHhcCCCcceeeeeeceEEEEEEEEcC------CcEEEEEEcCC-CChHhHHHHHHHHHHHHhCCCCCcceEEEE
Q 003139 494 FQEILDATNKFDESLLLGVGGFGRVYKGTLDD------GTKVAVKRGNP-RSEQGIAEFRTEIEMLSKLRHRHLVSLIGY 566 (845)
Q Consensus 494 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~------g~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 566 (845)
.+++.-...+++...++-+|.||.||.|.|++ .+.|.+|.++. .++-+...++.|.-++..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 34555566778888889999999999997653 34567776544 466677889999999999999999999999
Q ss_pred Eec-CCcEEEEEEeccCCCccccccC-----C-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC
Q 003139 567 CDE-RSEMILVYEYMANGPLRSHLYG-----T-DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN 639 (845)
Q Consensus 567 ~~~-~~~~~lV~Ey~~~gsL~~~l~~-----~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~ 639 (845)
+.+ ....+.+|.++.-|+|..+|.. . ..+.++-.+...++.|++.|++|||. +++||.||.++|++||+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence 955 4567889999999999999972 2 23457778889999999999999999 999999999999999999
Q ss_pred CceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHH
Q 003139 640 FVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAE 718 (845)
Q Consensus 640 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~ 718 (845)
.++||+|=.++|..-..+......+......||+||.+.+..|+.++|||||||+||||+| |+.|+....+.|.
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm----- 507 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM----- 507 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH-----
Confidence 9999999999997665555555556667789999999999999999999999999999997 7777765555442
Q ss_pred HHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 719 WAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
..+.++| .+-..+-.++.++..++.-||...|++||++++++.-|.+.
T Consensus 508 --~~ylkdG---------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 508 --EHYLKDG---------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred --HHHHhcc---------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 1222222 11123557888999999999999999999999999988653
No 306
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.2e-34 Score=309.51 Aligned_cols=254 Identities=24% Similarity=0.295 Sum_probs=195.5
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|.....||+|+||.||++... +++.+|+|++.... ......+.+|+.++.++. |+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 445568999999999999875 58899999876542 344567889999999996 999999999999999999999998
Q ss_pred cCCCcccc---ccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 581 ANGPLRSH---LYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 581 ~~gsL~~~---l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
+. +|.++ +.......+++..+.+++.|++.||+|||+ ..+++||||||+||++++++.+||+|||+++....
T Consensus 86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~-- 160 (288)
T cd06616 86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD-- 160 (288)
T ss_pred cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc--
Confidence 64 54443 222334579999999999999999999997 25899999999999999999999999999875322
Q ss_pred CcccccccccCCCcCChhhhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQ---QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
........|+..|+|||.+.+. .++.++|||||||++|||++|+.||.... ...+-....... ..
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~------~~ 228 (288)
T cd06616 161 -SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVKG------DP 228 (288)
T ss_pred -CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcCC------CC
Confidence 1112334678899999999776 68999999999999999999999986432 111111111100 01
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
+.+...........+.+++.+||+.+|++||++.+|+..-
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 1222222234567889999999999999999999998763
No 307
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-33 Score=309.20 Aligned_cols=267 Identities=22% Similarity=0.274 Sum_probs=196.7
Q ss_pred CCCcceeeeeeceEEEEEEEEc---CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD---DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMI 574 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~---~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~ 574 (845)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4777889999999999999975 37899999877632 33346678899999999999999999999888 7899
Q ss_pred EEEEeccCCCccccccCC---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC----CCceEEEec
Q 003139 575 LVYEYMANGPLRSHLYGT---DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD----NFVAKVADF 647 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~----~~~~kl~DF 647 (845)
+||||+++ +|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 566555322 22368999999999999999999998 89999999999999999 999999999
Q ss_pred cccCCCCCCCC-cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccc-------ccHHH
Q 003139 648 GLSKTGPALDQ-THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQ-------VNIAE 718 (845)
Q Consensus 648 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~-------~~l~~ 718 (845)
|+++....... ........++..|+|||.+.+ ..++.++|||||||+++||++|++||........ ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986433222 112234567889999998876 4589999999999999999999999975443220 01111
Q ss_pred HHHHHhh-----------cCchhhhhccccCCCCC---------H--HHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 719 WAMTWQK-----------KGMLDQIMDSNLVGKVN---------P--ASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 719 ~~~~~~~-----------~~~~~~~~d~~l~~~~~---------~--~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+.. ........+.......+ . .....+.+++.+||+.+|++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1110000 00000000000000111 0 233568899999999999999999999753
No 308
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5e-34 Score=307.05 Aligned_cols=262 Identities=24% Similarity=0.301 Sum_probs=197.9
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|+..+.||+|++|.||+|... +|+.+++|++.... ....+.+.+|++++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566778999999999999875 78999999876442 223467889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
+ ++|.+++.......+++..+++++.|+++||+|||+ ++++||||+|+||++++++.++|+|||+++...... .
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--~ 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--R 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--c
Confidence 5 689988865544578999999999999999999998 899999999999999999999999999997533211 1
Q ss_pred cccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC--------chhh
Q 003139 661 VSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG--------MLDQ 731 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~--------~~~~ 731 (845)
......++..|+|||++.+. .++.++||||||+++|||++|++||........ +........... .+.+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhchh
Confidence 12233568899999988664 579999999999999999999999865432111 111110000000 0000
Q ss_pred hhcc------ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 732 IMDS------NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 732 ~~d~------~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.... .......+.....+.+++.+|++.+|.+||+++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 00001112334678899999999999999999999753
No 309
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.8e-33 Score=299.72 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=199.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-----ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-----SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~ 573 (845)
.+|+..+.||+|+||.||+|... +++.+++|..... ..+..+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888899999999999999865 6889999976421 234557889999999999999999999998654 458
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++|+||+++++|.+++... ..+++..+.+++.|++.||.|||+ .+++|+||||+||++++++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 8999999999999988543 358899999999999999999998 89999999999999999999999999999764
Q ss_pred CCCCC-cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQ-THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
..... ........++..|+|||.+.+..++.++|||||||+++||++|+.||......+. +.++
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------------~~~~ 221 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA---------------IFKI 221 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH---------------HHHH
Confidence 32111 1112235688999999999998899999999999999999999999864321110 1111
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
.........+......+.+++.+|++ +|..||+..+++.
T Consensus 222 ~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 222 ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11111223445566789999999999 5799999998765
No 310
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=6.5e-34 Score=307.97 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=198.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV 576 (845)
++|+..+.||+|+||.||+|... +++.+++|.+.... ......+.+|++++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46777889999999999999976 58889999876432 22234677899999999999999999998777 889999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||++ ++|.+++.... ..+++.+++.++.|++.||+|||+ .+++||||||+|||+++++.+||+|||+++.....
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99997 58888875433 368999999999999999999998 89999999999999999999999999999864332
Q ss_pred CCcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccH-H---------HHHHH---
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNI-A---------EWAMT--- 722 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l-~---------~~~~~--- 722 (845)
. .......++..|+|||.+.+. .++.++|+||||+++|||++|++||......+.... . .|...
T Consensus 160 ~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 160 L--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 1 112334578899999998764 468999999999999999999999875432211000 0 01000
Q ss_pred -HhhcCchhhhhccccCCCCCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 723 -WQKKGMLDQIMDSNLVGKVNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 723 -~~~~~~~~~~~d~~l~~~~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..............+...++.. ....+.+++.+||+.+|++||++.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000000001111111112222 35678899999999999999999999753
No 311
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3e-34 Score=304.36 Aligned_cols=247 Identities=25% Similarity=0.296 Sum_probs=203.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
+|+..+.||.|+||.||+|... +++.+++|.+... .....+.+.+|++++++++||||+++++.+.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999976 5889999987643 23456789999999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++++|.+++... .++++.++..++.|+++||.|||+ ++++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999998544 578999999999999999999998 899999999999999999999999999987643211
Q ss_pred cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
......|+..|+|||.+.+..++.++|+||||+++|||++|+.|+....... ..+....... ..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~----------~~ 218 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET----------AD 218 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------cc
Confidence 2234567889999999998889999999999999999999999987544321 1111111110 11
Q ss_pred CCCCHHHHHHHHHHHHHhhhhCCCCCCCH--HHHH
Q 003139 739 GKVNPASLKKFGETAEKCLAEHGVDRPSM--GDVL 771 (845)
Q Consensus 739 ~~~~~~~~~~l~~l~~~cl~~~p~~RPs~--~~vl 771 (845)
...+...+..+.+++.+||+.+|.+||++ +|++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 219 VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 22334456788899999999999999999 5554
No 312
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.1e-33 Score=300.86 Aligned_cols=242 Identities=25% Similarity=0.305 Sum_probs=196.9
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||.|++|.||+++.. +++.+++|.+.... ....+.+.+|++++++++||||+++++.+.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999976 48899999875432 23456789999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.+++... ..+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~ 152 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF 152 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence 9999654 358999999999999999999998 999999999999999999999999999998643321 22334
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.++..|++||.+.+..++.++|+||||+++|||++|+.||....... .+.. ..+.+.......+...
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~---------~~~~~~~~~~~~~~~~ 219 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP----MEIY---------NDILKGNGKLEFPNYI 219 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH----HHHH---------HHHhccCCCCCCCccc
Confidence 67889999999998899999999999999999999999997544211 1111 1122111122233344
Q ss_pred HHHHHHHHHHhhhhCCCCCCC-----HHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPS-----MGDVLW 772 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs-----~~~vl~ 772 (845)
...+.+++.+||+.+|++||+ +.|+++
T Consensus 220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 678899999999999999999 666654
No 313
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=8.8e-34 Score=307.05 Aligned_cols=263 Identities=21% Similarity=0.268 Sum_probs=194.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCc-----
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSE----- 572 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~----- 572 (845)
++|+..+.||+|+||.||+|... +++.||+|+..... ......+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999975 68899999865432 223467888999999995 6999999999876665
Q ss_pred EEEEEEeccCCCccccccCCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEecc
Q 003139 573 MILVYEYMANGPLRSHLYGTD---LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFG 648 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFG 648 (845)
.++||||+++ +|.+++.... ...+++..++.++.||+.||+|||+ .+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999985 7888775432 3468999999999999999999998 89999999999999998 8999999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
+++..... ........+++.|+|||++.+ ..++.++||||||+++|||++|+.||......+. +.... ......
T Consensus 157 ~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~--~~~~~-~~~~~~ 231 (295)
T cd07837 157 LGRAFSIP--VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ--LLHIF-KLLGTP 231 (295)
T ss_pred cceecCCC--ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHH-HHhCCC
Confidence 98753221 111123356788999998865 4679999999999999999999999865332211 00000 000000
Q ss_pred chh---hhhc-------c----ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 MLD---QIMD-------S----NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 ~~~---~~~d-------~----~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
... ...+ + .......+.....+.+++.+||+.+|.+||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 0000 0 00000112345678899999999999999999998754
No 314
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-34 Score=303.29 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=208.9
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
-|+..+.||+|.|..|-+|++- .|+.||||.+.+.. ......+.+|++.|+.++|||||+|+.+......+|||.|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 4566668999999999999854 79999999987654 33456788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE-CCCCceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL-DDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl-~~~~~~kl~DFGla~~~~~~~~ 658 (845)
=.+|+|.+++.+.+ ..+.+....+++.||..|+.|+|+ ..+|||||||+||.+ .+-|-+||.|||++-.. ..
T Consensus 99 GD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf---~P 171 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF---QP 171 (864)
T ss_pred cCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccC---CC
Confidence 99999999997664 358899999999999999999999 999999999999866 57789999999998542 23
Q ss_pred cccccccccCCCcCChhhhccCCCC-chhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQLT-EKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~~s-~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
....+..+|+..|-|||.+.+..|+ +++||||+|||||-|+||++||+.....+ .+..|+|-..
T Consensus 172 G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------------TLTmImDCKY 236 (864)
T KOG4717|consen 172 GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------------TLTMIMDCKY 236 (864)
T ss_pred cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------hhhhhhcccc
Confidence 3344567899999999999998886 68999999999999999999997544433 4555666443
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
..+.-...++.+||..||..||.+|.+.++|+.
T Consensus 237 --tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 --TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 356667888999999999999999999999763
No 315
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.8e-33 Score=302.70 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=198.0
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+|+..+.||.|++|.||+|+.. +|+.+|+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778889999999999999976 688999998765432 23456788999999999999999999999999999999999
Q ss_pred cCCCccccccCCC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 581 ANGPLRSHLYGTD-LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 581 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
++ +|.+++.... ...+++..+.+++.|++.||+|||+ .+++||||||+||++++++.+||+|||+++..... .
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~--~ 154 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIP--V 154 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCC--c
Confidence 85 8888775432 3468999999999999999999998 89999999999999999999999999999753221 1
Q ss_pred ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh---cCchhhhhc-
Q 003139 660 HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK---KGMLDQIMD- 734 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~d- 734 (845)
.......++..|++||.+.+ ..++.++|||||||++|||++|+.||......+... . ...... ......+.+
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL--K-IFRIMGTPTESTWPGISQL 231 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHH--H-HHHHhCCCChhhHHHHhcC
Confidence 11223456889999998866 457899999999999999999999987544322110 0 000000 000000000
Q ss_pred cccC-----------CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 735 SNLV-----------GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 735 ~~l~-----------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+.+. ....+.....+.+++.+|++.+|.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 0111233567889999999999999999999875
No 316
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.2e-34 Score=328.57 Aligned_cols=271 Identities=19% Similarity=0.215 Sum_probs=189.7
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEcC--CcEEEEE------------------EcCCCChHhHHHHHHHHHHHHhCCCCC
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLDD--GTKVAVK------------------RGNPRSEQGIAEFRTEIEMLSKLRHRH 559 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~~--g~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~H~n 559 (845)
..++|++.+.||+|+||.||++.++. +...+.| +.. ........+.+|+++|++++|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 35789999999999999999987542 2222222 111 12233456889999999999999
Q ss_pred cceEEEEEecCCcEEEEEEeccCCCccccccCCC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE
Q 003139 560 LVSLIGYCDERSEMILVYEYMANGPLRSHLYGTD---LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL 636 (845)
Q Consensus 560 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl 636 (845)
|+++++++.+.+..++|+|++. ++|.+++.... .......+...|+.|++.||+|||+ ++|+||||||+||||
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence 9999999999999999999985 56666654321 1233456778899999999999998 899999999999999
Q ss_pred CCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCC-CCCCCccccc
Q 003139 637 DDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPAL-NPVLPREQVN 715 (845)
Q Consensus 637 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~-~~~~~~~~~~ 715 (845)
+.++.+||+|||+++..... .........||..|+|||++.+..++.++|||||||+||||++|+.++ ..........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKE-REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCcc-cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999764321 122233467999999999999999999999999999999999998543 3222111111
Q ss_pred HHHHHHHHh--hcC------chhhhhccccCC----CCC-----HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 716 IAEWAMTWQ--KKG------MLDQIMDSNLVG----KVN-----PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 716 l~~~~~~~~--~~~------~~~~~~d~~l~~----~~~-----~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
+.+...... .++ .+.+.++..... .++ ......+.+++.+||+.||.+|||+.|++.+-..
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f 457 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLF 457 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence 111111000 000 000000000000 000 0123456788999999999999999999876443
No 317
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-33 Score=303.59 Aligned_cols=243 Identities=22% Similarity=0.291 Sum_probs=188.5
Q ss_pred eeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHH---hCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 509 LLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLS---KLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~---~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
+||+|+||.||++... +++.+|+|.+.... ......+.+|..++. ..+|||++.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 58899999765431 122233445544443 3479999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||++...... .
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~----~ 151 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----C
Confidence 99999888543 469999999999999999999998 89999999999999999999999999998653221 1
Q ss_pred ccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....|+..|+|||.+.+ ..++.++|||||||+++||++|+.||.......... ..... ......
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~----------~~~~~~ 217 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE----IDRMT----------LTVNVE 217 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH----HHHHh----------hcCCcC
Confidence 223468999999999864 568999999999999999999999996543222111 11100 011112
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWNL 774 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~L 774 (845)
.+......+.+++.+||+.+|.+|| ++++++++.
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 218 LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 3344567788999999999999999 598887764
No 318
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.5e-34 Score=304.98 Aligned_cols=261 Identities=25% Similarity=0.328 Sum_probs=197.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMILVYE 578 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~lV~E 578 (845)
|+..+.||+|++|.||+|+.. +++.+++|++.... ....+.+.+|++++++++|+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566778999999999999976 57899999887552 33446788999999999999999999999887 89999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++ +|.+++.... ..+++.+++.++.|+++||+|||+ .+++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9974 8888875442 478999999999999999999998 8999999999999999999999999999976443221
Q ss_pred cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc---hhhh--
Q 003139 659 THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM---LDQI-- 732 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~-- 732 (845)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ........... ...+
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL---EKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCchhhcccccc
Confidence 12233456788999998765 46899999999999999999999998654432211 11111000000 0000
Q ss_pred ------------hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 ------------MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ------------~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+...+...+...+.+++.+||+.+|++||++.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00000000111125678899999999999999999998764
No 319
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-33 Score=296.96 Aligned_cols=250 Identities=26% Similarity=0.416 Sum_probs=205.8
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|+||.||++... +++.+++|++.... ....+++.+|++++++++|+|++++++.+......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677889999999999999976 68899999876543 35567889999999999999999999999999999999999
Q ss_pred ccCCCccccccCCC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 580 MANGPLRSHLYGTD--LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 580 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
+++++|.+++.... ...+++.++..++.+++.||.|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999886542 3679999999999999999999999 899999999999999999999999999997643321
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
.......|++.|+|||.+.+..++.++||||+|++++||++|+.|+...... +..... ... .
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~------~~~~~~---------~~~-~ 219 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL------ELALKI---------LKG-Q 219 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH------HHHHHH---------hcC-C
Confidence 1223456788999999999999999999999999999999999998643311 111111 111 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+......+.+++.+||..+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 220 YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 112333456778999999999999999999999764
No 320
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=316.50 Aligned_cols=245 Identities=26% Similarity=0.421 Sum_probs=200.8
Q ss_pred eeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 509 LLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
.||.|+||.||||..++ +-..|.|.+...+...+++|+-|+++|+...||+||+|++.++..+.++|+.|||.||-...
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDa 118 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDA 118 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhH
Confidence 58999999999998774 34457788888899999999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccccc
Q 003139 588 HLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKG 667 (845)
Q Consensus 588 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~g 667 (845)
.+..-. ..|+..++.-+|+|++.||.|||+ ++|||||||+.|||++-+|.++|+|||.+.... ........+.|
T Consensus 119 imlEL~-r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRDsFIG 192 (1187)
T KOG0579|consen 119 IMLELG-RVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRDSFIG 192 (1187)
T ss_pred HHHHhc-cccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccch--hHHhhhccccC
Confidence 775443 479999999999999999999999 999999999999999999999999999985422 11222346789
Q ss_pred CCCcCChhhh-----ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 668 SFGYLDPEYF-----RRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 668 t~~y~aPE~~-----~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
|+.|||||+. ...+|+.++||||||+.|.||..+.+|.....+.. +.-.+.+... |.|. .+
T Consensus 193 TPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR-------VllKiaKSeP-----PTLl--qP 258 (1187)
T KOG0579|consen 193 TPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKSEP-----PTLL--QP 258 (1187)
T ss_pred CcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH-------HHHHHhhcCC-----Cccc--Cc
Confidence 9999999976 46799999999999999999999999875443321 0000111110 1111 23
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......|.+++.+||.+||+.||++.+++++
T Consensus 259 S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 259 SHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred chhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 4566789999999999999999999998754
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.2e-33 Score=301.55 Aligned_cols=258 Identities=23% Similarity=0.237 Sum_probs=193.3
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecC--CcEEEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDER--SEMILVYE 578 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV~E 578 (845)
|+..+.||+|+||.||+|... +++.+|+|+..... ........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456778999999999999865 68899999876532 222234457899999885 99999999999887 88999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++ ++|.+++.... ..++|.+++.++.|++.||+|||+ .+++||||||+||++++ +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~-- 152 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK-- 152 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccccC--
Confidence 997 57877775432 478999999999999999999999 89999999999999999 99999999999764321
Q ss_pred cccccccccCCCcCChhhhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC----------
Q 003139 659 THVSTAVKGSFGYLDPEYFR-RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG---------- 727 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~---------- 727 (845)
.......++..|+|||.+. ++.++.++|||||||++|||++|++||......+ ...+........
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 153 -PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred -CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhhcc
Confidence 1122345788999999765 4567899999999999999999999996543322 112221111110
Q ss_pred -chhhhhccccCC----CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 -MLDQIMDSNLVG----KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 -~~~~~~d~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.......+.... ...+..+..+.+++.+||+.+|++||++.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000000000 0112346789999999999999999999999864
No 322
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.4e-33 Score=305.45 Aligned_cols=262 Identities=20% Similarity=0.280 Sum_probs=197.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..+.||+|++|.||+|+.. +|+.+++|++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999976 68899999875432 2334678899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEeccccCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~~~~~~ 657 (845)
|++ ++|.+++.......+++..+..++.||+.||+|||+ ++++||||||+||++++ ++.+||+|||+++.....
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~- 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP- 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-
Confidence 996 578777754444456888899999999999999998 89999999999999985 567999999999753321
Q ss_pred CcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhh---
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIM--- 733 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--- 733 (845)
........+++.|+|||++.+ ..++.++|||||||++|||++|++||......+.. .. ........ .....
T Consensus 157 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~--~~-~~~~~~~~-~~~~~~~~ 231 (294)
T PLN00009 157 -VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL--FK-IFRILGTP-NEETWPGV 231 (294)
T ss_pred -ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--HH-HHHHhCCC-Chhhcccc
Confidence 111233457889999999876 46799999999999999999999998654322110 00 00000000 00000
Q ss_pred -------c--cccCC----CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 734 -------D--SNLVG----KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 734 -------d--~~l~~----~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
. +.... ...+.....+.+++.+|++.+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00000 0112334568899999999999999999999864
No 323
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.5e-33 Score=302.60 Aligned_cols=244 Identities=24% Similarity=0.359 Sum_probs=194.2
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||+||++... +|+.+++|.+.... ....+.+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999865 68899999875432 22345678899999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.+++.......+++.+++.++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++.... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc---CCccccc
Confidence 999876554579999999999999999999998 8999999999999999999999999999876432 1122334
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.++..|+|||.+.++.++.++|||||||+++||++|+.||......... .. . .... .. .....+...
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~-~----~~~~----~~--~~~~~~~~~ 221 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EE-L----KRRT----LE--MAVEYPDKF 221 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HH-H----Hhcc----cc--ccccCCccC
Confidence 6788999999999888999999999999999999999998654321110 00 0 0000 00 011122334
Q ss_pred HHHHHHHHHHhhhhCCCCCC-----CHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRP-----SMGDVLW 772 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RP-----s~~~vl~ 772 (845)
...+.+++.+||+.+|.+|| ++.+++.
T Consensus 222 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 222 SPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 56788999999999999999 5555654
No 324
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=9.9e-34 Score=300.75 Aligned_cols=244 Identities=26% Similarity=0.333 Sum_probs=196.4
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCCh---HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE---QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||.||+++.. +|+.+++|.+..... ...+.+.+|++++++++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999987 489999998765433 4567889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC------c
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ------T 659 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~------~ 659 (845)
.+++... ..+++..+..++.|++.||+|||+ .+++||||+|+||++++++.+||+|||++........ .
T Consensus 81 ~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENV--GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 9998643 378999999999999999999998 8999999999999999999999999999876432211 1
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.......++..|+|||.+.....+.++||||||++++||++|+.||......+ ..... .....
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~---------~~~~~-- 218 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE------IFQNI---------LNGKI-- 218 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH------HHHHH---------hcCCc--
Confidence 12234567889999999998889999999999999999999999986543211 11111 11011
Q ss_pred CCCHH--HHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 740 KVNPA--SLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 740 ~~~~~--~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
..+.. ....+.+++.+|++.+|.+||++.++.+.|+
T Consensus 219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 01111 2577889999999999999999966555443
No 325
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=331.77 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=206.4
Q ss_pred cCCCcceeeeeeceEEEEEEEEc----C----CcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD----D----GTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERS 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~----~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~ 571 (845)
++..+.+.||+|.||.|++|... . ...||||.+... ...+.+.+..|+++|+.+ +|+||+.++|+|.+.+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 33445558999999999999854 1 346999987754 345678899999999998 6999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCC------------C--CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 572 EMILVYEYMANGPLRSHLYGTD------------L--PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
..++|+||++.|+|.++|+.++ . ..|+..+++.++.|||.|++||++ .++|||||.++||||.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEec
Confidence 9999999999999999997654 0 138899999999999999999998 8999999999999999
Q ss_pred CCCceEEEeccccCCCCCCCCcccccccc--cCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccc
Q 003139 638 DNFVAKVADFGLSKTGPALDQTHVSTAVK--GSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQV 714 (845)
Q Consensus 638 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~ 714 (845)
++..+||+|||+||.....+.... ..-. -...|||||.+....|+.|+|||||||+||||++ |..|+......+
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~-- 529 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE-- 529 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH--
Confidence 999999999999996544222221 1112 3557999999999999999999999999999998 455654322111
Q ss_pred cHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 715 NIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 715 ~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
++ .++.++|. +-+.+..+..++.++++.||+.+|++||++.++++.++..++
T Consensus 530 ~l----~~~l~~G~---------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 530 EL----LEFLKEGN---------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred HH----HHHHhcCC---------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence 11 11222221 223445567889999999999999999999999999998643
No 326
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4e-33 Score=294.32 Aligned_cols=247 Identities=26% Similarity=0.427 Sum_probs=203.4
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh--HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE--QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..+.||+|++|.||+++.. +++.+++|....... ...+.+.+|++++++++|+|++++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677889999999999999876 578899998766543 5667899999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999988544 579999999999999999999998 8999999999999999999999999999986443221
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
......++..|+|||.+.+..++.++||||+|++++||++|+.|+....... ..|.. .. ....
T Consensus 155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~----~~~~~--~~----------~~~~ 217 (254)
T cd06627 155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA----ALFRI--VQ----------DDHP 217 (254)
T ss_pred -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH----HHHHH--hc----------cCCC
Confidence 1234567889999999988889999999999999999999999986432111 01110 00 0111
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
..+......+.+++.+||..+|++||++.+++.
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 223344678889999999999999999999874
No 327
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.4e-33 Score=307.48 Aligned_cols=267 Identities=21% Similarity=0.302 Sum_probs=194.2
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-------
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS------- 571 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------- 571 (845)
++|+..+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|++++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 56888999999999999999976 68899999865432 222345678999999999999999999986654
Q ss_pred -cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 572 -EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 572 -~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
..++||||++ ++|.+.+.... ..+++.+++.++.|++.||+|||+ ++++|+||||+||++++++.+||+|||++
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 3599999996 47777775432 468999999999999999999998 89999999999999999999999999999
Q ss_pred CCCCCCCCc--ccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC
Q 003139 651 KTGPALDQT--HVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG 727 (845)
Q Consensus 651 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~ 727 (845)
......... .......++..|+|||.+.+. .++.++||||||++++||++|++||.....................+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 764332211 112234578889999988764 47899999999999999999999987544332211111110000000
Q ss_pred chh-----hhhcc-ccCCCC---------CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 MLD-----QIMDS-NLVGKV---------NPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 ~~~-----~~~d~-~l~~~~---------~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
... ...+. .+.... .......+.+++.+||+.+|.+||++.+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 00000 000000 00112456789999999999999999999854
No 328
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.1e-33 Score=301.16 Aligned_cols=261 Identities=25% Similarity=0.304 Sum_probs=195.5
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhC---CCCCcceEEEEEecCCc-----
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKL---RHRHLVSLIGYCDERSE----- 572 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~niv~l~g~~~~~~~----- 572 (845)
|++.+.||+|+||.||+|+.+ +++.+|+|++.... ......+.+|+.+++++ .|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566789999999999999987 48999999876432 22234566788777666 59999999999987776
Q ss_pred EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 573 MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.+++|||++ ++|.+++.......+++..++.++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||++..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999997 578888765444469999999999999999999999 8999999999999999999999999999876
Q ss_pred CCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch---
Q 003139 653 GPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML--- 729 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~--- 729 (845)
.... .......++..|+|||.+.+..++.++|||||||++|||++|++||......+. +..+..........
T Consensus 157 ~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 157 YSFE---MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEEWP 231 (287)
T ss_pred ccCC---cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHhcC
Confidence 4321 112234578899999999999999999999999999999999998865432221 11111100000000
Q ss_pred ------hhhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 ------DQIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ------~~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......... ....+.....+.+++.+||+.+|.+||++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000000 01112345678899999999999999999998753
No 329
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=8.6e-34 Score=313.42 Aligned_cols=263 Identities=24% Similarity=0.337 Sum_probs=196.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----CcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER-----SEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~ 573 (845)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467899999999999999999865 68999999886432 33456788999999999999999999987544 357
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++|+||++ ++|..++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 477766633 368999999999999999999999 89999999999999999999999999999764
Q ss_pred CCCCC-cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC---c
Q 003139 654 PALDQ-THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG---M 728 (845)
Q Consensus 654 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~ 728 (845)
..... ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ..+........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~---~~~~~~~~~~~~~~~ 233 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ---LNLILGVLGTPSQED 233 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcCCCCHHH
Confidence 32111 111233568899999998754 5689999999999999999999999965322111 11111111110 0
Q ss_pred hhhhhcccc---------CCC-----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 729 LDQIMDSNL---------VGK-----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 729 ~~~~~d~~l---------~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+.+... ... ..+.....+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111110000 000 011234568899999999999999999999877
No 330
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.3e-33 Score=296.68 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=203.8
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|++.+.||+|+||.||+++.. +++.+++|++... ......++.+|++++++++|+||+++.+++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677889999999999999865 6789999987643 344566788999999999999999999999999999999999
Q ss_pred ccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 580 MANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 580 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
+++++|.+++... ....+++..+..++.|++.||+|||+ .+++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999988542 23568999999999999999999998 89999999999999999999999999999874432
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
......++..|++||.+.+..++.++|+||||+++|||++|+.||......+ +. . .... ..
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~---~-~~~~---------~~ 217 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LR---Y-KVQR---------GK 217 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HH---H-HHhc---------CC
Confidence 2223457889999999999999999999999999999999999986543211 10 0 1111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....+......+.+++.+|++.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 218 YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 122334556778999999999999999999999764
No 331
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.8e-33 Score=305.71 Aligned_cols=264 Identities=25% Similarity=0.313 Sum_probs=197.2
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS----- 571 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~----- 571 (845)
..++|++.+.||+|+||.||+|... +|+.+++|++.... ......+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4567888999999999999999986 58899999876432 223356778999999999999999999987654
Q ss_pred -----cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEe
Q 003139 572 -----EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVAD 646 (845)
Q Consensus 572 -----~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 646 (845)
..++|+||+++ +|...+... ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999976 666666433 3478999999999999999999999 8999999999999999999999999
Q ss_pred ccccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh
Q 003139 647 FGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK 725 (845)
Q Consensus 647 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~ 725 (845)
||+++....... .......++..|+|||.+.+ ..++.++|||||||+++||++|++||......+.. . .......
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~--~-~~~~~~~ 235 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQL--E-LISRLCG 235 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH--H-HHHHHhC
Confidence 999976433221 12223346778999998865 45789999999999999999999998653322111 1 1111111
Q ss_pred cCch---hhhh--------cc------ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 726 KGML---DQIM--------DS------NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 726 ~~~~---~~~~--------d~------~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.... ..+. +. ... ......+..+.+++.+||+.+|.+||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 236 SPCPAVWPDVIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCChhhcccccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0000 00 000 0011235678999999999999999999998753
No 332
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=3.7e-33 Score=310.51 Aligned_cols=263 Identities=21% Similarity=0.289 Sum_probs=198.2
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------ 570 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------ 570 (845)
..++|+..+.||+|+||.||+|... +|+.+|+|++... .....+++.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3477999999999999999999865 6899999987542 334456788899999999999999999988543
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
...++||||++ ++|.+.+.. .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 577777642 28899999999999999999998 89999999999999999999999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc-H--------HHHHH
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN-I--------AEWAM 721 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~-l--------~~~~~ 721 (845)
+.... ........++..|+|||.+.+..++.++|||||||+++||++|+.||.......... + .++..
T Consensus 166 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 166 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eeCCC---CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 76432 112234467889999999999999999999999999999999999986543211100 0 00000
Q ss_pred H-------Hhhc------CchhhhhccccC----CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 722 T-------WQKK------GMLDQIMDSNLV----GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 722 ~-------~~~~------~~~~~~~d~~l~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
. .... ....++....+. ..........+.+++.+||+.||++||++.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000 000111111000 00112345678899999999999999999999865
No 333
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.5e-33 Score=302.56 Aligned_cols=258 Identities=16% Similarity=0.198 Sum_probs=183.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC----CcEEEEEEcCCCChHhH-----------HHHHHHHHHHHhCCCCCcceEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD----GTKVAVKRGNPRSEQGI-----------AEFRTEIEMLSKLRHRHLVSLIGY 566 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~niv~l~g~ 566 (845)
++|.+.++||+|+||.||+|...+ +..+++|.......... .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578889999999999999999764 34566665332221110 112234445566789999999997
Q ss_pred EecCC----cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCce
Q 003139 567 CDERS----EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVA 642 (845)
Q Consensus 567 ~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~ 642 (845)
+.... ..++++|++. .++.+.+.. ....++..+..|+.|+++||+|||+ .+|+||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCcE
Confidence 75443 3467777663 355554432 2346788899999999999999998 899999999999999999999
Q ss_pred EEEeccccCCCCCCCC-----cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHH
Q 003139 643 KVADFGLSKTGPALDQ-----THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIA 717 (845)
Q Consensus 643 kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~ 717 (845)
||+|||+++....... ........||+.|+|||++.+..++.++|||||||+|+||++|+.||......... .
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~--~ 243 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL--I 243 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH--H
Confidence 9999999976432111 11122346999999999999999999999999999999999999999765322211 1
Q ss_pred HHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 718 EWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.-. ..+.+..+....+ ..+..+..+.+++..|++.+|++||++.++++.|
T Consensus 244 ~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 244 HAA----KCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHh----HHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000 0001111111111 1123457788999999999999999999998876
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=9.2e-34 Score=313.33 Aligned_cols=266 Identities=25% Similarity=0.330 Sum_probs=198.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecC--CcEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDER--SEMI 574 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~--~~~~ 574 (845)
.++|+..+.||+|+||.||+|... +|+.+|+|++... .......+.+|+.+++++ +||||++++++|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 456788889999999999999976 5788999987542 334456678899999999 999999999998543 4689
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+||||++ ++|..++... .++|..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++...
T Consensus 86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 9999997 5888887543 68899999999999999999998 899999999999999999999999999998643
Q ss_pred CCCCc---ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH--------H
Q 003139 655 ALDQT---HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM--------T 722 (845)
Q Consensus 655 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~--------~ 722 (845)
..... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......+......... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 32211 12234568899999998765 567899999999999999999999986543322110000000 0
Q ss_pred HhhcCchhhhhccccC------CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 723 WQKKGMLDQIMDSNLV------GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 723 ~~~~~~~~~~~d~~l~------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.........+++.... ....+.....+.+++.+||+.+|.+||++.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000001111110000 01112245678999999999999999999999975
No 335
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=317.65 Aligned_cols=242 Identities=26% Similarity=0.431 Sum_probs=190.2
Q ss_pred eeeeeceEEEEEEEEc-CCcEEE---EEEcC-CCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc--EEEEEEecc
Q 003139 509 LLGVGGFGRVYKGTLD-DGTKVA---VKRGN-PRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE--MILVYEYMA 581 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~-~g~~va---vK~~~-~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--~~lV~Ey~~ 581 (845)
+||+|+|-+||||... +|..|| ||.-+ ..+....++|..|+.+|+.|+||||++++.++.+... +-+|.|.|.
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T 126 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT 126 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence 6999999999999875 465555 33211 2355667899999999999999999999998866554 789999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEeccccCCCCCCCCcc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~~~~~~~~~ 660 (845)
.|+|+.|+... ..++.+.+..||+||++||.|||+.. ++|||||||-+||+|+. -|.+||+|+|||..... .
T Consensus 127 SGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~---s- 199 (632)
T KOG0584|consen 127 SGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK---S- 199 (632)
T ss_pred CCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhc---c-
Confidence 99999999544 46889999999999999999999844 78999999999999985 58999999999987332 2
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
....+.|||.|||||.+. ..|++.+||||||++|+||+|+.-|+..-. +.++ +.+....|.....+.
T Consensus 200 ~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-----n~AQ-IYKKV~SGiKP~sl~------ 266 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-----NPAQ-IYKKVTSGIKPAALS------ 266 (632)
T ss_pred ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-----CHHH-HHHHHHcCCCHHHhh------
Confidence 234588999999999988 789999999999999999999999885322 2221 112222222111111
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.-...++.++|.+||.. ..+|||+.|+|..
T Consensus 267 --kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 267 --KVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred --ccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 11134678999999999 9999999999865
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-33 Score=302.89 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=200.0
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh--HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE--QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|+..+.||+|++|.||++... +++.+++|++..... .....+.+|++++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456678999999999999875 688999998765432 34567889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
++ +|.+++.... ..+++.+++.++.|++.||.|||+ .+|+|+||||+||++++++.+||+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R 153 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence 75 8887775533 579999999999999999999998 899999999999999999999999999997644322 1
Q ss_pred cccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC---chhhhh---
Q 003139 661 VSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG---MLDQIM--- 733 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~--- 733 (845)
......++..|+|||.+.+. .++.++||||||+++|||++|+.||......+.. .-........ ....+.
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL---FKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCchHhcccchhhh
Confidence 22334577889999998876 7899999999999999999999998654332211 0000000000 000000
Q ss_pred --------cccc--CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 734 --------DSNL--VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 734 --------d~~l--~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+... .....+.....+.+++.+||+.+|.+||++++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 001123456789999999999999999999999753
No 337
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.2e-33 Score=304.38 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=195.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~E 578 (845)
++|+..+.||+|+||.||+|..++ ++.+|||.+.... .....++..|+.++.+.+ |+||++++++|.+....++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 457788899999999999999874 8899999876542 334566777888777775 9999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|++ ++|.+++... ...+++..+..++.|+++||+|||+ .++|+||||+|+||++++++.+||+|||++.....
T Consensus 95 ~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~--- 167 (296)
T cd06618 95 LMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD--- 167 (296)
T ss_pred ccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccC---
Confidence 985 4666655432 2478999999999999999999996 25899999999999999999999999999875322
Q ss_pred cccccccccCCCcCChhhhccCC----CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 659 THVSTAVKGSFGYLDPEYFRRQQ----LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~~~~----~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
........++..|+|||.+.+.. ++.++||||||+++|||++|+.||....... +... .+++
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-----~~~~---------~~~~ 233 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-----EVLT---------KILQ 233 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-----HHHH---------HHhc
Confidence 11122345778999999987554 8899999999999999999999985422110 1111 1111
Q ss_pred cccCC-CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 735 SNLVG-KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 735 ~~l~~-~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
..... .........+.+++.+||+.+|.+||++.+++++..
T Consensus 234 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 234 EEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 11100 011134567899999999999999999999987744
No 338
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.1e-33 Score=306.46 Aligned_cols=265 Identities=27% Similarity=0.309 Sum_probs=196.5
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC--CcEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER--SEMIL 575 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~--~~~~l 575 (845)
.++|+..+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357888999999999999999975 68999999875432 22223567899999999999999999998654 56899
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
||||++ ++|.+++.... ..+++.++..++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 47887775432 578999999999999999999999 8999999999999999999999999999976433
Q ss_pred CCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCc---hhh
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGM---LDQ 731 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~ 731 (845)
.. .......++..|+|||.+.+ ..++.++|||||||++|||++|++||......+... -......... ...
T Consensus 161 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 161 PA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLD---LIIQLLGTPNESIWPG 235 (309)
T ss_pred cc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCChhhchh
Confidence 21 11223345788999999865 567999999999999999999999997544322111 0011000000 000
Q ss_pred hhc------cccCCC----C---CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 732 IMD------SNLVGK----V---NPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 732 ~~d------~~l~~~----~---~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+.+ -.+... . .......+.+++.+|++.||++|||+.+++.+-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 000 000000 0 0113456789999999999999999999986533
No 339
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.3e-33 Score=302.43 Aligned_cols=244 Identities=21% Similarity=0.348 Sum_probs=198.0
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCcc
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
..||+|+||.||++... +++.+|+|++........+.+.+|+.++++++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 46999999999999875 68899999887666566678999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccc
Q 003139 587 SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVK 666 (845)
Q Consensus 587 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 666 (845)
+++.. ..+++..+..++.|++.||+|||+ .+++||||||+||++++++.++|+|||++...... ........
T Consensus 106 ~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~--~~~~~~~~ 177 (292)
T cd06657 106 DIVTH---TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKSLV 177 (292)
T ss_pred HHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccc--cccccccc
Confidence 88743 358999999999999999999999 89999999999999999999999999998754321 11123456
Q ss_pred cCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHH
Q 003139 667 GSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASL 746 (845)
Q Consensus 667 gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 746 (845)
|+..|+|||.+.+..++.++|+||||+++|||++|+.||......+. .. .... ...+.+. ......
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~---~~----~~~~-----~~~~~~~--~~~~~~ 243 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MK----MIRD-----NLPPKLK--NLHKVS 243 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HH----HHHh-----hCCcccC--CcccCC
Confidence 88999999999888899999999999999999999999864322111 00 0000 0111110 112234
Q ss_pred HHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 747 KKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 747 ~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+.+++.+||+.+|.+||++.+++.+
T Consensus 244 ~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 244 PSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 567889999999999999999999875
No 340
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.6e-33 Score=306.51 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=196.3
Q ss_pred eeeee--ceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 509 LLGVG--GFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 509 ~LG~G--~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
.||+| +||.||+++.. +|+.||+|..... .....+.+.+|+.+++.++||||+++++++..++..++|+||++++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 46666 89999999875 7899999987643 3445578899999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc---
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH--- 660 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~--- 660 (845)
+|.+++.......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+|++||+.+..........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV 161 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence 99998876544568999999999999999999998 899999999999999999999999998653321111100
Q ss_pred --cccccccCCCcCChhhhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH--------------
Q 003139 661 --VSTAVKGSFGYLDPEYFRRQ--QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT-------------- 722 (845)
Q Consensus 661 --~~~~~~gt~~y~aPE~~~~~--~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~-------------- 722 (845)
......++..|+|||++.+. .++.++|||||||+++||++|+.||........ +......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccccchh
Confidence 01112345679999999764 578999999999999999999999965432211 0000000
Q ss_pred --H-------hh---------cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 723 --W-------QK---------KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 723 --~-------~~---------~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
. .. ......+.+..+...........+.+++.+||+.+|++|||+.+++++-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 0 00 000001111111112233456788999999999999999999999877554
No 341
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-34 Score=314.89 Aligned_cols=267 Identities=26% Similarity=0.367 Sum_probs=207.2
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC------cEEEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS------EMILVYE 578 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~------~~~lV~E 578 (845)
.+.||+|+||.||+|+++ .|+.||||.++... ....+...+|+++|++++|+|||++.+.-++.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 347999999999999965 79999999887643 344567789999999999999999998865543 6789999
Q ss_pred eccCCCccccccCC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC----CCCceEEEeccccCCC
Q 003139 579 YMANGPLRSHLYGT-DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD----DNFVAKVADFGLSKTG 653 (845)
Q Consensus 579 y~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~----~~~~~kl~DFGla~~~ 653 (845)
||.+|+|+..|... +...|++.+.+.++.+++.||.|||+ ++|+||||||.||++- ..-.-||+|||.||..
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 99999999999765 34579999999999999999999998 9999999999999993 3335799999999984
Q ss_pred CCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
+ +........||..|++||.+.. +.|+..+|.|||||++||..||..||.+........-..|.....+...+.-.
T Consensus 175 ~---d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~ 251 (732)
T KOG4250|consen 175 D---DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIG 251 (732)
T ss_pred C---CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEe
Confidence 4 4446778999999999999985 88999999999999999999999999765544322222333222221111111
Q ss_pred hccccCC------------CCCHHHHHHHHHHHHHhhhhCCCCCC--CHHHHHHHHHHhhh
Q 003139 733 MDSNLVG------------KVNPASLKKFGETAEKCLAEHGVDRP--SMGDVLWNLEYALQ 779 (845)
Q Consensus 733 ~d~~l~~------------~~~~~~~~~l~~l~~~cl~~~p~~RP--s~~~vl~~L~~~~~ 779 (845)
.++...+ ...+.....+-..+..++..+|++|- ...+.-..+..+++
T Consensus 252 ~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 252 AQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred eecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 1222221 12345566677788888999999998 66666666666654
No 342
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.4e-33 Score=295.26 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=192.9
Q ss_pred HHHHHHhcCCCcceee--eeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Q 003139 495 QEILDATNKFDESLLL--GVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDER 570 (845)
Q Consensus 495 ~el~~at~~f~~~~~L--G~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~ 570 (845)
.++....++|+..+.+ |+|+||.||++..+ ++..+++|.......... |+.....+ +|||++++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 4445555677776666 99999999999865 678899998654321111 22222222 799999999999999
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-ceEEEeccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-VAKVADFGL 649 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DFGl 649 (845)
+..++||||+++++|.+++... ..++|.++..++.|+++||.|||+ .+++||||||+||+++.++ .++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 9999999999999999998654 379999999999999999999999 8999999999999999988 999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCch
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGML 729 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 729 (845)
++.... .....++..|+|||++.+..++.++||||||++++||++|+.||..... +......|....
T Consensus 157 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~------ 223 (267)
T PHA03390 157 CKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQ------ 223 (267)
T ss_pred ceecCC------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhh------
Confidence 875332 1234678899999999999999999999999999999999999974322 222222222211
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCC-HHHHHH
Q 003139 730 DQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPS-MGDVLW 772 (845)
Q Consensus 730 ~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs-~~~vl~ 772 (845)
.... .........+.+++.+||+.+|.+||+ ++++++
T Consensus 224 ----~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 ----QKKL--PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----cccC--CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0000 112245567889999999999999996 688874
No 343
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.2e-33 Score=302.74 Aligned_cols=249 Identities=27% Similarity=0.350 Sum_probs=196.7
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
.|+..+.||+|+||.||+|+.. +++.+++|.... ......+++.+|+++++.++|+|++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3556678999999999999975 578899998653 233445678899999999999999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+. |+|.+.+.... .++++.++..++.|++.||.|||+ .+++||||||+|||+++++.+||+|||++.....
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 167 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 167 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence 996 67777664332 468999999999999999999998 8999999999999999999999999999875322
Q ss_pred cccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 659 THVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 659 ~~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
.....++..|+|||.+. ...++.++|||||||++|||++|+.|+......+ ........ .
T Consensus 168 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~-~------- 230 (308)
T cd06634 168 ---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQN-E------- 230 (308)
T ss_pred ---cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH------HHHHHhhc-C-------
Confidence 12345788999999974 3568899999999999999999999985432211 11111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
............+.+++.+||+.+|++||++.+++......
T Consensus 231 -~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~ 271 (308)
T cd06634 231 -SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL 271 (308)
T ss_pred -CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccc
Confidence 00111224556788999999999999999999998775433
No 344
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.5e-33 Score=311.65 Aligned_cols=262 Identities=23% Similarity=0.310 Sum_probs=198.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----Cc
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER-----SE 572 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~ 572 (845)
.++|...+.||+|+||.||+|+.. +++.||+|++... ......++.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888999999999999999865 6889999987643 233345678899999999999999999988544 35
Q ss_pred EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 573 MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.++|+||+. ++|.+++... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 899999995 6888887543 469999999999999999999998 8999999999999999999999999999986
Q ss_pred CCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHh-------
Q 003139 653 GPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQ------- 724 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~------- 724 (845)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|++||......+.. .......
T Consensus 158 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~~~ 232 (337)
T cd07858 158 TSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQL---KLITELLGSPSEED 232 (337)
T ss_pred cCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHH---HHHHHHhCCCChHH
Confidence 43211 22234467889999998865 56899999999999999999999998653221110 0000000
Q ss_pred ----hcCchhhhhccccC------CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 725 ----KKGMLDQIMDSNLV------GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 725 ----~~~~~~~~~d~~l~------~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......+.++.... ....+.....+.+++.+||+.+|++||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00001111100000 00112345678899999999999999999999987
No 345
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.4e-33 Score=304.60 Aligned_cols=261 Identities=22% Similarity=0.212 Sum_probs=194.5
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCcc
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
.+|.|+++.||++.. +++.+|+|++... .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 345556666666655 5899999987644 4556678999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC-----ccc
Q 003139 587 SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ-----THV 661 (845)
Q Consensus 587 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~-----~~~ 661 (845)
+++.......+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||.+........ ...
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~ 164 (314)
T cd08216 88 DLLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDF 164 (314)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccc
Confidence 99876544568999999999999999999998 8999999999999999999999999999865332111 111
Q ss_pred ccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHH----hhcC-------c
Q 003139 662 STAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTW----QKKG-------M 728 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~----~~~~-------~ 728 (845)
.....++..|+|||.+.. ..++.++|||||||++|||++|+.||........ +.+..... .... .
T Consensus 165 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 165 PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred cccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCC
Confidence 223456788999999876 4588999999999999999999999975432211 11100000 0000 0
Q ss_pred hhh----hhcccc----CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 729 LDQ----IMDSNL----VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 729 ~~~----~~d~~l----~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
... ..++.. ...........+.+++.+||+.+|++|||+.+++++-.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000 000000 00112334567889999999999999999999987644
No 346
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.9e-33 Score=295.42 Aligned_cols=242 Identities=22% Similarity=0.270 Sum_probs=188.8
Q ss_pred eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHH-HhCCCCCcceEEEEEecCCcEEEEEEeccC
Q 003139 508 LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEML-SKLRHRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l-~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+.||+|+||.||+|... +|+.+|+|...... ......+..|..++ ...+|+|++++++++.+++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999875 68899999876543 22233445555544 455899999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++.... .
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~ 150 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N 150 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence 9999998543 468899999999999999999999 8999999999999999999999999999875322 2
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
....++..|+|||.+.+..++.++||||||++++||++|..||......+ .... ...+.. .......
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~-~~~~~~------~~~~~~~ 217 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA------VFDN-ILSRRI------NWPEEVK 217 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH------HHHH-HHhccc------CCCCccc
Confidence 23457889999999998889999999999999999999999996433211 1111 011000 0011112
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..++..+.+++.+||+.+|++||++.++.+.
T Consensus 218 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 218 EFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred ccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 2345778999999999999999977655443
No 347
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-33 Score=311.56 Aligned_cols=266 Identities=18% Similarity=0.273 Sum_probs=200.9
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEe----cCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCD----ERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~----~~~~~ 573 (845)
..+|+..+.||+|+||.||+|... +|+.|++|++.... ....+.+.+|+.++++++||||+++.+++. .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999865 68999999876542 234567788999999999999999998875 33568
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+. ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6898888543 458999999999999999999998 89999999999999999999999999999764
Q ss_pred CCCCC--cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh-----
Q 003139 654 PALDQ--THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK----- 725 (845)
Q Consensus 654 ~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~----- 725 (845)
..... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||......... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~---~~~~~~~g~~~~~ 234 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQL---KLILSVLGSPSEE 234 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHH---HHHHHHhCCChhH
Confidence 32221 111234568889999999865 56899999999999999999999999654332211 11111000
Q ss_pred ------cCchhhhhccc-cCCC-----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 726 ------KGMLDQIMDSN-LVGK-----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 726 ------~~~~~~~~d~~-l~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
...+.+..+.. .... ..+.....+.+++.+||+.+|++||++.+++.+-.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 00111111100 0000 11234677899999999999999999999987644
No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.3e-32 Score=300.92 Aligned_cols=244 Identities=27% Similarity=0.376 Sum_probs=193.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
|...+.||+|+||.||+|+.. +|+.+++|++... .....+++.+|++++++++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 455567999999999999875 6889999987543 334456788999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
+. |+|.+++... ..++++.+++.++.|++.||.|||+ .+++||||||+||++++++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 96 5777666433 3468999999999999999999998 8999999999999999999999999999864221
Q ss_pred ccccccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 660 HVSTAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.....|+..|+|||++. ...++.++|||||||++|||++|++|+....... .........
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~------~~~~~~~~~--------- 236 (313)
T cd06633 174 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQND--------- 236 (313)
T ss_pred --CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcC---------
Confidence 12356788999999984 4678999999999999999999999986543211 111111110
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
............+.+++.+||+.+|.+||++.+++..
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 237 SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011112234568899999999999999999999865
No 349
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=287.73 Aligned_cols=240 Identities=26% Similarity=0.332 Sum_probs=199.6
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|+..++||+|.||+|-+++-+ .|+.+|+|++++. ...+...-+.|-++|+..+||.+..|-..+...+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 56888899999999999999855 7889999987764 3445566788999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
||..||.|.-+|... ..+++....-+-..|..||.|||+ .+||.||||.+|.|||++|++||+||||++....
T Consensus 248 eyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-- 320 (516)
T KOG0690|consen 248 EYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-- 320 (516)
T ss_pred EEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhccc--
Confidence 999999999998543 468888888899999999999999 9999999999999999999999999999986432
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
........+||+.|+|||++....|..++|.|.+||+||||+|||.||.......-..+ ++-..+
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL---------------Il~ed~ 385 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL---------------ILMEDL 385 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH---------------HHhhhc
Confidence 33345678999999999999999999999999999999999999999975433221111 111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCC
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRP 765 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RP 765 (845)
.++.....+...|+...|.+||.+|.
T Consensus 386 --kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 386 --KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 24444555667788889999999995
No 350
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.3e-33 Score=299.66 Aligned_cols=263 Identities=24% Similarity=0.327 Sum_probs=196.9
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|+..+.||+|++|.||+|+.. +++.+++|++..... .......+|+..+++++ |+|++++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 456778999999999999976 578899998765422 22234457999999999 999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
+|+|.+++.......+++.+++.++.|++.+|.|||+ .+++|+||+|+||++++++.++|+|||+++.... ..
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~---~~ 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS---RP 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccC---CC
Confidence 8899988866554578999999999999999999998 8999999999999999999999999999976332 11
Q ss_pred cccccccCCCcCChhhhc-cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc----------HHHHHHHHhhcCch
Q 003139 661 VSTAVKGSFGYLDPEYFR-RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN----------IAEWAMTWQKKGML 729 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~-~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~----------l~~~~~~~~~~~~~ 729 (845)
......++..|+|||.+. ...++.++|+||||++++||++|++||......+... -..|..........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 123345788999999875 4568999999999999999999999986543322110 00011110000000
Q ss_pred hhhhcccc---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 730 DQIMDSNL---VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 730 ~~~~d~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+.... .....+.....+.+++.+||+.+|++||++.|++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 234 GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00000000 000111124678899999999999999999998754
No 351
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.1e-32 Score=296.06 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=187.6
Q ss_pred eeeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHH---HHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 509 LLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIE---MLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~---~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
+||+|+||.||++... +++.||+|.+.... ......+..|.. .++...||||+++.+++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 58899999875432 122223444443 4445679999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|..++... ..+++.++..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+++..... .
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~----~ 151 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK----K 151 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----C
Confidence 99999888543 479999999999999999999998 89999999999999999999999999998753221 1
Q ss_pred ccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 662 STAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
.....|+..|+|||.+.++ .++.++||||+||+++||++|+.||........... ..... ..+ ..
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~------~~~----~~ 217 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMTL------TMA----VE 217 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----HHHhh------ccC----CC
Confidence 2234689999999998754 689999999999999999999999975432221110 00000 001 11
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
.+......+.+++.+|+..+|.+|| ++.+++++
T Consensus 218 ~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 218 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 2233456788999999999999999 89898754
No 352
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.2e-33 Score=308.65 Aligned_cols=260 Identities=22% Similarity=0.303 Sum_probs=193.0
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------C
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------S 571 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~ 571 (845)
.++|...+.||+|+||.||+|+.. +|+.+|+|++... .......+.+|++++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999865 6899999987643 223345688999999999999999999998654 3
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
..++|+||+.. +|..++ ...+++..+..++.|+++||+|||+ .+++||||||+|||+++++.+||+|||+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 46999999964 666554 2358999999999999999999998 899999999999999999999999999987
Q ss_pred CCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHH--------HH
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWA--------MT 722 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~--------~~ 722 (845)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||............... ..
T Consensus 166 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 166 HADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 6322 1223467889999999876 56899999999999999999999999754321111000000 00
Q ss_pred HhhcCchhhhhcc--cc-CCCC---CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 723 WQKKGMLDQIMDS--NL-VGKV---NPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 723 ~~~~~~~~~~~d~--~l-~~~~---~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...........+. .. .... .+.....+.+++.+||+.+|++||++.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000000 00 0000 01234567899999999999999999999865
No 353
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.7e-33 Score=307.95 Aligned_cols=274 Identities=20% Similarity=0.270 Sum_probs=204.5
Q ss_pred ccccHHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEE
Q 003139 490 RLFMFQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGY 566 (845)
Q Consensus 490 ~~~~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~ 566 (845)
+.....++...+++|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++.++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 45566788889999999999999999999999864 6889999987643 23335678899999999999999999998
Q ss_pred EecC------CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC
Q 003139 567 CDER------SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF 640 (845)
Q Consensus 567 ~~~~------~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~ 640 (845)
+... ...++++|++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeecccccccccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCCC
Confidence 8543 3468888887 7888887743 358999999999999999999999 8999999999999999999
Q ss_pred ceEEEeccccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHH-H
Q 003139 641 VAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIA-E 718 (845)
Q Consensus 641 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~-~ 718 (845)
.+||+|||+++.... ......++..|+|||.+.+ ..++.++|||||||+++||++|+.||............ .
T Consensus 158 ~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 158 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 999999999876322 1234567889999999876 57889999999999999999999998643322111000 0
Q ss_pred H-------HHHHhhcCchhhh---hccccCCC---CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 719 W-------AMTWQKKGMLDQI---MDSNLVGK---VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 719 ~-------~~~~~~~~~~~~~---~d~~l~~~---~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+ ............. ++...... ........+.+++.+|++.+|.+||++.+++.+-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 0 0000000000000 00000000 00112456789999999999999999999987743
No 354
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4e-33 Score=298.98 Aligned_cols=249 Identities=24% Similarity=0.357 Sum_probs=203.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV 576 (845)
++|...+.||+|+||.||+|+.. +|+.+++|..... .....+.+..|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36788889999999999999976 6899999987642 2344567889999999998 99999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+++++|.+++... ..+++..++.|+.|++.||.|||+ .+++|+||||+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 9999999999998644 479999999999999999999998 89999999999999999999999999998764322
Q ss_pred CCc------------------ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHH
Q 003139 657 DQT------------------HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAE 718 (845)
Q Consensus 657 ~~~------------------~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~ 718 (845)
... .......++..|+|||.+....++.++||||||++++||++|+.|+....... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---~-- 230 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL---T-- 230 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH---H--
Confidence 210 11223457889999999998889999999999999999999999986443111 0
Q ss_pred HHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCH----HHHHH
Q 003139 719 WAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSM----GDVLW 772 (845)
Q Consensus 719 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~----~~vl~ 772 (845)
...+.+ ....++...+..+.+++.+||+.+|.+||++ +++++
T Consensus 231 ----------~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 ----------FQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ----------HHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111 1112334446778999999999999999999 77654
No 355
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2e-32 Score=295.59 Aligned_cols=255 Identities=24% Similarity=0.266 Sum_probs=199.3
Q ss_pred CCCcceeeeeeceEEEEEEEEc----CCcEEEEEEcCCCC----hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD----DGTKVAVKRGNPRS----EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
+|+..+.||+|++|.||+++.. +++.+|+|.+.... ....+.+.+|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3667789999999999999743 56789999875432 23346788999999999 599999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999988543 468999999999999999999998 89999999999999999999999999998764
Q ss_pred CCCCCcccccccccCCCcCChhhhccCC--CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQ--LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
... .........|+..|+|||.+.+.. .+.++||||||++++||++|+.||...... ....++....
T Consensus 156 ~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~-------- 224 (288)
T cd05583 156 LAE-EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRI-------- 224 (288)
T ss_pred ccc-cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHH--------
Confidence 322 111122356889999999987665 789999999999999999999998532211 1111111111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
... ....+......+.+++.+||+.+|++|||+.++.+.|+.
T Consensus 225 -~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 225 -LKS--KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -Hcc--CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 110 111233345678899999999999999999888776553
No 356
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.9e-33 Score=306.49 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=202.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----cEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-----EMI 574 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-----~~~ 574 (845)
+|+..+.||+|++|.||+|+.. .++.+++|++.... ....+.+.+|+++++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777889999999999999976 48899999876543 344578899999999999999999999997765 789
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+||||++ ++|.+++... .++++..++.++.|++.||+|||+ .+|+||||||+|||+++++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 5788887543 379999999999999999999999 899999999999999999999999999998644
Q ss_pred CCCC-cccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh-------
Q 003139 655 ALDQ-THVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK------- 725 (845)
Q Consensus 655 ~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~------- 725 (845)
.... ........++..|+|||.+.+. .++.++||||||++++||++|++||......+.. ........
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~ 231 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQL---NLIVEVLGTPSEEDL 231 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHH---HHHHHhcCCCChhHh
Confidence 3211 0112344678899999999887 8999999999999999999999999755432211 00100000
Q ss_pred ----cCchhhhhcc-ccC-----CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 726 ----KGMLDQIMDS-NLV-----GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 726 ----~~~~~~~~d~-~l~-----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.......+.. ... ....+.....+.+++.+||+.+|++||++.+++.+-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 0000111110 000 001122456788999999999999999999998763
No 357
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-32 Score=296.83 Aligned_cols=252 Identities=23% Similarity=0.290 Sum_probs=196.3
Q ss_pred CCCcceeeeeeceEEEEEEEE----cCCcEEEEEEcCCCC----hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 503 KFDESLLLGVGGFGRVYKGTL----DDGTKVAVKRGNPRS----EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
+|+..+.||+|+||.||+++. .+|..+|+|++.... ....+.+.+|++++.++ +|+||+++.+++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367788999999999999986 368899999876432 22346788899999999 599999999999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
++||||+++++|.+++... ..+++..+..++.|+++||.|||+ .+++||||||+|||+++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999998644 468899999999999999999998 99999999999999999999999999999764
Q ss_pred CCCCCcccccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQ 731 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 731 (845)
.. ..........|+..|+|||.+.. ..++.++||||||+++|||++|+.|+...... .....+.......
T Consensus 156 ~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~----- 227 (290)
T cd05613 156 HE-DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS----- 227 (290)
T ss_pred cc-ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc-----
Confidence 32 11112224568899999999875 34788999999999999999999998643221 1111111111110
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCC-----CHHHHHHH
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRP-----SMGDVLWN 773 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP-----s~~~vl~~ 773 (845)
....+......+.+++.+|++.+|++|| +..+++.+
T Consensus 228 ------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 ------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0112334556788999999999999997 56666543
No 358
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.2e-33 Score=303.76 Aligned_cols=248 Identities=25% Similarity=0.338 Sum_probs=207.7
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
..+.|.+.+.||+|.|+.|.+|++. .+..||+|.+++.. ....+.+.+|+++|+.++|||||+++.+......+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3567888999999999999999975 68999999887653 33445688999999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+.+|.+.++|.... .+.......+..|+.++++|||+ +.|+|||||++||||+.+.++||+|||++...
T Consensus 134 ~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~--- 205 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFF--- 205 (596)
T ss_pred EEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceee---
Confidence 99999999999996553 56668888999999999999999 99999999999999999999999999999763
Q ss_pred CCcccccccccCCCcCChhhhccCCC-CchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQL-TEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
+........+|++.|.|||++.+.++ .+++|+||+|++||-|++|..||++..-.+ +-++
T Consensus 206 ~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-------------------Lr~r 266 (596)
T KOG0586|consen 206 DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-------------------LRPR 266 (596)
T ss_pred cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-------------------ccch
Confidence 34445567899999999999998776 589999999999999999999998643322 1112
Q ss_pred ccCCC--CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 736 NLVGK--VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 736 ~l~~~--~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.+.+. ++.-....+.++++++|..+|.+|++++++.+.-
T Consensus 267 vl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 267 VLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred heeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 22222 2333445677899999999999999999987653
No 359
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.2e-32 Score=300.98 Aligned_cols=266 Identities=24% Similarity=0.312 Sum_probs=199.7
Q ss_pred HHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec-CC
Q 003139 496 EILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE-RS 571 (845)
Q Consensus 496 el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~ 571 (845)
++...+++|+..+.||+|+||.||++... +++.+|+|++... .....+.+..|++++++++||||+++.+++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34557789999999999999999999865 7889999986532 22344678899999999999999999998865 56
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
..++|+||+ +++|..++.. .++++.....++.|+++||+|||+ .+|+||||||+|||+++++.+||+|||+++
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999998 5688887743 357888899999999999999999 899999999999999999999999999987
Q ss_pred CCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc-H--------HHHHH
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN-I--------AEWAM 721 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~-l--------~~~~~ 721 (845)
.... ......++..|+|||.+.+ ..++.++||||||++++||++|++||.......... + .+|..
T Consensus 157 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 157 IQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 5322 1123456788999998766 578999999999999999999999986543211100 0 01111
Q ss_pred HHhhcCchhhhhccccCCCCC-----HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLVGKVN-----PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~-----~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..........+.........+ +.....+.+++.+||+.+|++||++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 111111111111101111111 1234678899999999999999999998755
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.5e-32 Score=291.73 Aligned_cols=249 Identities=26% Similarity=0.362 Sum_probs=194.4
Q ss_pred CCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCC-----CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNP-----RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~-----~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
+|.+.+.||+|+||.||+++... +..+++|.... .......++..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47778899999999999998653 34444444332 1223344677899999999999999999999999999999
Q ss_pred EEeccCCCccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 577 YEYMANGPLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
|||+++++|.+++.. .....+++.+++.++.|++.||.|||+ .+++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999988753 234579999999999999999999998 99999999999999986 469999999987643
Q ss_pred CCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc
Q 003139 655 ALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD 734 (845)
Q Consensus 655 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d 734 (845)
.. ........|+..|+|||.+.+..++.++|+||||+++|||++|+.|+..... ....... ..
T Consensus 157 ~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~------~~~~~~~---------~~ 219 (260)
T cd08222 157 GS--CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF------LSVVLRI---------VE 219 (260)
T ss_pred CC--cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHH---------Hc
Confidence 21 1222345678899999999888899999999999999999999999853221 1111111 11
Q ss_pred cccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 735 SNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 735 ~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
......+......+.+++.+||+.+|++||++.++++.
T Consensus 220 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 220 -GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 01112234556788999999999999999999999864
No 361
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.5e-32 Score=299.59 Aligned_cols=268 Identities=25% Similarity=0.291 Sum_probs=193.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-------
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------- 570 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------- 570 (845)
.++|+..+.||+|+||.||+|... +++.+++|++.... ......+.+|++++++++|+||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467899999999999999999976 68899999865432 22234667899999999999999999987443
Q ss_pred -CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 571 -SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 571 -~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
...++|+||+++ +|...+... ...+++.++..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 346999999964 666666433 3469999999999999999999998 8999999999999999999999999999
Q ss_pred cCCCCCCCCc---------ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHH
Q 003139 650 SKTGPALDQT---------HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEW 719 (845)
Q Consensus 650 a~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~ 719 (845)
++........ ...+...+++.|+|||.+.+ ..++.++|||||||+++||++|++||..............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~ 241 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK 241 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9753321111 11233467888999998765 4589999999999999999999999865443221111000
Q ss_pred HHHHhhc------CchhhhhccccCCCCC-------HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 720 AMTWQKK------GMLDQIMDSNLVGKVN-------PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 720 ~~~~~~~------~~~~~~~d~~l~~~~~-------~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
....... ..+....+.......+ ......+.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 0000000 0000000000000011 1123568899999999999999999998753
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.5e-32 Score=301.58 Aligned_cols=264 Identities=20% Similarity=0.246 Sum_probs=194.6
Q ss_pred CCC-cceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHh--------------HHHHHHHHHHHHhCCCCCcceEEEE
Q 003139 503 KFD-ESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQG--------------IAEFRTEIEMLSKLRHRHLVSLIGY 566 (845)
Q Consensus 503 ~f~-~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~niv~l~g~ 566 (845)
+|. ..+.||+|+||.||+|... +++.||+|+........ ...+.+|++++++++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 443 3457999999999999865 68899999865432111 1257789999999999999999999
Q ss_pred EecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEe
Q 003139 567 CDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVAD 646 (845)
Q Consensus 567 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~D 646 (845)
+...+..++||||++ |+|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCEEECC
Confidence 999999999999996 688888853 3468999999999999999999998 9999999999999999999999999
Q ss_pred ccccCCCCCCC------------CcccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCccc
Q 003139 647 FGLSKTGPALD------------QTHVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQ 713 (845)
Q Consensus 647 FGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~ 713 (845)
||+++...... .........++..|+|||.+.+. .++.++|||||||++|||++|++||......+.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 242 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ 242 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99987543100 01111233467889999998764 479999999999999999999999875433221
Q ss_pred ccHHHHHHHHhhcCchhhhhc-----------ccc---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 714 VNIAEWAMTWQKKGMLDQIMD-----------SNL---VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 714 ~~l~~~~~~~~~~~~~~~~~d-----------~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
...............+.+ ... ...........+.+++.+||+.+|++||++.|++.+-.
T Consensus 243 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 243 ---LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred ---HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 111111111100000000 000 00011123466889999999999999999999986543
No 363
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.3e-32 Score=300.22 Aligned_cols=264 Identities=22% Similarity=0.262 Sum_probs=192.5
Q ss_pred CCCcceeeeeeceEEEEEEEEc-C--CcEEEEEEcCCC--ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecC----Cc
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-D--GTKVAVKRGNPR--SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDER----SE 572 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~--g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~----~~ 572 (845)
+|+..+.||+|+||.||++... . +..+|+|++... .....+.+.+|+++++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999975 3 678999987643 223356788999999999 599999999875332 45
Q ss_pred EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 573 MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.++++||++ ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788899885 6888887543 468999999999999999999998 8999999999999999999999999999975
Q ss_pred CCCCCCc--ccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccH---------HHHH
Q 003139 653 GPALDQT--HVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNI---------AEWA 720 (845)
Q Consensus 653 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l---------~~~~ 720 (845)
....... .......|+..|+|||.+.+ ..++.++|||||||+++||++|++||......+.... .++.
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL 234 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 4321111 11233568899999998765 5689999999999999999999999865432111000 0000
Q ss_pred HHHhhcCchhhhhc---ccc---CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 721 MTWQKKGMLDQIMD---SNL---VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 721 ~~~~~~~~~~~~~d---~~l---~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...... ....... ... .....+.....+.+++.+|++.+|++||++.+++..
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 235 SRIGSP-KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred Hhhhhh-hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000 0000000 000 000111234678899999999999999999998755
No 364
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.4e-32 Score=293.47 Aligned_cols=259 Identities=26% Similarity=0.318 Sum_probs=198.2
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
|+..+.||+|++|.||+|+.. +++.+++|...... ....+.+..|++++++++|+|++++++++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 445668999999999999976 58999999877653 333467889999999999999999999999999999999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
+ ++|.+++.... ..+++..+++++.|+++||+|||+ .+|+||||+|+||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 7 58999886543 469999999999999999999999 8999999999999999999999999999976432211
Q ss_pred cccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc-------------
Q 003139 661 VSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK------------- 726 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~------------- 726 (845)
......++..|+|||.+.+. .++.++||||||++++||++|++||......+. ..........
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ---LFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---HHHHHHHhCCCcHHHHHhhcccc
Confidence 12234457789999998776 889999999999999999999998865432111 1111110000
Q ss_pred ---CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 727 ---GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 727 ---~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
........... ....+.....+.+++.+||+.+|++||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 231 DYKPTFPKFPPKDL-EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccccccCccch-HHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000000000 00111235678999999999999999999998753
No 365
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.3e-32 Score=301.57 Aligned_cols=264 Identities=22% Similarity=0.329 Sum_probs=198.3
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERS-- 571 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~-- 571 (845)
+....++|+..+.||+|+||.||+|... +|+.||+|+.... .....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 4445678999999999999999999865 6899999987543 2334567889999999999999999999986543
Q ss_pred ----cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEec
Q 003139 572 ----EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADF 647 (845)
Q Consensus 572 ----~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DF 647 (845)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+ .+|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 458999999 7788887743 368999999999999999999998 89999999999999999999999999
Q ss_pred cccCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccc-c--------HH
Q 003139 648 GLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQV-N--------IA 717 (845)
Q Consensus 648 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~-~--------l~ 717 (845)
|+++.... ......++..|+|||.+.+ ..++.++|+||||++++||++|+.||......... . ..
T Consensus 163 g~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 163 GLARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99976322 1223467889999999876 46899999999999999999999998754321100 0 00
Q ss_pred HHHHHHhhcCchhhhhcc--ccC----CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 718 EWAMTWQKKGMLDQIMDS--NLV----GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~d~--~l~----~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+|....... ........ ... ....+.....+.+++.+|++.+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 238 EFVQKLQSE-DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhhcch-hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 011000000 00000000 000 00112334568899999999999999999999854
No 366
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.98 E-value=4e-33 Score=276.07 Aligned_cols=245 Identities=23% Similarity=0.366 Sum_probs=195.0
Q ss_pred cceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEeccC
Q 003139 506 ESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
....||+|..|.|++.+++ .|..+|||.+... +.++.++++..+.++.+-+ .|.||+.+||+..+...++.||.|.
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs- 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS- 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-
Confidence 3446999999999999976 5889999987654 5566788899999888776 8999999999999999999999983
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
..+..+|. .-.+++++.-+-++...+.+||.||.+ .++|+|||+||+|||+|+.|++|+||||++-..- +....
T Consensus 175 ~C~ekLlk-rik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv---dSkAh 248 (391)
T KOG0983|consen 175 TCAEKLLK-RIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV---DSKAH 248 (391)
T ss_pred HHHHHHHH-HhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee---ccccc
Confidence 33444443 234568888888999999999999987 6899999999999999999999999999986532 33344
Q ss_pred cccccCCCcCChhhhc---cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhc---cc
Q 003139 663 TAVKGSFGYLDPEYFR---RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMD---SN 736 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~---~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d---~~ 736 (845)
+...|.+.|||||.+. ..+|+.++||||||+.|+||.||+.|+..-...-+ .+..+++ |.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe--------------~ltkvln~ePP~ 314 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE--------------VLTKVLNEEPPL 314 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH--------------HHHHHHhcCCCC
Confidence 5667899999999885 34788999999999999999999999875332111 1222222 22
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
|.+ .......+++++..||++|+.+||...+++++
T Consensus 315 L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 221 12356789999999999999999999998765
No 367
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.98 E-value=1.4e-32 Score=304.59 Aligned_cols=265 Identities=21% Similarity=0.301 Sum_probs=194.8
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC----------
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER---------- 570 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~---------- 570 (845)
++|...+.||.|+||.||+|... +|+.|++|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67888999999999999999875 6889999987766556667889999999999999999999776443
Q ss_pred ----CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC-CCCceEEE
Q 003139 571 ----SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD-DNFVAKVA 645 (845)
Q Consensus 571 ----~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~-~~~~~kl~ 645 (845)
...++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 588877743 358899999999999999999998 8999999999999997 56688999
Q ss_pred eccccCCCCCCCC-cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH--
Q 003139 646 DFGLSKTGPALDQ-THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM-- 721 (845)
Q Consensus 646 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~-- 721 (845)
|||+++....... ........++..|+|||.+.. ..++.++|||||||++|||++|+.||....+.+.........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPV 237 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCC
Confidence 9999975322111 111123357889999998754 568899999999999999999999997544322110000000
Q ss_pred ------HHhhcCchhhhhccccCCC-----CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 722 ------TWQKKGMLDQIMDSNLVGK-----VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 722 ------~~~~~~~~~~~~d~~l~~~-----~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..........+.+...... ..+.....+.+++.+||+.+|++||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000000000000000000 011234568899999999999999999999865
No 368
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=6.9e-34 Score=331.30 Aligned_cols=252 Identities=26% Similarity=0.340 Sum_probs=199.7
Q ss_pred hcCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCC--CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNP--RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
+-++.....||.|.||.||-|.. ++|+..|+|.+.. ......+...+|+.++..++|||+|+.+|+-.++++.+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 44566677899999999999984 5799999996543 33455667889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~ 657 (845)
|||++|+|.+.+.... -+++.....+..|++.|+.|||+ ++||||||||.||||+.+|.+|++|||.|.......
T Consensus 1314 EyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999985432 35555666788899999999999 999999999999999999999999999997644321
Q ss_pred C--cccccccccCCCcCChhhhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH-HhhcCchhh
Q 003139 658 Q--THVSTAVKGSFGYLDPEYFRRQ---QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT-WQKKGMLDQ 731 (845)
Q Consensus 658 ~--~~~~~~~~gt~~y~aPE~~~~~---~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~-~~~~~~~~~ 731 (845)
+ ........||+.|||||++.+. .-..+.||||+|||++||+||++||..... +|+.- ....|.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~V~~gh--- 1458 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYHVAAGH--- 1458 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhHHhccC---
Confidence 1 1223467899999999999763 345789999999999999999999964322 24321 111111
Q ss_pred hhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 732 IMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 732 ~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..++|.....+-.+++.+||+.||++|.++.|+++.
T Consensus 1459 ------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 ------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 123455566677889999999999999888876654
No 369
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=1.1e-32 Score=320.19 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=188.1
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec---------
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--------- 569 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------- 569 (845)
-++|++..+||+||||.|||++.+ ||+.+|||++... +........+|+..+++|+|||||+++....+
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 456788889999999999999987 8999999997655 44556678899999999999999997621100
Q ss_pred ---------------------------------------------------------------------C----------
Q 003139 570 ---------------------------------------------------------------------R---------- 570 (845)
Q Consensus 570 ---------------------------------------------------------------------~---------- 570 (845)
+
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred -------------------------------CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 003139 571 -------------------------------SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTG 619 (845)
Q Consensus 571 -------------------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~ 619 (845)
..+||-||||+...|+++++.+.... .-...++++++|++||.|+|+
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~- 715 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHD- 715 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHh-
Confidence 12578899999888888876553221 356778999999999999999
Q ss_pred CCCceeeccCCCCcEEECCCCceEEEeccccCCCC----C------------CCCcccccccccCCCcCChhhhccC---
Q 003139 620 AAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP----A------------LDQTHVSTAVKGSFGYLDPEYFRRQ--- 680 (845)
Q Consensus 620 ~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~~~~--- 680 (845)
.+||||||||.||+||++..+||+|||+|.... . .......+...||.-|+|||++.+.
T Consensus 716 --~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 716 --QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred --CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 999999999999999999999999999997611 0 0111234677899999999999764
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhC
Q 003139 681 QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEH 760 (845)
Q Consensus 681 ~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~ 760 (845)
+|+.|+|+||+|||++||+. ||....++.. +....+++.+..- ..+.......=..+++++++.|
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~------iL~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSMERAS------ILTNLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHHHHH------HHHhcccCCCCCC------cccccccchHHHHHHHHHhcCC
Confidence 59999999999999999974 3543222110 0011112222111 1122333445568999999999
Q ss_pred CCCCCCHHHHHH
Q 003139 761 GVDRPSMGDVLW 772 (845)
Q Consensus 761 p~~RPs~~~vl~ 772 (845)
|.+|||+.|++.
T Consensus 859 P~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 859 PSKRPTATELLN 870 (1351)
T ss_pred CccCCCHHHHhh
Confidence 999999999874
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=6.3e-32 Score=284.75 Aligned_cols=236 Identities=27% Similarity=0.340 Sum_probs=193.4
Q ss_pred eeeeceEEEEEEEEc-CCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 510 LGVGGFGRVYKGTLD-DGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
||+|+||.||++... +++.+++|.+.... ....+.+..|++++++++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999976 58899999876542 23566889999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccccccc
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAV 665 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 665 (845)
.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~ 153 (250)
T cd05123 81 FSHLSKE--GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTF 153 (250)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCC
Confidence 9998544 368999999999999999999998 999999999999999999999999999987643211 123345
Q ss_pred ccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 666 KGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 666 ~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
.++..|++||.+.+...+.++|+||||+++|||++|+.||...... .... .+.... ..++...
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~~~~---------~~~~~~--~~~~~~~ 216 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK------EIYE---------KILKDP--LRFPEFL 216 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHH---------HHhcCC--CCCCCCC
Confidence 6788999999999888999999999999999999999998543221 1111 111111 1233334
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGD 769 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~ 769 (845)
+..+.+++.+|+..+|++||++.+
T Consensus 217 ~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CHHHHHHHHHHhcCCHhhCCCccc
Confidence 677889999999999999999954
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=6.6e-32 Score=299.24 Aligned_cols=262 Identities=22% Similarity=0.297 Sum_probs=198.1
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCc---
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSE--- 572 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~--- 572 (845)
+..++|+..+.||+|++|.||+|+.. +++.+|+|++... +....+.+.+|+.++++++|+|++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 44678999999999999999999976 5788999987643 23344677889999999999999999988765554
Q ss_pred ---EEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 573 ---MILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 573 ---~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999999 6789888753 468999999999999999999998 8999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccccc-H--------HHH
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVN-I--------AEW 719 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~-l--------~~~ 719 (845)
+..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+... + ..+
T Consensus 165 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 165 ARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccc-----cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHH
Confidence 976332 1233467889999999865 468899999999999999999999996543221100 0 000
Q ss_pred HHHHhhcCchhhhhccccCC------CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 720 AMTWQKKGMLDQIMDSNLVG------KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 720 ~~~~~~~~~~~~~~d~~l~~------~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...... ......+...... .........+.+++.+||+.+|++|||+.+|+++
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 240 LQKISS-ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred Hhhccc-hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000 0000111100000 0011235678899999999999999999998765
No 372
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2.5e-31 Score=317.65 Aligned_cols=145 Identities=28% Similarity=0.390 Sum_probs=130.9
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+..|+.+++.++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888899999999999999976 6889999987643 2344577889999999999999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSK 651 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~ 651 (845)
||+++++|.+++... ..+++..++.|+.||+.||+|||+ .+|+||||||+||||+.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998543 368899999999999999999998 899999999999999999999999999986
No 373
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=275.49 Aligned_cols=264 Identities=23% Similarity=0.373 Sum_probs=203.5
Q ss_pred HHHHHHHhcCCCcceeeeeeceEEEEEEE-EcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Q 003139 494 FQEILDATNKFDESLLLGVGGFGRVYKGT-LDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERS 571 (845)
Q Consensus 494 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 571 (845)
++++...|+. +||+|+|+.|--++ +.+|..+|||++.+.......+..+|++++.+.+ |+||++|+.|++++.
T Consensus 75 F~d~YkLt~e-----~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~ 149 (463)
T KOG0607|consen 75 FEDMYKLTSE-----LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT 149 (463)
T ss_pred HHHHHHhHHH-----HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence 4555555543 79999999999887 5689999999998887777788999999999985 999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC---ceEEEecc
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF---VAKVADFG 648 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~DFG 648 (845)
.+|||||-|.||+|..++.+. ..+++.+..++.++|+.||.+||. ++|.||||||+|||..+.. -+||+||.
T Consensus 150 ~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 150 RFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred eEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCceeeeccc
Confidence 999999999999999999655 479999999999999999999999 9999999999999997654 57999999
Q ss_pred ccCCCCCCCC-----cccccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHH
Q 003139 649 LSKTGPALDQ-----THVSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAE 718 (845)
Q Consensus 649 la~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~ 718 (845)
|+.-...... .......+|+..|||||+.. ...|+.+.|.||+|||||-||+|.+||.+.-..+. .
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC----G 300 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC----G 300 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC----C
Confidence 9753211111 11123567899999999763 34688999999999999999999999987655331 1
Q ss_pred HHHH----HhhcCchhhhhccccCCCCCH----HHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 719 WAMT----WQKKGMLDQIMDSNLVGKVNP----ASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 719 ~~~~----~~~~~~~~~~~d~~l~~~~~~----~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
|-+. ..++...+.|-+... +++. .+..+..+++...+..++.+|.++.+++.+
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkY--eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKY--EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCC--cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 2110 011111122222111 2332 245566778888899999999999998874
No 374
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-32 Score=273.87 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=199.9
Q ss_pred hcCCCcc-eeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEe----cCCcE
Q 003139 501 TNKFDES-LLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCD----ERSEM 573 (845)
Q Consensus 501 t~~f~~~-~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~----~~~~~ 573 (845)
|++|.+. ++||-|-.|.|-.+..+ +|+.+|+|.+... ...++|+++--.. .|||||++++++. ....+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 3445443 46999999999998876 7889999987643 3456788876665 6999999999874 45678
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC---CCCceEEEecccc
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD---DNFVAKVADFGLS 650 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~---~~~~~kl~DFGla 650 (845)
++|||.|+||.|...+.+.....++++++-+|..||+.|+.|||+ .+|.||||||+|+|.. .|-.+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecccccc
Confidence 899999999999999988877889999999999999999999999 9999999999999996 4568999999999
Q ss_pred CCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 651 KTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 651 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
+... ........+-|+.|.|||++...+|+...|+||+||++|-||||-+||....... + ..|.-.
T Consensus 212 K~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---i--------spgMk~ 277 (400)
T KOG0604|consen 212 KETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---I--------SPGMKR 277 (400)
T ss_pred cccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---C--------ChhHHh
Confidence 8732 2334456788999999999999999999999999999999999999997654321 1 111111
Q ss_pred hhhccccCCCCC----HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 731 QIMDSNLVGKVN----PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 731 ~~~d~~l~~~~~----~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+|..... +++ ....+...++++..|..+|.+|.|+.+++.+-.
T Consensus 278 rI~~gqy--~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 278 RIRTGQY--EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPW 324 (400)
T ss_pred HhhccCc--cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence 1111111 122 345677888999999999999999999986643
No 375
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=313.50 Aligned_cols=258 Identities=24% Similarity=0.268 Sum_probs=208.9
Q ss_pred HHHHHHHhcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhCCCCCcceEEEEEec
Q 003139 494 FQEILDATNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE 569 (845)
Q Consensus 494 ~~el~~at~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~ 569 (845)
..++.-...+|++.++||+|+||.|..++++ .++.+|.|++++. .......|..|-.+|..-..+-|++|.-.+.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3445555678999999999999999999986 5788999988763 34455779999999999999999999999999
Q ss_pred CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 570 RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 570 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
...+|+|||||+||+|-.++.... +++......++..|..||.-||+ .|+|||||||+|||||..|++||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999995544 78888899999999999999999 9999999999999999999999999999
Q ss_pred cCCCCCCCCcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHh
Q 003139 650 SKTGPALDQTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQ 724 (845)
Q Consensus 650 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~ 724 (845)
+-.+.. +....+...+|||.|.+||++.. +.|...+|+||+||++|||+.|..||.... +++
T Consensus 222 Clkm~~-dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads------lve------ 288 (1317)
T KOG0612|consen 222 CLKMDA-DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS------LVE------ 288 (1317)
T ss_pred HHhcCC-CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH------HHH------
Confidence 866443 34445667899999999999852 678999999999999999999999996432 221
Q ss_pred hcCchhhhhccccCCCCC--HHHHHHHHHHHHHhhhhCCCCCCC---HHHHHHH
Q 003139 725 KKGMLDQIMDSNLVGKVN--PASLKKFGETAEKCLAEHGVDRPS---MGDVLWN 773 (845)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~--~~~~~~l~~l~~~cl~~~p~~RPs---~~~vl~~ 773 (845)
...+|++-.-.-.+| .+..+...+||.+.+ -+|+.|.. ++++..+
T Consensus 289 ---TY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 289 ---TYGKIMNHKESLSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred ---HHHHHhchhhhcCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 223334332112233 345677778887766 47777877 7777654
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.3e-31 Score=278.88 Aligned_cols=221 Identities=19% Similarity=0.149 Sum_probs=177.8
Q ss_pred eceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccccccC
Q 003139 513 GGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG 591 (845)
Q Consensus 513 G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~ 591 (845)
|.+|.||++... +++.+|+|++...+ .+..|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999875 68899999986543 234455566667899999999999999999999999999999998854
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCc
Q 003139 592 TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGY 671 (845)
Q Consensus 592 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y 671 (845)
. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.++++|||++...... .....++..|
T Consensus 79 ~--~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y 148 (237)
T cd05576 79 F--LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVENMY 148 (237)
T ss_pred h--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCccc
Confidence 3 368999999999999999999998 89999999999999999999999999987653221 1233456789
Q ss_pred CChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHH
Q 003139 672 LDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGE 751 (845)
Q Consensus 672 ~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 751 (845)
+|||.+.++.++.++||||+|++++||++|+.|+........ .......+......+.+
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ 207 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------------THTTLNIPEWVSEEARS 207 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------------cccccCCcccCCHHHHH
Confidence 999999888899999999999999999999987643211000 00000122334567889
Q ss_pred HHHHhhhhCCCCCCCHHH
Q 003139 752 TAEKCLAEHGVDRPSMGD 769 (845)
Q Consensus 752 l~~~cl~~~p~~RPs~~~ 769 (845)
++.+|++.||++||++.+
T Consensus 208 li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 208 LLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHccCCHHHhcCCCc
Confidence 999999999999999744
No 377
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-32 Score=281.19 Aligned_cols=241 Identities=25% Similarity=0.356 Sum_probs=199.5
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 576 (845)
.+|....+||+|+||.|.+|.-+ ..+.+|||+++.. ..++.+--+.|-++|+.. +-|.+++|..++..-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 36888899999999999999866 3567999987654 223344456788888876 578999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||+.||+|-.++.+- +.+.+....-++.+||-||-+||+ ++||.||||.+|||||.+|++||+|||+++..-.
T Consensus 429 MEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~- 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF- 502 (683)
T ss_pred EEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccccc-
Confidence 9999999999888543 467788889999999999999999 9999999999999999999999999999986332
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
........+||+.|+|||.+..++|...+|.|||||+||||+.|++||++..+.+ ....+++..
T Consensus 503 -~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---------------lF~aI~ehn 566 (683)
T KOG0696|consen 503 -DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---------------LFQAIMEHN 566 (683)
T ss_pred -CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---------------HHHHHHHcc
Confidence 2334557899999999999999999999999999999999999999998754332 233444443
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCC
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPS 766 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs 766 (845)
. .++.....+...+....+.++|.+|..
T Consensus 567 v--syPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 567 V--SYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred C--cCcccccHHHHHHHHHHhhcCCccccC
Confidence 3 356667778888999999999999953
No 378
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.1e-31 Score=270.35 Aligned_cols=204 Identities=24% Similarity=0.372 Sum_probs=166.7
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEcC-----CcEEEEEEcCCCChH-h-HHHHHHHHHHHHhCCCCCcceEEEEEec-CC
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLDD-----GTKVAVKRGNPRSEQ-G-IAEFRTEIEMLSKLRHRHLVSLIGYCDE-RS 571 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~H~niv~l~g~~~~-~~ 571 (845)
.-..|+....||+|.||.||||.-.+ ...+|+|+++..... + -....+|+.+++.++||||+.|..++.+ +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 34568888899999999999996432 236899988765321 1 2456789999999999999999998866 78
Q ss_pred cEEEEEEeccCCCccccccC---CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC----CceEE
Q 003139 572 EMILVYEYMANGPLRSHLYG---TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN----FVAKV 644 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~----~~~kl 644 (845)
..+|++||.+. +|.+.++- .+...++-..+..|+.||+.|+.|||+ +=|+||||||.||||..+ |.+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEe
Confidence 89999999976 56665542 233578889999999999999999998 779999999999999877 99999
Q ss_pred EeccccCCCCCCCCcc-cccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003139 645 ADFGLSKTGPALDQTH-VSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNP 707 (845)
Q Consensus 645 ~DFGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~ 707 (845)
+|||++|+....-... ....++-|+.|+|||.+.+ +.||.+.|||+.|||+.||++-.+.|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999854433322 3446778999999998876 5799999999999999999999888764
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.3e-30 Score=272.07 Aligned_cols=237 Identities=27% Similarity=0.331 Sum_probs=193.4
Q ss_pred ceEEEEEEEEc-CCcEEEEEEcCCCChHh-HHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccccccC
Q 003139 514 GFGRVYKGTLD-DGTKVAVKRGNPRSEQG-IAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG 591 (845)
Q Consensus 514 ~fg~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~ 591 (845)
+||.||+|+.. +|+.+++|+........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999987 48999999987665544 68899999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCc
Q 003139 592 TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGY 671 (845)
Q Consensus 592 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y 671 (845)
.. .+++..++.++.+++++|.|||+ .+++|+||+|+||++++++.++|+|||.+....... ......++..|
T Consensus 81 ~~--~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~ 152 (244)
T smart00220 81 RG--RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEY 152 (244)
T ss_pred cc--CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCC
Confidence 43 38999999999999999999999 899999999999999999999999999997644321 23345678899
Q ss_pred CChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC-HHHHHHHH
Q 003139 672 LDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN-PASLKKFG 750 (845)
Q Consensus 672 ~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~~~l~ 750 (845)
++||.+.+..++.++||||||++++||++|+.|+......+ .+.++ ..++ ....... ......+.
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~--~~~~~----~~~~--------~~~~~~~~~~~~~~~~ 218 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL--ELFKK----IGKP--------KPPFPPPEWKISPEAK 218 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHH----Hhcc--------CCCCccccccCCHHHH
Confidence 99999998899999999999999999999999986531111 11111 1111 0000000 11556889
Q ss_pred HHHHHhhhhCCCCCCCHHHHHH
Q 003139 751 ETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 751 ~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 9999999999999999999986
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=8.9e-32 Score=286.35 Aligned_cols=245 Identities=23% Similarity=0.320 Sum_probs=198.3
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
.+.||+|-||+||-|+++ +|+.||||.+.+. ..++..++++|+.+|.+++||.||.|...|+..+..+.|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 358999999999999976 7999999987654 33445788999999999999999999999999999999999994 5
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC---CCceEEEeccccCCCCCCCCcc
Q 003139 584 PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD---NFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 584 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~---~~~~kl~DFGla~~~~~~~~~~ 660 (845)
+..+.+...+.+.|+......++.||+.||.|||. ++|+|+||||+||||.+ --++||||||+||+.. ...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg---Eks 721 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG---EKS 721 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecc---hhh
Confidence 55555555666789999888999999999999998 99999999999999964 3489999999999844 444
Q ss_pred cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCC
Q 003139 661 VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGK 740 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~ 740 (845)
....++||+.|+|||+++.+.|...-|+||.|||+|--|+|--||+.... +.+.. ++. .-+.-+ .
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-----IndQI----QNA--aFMyPp----~ 786 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-----INDQI----QNA--AFMYPP----N 786 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-----hhHHh----hcc--ccccCC----C
Confidence 55678999999999999999999999999999999999999999964322 11111 110 001111 1
Q ss_pred CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 741 VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 741 ~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...++....++++...|+..-++|-+...-+.+
T Consensus 787 PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 787 PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred chhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 224455667899999999999999998876543
No 381
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6.9e-31 Score=296.63 Aligned_cols=261 Identities=26% Similarity=0.377 Sum_probs=211.0
Q ss_pred cHHHHHHHhcCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEe--
Q 003139 493 MFQEILDATNKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCD-- 568 (845)
Q Consensus 493 ~~~el~~at~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~-- 568 (845)
.++.+.+-+..|++.+.||.|.+|.||+++. ++++..|+|++...... -++...|.++++.+ .|||++.++|++.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 3444455677889999999999999999985 47899999987765432 35677899999988 6999999999984
Q ss_pred ---cCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEE
Q 003139 569 ---ERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVA 645 (845)
Q Consensus 569 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 645 (845)
.+++++||||||.+||.-+++.+.....+.|..+..|++.+++||.+||. ..++|||||-.||||+.++.+||+
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCcEEEe
Confidence 35689999999999999999987777789999999999999999999998 999999999999999999999999
Q ss_pred eccccCCCCCCCCcccccccccCCCcCChhhhcc-----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHH
Q 003139 646 DFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR-----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWA 720 (845)
Q Consensus 646 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~ 720 (845)
|||++..... .-.......||+.|||||++.- ..|+.++|+||+|++..||--|.+|+.+..+....
T Consensus 166 DFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL------ 237 (953)
T KOG0587|consen 166 DFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL------ 237 (953)
T ss_pred eeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh------
Confidence 9999876322 1222345679999999999853 35778999999999999999999999766553211
Q ss_pred HHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 721 MTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 721 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+.. .|...-.-+.....+|.+++..||.+|-++||++.+++++
T Consensus 238 -F~IpR-------NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 238 -FLIPR-------NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred -ccCCC-------CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 00000 1222222345677899999999999999999999998754
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-31 Score=289.54 Aligned_cols=243 Identities=21% Similarity=0.260 Sum_probs=196.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~E 578 (845)
+..|.....+|.|+|+.|-++... +++..++|++.... .+-.+|+.++... +||||+++.+.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 566777778999999999998865 67889999987652 2234577666665 79999999999999999999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE-CCCCceEEEeccccCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL-DDNFVAKVADFGLSKTGPALD 657 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl-~~~~~~kl~DFGla~~~~~~~ 657 (845)
.+.++-|.+.+.... ... .++..|+.+|+.++.|||+ +++|||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 999998887775443 223 7788899999999999999 999999999999999 69999999999999875432
Q ss_pred CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcccc
Q 003139 658 QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNL 737 (845)
Q Consensus 658 ~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l 737 (845)
....+-|..|.|||++....|++++|+||||++|||||+|+.||....... ++.....
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~------------------ei~~~i~ 527 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI------------------EIHTRIQ 527 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH------------------HHHHhhc
Confidence 234466889999999999999999999999999999999999997543321 1111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHH
Q 003139 738 VGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEY 776 (845)
Q Consensus 738 ~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~ 776 (845)
.+++.........+|+.+||+.+|.+||+|.++..+-..
T Consensus 528 ~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 528 MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 223335566778899999999999999999999876443
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-32 Score=267.77 Aligned_cols=250 Identities=25% Similarity=0.269 Sum_probs=193.2
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC-hHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS-EQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
...||.|+||+|+|-.++ .|+..|||++.... +.+.++++.|.+...+- +.||||+++|.+..++..++.||.|. -
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 346999999999999876 78999999987654 46678899999887766 68999999999999999999999994 4
Q ss_pred Ccccc---ccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcc
Q 003139 584 PLRSH---LYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTH 660 (845)
Q Consensus 584 sL~~~---l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 660 (845)
||..+ .+......+++.-+-.|.....+||.||.+ ...|||||+||+|||||..|.+||||||++-. .....
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGq---Lv~Si 222 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQ---LVDSI 222 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHh---HHHHH
Confidence 55433 233334568888888888999999999987 57899999999999999999999999999865 23344
Q ss_pred cccccccCCCcCChhhhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccC
Q 003139 661 VSTAVKGSFGYLDPEYFRR--QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLV 738 (845)
Q Consensus 661 ~~~~~~gt~~y~aPE~~~~--~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~ 738 (845)
..+...|...|||||.+.. ..|+.+|||||+|+.|+|+.||+-|+..-. ++.+.+........ |.+.
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~Vv~gdp------p~l~ 291 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQVVIGDP------PILL 291 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHHHHcCCC------Ceec
Confidence 4556778889999998853 458999999999999999999998875321 12222222221111 1111
Q ss_pred CC-CCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 739 GK-VNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 739 ~~-~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.. ........+..++..|+.+|-.+||...++.++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11 112355678899999999999999999998765
No 384
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2e-32 Score=268.09 Aligned_cols=269 Identities=24% Similarity=0.341 Sum_probs=196.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEec--------C
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDE--------R 570 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~--------~ 570 (845)
+.|+...+||+|.||+||+|+.+ .|+.||+|+.--.+ +..-...++|+++|..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34455568999999999999866 57788998643322 2222455789999999999999999998843 3
Q ss_pred CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
..+++||.+|+. +|..+|... ...++..++.++..++..||.|+|. ..|+|||+|+.|+||+.++.+||+|||++
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999975 677777433 3578999999999999999999999 89999999999999999999999999999
Q ss_pred CCCCCCCC--cccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhh--
Q 003139 651 KTGPALDQ--THVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQK-- 725 (845)
Q Consensus 651 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~-- 725 (845)
|....... ....+..+-|..|++||.+.+ +.|+++.|||.-||||.||.++.+.+.......+..++...-.-..
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 76433222 112345667999999998775 6899999999999999999999998887665555443332211111
Q ss_pred ------cCchhhhhccc-c-CCCCC--HHHH------HHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 726 ------KGMLDQIMDSN-L-VGKVN--PASL------KKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 726 ------~~~~~~~~d~~-l-~~~~~--~~~~------~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
+-.+.+-+... + .+... ++.. ....+++.+++..||.+|+++.+++.+.-
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 11111111100 1 01100 1111 24668999999999999999999886643
No 385
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-31 Score=276.13 Aligned_cols=265 Identities=20% Similarity=0.253 Sum_probs=205.3
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-C-C----CcceEEEEEecCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-H-R----HLVSLIGYCDERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----niv~l~g~~~~~~~~ 573 (845)
+++|.+..++|+|.||.|-+...+ .+..||||+++... ...+..+-|++++.++. + | -+|++.+|++-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 788999999999999999998755 46889999876543 23355677999999993 2 2 377888999999999
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC----------------
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD---------------- 637 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~---------------- 637 (845)
|||+|.+ |-|+.++|..++..+++..++..|+.|+++++++||+ .+++|-||||+|||+.
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999 6699999998888899999999999999999999999 9999999999999993
Q ss_pred ----CCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCccc
Q 003139 638 ----DNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQ 713 (845)
Q Consensus 638 ----~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~ 713 (845)
++..+||+|||-|..... ....++.|..|+|||++.+-.++..+||||+||||.|+.+|...|+.....++
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~e-----~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH 317 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDHE-----HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH 317 (415)
T ss_pred eccCCCcceEEEecCCcceecc-----CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence 134689999999986222 22567889999999999999999999999999999999999999877664443
Q ss_pred ccHHHHH--------------HHHhhcCch-----------hhhhccccC----CCCCHHHHHHHHHHHHHhhhhCCCCC
Q 003139 714 VNIAEWA--------------MTWQKKGML-----------DQIMDSNLV----GKVNPASLKKFGETAEKCLAEHGVDR 764 (845)
Q Consensus 714 ~~l~~~~--------------~~~~~~~~~-----------~~~~d~~l~----~~~~~~~~~~l~~l~~~cl~~~p~~R 764 (845)
..+-+-+ .+....+.+ ..+.++... -.....+...|.+|+++||..||.+|
T Consensus 318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R 397 (415)
T KOG0671|consen 318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR 397 (415)
T ss_pred HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence 2221111 111111111 111111000 01123456779999999999999999
Q ss_pred CCHHHHHHHHH
Q 003139 765 PSMGDVLWNLE 775 (845)
Q Consensus 765 Ps~~~vl~~L~ 775 (845)
+|+.|++++--
T Consensus 398 iTl~EAL~HpF 408 (415)
T KOG0671|consen 398 ITLREALSHPF 408 (415)
T ss_pred ccHHHHhcCHH
Confidence 99999987643
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=4.6e-30 Score=299.45 Aligned_cols=260 Identities=20% Similarity=0.261 Sum_probs=169.6
Q ss_pred HhcCCCcceeeeeeceEEEEEEEEc-C----CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEE------Ee
Q 003139 500 ATNKFDESLLLGVGGFGRVYKGTLD-D----GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGY------CD 568 (845)
Q Consensus 500 at~~f~~~~~LG~G~fg~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~------~~ 568 (845)
..++|...+.||+|+||.||+|++. + +..||+|++...... +.+..| .+....+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999976 4 688999987643322 111111 1222223333222211 34
Q ss_pred cCCcEEEEEEeccCCCccccccCCCCC------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCC
Q 003139 569 ERSEMILVYEYMANGPLRSHLYGTDLP------------------PLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVK 630 (845)
Q Consensus 569 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik 630 (845)
...+.++||||+++++|.+++...... ......+..|+.|++.||+|||+ ++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence 667899999999999999888643210 11233456799999999999998 899999999
Q ss_pred CCcEEECC-CCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccC----------------------CCCchhH
Q 003139 631 TTNILLDD-NFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQ----------------------QLTEKSD 687 (845)
Q Consensus 631 ~~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~ksD 687 (845)
|+|||+++ ++.+||+|||+++.... ..........+++.|||||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~-~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRV-GINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccc-ccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 68999999999975432 222233456789999999966422 2345679
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCC-------cccccHHHHHHHHhhcCchhhhhccccCC--CCCHHHHHHHHHHHHHhhh
Q 003139 688 VYSFGVVLMEVLCTRPALNPVLP-------REQVNIAEWAMTWQKKGMLDQIMDSNLVG--KVNPASLKKFGETAEKCLA 758 (845)
Q Consensus 688 V~S~Gvvl~Elltg~~p~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~d~~l~~--~~~~~~~~~l~~l~~~cl~ 758 (845)
||||||+||||+++..+.+.... ....++..|....... ..+.+.. +..........+|+.+||+
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR------ASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc------cchhhhhhhhhccccchHHHHHHHHHcc
Confidence 99999999999997655432100 0011112221111000 0000000 0000112234589999999
Q ss_pred hCCCCCCCHHHHHHH
Q 003139 759 EHGVDRPSMGDVLWN 773 (845)
Q Consensus 759 ~~p~~RPs~~~vl~~ 773 (845)
.||++|||+.+++++
T Consensus 436 ~dP~kR~ta~e~L~H 450 (566)
T PLN03225 436 FKGRQRISAKAALAH 450 (566)
T ss_pred CCcccCCCHHHHhCC
Confidence 999999999999876
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=5.9e-30 Score=291.23 Aligned_cols=259 Identities=22% Similarity=0.260 Sum_probs=182.5
Q ss_pred hcCCCcceeeeeeceEEEEEEEE-----------------cCCcEEEEEEcCCCChHhHHHH--------------HHHH
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTL-----------------DDGTKVAVKRGNPRSEQGIAEF--------------RTEI 549 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~~~--------------~~E~ 549 (845)
.++|++.++||+|+||.||+|.+ ..++.||||++........++| ..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999964 2356799999865543333333 3477
Q ss_pred HHHHhCCCCCc-----ceEEEEEec--------CCcEEEEEEeccCCCccccccCCC----------------------C
Q 003139 550 EMLSKLRHRHL-----VSLIGYCDE--------RSEMILVYEYMANGPLRSHLYGTD----------------------L 594 (845)
Q Consensus 550 ~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~----------------------~ 594 (845)
.++.+++|.++ ++++++|.. .+..+|||||+++++|.++|+... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77788876654 678888753 356899999999999999886421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCCh
Q 003139 595 PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDP 674 (845)
Q Consensus 595 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP 674 (845)
..++|..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++..... .........+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~-~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTG-INFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccC-CccCccccCCCcceeCh
Confidence 235788899999999999999998 89999999999999999999999999999753221 11111223347899999
Q ss_pred hhhccCCC----------------------CchhHHHHHHHHHHHHHcCCC-CCCCCCCcc------cccHHHHHHHHhh
Q 003139 675 EYFRRQQL----------------------TEKSDVYSFGVVLMEVLCTRP-ALNPVLPRE------QVNIAEWAMTWQK 725 (845)
Q Consensus 675 E~~~~~~~----------------------s~ksDV~S~Gvvl~Elltg~~-p~~~~~~~~------~~~l~~~~~~~~~ 725 (845)
|.+..... ..+.||||+||+++||++|.. |+....... ..++..|.. ..
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--YK 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--hc
Confidence 98754321 234799999999999999985 553221111 111222221 11
Q ss_pred cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCC---CCCCCHHHHHHH
Q 003139 726 KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHG---VDRPSMGDVLWN 773 (845)
Q Consensus 726 ~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p---~~RPs~~~vl~~ 773 (845)
... ..-...........+++.++|..+| .+|+|+.|++++
T Consensus 458 ~~~--------~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 GQK--------YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccC--------CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 110 0001112334667789999999766 689999999875
No 388
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-31 Score=244.44 Aligned_cols=264 Identities=22% Similarity=0.263 Sum_probs=192.4
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+|+..++||+|.||+||||+.. .++.||+|+..... +.--...++|+.+++.++|+|||++++....++.+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4555678999999999999965 67899999765432 22235678999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
|. .+|..+...- .+.++.+....++.|+++||.++|+ +++.||||||+|.||+.+|+.|++|||++|...-.-
T Consensus 83 cd-qdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgipv-- 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-- 155 (292)
T ss_pred hh-HHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCce--
Confidence 94 4677766433 3578999999999999999999999 999999999999999999999999999998643211
Q ss_pred ccccccccCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHhhcCc---hhhhhc
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQKKGM---LDQIMD 734 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~d 734 (845)
.-....+-|..|++|.++.+. -|+...|+||-|||+.|+.. |++.|.+....++..-+-|......++. +.++-|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 112345678999999998775 57899999999999999986 5555544333332222222211111111 122222
Q ss_pred cccCCCCC---------HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 735 SNLVGKVN---------PASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 735 ~~l~~~~~---------~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
-....-++ +.....=.+++.+.+.-+|.+|.++++.++.
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 11111111 2222334567778888899999999887654
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.7e-31 Score=278.07 Aligned_cols=250 Identities=21% Similarity=0.267 Sum_probs=206.1
Q ss_pred CCcceeeeeeceEEEEEEEEcCCc-EEEEEEcCC---CChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLDDGT-KVAVKRGNP---RSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~g~-~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++....||-||||.|=+++.+... .+|+|.+++ .+.++.+....|-++|.+.+.|.||+|+--+.+.+..|++||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 344557999999999999876433 367775543 3455667888999999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
|-||.|-..|+. ++.++......++..+.+|++|||. ++||.|||||+|.|||.+|-+||.|||+|+... ..
T Consensus 502 ClGGElWTiLrd--Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~---~g 573 (732)
T KOG0614|consen 502 CLGGELWTILRD--RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG---SG 573 (732)
T ss_pred hcCchhhhhhhh--cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhc---cC
Confidence 999999999954 4578889999999999999999999 999999999999999999999999999998743 33
Q ss_pred ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCC
Q 003139 660 HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVG 739 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~ 739 (845)
.....++||+.|.|||.+.++..+.++|.||+|++++|||+|++||....+...-+ .++...-.-
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn---------------~ILkGid~i 638 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN---------------LILKGIDKI 638 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH---------------HHHhhhhhh
Confidence 44567899999999999999999999999999999999999999998765533211 112212222
Q ss_pred CCCHHHHHHHHHHHHHhhhhCCCCCCC-----HHHHHHHHHH
Q 003139 740 KVNPASLKKFGETAEKCLAEHGVDRPS-----MGDVLWNLEY 776 (845)
Q Consensus 740 ~~~~~~~~~l~~l~~~cl~~~p~~RPs-----~~~vl~~L~~ 776 (845)
+++..+.+...+++++.+..+|.+|.. +.||.++-+.
T Consensus 639 ~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 639 EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 456667778889999999999999976 6677666554
No 390
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=272.64 Aligned_cols=255 Identities=27% Similarity=0.344 Sum_probs=194.3
Q ss_pred CCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCC-------ChHhHHHHHHHHHHHHhCCCCCcceEEEEE-ecCCcE
Q 003139 503 KFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPR-------SEQGIAEFRTEIEMLSKLRHRHLVSLIGYC-DERSEM 573 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~H~niv~l~g~~-~~~~~~ 573 (845)
+|-..++||+|||++||||.. ...+-||||+.... .+...+...+|.++-+.|.||.||++++|+ .+...+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 344556799999999999984 45677899974322 122245567899999999999999999998 456678
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC---CCCceEEEecccc
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD---DNFVAKVADFGLS 650 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~---~~~~~kl~DFGla 650 (845)
|-|.|||+|.+|.-+|...+ .+++++...|+.||+.||.||.+ -..+|||-||||.||||. .-|.+||+||||+
T Consensus 544 CTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred eeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 99999999999999996554 68999999999999999999987 447899999999999995 4589999999999
Q ss_pred CCCCCCCCc-----ccccccccCCCcCChhhhcc----CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH
Q 003139 651 KTGPALDQT-----HVSTAVKGSFGYLDPEYFRR----QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM 721 (845)
Q Consensus 651 ~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~----~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~ 721 (845)
+++...... .......||.+|++||.+-- -+.+.|+||||.|||+|..+.|+.||........ +
T Consensus 621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--I----- 693 (775)
T KOG1151|consen 621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--I----- 693 (775)
T ss_pred hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--H-----
Confidence 987653332 23445789999999998743 3578999999999999999999999975443221 1
Q ss_pred HHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003139 722 TWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVL 771 (845)
Q Consensus 722 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl 771 (845)
.++..+.+.-+ ..-...+....+...++++||+..-++|....++.
T Consensus 694 --LqeNTIlkAtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 --LQENTILKATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred --Hhhhchhccee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11111111111 11112244556778899999999999998776653
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=253.91 Aligned_cols=247 Identities=22% Similarity=0.354 Sum_probs=199.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC---ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR---SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV 576 (845)
++|+..++||+|.|.+|..+++. ..+.+|+|.+++. ..+.++-.+.|-.+..+. +||.+|-|..++..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 57889999999999999999976 5678899876543 334455567788888776 799999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
.||+++|+|--++.. +..|+++....+...|+.||.|||+ .+||.||||.+|||||..|++||+|+|+++....
T Consensus 330 ieyv~ggdlmfhmqr--qrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~l~- 403 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG- 403 (593)
T ss_pred EEEecCcceeeehhh--hhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcCCC-
Confidence 999999999877743 3479999999999999999999999 9999999999999999999999999999987433
Q ss_pred CCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCc-ccccHHHHHHHHhhcCchhhhhcc
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPR-EQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
........+||+.|.|||.+++..|...+|.|++||+|+||+.||.||+-.... .+.+..++.-+. +++.
T Consensus 404 -~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv--------ilek 474 (593)
T KOG0695|consen 404 -PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV--------ILEK 474 (593)
T ss_pred -CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH--------Hhhh
Confidence 334456789999999999999999999999999999999999999999743321 122233333222 2222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCC
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRP 765 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RP 765 (845)
.+ .++.....+...+++.-|.+||.+|.
T Consensus 475 qi--riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 475 QI--RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred cc--cccceeehhhHHHHHHhhcCCcHHhc
Confidence 22 24455556677888999999999984
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.8e-29 Score=273.97 Aligned_cols=214 Identities=26% Similarity=0.386 Sum_probs=176.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCC---hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRS---EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV 576 (845)
..-|-.++.||-|+||+|.++.. ++...+|.|.+.+.+ ..+......|-.||....++-||+|+-.+.+++.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 44577788899999999999974 456678999876553 34456678899999999999999999999999999999
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
|||++||++-.+|... +-+.+.....++.++..|+++.|. .|+|||||||+|||||.+|++||+||||+.-....
T Consensus 708 MdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999998888544 457778888889999999999998 99999999999999999999999999998311000
Q ss_pred ---------C-------------------------------CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHH
Q 003139 657 ---------D-------------------------------QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLM 696 (845)
Q Consensus 657 ---------~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ 696 (845)
+ ........+||+.|+|||++....++..+|.||.||||+
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 000112457999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCcc-cccHHHH
Q 003139 697 EVLCTRPALNPVLPRE-QVNIAEW 719 (845)
Q Consensus 697 Elltg~~p~~~~~~~~-~~~l~~~ 719 (845)
||+.|++||....+.+ +..+..|
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeeh
Confidence 9999999998776655 3334444
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=286.23 Aligned_cols=245 Identities=27% Similarity=0.372 Sum_probs=187.9
Q ss_pred CCcceeeeeeceEE-EEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEecc
Q 003139 504 FDESLLLGVGGFGR-VYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 504 f~~~~~LG~G~fg~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
|...+++|.|+-|+ ||+|..+ |+.||||++-... .+-..+|+..|+.- .|||||++++.-.+.+..||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44445789999875 8999997 7899999976443 23456899999988 6999999999989999999999999
Q ss_pred CCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-----CCceEEEeccccCCCC
Q 003139 582 NGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-----NFVAKVADFGLSKTGP 654 (845)
Q Consensus 582 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-----~~~~kl~DFGla~~~~ 654 (845)
..+|.+++... +.....-...+.++.|+++||++||+ .+||||||||+||||+. ..+++|+|||+++...
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56999999763 21112224557889999999999999 99999999999999975 3589999999998755
Q ss_pred CCCCc-ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 655 ALDQT-HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCT-RPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 655 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
..... .......||-||+|||++....-+.++||||+|||+|..++| ..||.....++...+ ..+..+..+
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl-------~~~~~L~~L 735 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL-------TGNYTLVHL 735 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh-------cCccceeee
Confidence 42211 123467799999999999999889999999999999999987 788876554432211 000011100
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
+...++ ...+||.+|+..+|..||++.+|+.
T Consensus 736 -------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 736 -------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred -------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 011122 6779999999999999999999974
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5e-30 Score=253.54 Aligned_cols=264 Identities=25% Similarity=0.343 Sum_probs=200.1
Q ss_pred CcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----CcEEEE
Q 003139 505 DESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER-----SEMILV 576 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~-----~~~~lV 576 (845)
+..+.||-|+||.||.++.. +|+.|++|++... +-...+.+.+|+++|.-++|.|++..++..... +++|.|
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34568999999999999865 7999999987653 233457888999999999999999999877543 367889
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL 656 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~ 656 (845)
.|.| ..+|...+... +.|+-..+.-++.||++||+|||+ .+|.||||||.|.|+++|...||+|||++|.-..
T Consensus 136 TELm-QSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~- 208 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ- 208 (449)
T ss_pred HHHH-HhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEecccccccccch-
Confidence 9998 46788877543 578888999999999999999999 9999999999999999999999999999997443
Q ss_pred CCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHH--------HHHhhcC
Q 003139 657 DQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWA--------MTWQKKG 727 (845)
Q Consensus 657 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~--------~~~~~~~ 727 (845)
++....+..+-|..|+|||.+++ +.|+.+.||||.|||+.||+..|..|....+.++.+++.-. ++..-+|
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEG 288 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEG 288 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhh
Confidence 33444456677889999999987 57999999999999999999999888877777665443211 1111122
Q ss_pred chhhhhccccCCC-------CC--HHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 728 MLDQIMDSNLVGK-------VN--PASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 728 ~~~~~~d~~l~~~-------~~--~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.-..++....... +. ...-.+-..+..+++..+|++|.+..+.+..+.
T Consensus 289 Ak~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 289 AKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 2222222221110 11 112233456777888999999999888876653
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=8.6e-29 Score=236.39 Aligned_cols=195 Identities=26% Similarity=0.341 Sum_probs=162.5
Q ss_pred ceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC-ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEEEEEEeccCC
Q 003139 507 SLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR-SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
...||+|++|.|-+-++. +|+..|+|++... +.+..++.++|+++..+. ..|.+|.++|........++.||.|. -
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-T 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-h
Confidence 346999999999888865 7999999987654 455667888999988776 69999999999999999999999994 5
Q ss_pred CccccccC--CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 584 PLRSHLYG--TDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 584 sL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
||..+-.+ .....+++.-+-+|+..+.+||.|||+ ...+||||+||+||||+.+|++||||||++-... +.-.
T Consensus 130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~---dSiA 204 (282)
T KOG0984|consen 130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLV---DSIA 204 (282)
T ss_pred hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeeh---hhhH
Confidence 77655432 234578888899999999999999998 5789999999999999999999999999986532 2223
Q ss_pred ccccccCCCcCChhhhcc----CCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003139 662 STAVKGSFGYLDPEYFRR----QQLTEKSDVYSFGVVLMEVLCTRPALNP 707 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~~~----~~~s~ksDV~S~Gvvl~Elltg~~p~~~ 707 (845)
.+-..|...|||||.+.. ..|+.|+||||+|+.+.||.+++.|++.
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 344568889999998753 4789999999999999999999999864
No 396
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=3e-27 Score=240.38 Aligned_cols=210 Identities=38% Similarity=0.576 Sum_probs=183.3
Q ss_pred eeeeceEEEEEEEEcC-CcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 510 LGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
||+|.+|.||++...+ ++.+++|+....... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999864 889999998766443 45678999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-CCceEEEeccccCCCCCCCCcccccccc
Q 003139 588 HLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKTGPALDQTHVSTAVK 666 (845)
Q Consensus 588 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~ 666 (845)
++.... ..+++..+..++.+++++|++||+ .+++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~ 154 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIV 154 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhccc
Confidence 986442 468999999999999999999999 89999999999999999 89999999999976433211 123355
Q ss_pred cCCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHH
Q 003139 667 GSFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPAS 745 (845)
Q Consensus 667 gt~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 745 (845)
+...|++||.+... ..+.+.|+|++|++++||
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 77889999999887 889999999999999998
Q ss_pred HHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 746 LKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 746 ~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..+.+++.+|++.+|.+||++.++++.
T Consensus 188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 -PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred -HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 467799999999999999999999864
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.6e-26 Score=237.19 Aligned_cols=199 Identities=33% Similarity=0.449 Sum_probs=172.5
Q ss_pred CCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEecc
Q 003139 504 FDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMA 581 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~ 581 (845)
|+..+.||+|++|.||++...+ ++.+++|........ ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999999875 889999998766544 67889999999999999999999999999999999999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCccc
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHV 661 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 661 (845)
+++|.+++..... .+++..+..++.+++.+|.+||+ .+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-~~~ 155 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL-AAL 155 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-ccc
Confidence 9999999865431 28999999999999999999998 899999999999999999999999999997644321 012
Q ss_pred ccccccCCCcCChhhh-ccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 003139 662 STAVKGSFGYLDPEYF-RRQQLTEKSDVYSFGVVLMEVLCTRPALNP 707 (845)
Q Consensus 662 ~~~~~gt~~y~aPE~~-~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~ 707 (845)
.....++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 2345677889999998 777888899999999999999999999954
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=8.3e-28 Score=244.25 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=191.1
Q ss_pred CCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecC------CcE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDER------SEM 573 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~------~~~ 573 (845)
+|...+.+|.|.- .|..+... .++.||+|+.... .....++..+|..++..+.|+|+++++.++... .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555567888887 56555433 5789999976543 334456778999999999999999999998543 467
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
|+|||+| ..+|.+.+. -.++-+++..|..|++.|++|||+ .+|+||||||+||++..+..+||.|||+|+..
T Consensus 97 y~v~e~m-~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 97 YLVMELM-DANLCQVIL----MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHhh-hhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhhccc
Confidence 9999999 568888775 347778899999999999999999 99999999999999999999999999999873
Q ss_pred CCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcC------
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKG------ 727 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~------ 727 (845)
. ..-..+....|..|.|||++.+..+.+.+||||.||++.||++|+-.|.+.. .+-+|..-...-|
T Consensus 169 ~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-----~idQ~~ki~~~lgtpd~~F 240 (369)
T KOG0665|consen 169 D---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-----HIDQWNKIIEQLGTPDPSF 240 (369)
T ss_pred C---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-----HHHHHHHHHHHhcCCCHHH
Confidence 2 2235567788999999999999889999999999999999999998776432 2223322111000
Q ss_pred ---------------------chhhhh-ccccCC--CCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 728 ---------------------MLDQIM-DSNLVG--KVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 728 ---------------------~~~~~~-d~~l~~--~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
...+.+ |..... +.++.......+++.+||..+|++|-+.++++.+
T Consensus 241 ~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 241 MKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 001111 111111 1112234567789999999999999999998765
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.5e-27 Score=254.06 Aligned_cols=196 Identities=21% Similarity=0.371 Sum_probs=165.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCC--------hHhHHHHHHHHHHHHhCC---CCCcceEEEEEec
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRS--------EQGIAEFRTEIEMLSKLR---HRHLVSLIGYCDE 569 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~ 569 (845)
..|...+.||+|+||.|+.+.++ +...|+||.+.+.. ...+-..-.|+.+|..++ |+||+++++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35778889999999999999987 45678888765432 111223456999999997 9999999999999
Q ss_pred CCcEEEEEEecc-CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 570 RSEMILVYEYMA-NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 570 ~~~~~lV~Ey~~-~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
++..||+||-.. +-+|.+++.- .+.+++.+..-|.+||+.|+++||+ ++|||||||-+||.++.+|.+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~--kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF--KPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc--cCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEeecc
Confidence 999999999764 4477777743 4579999999999999999999999 999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhccCCC-CchhHHHHHHHHHHHHHcCCCCCC
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQL-TEKSDVYSFGVVLMEVLCTRPALN 706 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~ksDV~S~Gvvl~Elltg~~p~~ 706 (845)
.|.. ........++||.+|.|||++.+.+| ...-|||++|++||.++....|+.
T Consensus 716 saa~----~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAY----TKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhh----hcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9865 23344556889999999999999887 456899999999999998888875
No 400
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=9.7e-27 Score=225.34 Aligned_cols=260 Identities=18% Similarity=0.286 Sum_probs=193.6
Q ss_pred hcCCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecC--CcEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDER--SEMILV 576 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~--~~~~lV 576 (845)
.++|++.+.+|+|.+++||.|.. .+.++++||.+++... +.+.+|+.+|..|+ ||||++|++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 45678888999999999999984 4688999999887643 56778999999997 99999999998654 457899
Q ss_pred EEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC-CCCceEEEeccccCCCCC
Q 003139 577 YEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD-DNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 577 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~-~~~~~kl~DFGla~~~~~ 655 (845)
+||+.+.+...+- +.|+...+...+.++++||.|+|+ .||+|||+||.|++|| +...++|+|.|||.....
T Consensus 114 FE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999887766543 467888899999999999999999 9999999999999999 456899999999987543
Q ss_pred CCCcccccccccCCCcCChhhhcc-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHH--------HHhhc
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRR-QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM--------TWQKK 726 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~--------~~~~~ 726 (845)
... ....+.+..|.-||.+-. +.|+..-|+|||||+|.+|+..+.||.......+ .++..+. ....+
T Consensus 186 ~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D-QLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 186 GKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD-QLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred Cce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH-HHHHHHHHhChHHHHHHHHH
Confidence 221 223345667889998864 6789999999999999999999999865443321 1222211 11111
Q ss_pred ------CchhhhhccccCCC-------CCHH-HHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 727 ------GMLDQIMDSNLVGK-------VNPA-SLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 727 ------~~~~~~~d~~l~~~-------~~~~-~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
.....++....... .+.. ...+.++++.+.|..|-.+|||+.|.+.+--
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 11122222111111 0111 2356779999999999999999999887643
No 401
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-25 Score=239.79 Aligned_cols=132 Identities=26% Similarity=0.368 Sum_probs=112.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-----C---CCcceEEEEEe---
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-----H---RHLVSLIGYCD--- 568 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~g~~~--- 568 (845)
.++|...++||.|.|++||++... +.+.||+|+.+.. +...+..+.||++|++++ | ..||+|++.|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 368889999999999999999754 5677999987533 334466788999999984 2 47999999984
Q ss_pred -cCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEE
Q 003139 569 -ERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILL 636 (845)
Q Consensus 569 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl 636 (845)
.+.+.|||+|++ |.+|..+|.......++...+.+|++||+.||.|||.+ .+|||-||||+||||
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 456899999999 77888888877778899999999999999999999984 589999999999999
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3.1e-27 Score=259.36 Aligned_cols=253 Identities=26% Similarity=0.387 Sum_probs=203.7
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
..+|+....+|+|.+|.|||++.. .++..|+|.++........-..+|+-+++..+||||+.++|-+.....+++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 356778889999999999999865 6889999988776666667778899999999999999999999999999999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCc
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQT 659 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~ 659 (845)
|.+|+|++.-+.. +++++.++..+++..++||+|||+ .+-+|||||-.|||+++.+.+|++|||.+-.... .-
T Consensus 94 cgggslQdiy~~T--gplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti 166 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TI 166 (829)
T ss_pred cCCCcccceeeec--ccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhh--hh
Confidence 9999999987544 589999999999999999999999 8999999999999999999999999999854322 12
Q ss_pred ccccccccCCCcCChhhh---ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccc
Q 003139 660 HVSTAVKGSFGYLDPEYF---RRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSN 736 (845)
Q Consensus 660 ~~~~~~~gt~~y~aPE~~---~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~ 736 (845)
.......||+.|||||+. +.+.|..++|||+.|+...|+---++|.....+.... .+.. ....++.
T Consensus 167 ~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l-------~LmT----kS~~qpp 235 (829)
T KOG0576|consen 167 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL-------FLMT----KSGFQPP 235 (829)
T ss_pred hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH-------HHhh----ccCCCCC
Confidence 223567899999999975 4678999999999999999997777776544332211 1111 1112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHH
Q 003139 737 LVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLW 772 (845)
Q Consensus 737 l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~ 772 (845)
-..+ .......|-++++.|+-++|++||+++.+++
T Consensus 236 ~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 236 TLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred cccC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111 1234567889999999999999999988664
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.4e-26 Score=226.08 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=181.2
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEE-EecCCcEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGY-CDERSEMILVY 577 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~-~~~~~~~~lV~ 577 (845)
.+.|++.+.||+|.||.+.++.++. .+.+++|-+. ......++|.+|..---.| .|.||+.-++. ++..+..++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp-~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVP-RPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccC-cchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 3568888999999999999999884 5667788654 3344568899998755555 58999987764 46667788999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC--CCCceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD--DNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~--~~~~~kl~DFGla~~~~~ 655 (845)
||+|.|+|..-+... .+.+....+++.|++.||.|+|+ .++||||||.+||||- +..++||||||+.+....
T Consensus 102 E~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999887543 46677788999999999999999 9999999999999993 455999999999875322
Q ss_pred CCCcccccccccCCCcCChhhhccC-----CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQ-----QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
.......+..|.+||..... ...+.+|||.||++++.++||+.||..... .+....+| ..+.++...
T Consensus 176 -----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~-~d~~Y~~~--~~w~~rk~~ 247 (378)
T KOG1345|consen 176 -----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI-MDKPYWEW--EQWLKRKNP 247 (378)
T ss_pred -----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc-cCchHHHH--HHHhcccCc
Confidence 12234456679999977532 346789999999999999999999974322 22233333 333333222
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVL 771 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl 771 (845)
.+ |+. + ....+++.++-++-+..++++|=-..++.
T Consensus 248 ~~--P~~---F-~~fs~~a~r~Fkk~lt~~~~drcki~~~k 282 (378)
T KOG1345|consen 248 AL--PKK---F-NPFSEKALRLFKKSLTPRFKDRCKIWTAK 282 (378)
T ss_pred cC--chh---h-cccCHHHHHHHHHhcCCcccccchhHHHH
Confidence 21 111 1 12234556677788889999984444433
No 404
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=5.9e-26 Score=242.38 Aligned_cols=264 Identities=22% Similarity=0.245 Sum_probs=197.7
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC------CCCcceEEEEEecCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR------HRHLVSLIGYCDERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~g~~~~~~~~ 573 (845)
.++|.+.-..|+|-|++|..|... .|+.||||++... +.-.+.=+.|+++|++|. -.|+++|+-.|...+++
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 478888888999999999999865 5789999998754 333345578999999995 35889999999999999
Q ss_pred EEEEEeccCCCccccccCC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccccC
Q 003139 574 ILVYEYMANGPLRSHLYGT-DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGLSK 651 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGla~ 651 (845)
|||+|-+ ..+|++.|..- ..-.|..+.+..++.|+.-||..|.. .+|+|.||||.|||+++. ..+||||||.|.
T Consensus 510 ClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEeccCcceeeeccCcccc
Confidence 9999987 56888888643 23458889999999999999999998 899999999999999864 578999999997
Q ss_pred CCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHH-----HHHhhc
Q 003139 652 TGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWA-----MTWQKK 726 (845)
Q Consensus 652 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~-----~~~~~~ 726 (845)
.... .. .+...-+..|.|||.+.+-+|+...|+||.||.||||.||+..|.+........+..-+ .+++.+
T Consensus 586 ~~~e---ne-itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK 661 (752)
T KOG0670|consen 586 FASE---NE-ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK 661 (752)
T ss_pred cccc---cc-ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence 6332 22 22333456799999999999999999999999999999999888765433322111111 011111
Q ss_pred Cc-hhhhhcc--------------------------------ccCC--CCC---HHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 727 GM-LDQIMDS--------------------------------NLVG--KVN---PASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 727 ~~-~~~~~d~--------------------------------~l~~--~~~---~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
+. ..+-+|. .|.+ .++ +.....|.+|+..|+..||++|.|..
T Consensus 662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n 741 (752)
T KOG0670|consen 662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN 741 (752)
T ss_pred cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence 10 1111111 1111 122 33556788899999999999999999
Q ss_pred HHHHH
Q 003139 769 DVLWN 773 (845)
Q Consensus 769 ~vl~~ 773 (845)
+.|++
T Consensus 742 qAL~H 746 (752)
T KOG0670|consen 742 QALKH 746 (752)
T ss_pred HHhcC
Confidence 88764
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.2e-25 Score=275.28 Aligned_cols=197 Identities=18% Similarity=0.205 Sum_probs=139.7
Q ss_pred hCCC-CCcceEEEEE-------ecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCcee
Q 003139 554 KLRH-RHLVSLIGYC-------DERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSII 625 (845)
Q Consensus 554 ~l~H-~niv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 625 (845)
.++| +||++++++| .+...+++++||+ +++|.++|... ...+++.+++.++.||++||+|||+ ++|+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHS---QGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHh---CCee
Confidence 4556 6888888887 2334678889988 66999999643 3469999999999999999999998 9999
Q ss_pred eccCCCCcEEECCC-------------------CceEEEeccccCCCCCCCC--------------cccccccccCCCcC
Q 003139 626 HRDVKTTNILLDDN-------------------FVAKVADFGLSKTGPALDQ--------------THVSTAVKGSFGYL 672 (845)
Q Consensus 626 HrDik~~NILl~~~-------------------~~~kl~DFGla~~~~~~~~--------------~~~~~~~~gt~~y~ 672 (845)
||||||+||||+.. +.+||+|||+++....... ........||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 99999999999654 4556666666653211000 00011235788999
Q ss_pred ChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHH
Q 003139 673 DPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGET 752 (845)
Q Consensus 673 aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l 752 (845)
|||++.+..++.++|||||||+||||++|.+|+.... . ...... ...+.+.. .........+
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~----~~~~~~-----~~~~~~~~-----~~~~~~~~~~ 244 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----R----TMSSLR-----HRVLPPQI-----LLNWPKEASF 244 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----H----HHHHHH-----HhhcChhh-----hhcCHHHHHH
Confidence 9999999999999999999999999999987753211 0 000000 00111111 1112345678
Q ss_pred HHHhhhhCCCCCCCHHHHHHH
Q 003139 753 AEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 753 ~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+.+||+.+|.+||+|.|++++
T Consensus 245 ~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHhCCCChhhCcChHHHhhc
Confidence 889999999999999999753
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=6.1e-25 Score=231.74 Aligned_cols=266 Identities=23% Similarity=0.310 Sum_probs=196.2
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEc----CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLD----DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERS 571 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~ 571 (845)
+....+.|...++||+|.|+.||++++. ....||+|.+...+.. ....+|+++|..+. +.||+++.+++..++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3444567888999999999999999854 3567999998776544 46889999999994 999999999999999
Q ss_pred cEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC-CCCceEEEecccc
Q 003139 572 EMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD-DNFVAKVADFGLS 650 (845)
Q Consensus 572 ~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~-~~~~~kl~DFGla 650 (845)
..++|+||++.....+++. .++..++...++.+..||.++|. .|||||||||+|+|.+ .-+.-.|.|||||
T Consensus 109 ~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhH
Confidence 9999999999988888773 46788999999999999999999 9999999999999998 4567899999999
Q ss_pred CCC-----------------CC-CC------------------------CcccccccccCCCcCChhhhcc-CCCCchhH
Q 003139 651 KTG-----------------PA-LD------------------------QTHVSTAVKGSFGYLDPEYFRR-QQLTEKSD 687 (845)
Q Consensus 651 ~~~-----------------~~-~~------------------------~~~~~~~~~gt~~y~aPE~~~~-~~~s~ksD 687 (845)
... .. .. .........||+||+|||++.. ...+.++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 610 00 00 0000113458999999998865 56799999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH-----------Hhhc------Cc---hhhhh---ccc--------
Q 003139 688 VYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT-----------WQKK------GM---LDQIM---DSN-------- 736 (845)
Q Consensus 688 V~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~-----------~~~~------~~---~~~~~---d~~-------- 736 (845)
|||.|||++-+++++.||...... ...+.+.+.- ..+. .. +.+.. +..
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd-~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDD-ADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred eeeccceeehhhccccccccCccc-cchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 999999999999999998643322 1122222110 0000 00 00000 000
Q ss_pred ----cCCCC-CHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 737 ----LVGKV-NPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 737 ----l~~~~-~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
..... ....+..+.+++.+|+..||.+|-|++|.+++
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00001 11123468899999999999999999998865
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=3.6e-24 Score=213.38 Aligned_cols=168 Identities=21% Similarity=0.200 Sum_probs=125.9
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|+|.+++... ...++|.+++.|+.|+++||+|||+ .+ ||+|||+++++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc------
Confidence 6888888643 3469999999999999999999998 44 999999999999999 9998764321
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
...||+.|||||++.+..++.++|||||||++|||++|+.||........ .+..+....... ++. .....
T Consensus 63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~-------~~~-~~~~~ 132 (176)
T smart00750 63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNGMPAD-------DPR-DRSNL 132 (176)
T ss_pred -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHHhccC-------Ccc-ccccH
Confidence 12588999999999999999999999999999999999999864322111 111111111000 000 00111
Q ss_pred HHHHH--HHHHHHHHhhhhCCCCCCCHHHHHHHHHHhh
Q 003139 743 PASLK--KFGETAEKCLAEHGVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 743 ~~~~~--~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~ 778 (845)
..... .+.+++.+||+.+|.+||++.++++++....
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 22233 6899999999999999999999999987653
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.6e-25 Score=216.51 Aligned_cols=245 Identities=20% Similarity=0.343 Sum_probs=195.3
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCcc
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
+|.+...|+.|+|+++ |..+++|++... ....-++|..|.-.|+.+.||||+.++|.|.....+.++..|||.|+|.
T Consensus 197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY 275 (448)
T ss_pred hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence 6888999999999998 556667765433 2333468999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccc
Q 003139 587 SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVK 666 (845)
Q Consensus 587 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 666 (845)
..|++......+-.+..+++.++|+|++|||+-. +-|.---|.+..|+||++..++|+- +-.++ ........
T Consensus 276 nvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kf------sfqe~gr~ 347 (448)
T KOG0195|consen 276 NVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKF------SFQEVGRA 347 (448)
T ss_pred HHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-cccee------eeeccccc
Confidence 9999877667788899999999999999999832 3344447999999999999998852 11111 00111223
Q ss_pred cCCCcCChhhhccCCCC---chhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCH
Q 003139 667 GSFGYLDPEYFRRQQLT---EKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNP 743 (845)
Q Consensus 667 gt~~y~aPE~~~~~~~s---~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~ 743 (845)
-.+.||+||.+..++-+ .++|+|||.++||||.|...||....+-+. -.++.-..+...+++
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec---------------gmkialeglrv~ipp 412 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC---------------GMKIALEGLRVHIPP 412 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh---------------hhhhhhccccccCCC
Confidence 46789999999876643 579999999999999999999977655442 112233445567888
Q ss_pred HHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 744 ASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 744 ~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
.....+.+++.-|+..||.+||.+..|+-.||+.
T Consensus 413 gis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 413 GISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 8899999999999999999999999999999875
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.3e-22 Score=221.79 Aligned_cols=165 Identities=22% Similarity=0.187 Sum_probs=128.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc--CCcEEEEEEcCCC-----ChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD--DGTKVAVKRGNPR-----SEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
-++|...+.||+|+||.||+|.++ +++.+|||+.... .....+.|.+|+++|++++|+|+++.+.. .+..
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~ 93 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKD 93 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCc
Confidence 467888999999999999999875 5777899986533 22345678999999999999999964432 2468
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccC-CCCcEEECCCCceEEEeccccCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDV-KTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDi-k~~NILl~~~~~~kl~DFGla~~ 652 (845)
++||||+++++|... . . .. ...++.|++++|.|||+ ++|+|||| ||+|||++.++.+||+|||+|+.
T Consensus 94 ~LVmE~~~G~~L~~~-~-~----~~---~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 94 GLVRGWTEGVPLHLA-R-P----HG---DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred EEEEEccCCCCHHHh-C-c----cc---hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 999999999999632 1 1 11 14678899999999999 99999999 99999999999999999999986
Q ss_pred CCCCCCcc------cccccccCCCcCChhhhccC
Q 003139 653 GPALDQTH------VSTAVKGSFGYLDPEYFRRQ 680 (845)
Q Consensus 653 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~ 680 (845)
........ ..+...+++.|+|||.+...
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 44322111 11456788999999998643
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-21 Score=213.78 Aligned_cols=263 Identities=19% Similarity=0.229 Sum_probs=196.2
Q ss_pred CCCcceeeeeeceEEEEEEEEcCC--cEEEEEEcCCCChHhHHHHHHHHHHHHhCCC----CCcceEEEEE-ecCCcEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDG--TKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH----RHLVSLIGYC-DERSEMIL 575 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g--~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~g~~-~~~~~~~l 575 (845)
+|.+.+.||+|+||.||++..... ..+|+|............+..|..++..+.+ +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 788999999999999999997643 4688886554432222267788998988873 5888999888 57778999
Q ss_pred EEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-----CceEEEecccc
Q 003139 576 VYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-----FVAKVADFGLS 650 (845)
Q Consensus 576 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-----~~~kl~DFGla 650 (845)
||+.+ |.+|.++........++..+.++|+.|++.+|++||+ .+++||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 8899997755445689999999999999999999999 999999999999999854 46999999999
Q ss_pred C--CCCCCCC-----ccc-ccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHH
Q 003139 651 K--TGPALDQ-----THV-STAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMT 722 (845)
Q Consensus 651 ~--~~~~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~ 722 (845)
+ ....... ... .....||..|++++...+...+.+.|+||++.++.|++.|..||.......... .
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~--~---- 248 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS--K---- 248 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH--H----
Confidence 8 3211111 111 234569999999999999999999999999999999999999986544322110 0
Q ss_pred HhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhhhh
Q 003139 723 WQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 781 (845)
Q Consensus 723 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~~~ 781 (845)
..+......... .....+..+.++...+-..+..++|....+...|+....-.
T Consensus 249 -~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 249 -FEKDPRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred -HHHHhhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000011111111 11223345556666666689999999999999988765533
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=4.9e-20 Score=200.12 Aligned_cols=261 Identities=30% Similarity=0.392 Sum_probs=196.0
Q ss_pred CCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChH---hHHHHHHHHHHHHhCCCC-CcceEEEEEecCCcEEEEEEe
Q 003139 504 FDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQ---GIAEFRTEIEMLSKLRHR-HLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-niv~l~g~~~~~~~~~lV~Ey 579 (845)
|...+.||.|+||.||++... ..+++|.+...... ....|.+|+.++..+.|+ +++++.+.+......++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 556778999999999999887 77888987654322 467899999999999988 799999999777778999999
Q ss_pred ccCCCccccccCCCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC-ceEEEeccccCCCCCCC
Q 003139 580 MANGPLRSHLYGTDL-PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF-VAKVADFGLSKTGPALD 657 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~-~~kl~DFGla~~~~~~~ 657 (845)
+.+++|.+++..... ..+.......++.|++.+++|+|+ .+++||||||+||+++... .++++|||+++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999966643321 268889999999999999999999 8899999999999999988 79999999997533322
Q ss_pred Ccc----cccccccCCCcCChhhhcc---CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 658 QTH----VSTAVKGSFGYLDPEYFRR---QQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 658 ~~~----~~~~~~gt~~y~aPE~~~~---~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
... ......|+..|+|||.+.+ ...+...|+||+|++++++++|..|+...... ................
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP 233 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc
Confidence 211 3456789999999999987 68899999999999999999999996543321 0001111111111100
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
.................+.+++..|+..+|..|.++.+....
T Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223578899999999999999999887765
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=6.6e-21 Score=186.53 Aligned_cols=258 Identities=18% Similarity=0.233 Sum_probs=198.7
Q ss_pred hcCCCcceeeeeeceEEEEEEE-EcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCC-CCcceEEEEEecCCcEEEEEE
Q 003139 501 TNKFDESLLLGVGGFGRVYKGT-LDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH-RHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~E 578 (845)
.++|...+.||+|+||.+|.|. ..+|+.||||.-.... ...++.-|.++...|+| ..|..+..|..++..-.+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 3678999999999999999998 4589999999855432 22456789999999976 467777777888889999999
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC---CCceEEEeccccCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD---NFVAKVADFGLSKTGPA 655 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~---~~~~kl~DFGla~~~~~ 655 (845)
.+ |.||.+++.-.+ ..++.++++-++-|++.-++|+|. +++|||||||+|.|..- ...+.++|||||+...+
T Consensus 92 LL-GPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 98 789988774332 468999999999999999999999 99999999999999973 35789999999986443
Q ss_pred CCC-----cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 656 LDQ-----THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 656 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
... ........||..|.+-....+...+.+.|+=|+|.+|..+..|..||.+..+...... .+
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK------------yE 234 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK------------YE 234 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH------------HH
Confidence 222 1223467899999999988888889999999999999999999999987765432211 11
Q ss_pred hhhccccC---CCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 731 QIMDSNLV---GKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 731 ~~~d~~l~---~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
++.+..+. ...-...+.++.-.+.-|-...-++-|...-+.+...-+
T Consensus 235 kI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 235 KISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred HHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 22221111 111233466777888889888889999887766655443
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=1.7e-20 Score=191.58 Aligned_cols=261 Identities=17% Similarity=0.208 Sum_probs=196.9
Q ss_pred CCCcceeeeeeceEEEEEEEE-cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEec
Q 003139 503 KFDESLLLGVGGFGRVYKGTL-DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.|.+.++||+|.||.++.|+. -+++.||||.-...++. -++..|.+..+.|. .++|...+-+-.++.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 588889999999999999983 47899999975444432 45667888888884 689999988888888999999998
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-----CCceEEEeccccCCCCC
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-----NFVAKVADFGLSKTGPA 655 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-----~~~~kl~DFGla~~~~~ 655 (845)
|-||+++..-. ...++.++++.||.|++.-++|+|+ +.+|.|||||+|+||.. ...+.|+|||+|+...+
T Consensus 107 -GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 107 -GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred -CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 78998876433 3479999999999999999999999 99999999999999963 34789999999987554
Q ss_pred CCCc-----ccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 656 LDQT-----HVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 656 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
.... .......||.+||+-....++..+.+.|+=|+|-+++..|.|..||.+........--+-+....+.-.+.
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~ 261 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIE 261 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHH
Confidence 3322 22456789999999999999999999999999999999999999998765543211101000001111122
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
+++ ...+.++..-+.-.-..+-++-|..+-+...+..++.
T Consensus 262 ~Lc---------~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 262 VLC---------EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHH---------hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 222 2344555565555566777788888777766666543
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2.2e-21 Score=225.95 Aligned_cols=255 Identities=21% Similarity=0.225 Sum_probs=187.0
Q ss_pred cceeeeeeceEEEEEEEEc-CCcEEEEEEcC-----CCChH-hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEE
Q 003139 506 ESLLLGVGGFGRVYKGTLD-DGTKVAVKRGN-----PRSEQ-GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~-----~~~~~-~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~E 578 (845)
...++|.|++|.|+..... .....+.|... ..+.. ....+..|+.+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3458999999977776643 33334444321 11221 22236678888888999999888877777666666699
Q ss_pred eccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 579 YMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 579 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
|+++ +|..++... ..++-.++..+..|+..|++|||+ .+|.|||||++|+++..++.+||+|||.+........
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 999888543 468888999999999999999999 9999999999999999999999999999875433333
Q ss_pred c--ccccccccCCCcCChhhhccCCCCc-hhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhcc
Q 003139 659 T--HVSTAVKGSFGYLDPEYFRRQQLTE-KSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDS 735 (845)
Q Consensus 659 ~--~~~~~~~gt~~y~aPE~~~~~~~s~-ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~ 735 (845)
. ......+|+..|+|||++.+.+|.+ ..||||.|+++..|++|+.||......++.. ..... ..+.-..
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----~~~~~---~~~~~~~ 547 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----KTNNY---SDQRNIF 547 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----hhhcc---ccccccc
Confidence 3 5567889999999999999999976 5899999999999999999986543332210 00000 0000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHH
Q 003139 736 NLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 736 ~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L 774 (845)
.-...+....+.+...++.++|+.+|.+|-|+.+|++.=
T Consensus 548 ~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~ 586 (601)
T KOG0590|consen 548 EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDE 586 (601)
T ss_pred cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhCh
Confidence 000112244567788899999999999999999998653
No 415
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=3.3e-20 Score=206.20 Aligned_cols=218 Identities=24% Similarity=0.340 Sum_probs=164.5
Q ss_pred HHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCC
Q 003139 552 LSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKT 631 (845)
Q Consensus 552 l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~ 631 (845)
|+.+.|.|+.+++|.|.++...+.|.+||..|+|.+.+... ...++|.-...+++++++||+|||. ++-..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeecc
Confidence 45789999999999999999999999999999999999763 4579999999999999999999998 23339999999
Q ss_pred CcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccC-------CCCchhHHHHHHHHHHHHHcCCCC
Q 003139 632 TNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQ-------QLTEKSDVYSFGVVLMEVLCTRPA 704 (845)
Q Consensus 632 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~s~ksDV~S~Gvvl~Elltg~~p 704 (845)
+|+++|..+.+||+|||+.................-..-|.|||.++.. ..+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999998775431112222223344579999998763 257789999999999999999999
Q ss_pred CCCCCCccc-ccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHhhh
Q 003139 705 LNPVLPREQ-VNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQ 779 (845)
Q Consensus 705 ~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~~~ 779 (845)
|+.....+. ..++.++.. .-.....|.+... .+....+..++.+||..+|++||++++|...++....
T Consensus 158 ~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccccCChHHHHHHHHh-----cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 976433322 223332222 0011111111100 1334478899999999999999999999887776544
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=9.8e-20 Score=183.31 Aligned_cols=137 Identities=18% Similarity=0.164 Sum_probs=107.2
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCChH--h-------HHH-----------------HHHHHHHHHhCCCCCcc
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQ--G-------IAE-----------------FRTEIEMLSKLRHRHLV 561 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~niv 561 (845)
..||+|+||.||+|...+|+.||||.+...... . ... ...|++.+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 479999999999999888999999987543210 0 112 23499999999888764
Q ss_pred eEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeccCCCCcEEECCCC
Q 003139 562 SLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYL-HTGAAQSIIHRDVKTTNILLDDNF 640 (845)
Q Consensus 562 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDik~~NILl~~~~ 640 (845)
....+.. ...+|||||+++++|...+.. ...+++.+.++++.|++.+|.|| |+ .+|+||||||+|||++ ++
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEE-CC
Confidence 4333322 234899999998877654322 24688999999999999999999 66 8999999999999998 47
Q ss_pred ceEEEeccccCC
Q 003139 641 VAKVADFGLSKT 652 (845)
Q Consensus 641 ~~kl~DFGla~~ 652 (845)
.++|+|||+|..
T Consensus 155 ~v~LiDFG~a~~ 166 (190)
T cd05147 155 KLYIIDVSQSVE 166 (190)
T ss_pred cEEEEEcccccc
Confidence 899999999975
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=6.5e-20 Score=186.75 Aligned_cols=170 Identities=15% Similarity=0.147 Sum_probs=133.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC---hHhHHH------HHHHHHHHHhCCCCCcceEEEEEecC-
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS---EQGIAE------FRTEIEMLSKLRHRHLVSLIGYCDER- 570 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~---~~~~~~------~~~E~~~l~~l~H~niv~l~g~~~~~- 570 (845)
.++|...++||.|+||.||+... ++..+|+|.+.+.. +..... +.+|++.+.+++|++|..+..++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 58999999999999999999765 57789999886542 222233 57899999999999999998885432
Q ss_pred -------CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceE
Q 003139 571 -------SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAK 643 (845)
Q Consensus 571 -------~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~k 643 (845)
+..+|||||++|.+|.++. .++. ....+++.+|..||+ .+++||||||+||++++++ ++
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP------EISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh------hccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCCC-EE
Confidence 3589999999999998763 1222 346699999999999 9999999999999999988 99
Q ss_pred EEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHH
Q 003139 644 VADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVL 699 (845)
Q Consensus 644 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ell 699 (845)
|+|||..+.... .... ..+...+.+..++|+|+||+.+.-+.
T Consensus 175 liDfg~~~~~~e--~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 175 IIDLSGKRCTAQ--RKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEECCCcccccc--hhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 999998865321 1100 11445556778999999999988763
No 418
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.9e-20 Score=216.24 Aligned_cols=249 Identities=20% Similarity=0.217 Sum_probs=180.0
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC-hHhHHHHHHHHHH--HHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS-EQGIAEFRTEIEM--LSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
++...+.||++.|=+|.+|++++|. |+||.+-+.. .-.++.|.++++- ...++|||.+++.-+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5666778999999999999999887 8888765443 3345555554443 4556899999998887777778899899
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC-CC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL-DQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~-~~ 658 (845)
.. -+|.+.|. .++-|...+...|+.|++.||..+|. .+|+|||||.+||||++-.-+.|+||.--+...-. +.
T Consensus 103 vk-hnLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 103 VK-HNLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred Hh-hhhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 85 47888883 34567888899999999999999999 99999999999999999999999999877643221 11
Q ss_pred ccccc----ccccCCCcCChhhhcc----------CC-CCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHH
Q 003139 659 THVST----AVKGSFGYLDPEYFRR----------QQ-LTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMT 722 (845)
Q Consensus 659 ~~~~~----~~~gt~~y~aPE~~~~----------~~-~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~ 722 (845)
....+ .-..-.+|.|||.+-. .. .+++.||||+||++.||++ |+++|+. .+....
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---------SQL~aY 247 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---------SQLLAY 247 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---------HHHHhH
Confidence 11111 1222347999998743 12 6789999999999999987 5777642 111111
Q ss_pred Hhh-cCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHH
Q 003139 723 WQK-KGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLE 775 (845)
Q Consensus 723 ~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~ 775 (845)
... ....+..+.. + +...++++++.|++.||.+|.++++.++.-.
T Consensus 248 r~~~~~~~e~~Le~-----I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 248 RSGNADDPEQLLEK-----I---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred hccCccCHHHHHHh-----C---cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 111 1111111111 1 1125778999999999999999999998844
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.6e-18 Score=171.19 Aligned_cols=186 Identities=18% Similarity=0.113 Sum_probs=140.4
Q ss_pred CcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh----HhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEe
Q 003139 505 DESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE----QGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
.+...|++|+||+||.+.- .+.+++.+.+..... .....|.+|+++|++++ |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3456899999999997765 577888777654432 11235789999999995 5889999987 457999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccC-CCCcEEECCCCceEEEeccccCCCCCCCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDV-KTTNILLDDNFVAKVADFGLSKTGPALDQ 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDi-k~~NILl~~~~~~kl~DFGla~~~~~~~~ 658 (845)
++|.+|...+.. ....++.|++++|+++|+ .+|+|||| ||+|||+++++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999888654311 124578899999999999 99999999 79999999999999999999985432211
Q ss_pred c----c------c-ccccccCCCcCChhhhccC-CCC-chhHHHHHHHHHHHHHcCCCCCCC
Q 003139 659 T----H------V-STAVKGSFGYLDPEYFRRQ-QLT-EKSDVYSFGVVLMEVLCTRPALNP 707 (845)
Q Consensus 659 ~----~------~-~~~~~gt~~y~aPE~~~~~-~~s-~ksDV~S~Gvvl~Elltg~~p~~~ 707 (845)
- . . ......++.|++|+..+-- ..+ ...+.++-|.-+|.++|++.+...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 0 1122368889999865432 333 678999999999999999987654
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=2e-18 Score=174.35 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=110.7
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChH--------------------------hHHHHHHHHHHHHhCCCCCc
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQ--------------------------GIAEFRTEIEMLSKLRHRHL 560 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~ni 560 (845)
...||+|++|.||+|...+|+.||||........ ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999878999999987654210 01224578999999999988
Q ss_pred ceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC
Q 003139 561 VSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF 640 (845)
Q Consensus 561 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~ 640 (845)
.....+... ..+|||||++++++...... ...++..+..+++.|++.+|.+||+ ..+|+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CC
Confidence 555444333 24899999998865443211 2357788999999999999999996 36999999999999999 78
Q ss_pred ceEEEeccccCCCC
Q 003139 641 VAKVADFGLSKTGP 654 (845)
Q Consensus 641 ~~kl~DFGla~~~~ 654 (845)
.++|+|||+++...
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999998643
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=4.4e-18 Score=178.49 Aligned_cols=231 Identities=19% Similarity=0.271 Sum_probs=149.6
Q ss_pred CCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCC---CChHhHHHHHHHHHHHHhCCC----------CCcceEEEEEe-
Q 003139 504 FDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNP---RSEQGIAEFRTEIEMLSKLRH----------RHLVSLIGYCD- 568 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H----------~niv~l~g~~~- 568 (845)
+.....||.|+++.||.+++. +|+.+|+|.... ......+++.+|.-....+.+ -.++..++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 344568999999999999987 589999996432 233456777777766666433 12222222221
Q ss_pred --------cC---C-----cEEEEEEeccCCCccccccC---C--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeec
Q 003139 569 --------ER---S-----EMILVYEYMANGPLRSHLYG---T--DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHR 627 (845)
Q Consensus 569 --------~~---~-----~~~lV~Ey~~~gsL~~~l~~---~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 627 (845)
.. . ..+++|+-+ .++|.+++.. . ....+....++.+..|+++.+++||+ .+++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEec
Confidence 11 1 236778877 5678776531 1 11234456677888999999999999 999999
Q ss_pred cCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhcc--------CCCCchhHHHHHHHHHHHHH
Q 003139 628 DVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRR--------QQLTEKSDVYSFGVVLMEVL 699 (845)
Q Consensus 628 Dik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~ksDV~S~Gvvl~Ell 699 (845)
||||+|++++++|.++|+||+....... . ... ...+..|.+||.... -.++.+.|.|++|+++|.|.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~---~-~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGT---R-YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTE---E-EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCc---e-eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999998765221 1 111 344578999997643 25789999999999999999
Q ss_pred cCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCC
Q 003139 700 CTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDR 764 (845)
Q Consensus 700 tg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~R 764 (845)
||+.||+...+..... | ...... +.++.+..|+..+|+.+|++|
T Consensus 245 C~~lPf~~~~~~~~~~---~-----------------~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPE---W-----------------DFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSG---G-----------------GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCcccccc---c-----------------cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999997653322110 0 112334 778889999999999999988
No 422
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=6.6e-19 Score=195.33 Aligned_cols=224 Identities=22% Similarity=0.272 Sum_probs=177.3
Q ss_pred eeeeceEEEEEEE----EcCCcEEEEEEcCCCChH--hHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEeccC
Q 003139 510 LGVGGFGRVYKGT----LDDGTKVAVKRGNPRSEQ--GIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 510 LG~G~fg~Vy~~~----~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
+|+|.||.|+++. .+.|..+|.|........ .......|..++...+ ||.+|++...+..+...+++.+|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 6899999999764 334667787765543211 1114556888888887 99999999999999999999999999
Q ss_pred CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccc
Q 003139 583 GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVS 662 (845)
Q Consensus 583 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 662 (845)
|.|...+.+. ..++..........++-+++++|+ .+|+|||+|++||+++.+|++++.|||+++..-...
T Consensus 82 g~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 82 GDLFTRLSKE--VMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred chhhhccccC--CchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 9998888543 456777777888899999999998 999999999999999999999999999998633211
Q ss_pred cccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCC
Q 003139 663 TAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVN 742 (845)
Q Consensus 663 ~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~ 742 (845)
..+||..|||||++. ....++|.||||++++||++|-.||.. + .+..|+...+ ..+
T Consensus 152 -~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~---------------~~~~Il~~~~--~~p 207 (612)
T KOG0603|consen 152 -IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----D---------------TMKRILKAEL--EMP 207 (612)
T ss_pred -hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----H---------------HHHHHhhhcc--CCc
Confidence 118999999999998 667899999999999999999999864 1 1222222111 245
Q ss_pred HHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 743 PASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 743 ~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
.........++..++..+|..|...
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 6667778888899999999999765
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=1.2e-17 Score=197.81 Aligned_cols=199 Identities=23% Similarity=0.225 Sum_probs=159.4
Q ss_pred HHHHhcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCcE
Q 003139 497 ILDATNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR---HRHLVSLIGYCDERSEM 573 (845)
Q Consensus 497 l~~at~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~ 573 (845)
+......|.+.+.||+|+||.||+|...+|+.||+|.-++.+. -+|.--.+++.+|+ -+-|..+...+.-.+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3344567888899999999999999988899999998766542 12333344455555 12333333444556778
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC-------CCCceEEEe
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD-------DNFVAKVAD 646 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~-------~~~~~kl~D 646 (845)
+||+||.+.|+|.+++. ..+.++|.-++.++.|+++-+++||. .+|||+||||+|.||. ++..++|+|
T Consensus 770 ~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred eeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEEe
Confidence 99999999999999996 44579999999999999999999999 9999999999999994 345789999
Q ss_pred ccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCC
Q 003139 647 FGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRP 703 (845)
Q Consensus 647 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~ 703 (845)
||.+..+....+........+|-.+--+|...+++++...|.|.++-+++-||.|+.
T Consensus 845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999865444334445567788999999999999999999999999999999999983
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.4e-17 Score=167.60 Aligned_cols=135 Identities=19% Similarity=0.226 Sum_probs=106.4
Q ss_pred CcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-----CCCCcceEEEEEecCC---c-EE
Q 003139 505 DESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-----RHRHLVSLIGYCDERS---E-MI 574 (845)
Q Consensus 505 ~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~g~~~~~~---~-~~ 574 (845)
...++||+|+||.||. +. ++.. +||+.........+++.+|+++++++ .||||++++|++.+.. . ..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4456899999999996 43 4444 79987665444567899999999999 5799999999997763 3 33
Q ss_pred EEEEe--ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHH-HHHhhcCCCceeeccCCCCcEEECC----CCceEEEec
Q 003139 575 LVYEY--MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGL-HYLHTGAAQSIIHRDVKTTNILLDD----NFVAKVADF 647 (845)
Q Consensus 575 lV~Ey--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDik~~NILl~~----~~~~kl~DF 647 (845)
+|+|| +++|+|.+++.+. .+++. ..++.|++.++ +|||+ ++|+||||||+|||++. +..++|+||
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 78999 6689999999542 35544 35678888888 99999 99999999999999974 348999995
Q ss_pred ccc
Q 003139 648 GLS 650 (845)
Q Consensus 648 Gla 650 (845)
+.+
T Consensus 154 ~G~ 156 (210)
T PRK10345 154 IGE 156 (210)
T ss_pred CCC
Confidence 544
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=1.1e-16 Score=164.40 Aligned_cols=134 Identities=26% Similarity=0.397 Sum_probs=114.0
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh--------HhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE--------QGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
+.||+|++|.||+|.. .|..+++|+...... .....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4799999999999987 577899997553321 1124678899999999999998888888777889999999
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+++++|.+++... .+ ++..++.+++.+|.+||+ .+++|||++|.|||++ ++.++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999988432 22 888999999999999999 9999999999999999 78999999999865
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=2e-16 Score=164.71 Aligned_cols=140 Identities=17% Similarity=0.149 Sum_probs=110.2
Q ss_pred CCCcceeeeeeceEEEEEEE--EcCCcEEEEEEcCCCChH------------------------hHHHHHHHHHHHHhCC
Q 003139 503 KFDESLLLGVGGFGRVYKGT--LDDGTKVAVKRGNPRSEQ------------------------GIAEFRTEIEMLSKLR 556 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~--~~~g~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 556 (845)
-|.+.+.||+|+||.||+|. ..+|+.||+|........ ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777899999999999998 458999999986543210 1123568999999997
Q ss_pred CCC--cceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc-eeeccCCCCc
Q 003139 557 HRH--LVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQS-IIHRDVKTTN 633 (845)
Q Consensus 557 H~n--iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDik~~N 633 (845)
+.+ +.+++++ ...++||||+++++|...+... ..+...+...++.|++.+|++||+ .+ |+||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhh
Confidence 633 4445543 2358999999998887765322 345666778999999999999999 88 9999999999
Q ss_pred EEECCCCceEEEeccccCC
Q 003139 634 ILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 634 ILl~~~~~~kl~DFGla~~ 652 (845)
|+++ ++.++|+|||.+..
T Consensus 180 Ili~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred EEEE-CCCEEEEEChhhhc
Confidence 9999 88999999999875
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.5e-16 Score=160.17 Aligned_cols=143 Identities=20% Similarity=0.171 Sum_probs=112.4
Q ss_pred HHHHHHhcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh----------------------HhHHHHHHHHHHH
Q 003139 495 QEILDATNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE----------------------QGIAEFRTEIEML 552 (845)
Q Consensus 495 ~el~~at~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~----------------------~~~~~~~~E~~~l 552 (845)
+++......|...+.||+|+||.||++...+|+.+|||+...... .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 444444445777889999999999999988899999997543220 0112366789999
Q ss_pred HhCCCC--CcceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCC
Q 003139 553 SKLRHR--HLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVK 630 (845)
Q Consensus 553 ~~l~H~--niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik 630 (845)
.++.|+ .+.+.++. ...++||||+++++|...... .....++.+++.++.++|+ .+|+|||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~ 152 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYK---HGIIHGDLS 152 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHH---CCCCcCCCC
Confidence 999887 44555543 355899999999998775421 3456789999999999999 999999999
Q ss_pred CCcEEECCCCceEEEeccccCC
Q 003139 631 TTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 631 ~~NILl~~~~~~kl~DFGla~~ 652 (845)
|+||++++++.++|+|||++..
T Consensus 153 p~Nill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred cccEEEcCCCcEEEEECCcccc
Confidence 9999999999999999999965
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.68 E-value=2.4e-16 Score=160.49 Aligned_cols=130 Identities=27% Similarity=0.394 Sum_probs=107.6
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCCC--------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPRS--------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
+||+|+||.||+|.+. |..+++|...... ....+++.+|++++..++|+++.....++......++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 4899999999999864 7889999754321 112356788999999999988766666666677789999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
++++|.+++.... ..++.+++++|.+||+ .+++|||++|+||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~---------~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN---------DELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH---------HHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998774321 1889999999999999 9999999999999999 78999999999876
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=2.2e-16 Score=184.83 Aligned_cols=136 Identities=23% Similarity=0.284 Sum_probs=112.0
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEE-cCCC-C------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKR-GNPR-S------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~-~~~~-~------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~ 573 (845)
..|...+.||+|+||.||+|.+.+.. +++|+ .... . ....+++.+|++++.+++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 34456778999999999999876443 44443 2111 1 12235688999999999999999988888887888
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
++||||+++++|.+++. ...+++.+++++|.|||+ .+++||||||+|||+ +++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 99999999999998873 467899999999999999 999999999999999 577999999999976
No 430
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=4.2e-16 Score=162.91 Aligned_cols=197 Identities=19% Similarity=0.192 Sum_probs=138.9
Q ss_pred CCCCcceEEEEEec---------------------------CCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHH
Q 003139 556 RHRHLVSLIGYCDE---------------------------RSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIG 608 (845)
Q Consensus 556 ~H~niv~l~g~~~~---------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 608 (845)
+|||||++.+++.+ ...+|+||...+ -+|+++|... ..+.....-|+.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~---~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR---HRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC---CCchHHHHHHHHH
Confidence 69999998876532 235789998774 4899888644 3566777789999
Q ss_pred HHHHHHHHhhcCCCceeeccCCCCcEEEC--CCC--ceEEEeccccCCCCCC--CCc--ccccccccCCCcCChhhhccC
Q 003139 609 AARGLHYLHTGAAQSIIHRDVKTTNILLD--DNF--VAKVADFGLSKTGPAL--DQT--HVSTAVKGSFGYLDPEYFRRQ 680 (845)
Q Consensus 609 ia~gL~yLH~~~~~~ivHrDik~~NILl~--~~~--~~kl~DFGla~~~~~~--~~~--~~~~~~~gt~~y~aPE~~~~~ 680 (845)
+++|+.|||. ++|.|||+|++||||. +|. ...|+|||++-..... .-. ...-...|...-||||+....
T Consensus 350 lLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 350 LLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 9999999999 9999999999999993 333 5789999998542221 111 112234577789999988643
Q ss_pred C------CCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHH
Q 003139 681 Q------LTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAE 754 (845)
Q Consensus 681 ~------~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~ 754 (845)
+ --.|+|.|+.|-+.||++..+.||...... ..+... +++ .-....+..++..+.+++.
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Yqe---------~qLPalp~~vpp~~rqlV~ 491 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----YQE---------SQLPALPSRVPPVARQLVF 491 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----hhh---------hhCCCCcccCChHHHHHHH
Confidence 2 235899999999999999999999752111 111111 111 1112344566777889999
Q ss_pred HhhhhCCCCCCCHHHHHHHH
Q 003139 755 KCLAEHGVDRPSMGDVLWNL 774 (845)
Q Consensus 755 ~cl~~~p~~RPs~~~vl~~L 774 (845)
..|+.||.+|++..-....|
T Consensus 492 ~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 492 DLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHhcCCccccCCccHHHhHH
Confidence 99999999999876544333
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=3.6e-17 Score=178.37 Aligned_cols=172 Identities=25% Similarity=0.341 Sum_probs=127.9
Q ss_pred CcEEEEEEeccCCCccccccCC-CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccc
Q 003139 571 SEMILVYEYMANGPLRSHLYGT-DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGL 649 (845)
Q Consensus 571 ~~~~lV~Ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGl 649 (845)
..+++.|++|...+|.++|... .....+|...+.++.|++.|++| ++.+|||+||.||+...+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence 3578999999999999999744 34567899999999999999999 5789999999999999999999999999
Q ss_pred cCCCCCCC----CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCCcccccHHHHHHHHh
Q 003139 650 SKTGPALD----QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC-TRPALNPVLPREQVNIAEWAMTWQ 724 (845)
Q Consensus 650 a~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~l~~~~~~~~ 724 (845)
........ .....+...||..||+||.+.+++|+.|+||||||+||+||+. =...++.
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----------------- 465 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----------------- 465 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----------------
Confidence 86544322 1223456789999999999999999999999999999999987 2221110
Q ss_pred hcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 725 KKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 725 ~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
.+.+.++-|..+...+..+.+ .=..++.+++.+.|.+||++
T Consensus 466 -~~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 466 -IATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred -HHhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCCcccCchH
Confidence 011111111111111111111 22478899999999999944
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.65 E-value=1.6e-16 Score=184.32 Aligned_cols=211 Identities=25% Similarity=0.317 Sum_probs=146.6
Q ss_pred hcCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEe
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEY 579 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey 579 (845)
...|+.+++|..|++|.||..+++ ..+.+|.|. ++.+- +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee------------------
Confidence 367889999999999999999887 456788843 32211 0100 22233344433
Q ss_pred ccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCC-
Q 003139 580 MANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQ- 658 (845)
Q Consensus 580 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~- 658 (845)
|+-...+... ++++... +.+++|||+ .+|+|||+||+|.||..-|++|++|||+++.......
T Consensus 136 ---gDc~tllk~~--g~lPvdm--------vla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNI--GPLPVDM--------VLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccC--CCCcchh--------hHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 4444444322 2333322 788999999 9999999999999999999999999999975322110
Q ss_pred ------------cccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 659 ------------THVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 659 ------------~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
.-....++||+.|.|||++..+.|...+|+|++|+|+||.+-|+.||.+..+++-.. ..+.
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg------~vis- 272 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG------QVIS- 272 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh------hhhh-
Confidence 112245689999999999999999999999999999999999999998775544211 0000
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCH
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSM 767 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~ 767 (845)
|.....+-....+.+..+++.+.|+.+|..|--.
T Consensus 273 -------d~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt 306 (1205)
T KOG0606|consen 273 -------DDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGT 306 (1205)
T ss_pred -------hhccccccCcCCCHHHHHHHHHHHHhChHhhccc
Confidence 0111111233445677889999999999999543
No 433
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.60 E-value=1.1e-14 Score=140.28 Aligned_cols=134 Identities=22% Similarity=0.229 Sum_probs=115.6
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCC--CCcceEEEEEecCCcEEEEEEeccCCC
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH--RHLVSLIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
.+.||+|.++.||++...+ ..+++|....... ..++..|+.++..++| .++.+++++....+..++++||++++.
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 4579999999999999864 7899998765543 4678899999999976 599999999988889999999999887
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 585 LRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 585 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+..+ ++.....++.+++++|++||.....+++|+||+|+||++++.+.+++.|||.++.
T Consensus 80 ~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 7654 5677788999999999999984445799999999999999999999999999875
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2.7e-14 Score=143.69 Aligned_cols=136 Identities=20% Similarity=0.211 Sum_probs=98.0
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh--HhHHHH----------------------HHHHHHHHhCCCCC--c
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE--QGIAEF----------------------RTEIEMLSKLRHRH--L 560 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~----------------------~~E~~~l~~l~H~n--i 560 (845)
.+.||+|+||.||+|...+|+.||||....... .....+ ..|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 357999999999999988899999997654321 111111 34666666664432 4
Q ss_pred ceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC
Q 003139 561 VSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF 640 (845)
Q Consensus 561 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~ 640 (845)
.+.++. ...++||||++++.+........ ... .+...++.+++.++.++|. .++|+||||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~--~~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV--RLL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh--hhc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CC
Confidence 444443 24689999999965432211111 011 5678899999999999996 37899999999999999 88
Q ss_pred ceEEEeccccCC
Q 003139 641 VAKVADFGLSKT 652 (845)
Q Consensus 641 ~~kl~DFGla~~ 652 (845)
.++|+|||.+..
T Consensus 152 ~~~liDfg~a~~ 163 (187)
T cd05119 152 KVYIIDVPQAVE 163 (187)
T ss_pred cEEEEECccccc
Confidence 999999999975
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=6.5e-14 Score=146.22 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=105.7
Q ss_pred ceeee-eeceEEEEEEEEcCCcEEEEEEcCCCC-------------hHhHHHHHHHHHHHHhCCCCCc--ceEEEEEecC
Q 003139 507 SLLLG-VGGFGRVYKGTLDDGTKVAVKRGNPRS-------------EQGIAEFRTEIEMLSKLRHRHL--VSLIGYCDER 570 (845)
Q Consensus 507 ~~~LG-~G~fg~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~ 570 (845)
...|| .||.|+||++... +..++||+..... ......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 34788 8999999999886 6788998764321 1223567889999999998875 6777775433
Q ss_pred Cc----EEEEEEeccC-CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEE
Q 003139 571 SE----MILVYEYMAN-GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVA 645 (845)
Q Consensus 571 ~~----~~lV~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~ 645 (845)
.. .++|+|++++ .+|.+++... +++.. .+.+++.+|.+||+ .+|+||||||.|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCCEEEE
Confidence 22 3599999997 6888887432 34443 36789999999999 999999999999999998999999
Q ss_pred eccccCC
Q 003139 646 DFGLSKT 652 (845)
Q Consensus 646 DFGla~~ 652 (845)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9999876
No 436
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=4e-15 Score=173.72 Aligned_cols=256 Identities=23% Similarity=0.279 Sum_probs=188.8
Q ss_pred CCCcceeeeeeceEEEEEEEEcC--CcEEEEEEcCCCC--hHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEE
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDD--GTKVAVKRGNPRS--EQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~--g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~ 577 (845)
.|...+.||+|.|+.|-...... ...+++|.+.... ....+....|..+-..+. |+|++.+++...+.+..++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 34555569999999998876532 3456777655443 333445556888777886 999999999999999999999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHh-hcCCCceeeccCCCCcEEECCCC-ceEEEeccccCCCCC
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLH-TGAAQSIIHRDVKTTNILLDDNF-VAKVADFGLSKTGPA 655 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDik~~NILl~~~~-~~kl~DFGla~~~~~ 655 (845)
||..++++...+........+....-....|+..++.|+| . .++.||||||+|.+++..+ ..+++|||+|.....
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999998884333324555667789999999999999 6 8999999999999999999 999999999976554
Q ss_pred -CCCccccccccc-CCCcCChhhhccC-CCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhh
Q 003139 656 -LDQTHVSTAVKG-SFGYLDPEYFRRQ-QLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQI 732 (845)
Q Consensus 656 -~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 732 (845)
..........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++......+ ....|.... +
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-~~~~~~~~~---~----- 248 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-RYSSWKSNK---G----- 248 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-cceeecccc---c-----
Confidence 333444455677 9999999998874 557789999999999999999999875443331 111221111 0
Q ss_pred hccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 733 MDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 733 ~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
................+..+++..+|..|.+.+++...
T Consensus 249 ---~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 249 ---RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ---ccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 00011122334455677888888999999999887543
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.43 E-value=5.9e-13 Score=150.97 Aligned_cols=143 Identities=27% Similarity=0.307 Sum_probs=102.4
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHH---------------------------------------
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIA--------------------------------------- 543 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~--------------------------------------- 543 (845)
.|+. +.||+|++|.||+|++++|+.||||...+...+..+
T Consensus 119 ~fd~-~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFEE-KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCCC-cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 4443 579999999999999999999999987765322110
Q ss_pred -HHHHHHHHHHhCC----CCCcceEEEEE-ecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHH-HHHHH
Q 003139 544 -EFRTEIEMLSKLR----HRHLVSLIGYC-DERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAAR-GLHYL 616 (845)
Q Consensus 544 -~~~~E~~~l~~l~----H~niv~l~g~~-~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yL 616 (845)
+|.+|.+.+.+++ |.+-+.+-..+ ...+..+|||||++|++|.+.+..... .. .+.+++.++++ .+..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQV 273 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHH
Confidence 2445666555552 33223322222 334567999999999999887643211 12 34567777666 46788
Q ss_pred hhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 617 HTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 617 H~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
|. .+++|+|+||.||++++++.++++|||++...
T Consensus 274 ~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 274 LR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred Hh---CCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 88 89999999999999999999999999998764
No 438
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.32 E-value=3.7e-12 Score=125.88 Aligned_cols=144 Identities=19% Similarity=0.236 Sum_probs=91.2
Q ss_pred EEEecCCCcccccCCceeecCCCCcccccc--cC-------CcccccCCCCCCCcccceeEeecccceEEEeecccceEE
Q 003139 36 YLIACGSSQKVTFQARTYVPDTEHSSLSMK--SG-------NSTTASSNSSAPSPIYQSARIFSAAAFYKFEIEHKGRHW 106 (845)
Q Consensus 36 ~~i~CG~~~~~~~~~~~~v~D~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~t~R~F~~~~cY~~~~~~~g~~~ 106 (845)
+.||||++.+++..|++|.+|..|.....+ .+ ............+++|+|.|+=.....|.+|+.++|.|.
T Consensus 3 ~~IN~Gg~~~~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~~f~Y~ip~~~~G~Y~ 82 (174)
T PF11721_consen 3 LRINAGGPAYTDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPSSFSYDIPVVPNGTYT 82 (174)
T ss_dssp EEEEETSSSEEETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SSSEEEEEE--S-EEEE
T ss_pred EEEECCCCcccCCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCCceEEEEecCCCcEEE
Confidence 689999998878899999999988443220 00 011111222233577999999656789999988999999
Q ss_pred EEEEeecCCCCC----cCCccceEEEEeCcEEEeecccccccC-C--CcceEEE-EEeecCCceEEEEee----------
Q 003139 107 VRLYFYTLPGSN----QHLNSASFTVATDKFVLLSNFTFKNYN-S--SFMFKEY-AINVNSDALTLTFIP---------- 168 (845)
Q Consensus 107 vR~~f~~~~~~~----~~~~~~~f~v~~~~~~~~~~~~~~~~~-~--~~~~~e~-~~~~~~~~~~vc~~~---------- 168 (845)
|||||--..+.. .....-.|+|.++|-+++.+|...... + .+...+| .+.+.++.|.|+|..
T Consensus 83 V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg~L~i~f~~~~~~~~~i~~ 162 (174)
T PF11721_consen 83 VRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDGTLNIQFVWAGKGTLCIPF 162 (174)
T ss_dssp EEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEETTEEETTEEEE--SEEEEEE
T ss_pred EEEEeccccccccccccCCCceEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEeCCcEEEEEEecCCCcEEeec
Confidence 999999776665 455677899999999999999443222 2 2477777 788888999999996
Q ss_pred -CCCCcceeeee
Q 003139 169 -SNNSVAFVNAI 179 (845)
Q Consensus 169 -~~~~~pfi~~i 179 (845)
...+.|.||||
T Consensus 163 ~~~~~~p~IsaI 174 (174)
T PF11721_consen 163 IGSYGNPLISAI 174 (174)
T ss_dssp ESSSSSSSEEEE
T ss_pred cccCCCcEEeeC
Confidence 34466888887
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.32 E-value=1e-11 Score=147.21 Aligned_cols=151 Identities=19% Similarity=0.275 Sum_probs=111.6
Q ss_pred EEEecCCCcc---ccc----C--CceeecCCCCccc---ccccCCcccccCCCC--CCCcccceeEeecc---cceEEEe
Q 003139 36 YLIACGSSQK---VTF----Q--ARTYVPDTEHSSL---SMKSGNSTTASSNSS--APSPIYQSARIFSA---AAFYKFE 98 (845)
Q Consensus 36 ~~i~CG~~~~---~~~----~--~~~~v~D~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~t~R~F~~---~~cY~~~ 98 (845)
|.||||+... .+. . +|.|.+|..|... ...+...+......+ .|..+|+|||.+.. ...|.|+
T Consensus 194 ~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~lty~~~ 273 (623)
T PLN03150 194 KRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTMD 273 (623)
T ss_pred EEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccccCCCccChHHHhhhhccccCCCCceEEEee
Confidence 6899997532 111 2 7999999876322 111222221111122 24557999999964 4599999
Q ss_pred ecccceEEEEEEeecCCCCCcCCccceEEEEeCcEEEeecccccc---cCCCcceEEEEEeecCCceEEEEeeCCCCcce
Q 003139 99 IEHKGRHWVRLYFYTLPGSNQHLNSASFTVATDKFVLLSNFTFKN---YNSSFMFKEYAINVNSDALTLTFIPSNNSVAF 175 (845)
Q Consensus 99 ~~~~g~~~vR~~f~~~~~~~~~~~~~~f~v~~~~~~~~~~~~~~~---~~~~~~~~e~~~~~~~~~~~vc~~~~~~~~pf 175 (845)
+.++|+|+|||||+.............|+|.++|..+..+|.... ....+++++|.++++++.+.|+|+++..+.||
T Consensus 274 v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~g~l~isl~p~~~s~pi 353 (623)
T PLN03150 274 VDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQPKKGTHAI 353 (623)
T ss_pred cCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcccceEEEeEEeecCCeEEEEEeeCCCCcce
Confidence 988899999999999976665667789999999999988874322 12357888999999988899999999877899
Q ss_pred eeeeEEEecCC
Q 003139 176 VNAIEVVSVPD 186 (845)
Q Consensus 176 i~~iE~~~~~~ 186 (845)
||||||+.+-.
T Consensus 354 lNaiEI~~~~~ 364 (623)
T PLN03150 354 INAIEVFEIIT 364 (623)
T ss_pred eeeeeeeeccc
Confidence 99999999876
No 440
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.31 E-value=6e-13 Score=136.64 Aligned_cols=204 Identities=23% Similarity=0.364 Sum_probs=139.5
Q ss_pred HHHHhCCCCCcceEEEEEec-----CCcEEEEEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 003139 550 EMLSKLRHRHLVSLIGYCDE-----RSEMILVYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLHTGAAQ 622 (845)
Q Consensus 550 ~~l~~l~H~niv~l~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 622 (845)
.-|-++-|.|||++..|..+ ..+..++.|||+.|+|..+|+.. ....+..+...+++.||..||.|||+ |.+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 34556679999999998754 34578999999999999999754 23456777778999999999999998 679
Q ss_pred ceeeccCCCCcEEECCCCceEEEeccccCCCCCCC--CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHc
Q 003139 623 SIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD--QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC 700 (845)
Q Consensus 623 ~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Ellt 700 (845)
+|+|+++..+-|++..++-+||.----....+... .........+-++|.+||+-.....+.++|||+||...+||--
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 99999999999999999988884321111100000 0111122346789999999888888999999999999999987
Q ss_pred CCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHH
Q 003139 701 TRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWN 773 (845)
Q Consensus 701 g~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~ 773 (845)
+..--........ .+..+...+ .+.. -..-..++.+|++..|..||+|++++.+
T Consensus 278 lEiq~tnseS~~~-----------~ee~ia~~i----~~le----n~lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESKVE-----------VEENIANVI----IGLE----NGLQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcceee-----------hhhhhhhhe----eecc----CccccCcCcccccCCCCCCcchhhhhcC
Confidence 7632111110000 000011100 0000 0111356789999999999999997654
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=4.1e-11 Score=118.41 Aligned_cols=130 Identities=18% Similarity=0.121 Sum_probs=96.8
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcce-EEEEEecCCcEEEEEEeccCCCcc
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVS-LIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
+.|+.|.++.||+++.. +..+++|....... ....+..|++++..+.+.++++ ++++. ....++||||+++.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 46889999999999876 77899998654432 1234678999999987666554 44443 23458999999998876
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 587 SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGA--AQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 587 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
... .....++.+++++|+.||... ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~~----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TED----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 531 111346789999999999832 22369999999999999 66899999998864
No 442
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.21 E-value=1.1e-11 Score=138.47 Aligned_cols=247 Identities=20% Similarity=0.177 Sum_probs=174.6
Q ss_pred CCCcceeeee--eceEEEEEEEE--c-CCcEEEEEEcCCC--ChHhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcEE
Q 003139 503 KFDESLLLGV--GGFGRVYKGTL--D-DGTKVAVKRGNPR--SEQGIAEFRTEIEMLSKL-RHRHLVSLIGYCDERSEMI 574 (845)
Q Consensus 503 ~f~~~~~LG~--G~fg~Vy~~~~--~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~~~~~~~~ 574 (845)
.|...+.+|. |.+|.||++.. . ++..+|+|+-+.. ..+....=.+|+...+++ .|+|.++........+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566678999 99999999987 3 6788999973322 223333335677777777 4999999888889999999
Q ss_pred EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHH----HHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccc
Q 003139 575 LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAAR----GLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGL 649 (845)
Q Consensus 575 lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGl 649 (845)
+-.|++ +.+|..+.+... ..++......+..+..+ ||.++|. .+++|-|+||.||++.++ ...+++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcce
Confidence 999998 478887775432 23555666677777777 9999998 999999999999999999 8999999999
Q ss_pred cCCCCCCCCcc---cccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhc
Q 003139 650 SKTGPALDQTH---VSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKK 726 (845)
Q Consensus 650 a~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~ 726 (845)
.......+... ......|...|++||..++ -++.++|+|++|.+++|..++-.......... |.. .+.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~------W~~--~r~ 340 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS------WSQ--LRQ 340 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC------ccc--ccc
Confidence 87654422111 1223357778999998754 67899999999999999998876543321111 110 011
Q ss_pred CchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003139 727 GMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVL 771 (845)
Q Consensus 727 ~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl 771 (845)
.. +..++-.....++...+..+++.+|..|++.+.+.
T Consensus 341 -----~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 341 -----GY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred -----cc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 00 01111112233445588899999999999887764
No 443
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.20 E-value=2.3e-10 Score=128.91 Aligned_cols=165 Identities=18% Similarity=0.244 Sum_probs=125.6
Q ss_pred cCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHH
Q 003139 524 DDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRL 603 (845)
Q Consensus 524 ~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~ 603 (845)
.++.+|.|...+..+....+...+-++.|+.+|||||++++...+..+.+|||.|.+ ..|..++.+ +......
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-----l~~~~v~ 107 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-----LGKEEVC 107 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-----hHHHHHH
Confidence 367788877766655544455677889999999999999999999999999999988 356666532 3355666
Q ss_pred HHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCC
Q 003139 604 EICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLT 683 (845)
Q Consensus 604 ~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s 683 (845)
..+.||+.||.+||+ ..+++|++|..+.|+++..|+.||++|.++........ ......--..|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 788999999999996 47899999999999999999999999999865333221 111112223467777543322
Q ss_pred chhHHHHHHHHHHHHHcC
Q 003139 684 EKSDVYSFGVVLMEVLCT 701 (845)
Q Consensus 684 ~ksDV~S~Gvvl~Elltg 701 (845)
-..|.|-||++++|++.|
T Consensus 182 ~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhhHHHHHHHHhCc
Confidence 457999999999999999
No 444
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.19 E-value=6.1e-11 Score=136.04 Aligned_cols=146 Identities=19% Similarity=0.150 Sum_probs=93.8
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcC-CcEEEEEEcCCCChHh----------------------------------HH--
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDD-GTKVAVKRGNPRSEQG----------------------------------IA-- 543 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~-g~~vavK~~~~~~~~~----------------------------------~~-- 543 (845)
-..|+. +.||+|++|.||+|++++ |+.||||...+.-.+. .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 689999999999999987 9999999887552111 01
Q ss_pred ----HHHHHHHHHHhCC----CCCcceEEEEEe-cCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHH-HH
Q 003139 544 ----EFRTEIEMLSKLR----HRHLVSLIGYCD-ERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAAR-GL 613 (845)
Q Consensus 544 ----~~~~E~~~l~~l~----H~niv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL 613 (845)
+|.+|...+.+++ +.+.+.+=.++. -..+.+|||||++|++|.+.-.-.. ...+. ..++...++ -+
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~-~g~d~---~~la~~~v~~~~ 273 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA-AGTDM---KLLAERGVEVFF 273 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh-cCCCH---HHHHHHHHHHHH
Confidence 2344554444442 333333323332 2456789999999999976421111 11121 122222221 12
Q ss_pred HHHhhcCCCceeeccCCCCcEEECCCC----ceEEEeccccCCCC
Q 003139 614 HYLHTGAAQSIIHRDVKTTNILLDDNF----VAKVADFGLSKTGP 654 (845)
Q Consensus 614 ~yLH~~~~~~ivHrDik~~NILl~~~~----~~kl~DFGla~~~~ 654 (845)
..++. .+++|+|+||.||+++.++ ++++.|||++....
T Consensus 274 ~Qif~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 274 TQVFR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 23334 7899999999999999888 99999999987643
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.15 E-value=5.4e-10 Score=115.39 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=113.5
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCCh-HhHHHHHHHHHHHHhCCCC--CcceEEEEEecCC---cEEEEEEecc
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSE-QGIAEFRTEIEMLSKLRHR--HLVSLIGYCDERS---EMILVYEYMA 581 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~~~---~~~lV~Ey~~ 581 (845)
+.|+.|..+.||++...+|+.+++|....... ....++..|.++++.+++. ++.+++.++.+.. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46899999999999987778999998654322 2345788999999999764 4677888876643 5689999999
Q ss_pred CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 003139 582 NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGA----------------------------------------- 620 (845)
Q Consensus 582 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------- 620 (845)
+.+|...+.. ..++..++..++.++++.|..||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9988876632 35788888899999999999999521
Q ss_pred ------------CCceeeccCCCCcEEECC--CCceEEEeccccCC
Q 003139 621 ------------AQSIIHRDVKTTNILLDD--NFVAKVADFGLSKT 652 (845)
Q Consensus 621 ------------~~~ivHrDik~~NILl~~--~~~~kl~DFGla~~ 652 (845)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998875
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=5e-10 Score=108.00 Aligned_cols=130 Identities=26% Similarity=0.353 Sum_probs=104.6
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCCC--hH------hHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEec
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPRS--EQ------GIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~--~~------~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
++++|+-+.+|.+.+. |..+++|.-.++. .. ..++-.+|.+++.+++--.|.-.+=+..+.....|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999875 4557777433321 11 1245678999999998777777777777888899999999
Q ss_pred cCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 581 ANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 581 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+|..|.+.+... +..++..+-+-+.-||. .+|+|+||.++||++..+. +.++||||+..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888533 36788888888999999 9999999999999999774 99999999976
No 447
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.11 E-value=4.1e-11 Score=118.44 Aligned_cols=142 Identities=27% Similarity=0.410 Sum_probs=82.9
Q ss_pred EEEeecCCCccCCCCCcCCccccCCCCceeeCCCCceeec-cCceeeeeccCCcccChHHHHHHhhhccCCCCccceeeE
Q 003139 213 VYRLNMGGPLITAQNDTLGRTWENDETYLHVNSSAVNVSV-RPSAIRYTASVTAETAPNWVYATAEMMGDANVPEVNFNI 291 (845)
Q Consensus 213 ~~r~n~g~~~i~~~~D~~~R~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~~Vy~ta~~~~~~~~~~~~~~l 291 (845)
++||||||+.. .|.....|++|..+...... ..... ++.........-.+..++.+|+|+|.... ++
T Consensus 2 ~~~IN~Gg~~~---~~~~g~~w~~D~~~~~g~~~-y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~--------~f 69 (174)
T PF11721_consen 2 VLRINAGGPAY---TDSSGIVWEADQYYTGGSWG-YYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS--------SF 69 (174)
T ss_dssp EEEEEETSSSE---EETTTEEE-SSSSSTTSS------------SSTTS--TTS-HHHHHTTT-----SS--------SE
T ss_pred EEEEECCCCcc---cCCCCCEEcCCCCCCCCCcc-cccccccccccccccccccCCCchhhhHhhcCCCC--------ce
Confidence 68999999865 78899999999877532220 00000 00000000112245667899999998422 38
Q ss_pred EEEeecCCCCceEEEEEccCccccc------cceEEEEEEecccccCCCcchhhhcCCccceeeeee-eeeecCCCCeeE
Q 003139 292 TWVLPVEPNFTYFVRVHLCDIASLS------MNNLVFNLYINDDIAQPSVDLSTLTNGLNVPYYKDF-VCNASADSNTLT 364 (845)
Q Consensus 292 tw~~~~~~~~~y~vrlhf~ei~s~~------~~~r~F~i~in~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~l~ 364 (845)
+|.+|+.++..|.|+|||+|+.... .++|+|+|++||+.+..++|+...+++...+..+.+ .+++ ..+.|.
T Consensus 70 ~Y~ip~~~~G~Y~V~L~FaE~~~~~~~~~~~~G~RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v--~dg~L~ 147 (174)
T PF11721_consen 70 SYDIPVVPNGTYTVRLHFAELYFGASGGASGPGQRVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTV--TDGTLN 147 (174)
T ss_dssp EEEEE--S-EEEEEEEEEE-SSS--------SSSS-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEE--ETTEEE
T ss_pred EEEEecCCCcEEEEEEEeccccccccccccCCCceEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEE--eCCcEE
Confidence 9999988889999999999998776 888999999999999999999999987664444444 3333 234555
Q ss_pred EEec
Q 003139 365 VSVG 368 (845)
Q Consensus 365 v~~~ 368 (845)
|+..
T Consensus 148 i~f~ 151 (174)
T PF11721_consen 148 IQFV 151 (174)
T ss_dssp TTEE
T ss_pred EEEE
Confidence 5444
No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=9.6e-10 Score=105.33 Aligned_cols=143 Identities=21% Similarity=0.237 Sum_probs=110.3
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC--------hHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS--------EQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
...+|-+|+-+.|+++.+. |+..+||.-..+. .-..++..+|.+.+.+++--.|....-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4568999999999999987 7888888533221 112456788999999988767766666677777789999
Q ss_pred EeccC-CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCC---ceEEEeccccCC
Q 003139 578 EYMAN-GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNF---VAKVADFGLSKT 652 (845)
Q Consensus 578 Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~---~~kl~DFGla~~ 652 (845)
||+++ .++.+++......+........++..|-+.+.-||. .+|||+||..+||+|..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 477787765443343444447899999999999999 9999999999999996543 458999999865
No 449
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.07 E-value=1.6e-09 Score=108.50 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=96.5
Q ss_pred eeeeeceEEEEEEEEcC-------CcEEEEEEcCCCC----------------------hHhHHHH----HHHHHHHHhC
Q 003139 509 LLGVGGFGRVYKGTLDD-------GTKVAVKRGNPRS----------------------EQGIAEF----RTEIEMLSKL 555 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-------g~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~~l 555 (845)
.||.|.-+.||.|.-.+ +..+|||..+... ....+.+ .+|.+.|+++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 68999999999997543 4789999532210 0112223 3799999998
Q ss_pred CC--CCcceEEEEEecCCcEEEEEEeccCCCccc-cccCCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeccCCC
Q 003139 556 RH--RHLVSLIGYCDERSEMILVYEYMANGPLRS-HLYGTDLPPLSWKQRLEICIGAARGLHYL-HTGAAQSIIHRDVKT 631 (845)
Q Consensus 556 ~H--~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDik~ 631 (845)
.. -++.+++++ ...+|||||+.+..+.. .|.. ..++..+..++..+++.+|..| |+ .++|||||++
T Consensus 84 ~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~ 153 (197)
T cd05146 84 QKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSE 153 (197)
T ss_pred HHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence 54 466666754 56799999997654432 1211 1344556778889999999999 77 8999999999
Q ss_pred CcEEECCCCceEEEeccccCC
Q 003139 632 TNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 632 ~NILl~~~~~~kl~DFGla~~ 652 (845)
.|||+++ +.+.|+|||.+..
T Consensus 154 ~NIL~~~-~~v~iIDF~qav~ 173 (197)
T cd05146 154 YNMLWHD-GKVWFIDVSQSVE 173 (197)
T ss_pred HHEEEEC-CcEEEEECCCcee
Confidence 9999974 6899999998865
No 450
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=2.6e-10 Score=127.66 Aligned_cols=249 Identities=18% Similarity=0.185 Sum_probs=174.5
Q ss_pred HHhcCCCcceeeeeeceEEEEEEEEc--CCcEEEEEEcCCCChHhHHHH--HHHHHHHHhC-CCCCcceEEEEEecCCcE
Q 003139 499 DATNKFDESLLLGVGGFGRVYKGTLD--DGTKVAVKRGNPRSEQGIAEF--RTEIEMLSKL-RHRHLVSLIGYCDERSEM 573 (845)
Q Consensus 499 ~at~~f~~~~~LG~G~fg~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~--~~E~~~l~~l-~H~niv~l~g~~~~~~~~ 573 (845)
..+.+|.+...||.|.|+.|++...+ ++..+++|...........+. ..|+-+...+ .|.+++.....+.+....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567888899999999999998754 577899997665433322221 3466655555 588888876666666677
Q ss_pred EEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC-CceEEEeccccCC
Q 003139 574 ILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN-FVAKVADFGLSKT 652 (845)
Q Consensus 574 ~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~-~~~kl~DFGla~~ 652 (845)
++--||++++++...+ .-...++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..++.|||++..
T Consensus 342 ~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccc
Confidence 7999999999887665 222356778889999999999999998 999999999999999876 8899999999864
Q ss_pred CCCCCCcccccccccCCCcC--ChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchh
Q 003139 653 GPALDQTHVSTAVKGSFGYL--DPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLD 730 (845)
Q Consensus 653 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 730 (845)
.... .......-+++ +|+......+-.+.|++|||.-+.|.+++...-.... +|.. +..+.+
T Consensus 417 ~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~~--i~~~~~- 480 (524)
T KOG0601|consen 417 LAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSLT--IRSGDT- 480 (524)
T ss_pred ccee-----cccccccccccccchhhccccccccccccccccccccccccCcccCcccc--------ccee--eecccc-
Confidence 2111 11112223344 5556667788899999999999999999875332111 1110 011100
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHHHHHHHh
Q 003139 731 QIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYA 777 (845)
Q Consensus 731 ~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl~~L~~~ 777 (845)
++ . +.....+..++..++..++..||.+.++..+.+..
T Consensus 481 ----p~----~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 481 ----PN----L-PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ----cC----C-CchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 01 1 22225677888889999999999998887666543
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.95 E-value=1.2e-08 Score=111.66 Aligned_cols=167 Identities=17% Similarity=0.246 Sum_probs=125.6
Q ss_pred eEEEEEEEEc-CCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEe----cCCcEEEEEEeccC-CCcccc
Q 003139 515 FGRVYKGTLD-DGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCD----ERSEMILVYEYMAN-GPLRSH 588 (845)
Q Consensus 515 fg~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~----~~~~~~lV~Ey~~~-gsL~~~ 588 (845)
-.+.||+... +|..+++||+.....+....-..-+++++++.|.|+|++..++. .+..+++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 3578999865 89999999984433333323345688999999999999998875 34568999999986 466554
Q ss_pred ccCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 589 LYGT-------------DLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 589 l~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
-... .....++..++.++.|+..||.++|+ .|+..+-|.+++||++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 3321 12346778899999999999999999 8999999999999999999999998887755322
Q ss_pred CCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCC
Q 003139 656 LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRP 703 (845)
Q Consensus 656 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~ 703 (845)
+. . |-+.. -.+-|.=.||.+++-|.||+.
T Consensus 446 -d~-------------~--~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 -DP-------------T--EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred -CC-------------C--cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 11 0 11111 236799999999999999974
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.85 E-value=2.9e-08 Score=104.93 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=102.4
Q ss_pred eeeeeceEEEEEEEEcCCcEEEEEEcCCCChH-hHH----------HHHHHHHHHHhCCCCC--cceEEEEEec-----C
Q 003139 509 LLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQ-GIA----------EFRTEIEMLSKLRHRH--LVSLIGYCDE-----R 570 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~-~~~----------~~~~E~~~l~~l~H~n--iv~l~g~~~~-----~ 570 (845)
.+-+-....|.+..+. |+.+.||+....... ..+ .+.+|...+.++...+ ..+++++... .
T Consensus 29 ~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 4544444557777664 788999976544321 122 3778999998885433 3455666543 2
Q ss_pred CcEEEEEEeccCC-CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECC-------CCce
Q 003139 571 SEMILVYEYMANG-PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDD-------NFVA 642 (845)
Q Consensus 571 ~~~~lV~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~-------~~~~ 642 (845)
..-+||+|++++. +|.+++......+.+...+..++.+++..+.-||+ .+|+|+|++++|||++. +..+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceE
Confidence 3578999999886 78888743222345667778999999999999999 99999999999999975 5789
Q ss_pred EEEeccccCC
Q 003139 643 KVADFGLSKT 652 (845)
Q Consensus 643 kl~DFGla~~ 652 (845)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998864
No 453
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.83 E-value=6.2e-10 Score=130.45 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=164.3
Q ss_pred cCCCcceeeeeeceEEEEEEEEc-CCcEEEEEEcC---CCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEE
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLD-DGTKVAVKRGN---PRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVY 577 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~-~g~~vavK~~~---~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~ 577 (845)
..|.+.+-+-+|.++.++.++-. .|...+.|... .......+..+.+-.++-.-+||-++....-+.......||+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 34555556778899988876533 23222332211 111112233333444444445666665554455667889999
Q ss_pred EeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCC-
Q 003139 578 EYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPAL- 656 (845)
Q Consensus 578 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~- 656 (845)
+|..+++|...|+... ..+..-....+..+...++|||. ..+.|||++|.|+|+..++..+++|||+.......
T Consensus 884 ~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred HHhccCCchhhhhcCC--CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCcccccccccccc
Confidence 9999999999886543 45555556667778889999998 66999999999999999999999999843221000
Q ss_pred --------------------------C--CcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 003139 657 --------------------------D--QTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPV 708 (845)
Q Consensus 657 --------------------------~--~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~~~~ 708 (845)
. .........||+.|.+||.+.+......+|+|++|++++|.++|.+||+..
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 001123457899999999999999999999999999999999999999765
Q ss_pred CCcccccHHHHHHHHhhcCchhhhhccccC-CCCCHHHHHHHHHHHHHhhhhCCCCCCCHH
Q 003139 709 LPREQVNIAEWAMTWQKKGMLDQIMDSNLV-GKVNPASLKKFGETAEKCLAEHGVDRPSMG 768 (845)
Q Consensus 709 ~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~ 768 (845)
.+.... +.++...+. ..-+........+++...+..+|.+|-.|.
T Consensus 1039 tpq~~f---------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQQIF---------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred chhhhh---------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 543311 111111110 011223445566778888889999997765
No 454
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.72 E-value=6.6e-08 Score=96.47 Aligned_cols=124 Identities=26% Similarity=0.290 Sum_probs=83.0
Q ss_pred EEEEEEEcCCcEEEEEEcCCCC--------------------------hHhHHHHHHHHHHHHhCCCC--CcceEEEEEe
Q 003139 517 RVYKGTLDDGTKVAVKRGNPRS--------------------------EQGIAEFRTEIEMLSKLRHR--HLVSLIGYCD 568 (845)
Q Consensus 517 ~Vy~~~~~~g~~vavK~~~~~~--------------------------~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~ 568 (845)
.||.|...+|..+|||...... ........+|.+.|.++..- ++.+++++-
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999533210 01123467899999999876 455666442
Q ss_pred cCCcEEEEEEecc--CCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHH-hhcCCCceeeccCCCCcEEECCCCceEEE
Q 003139 569 ERSEMILVYEYMA--NGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYL-HTGAAQSIIHRDVKTTNILLDDNFVAKVA 645 (845)
Q Consensus 569 ~~~~~~lV~Ey~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDik~~NILl~~~~~~kl~ 645 (845)
..+|||||++ +..+..+.. . .++......++.+++..+..+ |. .+|+|+||.+.|||++++ .+.|+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~-~---~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD-V---DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH-C---GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHh-c---cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEEEE
Confidence 4589999998 555544332 1 122445677888888866664 66 899999999999999988 99999
Q ss_pred eccccCC
Q 003139 646 DFGLSKT 652 (845)
Q Consensus 646 DFGla~~ 652 (845)
|||.+..
T Consensus 149 Df~qav~ 155 (188)
T PF01163_consen 149 DFGQAVD 155 (188)
T ss_dssp -GTTEEE
T ss_pred ecCccee
Confidence 9998865
No 455
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=98.71 E-value=6.6e-08 Score=106.56 Aligned_cols=147 Identities=22% Similarity=0.335 Sum_probs=101.7
Q ss_pred eEEEecCCCc----c-cccCCceeecC---CCCcccccccCCccc---ccCCCCCCCcccceeEeeccc-----ceEEEe
Q 003139 35 NYLIACGSSQ----K-VTFQARTYVPD---TEHSSLSMKSGNSTT---ASSNSSAPSPIYQSARIFSAA-----AFYKFE 98 (845)
Q Consensus 35 ~~~i~CG~~~----~-~~~~~~~~v~D---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~t~R~F~~~-----~cY~~~ 98 (845)
.+++|||+.. + .|.-+|+|.+. ...... .+...+. ....-..|..+|+|||.-+.. ..|.+
T Consensus 180 ~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~i--st~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw~~- 256 (347)
T PF12819_consen 180 VYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNI--STTSNININSSNNPYDAPSAVYQTARTPSNSSDPLNLTWSF- 256 (347)
T ss_pred EEeecCCCcccccCCCCCcceeeccccccCcccccc--ccceeeecccCCccCcChHHHHHhhhcccccccceEEEecc-
Confidence 4689999764 1 22358999963 222222 2222221 223445566779999988433 27777
Q ss_pred ecccceEEEEEEeecCCCCCcCCccceEEEEeCcEEEeecccccc--cCCCcceEEEEEeecC-CceEEEEeeCCCC--c
Q 003139 99 IEHKGRHWVRLYFYTLPGSNQHLNSASFTVATDKFVLLSNFTFKN--YNSSFMFKEYAINVNS-DALTLTFIPSNNS--V 173 (845)
Q Consensus 99 ~~~~g~~~vR~~f~~~~~~~~~~~~~~f~v~~~~~~~~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~vc~~~~~~~--~ 173 (845)
+..+-.|+|||||+-......+...-.|+|.+||......++... ....+++..|.+.+++ ..+.|+|.+++.+ -
T Consensus 257 ~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~isL~~t~~S~lp 336 (347)
T PF12819_consen 257 VDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPDSGFLNISLGPTPDSTLP 336 (347)
T ss_pred CCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcccccCcceEeecceEEEecCCCEEEEEEEeCCCCCcC
Confidence 666668999999998887655666788999999998876665422 2233457788888875 4799999999776 5
Q ss_pred ceeeeeEEEec
Q 003139 174 AFVNAIEVVSV 184 (845)
Q Consensus 174 pfi~~iE~~~~ 184 (845)
|+|||+|++.+
T Consensus 337 piLNalEIy~v 347 (347)
T PF12819_consen 337 PILNALEIYKV 347 (347)
T ss_pred ceeEeeeeEeC
Confidence 99999999864
No 456
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.64 E-value=1e-06 Score=94.36 Aligned_cols=256 Identities=14% Similarity=0.158 Sum_probs=158.0
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhC-CCCCcceEEEEE------ecCC-cEEEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKL-RHRHLVSLIGYC------DERS-EMILVYE 578 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~g~~------~~~~-~~~lV~E 578 (845)
.+.||+|+.+.+|-.--- +. .+.|+..........+ .++.|... .||-+-.-+.|= -+++ ..-++|.
T Consensus 16 gr~LgqGgea~ly~l~e~-~d-~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV-RD-QVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CccccCCccceeeecchh-hc-hhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 446999999999964211 11 2344433322222122 23334443 566544323321 1222 3667888
Q ss_pred eccCCC-cccccc----CCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCC
Q 003139 579 YMANGP-LRSHLY----GTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTG 653 (845)
Q Consensus 579 y~~~gs-L~~~l~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~ 653 (845)
.+++.. +..++. ....+..+|.-.+++++.+|.+.+-||+ .|.+-+|+.++|+|+.+++.+.|.|=..-...
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeec
Confidence 877642 222221 1234568999999999999999999999 89999999999999999999999986554432
Q ss_pred CCCCCcccccccccCCCcCChhhhc-----cCCCCchhHHHHHHHHHHHHHcC-CCCCCCCCCcccc--cHH-HHHHHHh
Q 003139 654 PALDQTHVSTAVKGSFGYLDPEYFR-----RQQLTEKSDVYSFGVVLMEVLCT-RPALNPVLPREQV--NIA-EWAMTWQ 724 (845)
Q Consensus 654 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~ksDV~S~Gvvl~Elltg-~~p~~~~~~~~~~--~l~-~~~~~~~ 724 (845)
.........+|...|.+||.-. +..-+...|-|.+||+++|+|.| +.||.+....... .+. ..+
T Consensus 168 ---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia---- 240 (637)
T COG4248 168 ---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIA---- 240 (637)
T ss_pred ---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhh----
Confidence 2223334567889999999754 34557789999999999999987 8888754322110 000 000
Q ss_pred hcCchhhhhcccc-----CCCCC-HHHHHHHHHHHHHhhhhC--CCCCCCHHHHHHHHHHhh
Q 003139 725 KKGMLDQIMDSNL-----VGKVN-PASLKKFGETAEKCLAEH--GVDRPSMGDVLWNLEYAL 778 (845)
Q Consensus 725 ~~~~~~~~~d~~l-----~~~~~-~~~~~~l~~l~~~cl~~~--p~~RPs~~~vl~~L~~~~ 778 (845)
.+.....-|... -..++ .-.+..+..+-.+|+... +.-||+++.++..|..+.
T Consensus 241 -~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 241 -HGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred -cceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHH
Confidence 011111111110 01122 234466777788888743 568999999998887654
No 457
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.60 E-value=3.8e-07 Score=93.43 Aligned_cols=133 Identities=24% Similarity=0.213 Sum_probs=95.8
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCC--------------------C--hHhHHHHHHHHHHHHhCCCC--Ccc
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPR--------------------S--EQGIAEFRTEIEMLSKLRHR--HLV 561 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~--------------------~--~~~~~~~~~E~~~l~~l~H~--niv 561 (845)
+...||.|.-+.||.|....|.++|||..... + .-......+|.++|.+|... .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 44589999999999999999999999942211 0 01123457899999999765 777
Q ss_pred eEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc
Q 003139 562 SLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV 641 (845)
Q Consensus 562 ~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~ 641 (845)
+.+++ +...+||||+++-.|...- ++-...-.|+..|++-+.-+-. .|+||+|+.+-||+++++|.
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred Ccccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCCC
Confidence 77754 5678999999987666542 1222233344444444443334 78999999999999999999
Q ss_pred eEEEeccccCC
Q 003139 642 AKVADFGLSKT 652 (845)
Q Consensus 642 ~kl~DFGla~~ 652 (845)
+.++||--+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999976654
No 458
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.53 E-value=2.9e-08 Score=112.82 Aligned_cols=151 Identities=19% Similarity=0.278 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCC-------CcccccccccCCCcCChhhhc
Q 003139 606 CIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALD-------QTHVSTAVKGSFGYLDPEYFR 678 (845)
Q Consensus 606 ~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~ 678 (845)
+.+++.||.|+|. ..++||++|.|++|.++.++..||+.|+.+....... +.....-......|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3445599999998 5789999999999999999999999999886533211 111111223456799999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHcCCCC-CCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhh
Q 003139 679 RQQLTEKSDVYSFGVVLMEVLCTRPA-LNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCL 757 (845)
Q Consensus 679 ~~~~s~ksDV~S~Gvvl~Elltg~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl 757 (845)
+...+.++|+||+||+++-+..|+.+ +....... .+. ...-.+..-........+.++.+-+.+.+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-----~~~--------~~~~~~~~~~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-----SYS--------FSRNLLNAGAFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcc-----hhh--------hhhcccccccccccccCcHHHHHHHHHHh
Confidence 98899999999999999999955443 32211110 000 00001111111223456777888889999
Q ss_pred hhCCCCCCCHHHHH
Q 003139 758 AEHGVDRPSMGDVL 771 (845)
Q Consensus 758 ~~~p~~RPs~~~vl 771 (845)
..++..||++.++.
T Consensus 250 ~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLL 263 (700)
T ss_pred cCCcccCcchhhhh
Confidence 99999999877754
No 459
>PRK09902 hypothetical protein; Provisional
Probab=98.52 E-value=1.1e-06 Score=88.14 Aligned_cols=138 Identities=19% Similarity=0.188 Sum_probs=105.3
Q ss_pred eeeeceEEEEEEEEcCCcEEEEEEcCCC---C---hHhHHHHHHHHHHHHhCCCC--CcceEEEEEe-c----CCcEEEE
Q 003139 510 LGVGGFGRVYKGTLDDGTKVAVKRGNPR---S---EQGIAEFRTEIEMLSKLRHR--HLVSLIGYCD-E----RSEMILV 576 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~~g~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~-~----~~~~~lV 576 (845)
-|.||-+.|++-.+. |+.+-+|+.... + +.....|.+|+..|.++... .+.+.+ ++. . .-.-+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998776 557999975521 1 23456799999999998532 345555 332 1 1246899
Q ss_pred EEeccC-CCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCc--eEEEeccccCC
Q 003139 577 YEYMAN-GPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFV--AKVADFGLSKT 652 (845)
Q Consensus 577 ~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~--~kl~DFGla~~ 652 (845)
+|-+++ -+|.+++.+....+.+...+..++.++++.+.-||+ .++.|+|+.+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 578888765555567888889999999999999999 99999999999999986666 99999987764
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.42 E-value=1.4e-06 Score=99.66 Aligned_cols=145 Identities=19% Similarity=0.270 Sum_probs=95.7
Q ss_pred cCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhH------------------------------H--------
Q 003139 502 NKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGI------------------------------A-------- 543 (845)
Q Consensus 502 ~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~------------------------------~-------- 543 (845)
.+|+. ..|+.++-|.||+|++++|+.||||...+.-.+.. +
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 34543 47999999999999999999999998766432211 1
Q ss_pred --HHHHHHHHHHhCC-----CCCcceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHH-HHH
Q 003139 544 --EFRTEIEMLSKLR-----HRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARG-LHY 615 (845)
Q Consensus 544 --~~~~E~~~l~~l~-----H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~g-L~y 615 (845)
++..|...+.+++ .+++.-.-=|.+-.+...|+|||++|-.+.+...-.. ..++-+. |+..++++ +..
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q 280 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQ 280 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHH
Confidence 1344555554442 2333222222233567899999999999988743222 3345333 33333332 223
Q ss_pred HhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCC
Q 003139 616 LHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGP 654 (845)
Q Consensus 616 LH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~ 654 (845)
+-. .+++|.|.+|.||+++.++++.+.|||+.....
T Consensus 281 ~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 281 LLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred HHh---cCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 322 689999999999999999999999999987643
No 461
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=1.2e-06 Score=89.43 Aligned_cols=105 Identities=26% Similarity=0.295 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHhCCC--CCcceEEEEEecCC----cEEEEEEeccCC-CccccccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 003139 543 AEFRTEIEMLSKLRH--RHLVSLIGYCDERS----EMILVYEYMANG-PLRSHLYGTDLPPLSWKQRLEICIGAARGLHY 615 (845)
Q Consensus 543 ~~~~~E~~~l~~l~H--~niv~l~g~~~~~~----~~~lV~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~y 615 (845)
....+|.+.+.+++. -...+.+++..... .-+||+|++++. +|.+++.... .++......++.++++.+.-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHHH
Confidence 457788888888753 34566777765532 358999999884 7888885432 25666788999999999999
Q ss_pred HhhcCCCceeeccCCCCcEEECCCC---ceEEEeccccCC
Q 003139 616 LHTGAAQSIIHRDVKTTNILLDDNF---VAKVADFGLSKT 652 (845)
Q Consensus 616 LH~~~~~~ivHrDik~~NILl~~~~---~~kl~DFGla~~ 652 (845)
||+ .+|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 134 lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999 9999999999999999887 899999998875
No 462
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.32 E-value=8.2e-06 Score=84.52 Aligned_cols=133 Identities=18% Similarity=0.160 Sum_probs=86.9
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCc--ceEEEEEecCCcEEEEEEeccCCC-
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHL--VSLIGYCDERSEMILVYEYMANGP- 584 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~ni--v~l~g~~~~~~~~~lV~Ey~~~gs- 584 (845)
..||+|..+.||+. .|..+++|...... ......+|.+++..+..-.+ .+.++++...+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 36899999999984 24567888866533 22456789999999865444 667888877778889999998863
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHh---------------------------------------h-cCCCce
Q 003139 585 LRSHLYGTDLPPLSWKQRLEICIGAARGLHYLH---------------------------------------T-GAAQSI 624 (845)
Q Consensus 585 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH---------------------------------------~-~~~~~i 624 (845)
+...+. .+......++.++++.+.-|| . .....+
T Consensus 82 ~~~~~~------~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~ 155 (226)
T TIGR02172 82 FSRIIS------DNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC 155 (226)
T ss_pred hhhhhc------CCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence 221111 011111122222222222222 1 112457
Q ss_pred eeccCCCCcEEECCCCceEEEeccccCC
Q 003139 625 IHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 625 vHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+|+|+.|.||++++++ +.|+||+.+..
T Consensus 156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 156 LHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred EecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 8999999999999888 99999998865
No 463
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.30 E-value=6.2e-06 Score=83.14 Aligned_cols=137 Identities=17% Similarity=0.173 Sum_probs=93.4
Q ss_pred hcCCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHH---------HHHHHHHHhCCCCC---cceEEEEE-
Q 003139 501 TNKFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEF---------RTEIEMLSKLRHRH---LVSLIGYC- 567 (845)
Q Consensus 501 t~~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~H~n---iv~l~g~~- 567 (845)
.++|...+++-......|.+-..+ |..+++|..........+.| .+++..+.+++... ...++.++
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 467888888888777777777665 78899998766543322222 33444444443322 22322222
Q ss_pred ----ecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceE
Q 003139 568 ----DERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAK 643 (845)
Q Consensus 568 ----~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~k 643 (845)
.-....+|||||++|..|.++.. ++. .++..+..++.-||+ .|+.|+|++|.|++++++ .++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~-~i~ 174 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN-GIR 174 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC-cEE
Confidence 22345679999999988877641 222 355667788999999 999999999999999965 599
Q ss_pred EEeccccCC
Q 003139 644 VADFGLSKT 652 (845)
Q Consensus 644 l~DFGla~~ 652 (845)
+.||+..+.
T Consensus 175 iID~~~k~~ 183 (229)
T PF06176_consen 175 IIDTQGKRM 183 (229)
T ss_pred EEECccccc
Confidence 999987654
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.18 E-value=5.2e-05 Score=76.00 Aligned_cols=103 Identities=23% Similarity=0.300 Sum_probs=82.9
Q ss_pred HHHHHHHHhCCC-CCcceEEEEEecCCcEEEEEEeccCCCccccccC-CCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCc
Q 003139 546 RTEIEMLSKLRH-RHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG-TDLPPLSWKQRLEICIGAARGLHYLHTGAAQS 623 (845)
Q Consensus 546 ~~E~~~l~~l~H-~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 623 (845)
..|.-+|..+++ +++.+++|+|-. ++|.||.+.+++...-.. .....-+|..|.+|+.++++.+++|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 358888999976 699999999943 789999987766422000 11124689999999999999999999866666
Q ss_pred eeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 624 IIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 624 ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+...|++++|+-+++++++|++|...+..
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 88899999999999999999999987754
No 465
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.12 E-value=2.6e-05 Score=80.92 Aligned_cols=143 Identities=22% Similarity=0.243 Sum_probs=86.4
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCC--CcceEEEEEec---CCcEEEEEEecc
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHR--HLVSLIGYCDE---RSEMILVYEYMA 581 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~g~~~~---~~~~~lV~Ey~~ 581 (845)
.+.|+.|..+.||+....+ ..+++|..... .....+..|..++..+... .+.+++.++.. ....+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 3578999999999999886 68999986544 4556778899998888543 34567765532 334689999999
Q ss_pred CCCccc----------------cc---cCC--CCCCCCHHH---------HHHH------------HHHHHH-HHHHHhh
Q 003139 582 NGPLRS----------------HL---YGT--DLPPLSWKQ---------RLEI------------CIGAAR-GLHYLHT 618 (845)
Q Consensus 582 ~gsL~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~~~ia~-gL~yLH~ 618 (845)
+..+.. .+ +.. ....+.+.. .... ...+.+ .++.+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 987776 11 111 111111111 0000 111222 3333332
Q ss_pred ----cCCCceeeccCCCCcEEEC-CCCceEEEeccccCC
Q 003139 619 ----GAAQSIIHRDVKTTNILLD-DNFVAKVADFGLSKT 652 (845)
Q Consensus 619 ----~~~~~ivHrDik~~NILl~-~~~~~kl~DFGla~~ 652 (845)
.....++|+|+.++|||++ +++.+.|.||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2346799999999999999 666778999987754
No 466
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.02 E-value=0.00015 Score=73.99 Aligned_cols=151 Identities=20% Similarity=0.207 Sum_probs=98.3
Q ss_pred ccHHHHHHHhcCCCcceee---eeeceEEEEEEEEcCCcEEEEEEcCCCChHhH------------------------HH
Q 003139 492 FMFQEILDATNKFDESLLL---GVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGI------------------------AE 544 (845)
Q Consensus 492 ~~~~el~~at~~f~~~~~L---G~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~------------------------~~ 544 (845)
.++..|.....+..+..+. .+|.-+.||+|.-.++..+|||+......... .-
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 4455555555555555554 46777899999888899999997554321110 11
Q ss_pred HHHHHHHHHhCC--CCCcceEEEEEecCCcEEEEEEeccCCCcc-ccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Q 003139 545 FRTEIEMLSKLR--HRHLVSLIGYCDERSEMILVYEYMANGPLR-SHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAA 621 (845)
Q Consensus 545 ~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~-~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 621 (845)
..+|..-|.++. +=.+.+.+++. +-.|||||+....+. -.|.. .++...+...+..++++.+.-|-. .
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~--~ 185 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYK--E 185 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHH--h
Confidence 245777777663 34445555543 348999999654211 11111 122233566677777777777754 3
Q ss_pred CceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 622 QSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 622 ~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.++||+||..-|||+. ++.+.|+|+|-|..
T Consensus 186 a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~ 215 (268)
T COG1718 186 AGLVHGDLSEYNILVH-DGEPYIIDVSQAVT 215 (268)
T ss_pred cCcccccchhhheEEE-CCeEEEEECccccc
Confidence 6899999999999999 78999999998865
No 467
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.00 E-value=6.5e-05 Score=78.92 Aligned_cols=139 Identities=18% Similarity=0.174 Sum_probs=85.8
Q ss_pred eeeece-EEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCcEEEEEEeccCCCccc
Q 003139 510 LGVGGF-GRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR-HRHLVSLIGYCDERSEMILVYEYMANGPLRS 587 (845)
Q Consensus 510 LG~G~f-g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~g~~~~~~~~~lV~Ey~~~gsL~~ 587 (845)
|-.|.. ..||+...+ +..+++|+..... ..+..+|+++++.+. +--+.+++++....+..++|||+++|.+|..
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444555 789998765 4788889875543 345667999888884 4445577887776667899999999987764
Q ss_pred cc-------------------cCCCC--CCCC--HHHHHHHHHH--------------------HHHHHHHHhh----cC
Q 003139 588 HL-------------------YGTDL--PPLS--WKQRLEICIG--------------------AARGLHYLHT----GA 620 (845)
Q Consensus 588 ~l-------------------~~~~~--~~l~--~~~~~~i~~~--------------------ia~gL~yLH~----~~ 620 (845)
.. +.... .++. +...+..... +...++.|-. ..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 32 11100 0111 0011100000 1111122211 11
Q ss_pred CCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 621 AQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 621 ~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
...++|+|+.|.|||++++....|+||+.+..
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 24589999999999999987889999998765
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.96 E-value=5.1e-05 Score=86.78 Aligned_cols=145 Identities=21% Similarity=0.225 Sum_probs=91.5
Q ss_pred CCCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhH-------------------------------H------HH
Q 003139 503 KFDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGI-------------------------------A------EF 545 (845)
Q Consensus 503 ~f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~-------------------------------~------~~ 545 (845)
.|+. +.||.-..|.||+|++++|+.||||...+.-++.. + +|
T Consensus 163 ~f~~-~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF 241 (538)
T KOG1235|consen 163 EFDE-EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDF 241 (538)
T ss_pred hcCc-chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcch
Confidence 4443 37999999999999999999999998665422210 1 14
Q ss_pred HHHHHHHHhC----CCCCcce---EEEEE-ecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 003139 546 RTEIEMLSKL----RHRHLVS---LIGYC-DERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLH 617 (845)
Q Consensus 546 ~~E~~~l~~l----~H~niv~---l~g~~-~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH 617 (845)
.+|.+-..++ +|-++.. .=.++ .-.....|+||||+|..+.+...-. ...++-.. |+..+.++.. +
T Consensus 242 ~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~-~~gi~~~~---i~~~l~~~~~--~ 315 (538)
T KOG1235|consen 242 TKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAID-KRGISPHD---ILNKLVEAYL--E 315 (538)
T ss_pred HHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHH-HcCCCHHH---HHHHHHHHHH--H
Confidence 4444443333 3555111 11111 2335789999999999887764211 12344443 3333333322 1
Q ss_pred hcCCCceeeccCCCCcEEECC----CCceEEEeccccCCCC
Q 003139 618 TGAAQSIIHRDVKTTNILLDD----NFVAKVADFGLSKTGP 654 (845)
Q Consensus 618 ~~~~~~ivHrDik~~NILl~~----~~~~kl~DFGla~~~~ 654 (845)
.-...|++|+|-+|.||+++. ++++.+-|||+.....
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 111268999999999999984 6799999999987643
No 469
>PLN02876 acyl-CoA dehydrogenase
Probab=97.93 E-value=0.00014 Score=89.84 Aligned_cols=148 Identities=17% Similarity=0.280 Sum_probs=93.0
Q ss_pred ceeeeeeceEEEEEEEEcCC---cEEEEEEcCCCC-hHhHHHHHHHHHHHHhCC-CCCc--ceEEEEEecC---CcEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLDDG---TKVAVKRGNPRS-EQGIAEFRTEIEMLSKLR-HRHL--VSLIGYCDER---SEMILV 576 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV 576 (845)
...++.|.+..+|+....++ ..+++|+..... ......+.+|.++|+.+. |.++ .+++++|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 45688999999999887654 367888754432 122356789999999995 6665 7788888764 467899
Q ss_pred EEeccCCCcccc-----------------------ccCCCC---------CCCCHH--HHHHHH---------------H
Q 003139 577 YEYMANGPLRSH-----------------------LYGTDL---------PPLSWK--QRLEIC---------------I 607 (845)
Q Consensus 577 ~Ey~~~gsL~~~-----------------------l~~~~~---------~~l~~~--~~~~i~---------------~ 607 (845)
|||+++..+.+. ||.-.. .+..+. ++..+. -
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999998654321 111100 011110 111111 1
Q ss_pred HHHHHHHHHhhcCC--------CceeeccCCCCcEEECCC-C-ceEEEeccccCCCC
Q 003139 608 GAARGLHYLHTGAA--------QSIIHRDVKTTNILLDDN-F-VAKVADFGLSKTGP 654 (845)
Q Consensus 608 ~ia~gL~yLH~~~~--------~~ivHrDik~~NILl~~~-~-~~kl~DFGla~~~~ 654 (845)
.+.+.+++|....+ ..+||+|+++.|||++.+ . ..-|.|++++....
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~Gd 259 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGN 259 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCC
Confidence 12334556643211 359999999999999853 3 35799999987643
No 470
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.85 E-value=2e-06 Score=96.81 Aligned_cols=182 Identities=19% Similarity=0.135 Sum_probs=130.2
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCC-cceEEEEEecCCcEEEEEEeccCC-C
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRH-LVSLIGYCDERSEMILVYEYMANG-P 584 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~g~~~~~~~~~lV~Ey~~~g-s 584 (845)
.+-+++|++++++|.+-.-.+....+.+... ....-++++|.+++||| .+..++-++.+...+++++++..+ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 3347899999999987432333334443322 34456899999999999 667777777777889999999877 2
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccc
Q 003139 585 LRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTA 664 (845)
Q Consensus 585 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 664 (845)
-..... .....+...+...+++.-++++++||+ ..=+|+| ||+..+ ...|..||+....... ......
T Consensus 322 ~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~---~~~~~t 389 (829)
T KOG0576|consen 322 SALEMT-VSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTR---TMKPRT 389 (829)
T ss_pred ccccCC-hhhHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCc---cccccc
Confidence 222111 111234445566778888899999998 3358988 777766 5889999999876433 223456
Q ss_pred cccCCCcCChhhhccCCCCchhHHHHHHHHHHHHHcCCCCC
Q 003139 665 VKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPAL 705 (845)
Q Consensus 665 ~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~Elltg~~p~ 705 (845)
..+++.++|||+.....+..+.|+|+.|+--.+|--|-+|-
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 77899999999999999999999999999777776666553
No 471
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.70 E-value=0.00035 Score=73.02 Aligned_cols=139 Identities=19% Similarity=0.244 Sum_probs=78.2
Q ss_pred eeeeeeceE-EEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCC---CcceEEEEEecC---CcEEEEEEec
Q 003139 508 LLLGVGGFG-RVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHR---HLVSLIGYCDER---SEMILVYEYM 580 (845)
Q Consensus 508 ~~LG~G~fg-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~g~~~~~---~~~~lV~Ey~ 580 (845)
+.|+.|+.. .||+. +..+++|..... ....++..|.+++..+... -+.+.++.+... ...+++||++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 357777766 58875 245777765432 2235788899999888532 344445444332 2348899999
Q ss_pred cCCCccccc------------------cCCCCC--CC-------------CHHHHH--HHH-------HHHHHH-HHH-H
Q 003139 581 ANGPLRSHL------------------YGTDLP--PL-------------SWKQRL--EIC-------IGAARG-LHY-L 616 (845)
Q Consensus 581 ~~gsL~~~l------------------~~~~~~--~l-------------~~~~~~--~i~-------~~ia~g-L~y-L 616 (845)
+|.++.... |.-... +. .|.... .+. .+.... ++. +
T Consensus 77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (235)
T cd05155 77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL 156 (235)
T ss_pred cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence 998875431 111000 00 121110 000 011111 111 1
Q ss_pred hh--cCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 617 HT--GAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 617 H~--~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
+. .....++|+|+.+.|||++++...-|.||+.+..
T Consensus 157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 11 1234589999999999999776667999998865
No 472
>PRK10593 hypothetical protein; Provisional
Probab=97.70 E-value=0.00083 Score=72.73 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=57.7
Q ss_pred CCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCC---CCcceEEEEEecC---CcEEEEE
Q 003139 504 FDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH---RHLVSLIGYCDER---SEMILVY 577 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~g~~~~~---~~~~lV~ 577 (845)
....+.||.|..+.||+....++ .+++|..+... ....|..|.+.|+.+.. -.+.+++++|... +..+|||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 34455799999999999876655 46666643211 22578889999998853 3678889888543 6689999
Q ss_pred EeccCCCc
Q 003139 578 EYMANGPL 585 (845)
Q Consensus 578 Ey~~~gsL 585 (845)
|+++++++
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99998765
No 473
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.70 E-value=0.00051 Score=69.24 Aligned_cols=129 Identities=22% Similarity=0.286 Sum_probs=89.6
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCCC----------------hHhHHHHHHHHHHHHhCC------CCCcceE
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRS----------------EQGIAEFRTEIEMLSKLR------HRHLVSL 563 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------H~niv~l 563 (845)
....||+|+.-.||. +.+....+||...... ....+++.+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 345899999999987 4455667888766554 223456667776666655 8899999
Q ss_pred EEEEecCCcEEEEEEeccCC------CccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEEC
Q 003139 564 IGYCDERSEMILVYEYMANG------PLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD 637 (845)
Q Consensus 564 ~g~~~~~~~~~lV~Ey~~~g------sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~ 637 (845)
+|+.+...-.-+|+|.+.+. +|.+++... .++. +..+.+. +-.+||-+ .+|+.+||+|+||++.
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~~~~L~---~f~~~l~~---~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-ELRQALD---EFKRYLLD---HHIVIRDLNPHNIVVQ 152 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HHHHHHH---HHHHHHHH---cCCeecCCCcccEEEE
Confidence 99999999999999987642 455555322 3444 3333333 34556666 7899999999999996
Q ss_pred CC---C-ceEEEe
Q 003139 638 DN---F-VAKVAD 646 (845)
Q Consensus 638 ~~---~-~~kl~D 646 (845)
.+ . .+.|+|
T Consensus 153 ~~~~~~~~lvlID 165 (199)
T PF10707_consen 153 RRDSGEFRLVLID 165 (199)
T ss_pred ecCCCceEEEEEe
Confidence 32 2 567776
No 474
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.62 E-value=0.00069 Score=70.64 Aligned_cols=140 Identities=16% Similarity=0.204 Sum_probs=82.2
Q ss_pred eeeeeeceEEEEEEEEcC--CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcce-EEEEEecCCcEEEEEEeccCCC
Q 003139 508 LLLGVGGFGRVYKGTLDD--GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVS-LIGYCDERSEMILVYEYMANGP 584 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~-l~g~~~~~~~~~lV~Ey~~~gs 584 (845)
+.|..|-...+|+....+ +..+++|......... -+-.+|+.++..+...++++ +++.+. -.+||||++|.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~-~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI-IDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce-ecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 457778888999998764 6788899765432221 22246888888886544444 443332 248999999877
Q ss_pred cccc-----------------ccCCC--C-------CCC-CHHHHHHHHH----------------------HHHHHHHH
Q 003139 585 LRSH-----------------LYGTD--L-------PPL-SWKQRLEICI----------------------GAARGLHY 615 (845)
Q Consensus 585 L~~~-----------------l~~~~--~-------~~l-~~~~~~~i~~----------------------~ia~gL~y 615 (845)
+... +|... . ... -|..+..+.. .+..-+..
T Consensus 79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 158 (235)
T cd05157 79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW 158 (235)
T ss_pred CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence 6321 11111 0 011 1222212111 11111111
Q ss_pred ----Hhh-cCCCceeeccCCCCcEEECC-CCceEEEeccccCC
Q 003139 616 ----LHT-GAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKT 652 (845)
Q Consensus 616 ----LH~-~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~ 652 (845)
+.. .....++|+|+.+.|||+++ +..+.|+||..|..
T Consensus 159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 111 12356999999999999998 57899999998865
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.57 E-value=0.00021 Score=86.25 Aligned_cols=199 Identities=21% Similarity=0.210 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHhCCCCCcceEEEEEecCCcEE----EEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Q 003139 543 AEFRTEIEMLSKLRHRHLVSLIGYCDERSEMI----LVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHT 618 (845)
Q Consensus 543 ~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~----lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 618 (845)
....-|++.+.++.|+|++.+.+|-.+....- +..|++..-++...+... ..++....+.+..++.+||.|+|+
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v--~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV--GSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc--cccCHHHHHHHHHHHhhhHHHHHH
Confidence 34445788888999999999999986554333 445778777777777433 467888888999999999999998
Q ss_pred cCCCceeeccCCCC---cEEECCCCceEEE--eccccCCCCCCCCcccccccccCCCcCChhhhccCCCCc--hhHHHHH
Q 003139 619 GAAQSIIHRDVKTT---NILLDDNFVAKVA--DFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTE--KSDVYSF 691 (845)
Q Consensus 619 ~~~~~ivHrDik~~---NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--ksDV~S~ 691 (845)
....|.-+..+ +--.+..+...++ ||+..+..+..... .....+..+.+||......++. +.|+|++
T Consensus 305 ---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~---~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 305 ---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS---FSDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred ---hccceeEEecccccccccCccceeecchhhhcccccCCCcccc---hhhcCccccccccccccccchhhhhhHHHHH
Confidence 45555555444 4445666777777 88888765443222 2223445678888877665544 4799999
Q ss_pred HHHHHHHHcCCCCCCCCCCcccccHHHHHHHHhhcCchhhhhccccCCCCCHHHHHHHHHHHHHhhhhCCCCCCCHHHHH
Q 003139 692 GVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVL 771 (845)
Q Consensus 692 Gvvl~Elltg~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~l~~~cl~~~p~~RPs~~~vl 771 (845)
|.++..+..|..+-.... ....+++. .....+.....+|+..++++|++..+++
T Consensus 379 gll~~~~~~~~~i~~~~~------------------~~~~~l~~--------~~~~~~~d~~~~~~~~~~~~Rl~~~~ll 432 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSA------------------VPVSLLDV--------LSTSELLDALPKCLDEDSEERLSALELL 432 (1351)
T ss_pred HHHHhhhhhcCccccccc------------------chhhhhcc--------ccchhhhhhhhhhcchhhhhccchhhhh
Confidence 999999998875432211 11111111 1111456778899999999999999998
Q ss_pred HHHH
Q 003139 772 WNLE 775 (845)
Q Consensus 772 ~~L~ 775 (845)
.+.-
T Consensus 433 ~~~f 436 (1351)
T KOG1035|consen 433 THPF 436 (1351)
T ss_pred hchh
Confidence 7643
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.55 E-value=0.00057 Score=72.41 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=80.0
Q ss_pred eeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcc-eEEEEEecCCcEEEEEEeccCCCcccc
Q 003139 510 LGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLV-SLIGYCDERSEMILVYEYMANGPLRSH 588 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~gsL~~~ 588 (845)
+..|-...+|+... ++..+++|..........-+..+|.++++.+....++ ++++.+. -.+||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence 45677788998874 4678888875443222111346788999988654443 3444432 3689999998776532
Q ss_pred -----------------ccCCC--CCCCCHHHHH-HHHHH---------HHHHHHHHhh-----cCCCceeeccCCCCcE
Q 003139 589 -----------------LYGTD--LPPLSWKQRL-EICIG---------AARGLHYLHT-----GAAQSIIHRDVKTTNI 634 (845)
Q Consensus 589 -----------------l~~~~--~~~l~~~~~~-~i~~~---------ia~gL~yLH~-----~~~~~ivHrDik~~NI 634 (845)
||... ..+++...++ ....+ +.+.++.+-. .....++|+|+.|.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 11111 1122222111 11111 1111222211 1124589999999999
Q ss_pred EECCCCceEEEeccccCC
Q 003139 635 LLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 635 Ll~~~~~~kl~DFGla~~ 652 (845)
++++++ ++|+||+.+..
T Consensus 159 l~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEeCCC-CEEEeccccCc
Confidence 999876 78999998865
No 477
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.54 E-value=0.00048 Score=66.64 Aligned_cols=128 Identities=23% Similarity=0.268 Sum_probs=86.9
Q ss_pred cceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcceEEEEEecCCcEEEEEEeccCCCc
Q 003139 506 ESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 506 ~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~g~~~~~~~~~lV~Ey~~~gsL 585 (845)
..+.|++|.+|.||+|.+. |..+|+|.....+. ...+..|.++|..+.-.++.+=+-.+ ++-.+.|||+.|-+|
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcch
Confidence 3457999999999999998 55888887655443 36788899999999877776544333 223455999988787
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCC-C-CcEEECCCCceEEEeccccCC
Q 003139 586 RSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVK-T-TNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 586 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik-~-~NILl~~~~~~kl~DFGla~~ 652 (845)
.+.-... +-++++. +++.---|.. .+|-|+.|. | .||++.+ ..+.|+||.-|..
T Consensus 100 ~~~~~~~-----~rk~l~~----vlE~a~~LD~---~GI~H~El~~~~k~vlv~~-~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIGG-----DRKHLLR----VLEKAYKLDR---LGIEHGELSRPWKNVLVND-RDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcc-----cHHHHHH----HHHHHHHHHH---hccchhhhcCCceeEEecC-CcEEEEEccchhh
Confidence 7654221 2233333 3333333443 688888886 4 4555554 4999999998874
No 478
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.47 E-value=0.0011 Score=66.31 Aligned_cols=125 Identities=28% Similarity=0.371 Sum_probs=90.7
Q ss_pred cCCCcceeeeeece-EEEEEEEEcCCcEEEEEEcCC---CC---------h---------HhHHHHHHHHHHHHhCC---
Q 003139 502 NKFDESLLLGVGGF-GRVYKGTLDDGTKVAVKRGNP---RS---------E---------QGIAEFRTEIEMLSKLR--- 556 (845)
Q Consensus 502 ~~f~~~~~LG~G~f-g~Vy~~~~~~g~~vavK~~~~---~~---------~---------~~~~~~~~E~~~l~~l~--- 556 (845)
..++..+.||.|.- |.|||++.. |+.+|+|.+.. .. . .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888889999999 999999987 78999998211 10 0 12245888999888885
Q ss_pred CCCc--ceEEEEEecC------------------CcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 003139 557 HRHL--VSLIGYCDER------------------SEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYL 616 (845)
Q Consensus 557 H~ni--v~l~g~~~~~------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL 616 (845)
+.++ |+.+||..-. ....||.||++... .+. .+-+.+|.+-|..+
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~ 180 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKIL 180 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHH
Confidence 4566 8999987221 12357788775432 122 33456677778889
Q ss_pred hhcCCCceeeccCCCCcEEECCCCceEEEecccc
Q 003139 617 HTGAAQSIIHRDVKTTNILLDDNFVAKVADFGLS 650 (845)
Q Consensus 617 H~~~~~~ivHrDik~~NILl~~~~~~kl~DFGla 650 (845)
|. .+|+-+|+++.|.. .-||+|||.+
T Consensus 181 ~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 181 HK---LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HH---CCeeeccCcccccc-----CCEEEecccC
Confidence 98 99999999999985 5689999864
No 479
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.43 E-value=0.0017 Score=70.27 Aligned_cols=142 Identities=21% Similarity=0.184 Sum_probs=87.1
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCC--cceEEEE------EecCCcEEEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRH--LVSLIGY------CDERSEMILVYE 578 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~------~~~~~~~~lV~E 578 (845)
.+.|..|....+|+....+ ..+++|+..... .++...|++++..+++.+ +.+++.. ....+..++|+|
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEKVS---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCCCC---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 4567778778999987654 468888876422 345666888888775433 4454432 123345689999
Q ss_pred eccCCCcccc--------------ccC--C--C-----CCCCCHHHHHH----------HHHHHHHHHHHHhh----cCC
Q 003139 579 YMANGPLRSH--------------LYG--T--D-----LPPLSWKQRLE----------ICIGAARGLHYLHT----GAA 621 (845)
Q Consensus 579 y~~~gsL~~~--------------l~~--~--~-----~~~l~~~~~~~----------i~~~ia~gL~yLH~----~~~ 621 (845)
|++|..+... +|. . . .....|..... ....+...+.++.+ ...
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 9998776431 010 0 0 01123332210 11123334445442 234
Q ss_pred CceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 622 QSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 622 ~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
.+++|+|+.|.|||++++....|.||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 5799999999999999987789999998754
No 480
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.38 E-value=0.0053 Score=68.62 Aligned_cols=75 Identities=21% Similarity=0.272 Sum_probs=53.6
Q ss_pred eeeeeeceEEEEEEEEcCC-cEEEEEEcCCC------C-hHhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCcEEEE
Q 003139 508 LLLGVGGFGRVYKGTLDDG-TKVAVKRGNPR------S-EQGIAEFRTEIEMLSKLR---HRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g-~~vavK~~~~~------~-~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV 576 (845)
+.||.|.+..||++...+| +.++||.-.+. + ....+++..|.+.|..+. ..++.+++.+ +.+..++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 3689999999999998877 48999974321 1 223566778888888763 2456667766 34567899
Q ss_pred EEeccCCC
Q 003139 577 YEYMANGP 584 (845)
Q Consensus 577 ~Ey~~~gs 584 (845)
|||+++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.26 E-value=0.002 Score=70.02 Aligned_cols=140 Identities=24% Similarity=0.313 Sum_probs=84.6
Q ss_pred eeeeeeceEEEEEEEEcC-------CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcc-eEEEEEecCCcEEEEEEe
Q 003139 508 LLLGVGGFGRVYKGTLDD-------GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLV-SLIGYCDERSEMILVYEY 579 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~-------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey 579 (845)
+.|..|-...+|+....+ ++.+++|....... ...+..+|.+++..+...++. ++++++.. .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 356667777899988765 47889998654432 223456788888888544444 45555532 368999
Q ss_pred ccCCCcccc-----------------ccCCCCC---------CCCHHHHHH--------------------------HHH
Q 003139 580 MANGPLRSH-----------------LYGTDLP---------PLSWKQRLE--------------------------ICI 607 (845)
Q Consensus 580 ~~~gsL~~~-----------------l~~~~~~---------~l~~~~~~~--------------------------i~~ 607 (845)
++|..+... +|..... +.-|..+.+ +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 998876531 1111110 111111111 111
Q ss_pred HHHHHHHHHhh------cCCCceeeccCCCCcEEECCC----CceEEEeccccCC
Q 003139 608 GAARGLHYLHT------GAAQSIIHRDVKTTNILLDDN----FVAKVADFGLSKT 652 (845)
Q Consensus 608 ~ia~gL~yLH~------~~~~~ivHrDik~~NILl~~~----~~~kl~DFGla~~ 652 (845)
.+.+-++.|.. .....++|+|+.+.|||++++ +.++++||..|..
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 22223334432 234678999999999999985 8899999998864
No 482
>PRK05231 homoserine kinase; Provisional
Probab=97.23 E-value=0.0061 Score=66.76 Aligned_cols=141 Identities=14% Similarity=0.184 Sum_probs=78.5
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCC--cceEEE------EEecCCcEEEEEEe
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRH--LVSLIG------YCDERSEMILVYEY 579 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g------~~~~~~~~~lV~Ey 579 (845)
+.|+.|....+|+....+| .+++|+...... ++...|++++..|...+ +.+.+. +....+..++++||
T Consensus 28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQG-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred chhccccccceEEEEeCCC-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 4566777789999887655 688887652222 23334555555543222 333332 12234567899999
Q ss_pred ccCCCcccc--------------ccCC--C-------CCCCCH-HHHHHHH------------HH-HHHHHHHHhhc---
Q 003139 580 MANGPLRSH--------------LYGT--D-------LPPLSW-KQRLEIC------------IG-AARGLHYLHTG--- 619 (845)
Q Consensus 580 ~~~gsL~~~--------------l~~~--~-------~~~l~~-~~~~~i~------------~~-ia~gL~yLH~~--- 619 (845)
++|..+... +|.. . ...+.| .+...-. .+ +...++.+...
T Consensus 104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 183 (319)
T PRK05231 104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP 183 (319)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence 998765321 1110 0 011222 2221111 11 11122333211
Q ss_pred -CCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 620 -AAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 620 -~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
...++||+|+++.|||++++...-|+||+.+..
T Consensus 184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 346899999999999999776668999998865
No 483
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.94 E-value=0.012 Score=63.99 Aligned_cols=143 Identities=18% Similarity=0.183 Sum_probs=84.0
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCC--cceEEEEE------ecCCcEEEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRH--LVSLIGYC------DERSEMILVYE 578 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~g~~------~~~~~~~lV~E 578 (845)
.+.++.|....+|+...++| .+++|+...... .++...|.+++..|.... +.+++... ...+..++++|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e 103 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE 103 (307)
T ss_pred ccccCCccccceEEEEeCCC-cEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence 34566777789999876655 577887654321 234455677777664322 34444321 22456789999
Q ss_pred eccCCCcccc--------------ccC--CC--C------CCCCHHHHHH------------HHHHHHHHHHHHhh----
Q 003139 579 YMANGPLRSH--------------LYG--TD--L------PPLSWKQRLE------------ICIGAARGLHYLHT---- 618 (845)
Q Consensus 579 y~~~gsL~~~--------------l~~--~~--~------~~l~~~~~~~------------i~~~ia~gL~yLH~---- 618 (845)
|++|..+... +|. .. . ..-.|..... ....+.+.++++..
T Consensus 104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~ 183 (307)
T TIGR00938 104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR 183 (307)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence 9998665321 111 00 0 0112221111 11123345555542
Q ss_pred cCCCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 619 GAAQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 619 ~~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
....+++|+|+++.||++++++...|.||+.+..
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred cCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 2357899999999999999987778999998754
No 484
>PLN02236 choline kinase
Probab=96.82 E-value=0.0097 Score=65.86 Aligned_cols=139 Identities=18% Similarity=0.217 Sum_probs=83.3
Q ss_pred eeeeeceEEEEEEEEcC-----CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcc-eEEEEEecCCcEEEEEEeccC
Q 003139 509 LLGVGGFGRVYKGTLDD-----GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLV-SLIGYCDERSEMILVYEYMAN 582 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~ 582 (845)
.|-.|-.-.+|+....+ ++.+++|...........+ .+|..+++.+...++. ++++.+.. + .|+||+++
T Consensus 43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~g 117 (344)
T PLN02236 43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDR-DDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIHA 117 (344)
T ss_pred EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeech-HHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeCC
Confidence 34456777899987542 3678899876554333333 6789999888655554 45555433 2 58999988
Q ss_pred CCcccc-----------------ccCCCC----CCCCHHHHHHHHHHH-----------------HHHHHHHh----h-c
Q 003139 583 GPLRSH-----------------LYGTDL----PPLSWKQRLEICIGA-----------------ARGLHYLH----T-G 619 (845)
Q Consensus 583 gsL~~~-----------------l~~~~~----~~l~~~~~~~i~~~i-----------------a~gL~yLH----~-~ 619 (845)
.+|... +|+... ....|.++.++..++ ...+..|. . .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 776421 122110 112233333333221 11122222 1 1
Q ss_pred CCCceeeccCCCCcEEECC-CCceEEEeccccCC
Q 003139 620 AAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKT 652 (845)
Q Consensus 620 ~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~ 652 (845)
....++|+|+++.|||+++ ++.++++||..+..
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 2346899999999999986 47899999998864
No 485
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.78 E-value=0.0023 Score=67.52 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=92.0
Q ss_pred CCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCC--------------------ChHhH--HHHHHHHHHHHhCCC--CC
Q 003139 504 FDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPR--------------------SEQGI--AEFRTEIEMLSKLRH--RH 559 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~--------------------~~~~~--~~~~~E~~~l~~l~H--~n 559 (845)
+...+.||-|.-+.||.+...+|++.++|..... +...+ -...+|...|+.|.. --
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 4556789999999999999999999998832111 00011 124568888888853 23
Q ss_pred cceEEEEEecCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCC
Q 003139 560 LVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDN 639 (845)
Q Consensus 560 iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~ 639 (845)
+.+.+++ +..++|||++.+-.|...-+-. +..++.. .+..-+.-|-. +|+||+|..-=||+++++
T Consensus 174 VPkpiD~----~RH~Vvmelv~g~Pl~~v~~v~-----d~~~ly~---~lm~~Iv~la~---~GlIHgDFNEFNimv~dd 238 (465)
T KOG2268|consen 174 VPKPIDH----NRHCVVMELVDGYPLRQVRHVE-----DPPTLYD---DLMGLIVRLAN---HGLIHGDFNEFNIMVKDD 238 (465)
T ss_pred CCCcccc----cceeeHHHhhcccceeeeeecC-----ChHHHHH---HHHHHHHHHHH---cCceecccchheeEEecC
Confidence 4445543 4678999999998887764322 2233332 22223444444 899999999999999999
Q ss_pred CceEEEeccccCC
Q 003139 640 FVAKVADFGLSKT 652 (845)
Q Consensus 640 ~~~kl~DFGla~~ 652 (845)
..++++||--+..
T Consensus 239 ~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 239 DKIVVIDFPQMVS 251 (465)
T ss_pred CCEEEeechHhhc
Confidence 9999999976644
No 486
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.67 E-value=0.029 Score=60.64 Aligned_cols=131 Identities=18% Similarity=0.263 Sum_probs=82.1
Q ss_pred EEEEEEEcCCcEEEEEEcC-CCChHhHHHHHHHHHHHHhCCC--CCcceEEEEEecCC--cEEEEEEeccCCCccccccC
Q 003139 517 RVYKGTLDDGTKVAVKRGN-PRSEQGIAEFRTEIEMLSKLRH--RHLVSLIGYCDERS--EMILVYEYMANGPLRSHLYG 591 (845)
Q Consensus 517 ~Vy~~~~~~g~~vavK~~~-~~~~~~~~~~~~E~~~l~~l~H--~niv~l~g~~~~~~--~~~lV~Ey~~~gsL~~~l~~ 591 (845)
.+|..... ++.+++++-. ...........+|.++|+.+.- --+-..+++|.++. ..+.||+|++|..+...+..
T Consensus 40 ~t~~~~~~-~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~ 118 (321)
T COG3173 40 DTFRLGDT-GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP 118 (321)
T ss_pred ceEEEecC-CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCc
Confidence 34444433 7778888321 1223334555678888887753 23445677786665 77999999998655544422
Q ss_pred CCCCCCCHHHHHHHH-HHHHHHHHHHhh--------------------------------------------------c-
Q 003139 592 TDLPPLSWKQRLEIC-IGAARGLHYLHT--------------------------------------------------G- 619 (845)
Q Consensus 592 ~~~~~l~~~~~~~i~-~~ia~gL~yLH~--------------------------------------------------~- 619 (845)
... . .+++ ..+++.|.-||+ .
T Consensus 119 ~~~---~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~ 191 (321)
T COG3173 119 ESL---G----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANR 191 (321)
T ss_pred ccc---h----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcC
Confidence 111 0 1111 244444555552 1
Q ss_pred ----CCCceeeccCCCCcEEECCCCceEEEeccccCCCCC
Q 003139 620 ----AAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPA 655 (845)
Q Consensus 620 ----~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~ 655 (845)
....++|+|+++.||+++.+..+-|.||+++.....
T Consensus 192 p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 192 PPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred CCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 134699999999999999988899999999987443
No 487
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.59 E-value=0.031 Score=59.79 Aligned_cols=137 Identities=15% Similarity=0.070 Sum_probs=75.5
Q ss_pred eeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCC--CC-cceEEEEEecCCcEEEEEEeccCCCcc
Q 003139 510 LGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRH--RH-LVSLIGYCDERSEMILVYEYMANGPLR 586 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~n-iv~l~g~~~~~~~~~lV~Ey~~~gsL~ 586 (845)
.++|--..|+.....+|..+++|.-. .........+|.++|+.++. +- +.+++..+ .-+++|++++|..+.
T Consensus 19 ~~~g~~~~v~~i~~~~g~~~VlR~p~--~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~----~~~~~y~~i~G~p~~ 92 (276)
T cd05152 19 NESGLDFQVVFAKDTDGVPWVLRIPR--RPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT----PELIAYPKLPGVPAA 92 (276)
T ss_pred cCCcceeEEEEEEcCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec----CceEEEeccCCCccc
Confidence 34444456666544568889999864 22334567889999998853 21 12222222 235678888776553
Q ss_pred ccccCCCC---CCCCHHHHHHHHHHHHHHHHHHhh---------------------------------------------
Q 003139 587 SHLYGTDL---PPLSWKQRLEICIGAARGLHYLHT--------------------------------------------- 618 (845)
Q Consensus 587 ~~l~~~~~---~~l~~~~~~~i~~~ia~gL~yLH~--------------------------------------------- 618 (845)
..-..... ..........++.++++.|.-||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 172 (276)
T cd05152 93 TIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQDEAEAAGIPVETPEEVRQTMADRMDRVKEEFGVSEALWNRWQ 172 (276)
T ss_pred ccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCChhhccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 21000000 000001112233344444444441
Q ss_pred ---------cCCCceeeccCCCCcEEECCCCc-eEEEeccccCC
Q 003139 619 ---------GAAQSIIHRDVKTTNILLDDNFV-AKVADFGLSKT 652 (845)
Q Consensus 619 ---------~~~~~ivHrDik~~NILl~~~~~-~kl~DFGla~~ 652 (845)
.....++|+|+++.|||+++++. .-|.||+.+..
T Consensus 173 ~~L~~~~~~~~~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 173 AWLDDDSYWPRHTVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred HHHhhcCCCCCCCeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 01234899999999999997554 56999999876
No 488
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.54 E-value=0.00041 Score=85.36 Aligned_cols=162 Identities=15% Similarity=0.023 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHhCCCCCcceEEEEE--ecCCcEEEEEEeccCCCccccccCC--CCCCCCHHHHHHHHHHHHHHHHHHh
Q 003139 542 IAEFRTEIEMLSKLRHRHLVSLIGYC--DERSEMILVYEYMANGPLRSHLYGT--DLPPLSWKQRLEICIGAARGLHYLH 617 (845)
Q Consensus 542 ~~~~~~E~~~l~~l~H~niv~l~g~~--~~~~~~~lV~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH 617 (845)
.+-.+.|...+++..|+++.....-. .+..+.+.+++|+..|.+.+.|-+. +.++++..-+...-.+......-+|
T Consensus 1273 kemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~l 1352 (2724)
T KOG1826|consen 1273 KEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVIL 1352 (2724)
T ss_pred HHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhh
Confidence 34445566666777899877655444 2345678999999999998887543 2334444444433334355555555
Q ss_pred hc--CCCceeeccCCCCcEEECCCCceEEEeccccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHH
Q 003139 618 TG--AAQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL 695 (845)
Q Consensus 618 ~~--~~~~ivHrDik~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl 695 (845)
.. ...--+|+++|+-|.+|..+.++|++++|+.++..+ .........+++-|+.|+....-.++.++|+|..|+.+
T Consensus 1353 s~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp--~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~l 1430 (2724)
T KOG1826|consen 1353 SLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP--VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSL 1430 (2724)
T ss_pred hcccCCccchhhhhhhhccceecCCcccccccccccccCc--hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 42 224479999999999999999999999999984221 22223345677889999999999999999999999999
Q ss_pred HHHHcCCCCC
Q 003139 696 MEVLCTRPAL 705 (845)
Q Consensus 696 ~Elltg~~p~ 705 (845)
++.-.|..+|
T Consensus 1431 y~rs~~n~~f 1440 (2724)
T KOG1826|consen 1431 YLRSDGNAYF 1440 (2724)
T ss_pred HHHhcccHHH
Confidence 9988777654
No 489
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.26 E-value=0.026 Score=60.54 Aligned_cols=141 Identities=22% Similarity=0.277 Sum_probs=73.5
Q ss_pred CCcceeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCcEEEEEEec
Q 003139 504 FDESLLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR---HRHLVSLIGYCDERSEMILVYEYM 580 (845)
Q Consensus 504 f~~~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV~Ey~ 580 (845)
.+..+.|+.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+.+.+++....+..+||+||+
T Consensus 19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 3445568889999999987 567889999855 233356788888888883 446778899887777789999999
Q ss_pred cCCCcc-----------ccccC-CCCC-------------------CCCHHH-----HHHHHHHHH--------------
Q 003139 581 ANGPLR-----------SHLYG-TDLP-------------------PLSWKQ-----RLEICIGAA-------------- 610 (845)
Q Consensus 581 ~~gsL~-----------~~l~~-~~~~-------------------~l~~~~-----~~~i~~~ia-------------- 610 (845)
+.+... ..||. ...+ .-+|.+ |+.-..+.+
T Consensus 95 ~~~~~~~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~~~~~~~l~ 174 (288)
T PF03881_consen 95 EMGSPSPPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGLDAELERLV 174 (288)
T ss_dssp ------CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS-CHHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH
Confidence 877111 01122 1100 123432 222111111
Q ss_pred HHH-HHHhhc-CCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 611 RGL-HYLHTG-AAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 611 ~gL-~yLH~~-~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
+.+ ..|+.. ..+.++|+||.+.|++.+.++.+.|.|=.
T Consensus 175 ~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa 214 (288)
T PF03881_consen 175 ERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPA 214 (288)
T ss_dssp HHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S--
T ss_pred HHHHHHhcCCCCCceeeEcCccccceeecCCCCceeeccc
Confidence 111 122211 23569999999999999999889998854
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.05 E-value=0.088 Score=57.38 Aligned_cols=32 Identities=13% Similarity=0.236 Sum_probs=29.0
Q ss_pred CCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 621 AQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 621 ~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
..+++|+|+.++|||+++++.+.++||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45799999999999999999999999998865
No 491
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.98 E-value=0.044 Score=60.33 Aligned_cols=139 Identities=17% Similarity=0.250 Sum_probs=80.4
Q ss_pred eeeeeceEEEEEEEEcC----CcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCCcc-eEEEEEecCCcEEEEEEeccCC
Q 003139 509 LLGVGGFGRVYKGTLDD----GTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRHLV-SLIGYCDERSEMILVYEYMANG 583 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~g~~~~~~~~~lV~Ey~~~g 583 (845)
.|..|-...+|+....+ +..+++|.........+. -.+|..+++.+..-++- ++++++. .+ +|.+|+++.
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~Id-R~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g~ 95 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVID-RERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINAR 95 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEec-hHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcCC
Confidence 34446667888887543 237888876554332222 25788899888766664 4565553 22 589999877
Q ss_pred Ccccc-----------------ccCCCC----CCCCHHHHHHHHHHH----------------------HHHHHHHhh--
Q 003139 584 PLRSH-----------------LYGTDL----PPLSWKQRLEICIGA----------------------ARGLHYLHT-- 618 (845)
Q Consensus 584 sL~~~-----------------l~~~~~----~~l~~~~~~~i~~~i----------------------a~gL~yLH~-- 618 (845)
.|... ||.... .+--|..+.++..++ ..-+..+..
T Consensus 96 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 175 (330)
T PLN02421 96 TLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEIT 175 (330)
T ss_pred CCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHHh
Confidence 66321 111110 011233333322221 111222111
Q ss_pred ---cCCCceeeccCCCCcEEECC-CCceEEEeccccCC
Q 003139 619 ---GAAQSIIHRDVKTTNILLDD-NFVAKVADFGLSKT 652 (845)
Q Consensus 619 ---~~~~~ivHrDik~~NILl~~-~~~~kl~DFGla~~ 652 (845)
..+.-++|+|+.+.|||+++ ++.++++||..|..
T Consensus 176 ~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 176 DSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred ccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11234799999999999974 57899999998854
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.54 E-value=0.03 Score=57.34 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=21.9
Q ss_pred CceeeccCCCCcEEE-CCCCceEEEeccccCC
Q 003139 622 QSIIHRDVKTTNILL-DDNFVAKVADFGLSKT 652 (845)
Q Consensus 622 ~~ivHrDik~~NILl-~~~~~~kl~DFGla~~ 652 (845)
.-++|+||.+.|||+ +.++.++++||..|..
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 457899999999999 8899999999998754
No 493
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.46 E-value=0.086 Score=57.87 Aligned_cols=73 Identities=22% Similarity=0.212 Sum_probs=47.2
Q ss_pred eeeeeceEEEEEEEEcCC-cEEEEEEcCC-------CChHhHHHHHHHHHHHHhCC--CCCcceEEEEEecCCcEEEEEE
Q 003139 509 LLGVGGFGRVYKGTLDDG-TKVAVKRGNP-------RSEQGIAEFRTEIEMLSKLR--HRHLVSLIGYCDERSEMILVYE 578 (845)
Q Consensus 509 ~LG~G~fg~Vy~~~~~~g-~~vavK~~~~-------~~~~~~~~~~~E~~~l~~l~--H~niv~l~g~~~~~~~~~lV~E 578 (845)
.||.|...-||++...+| +.++||.-.+ .-+-..++..-|.+.|+... -|..++-+- +.+.+...+|||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy-~~D~e~~~~vME 80 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF-HFDTEMAVTVME 80 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE-EEccccceehHh
Confidence 478999999999998754 5899995321 11333455566777776653 344444332 234556679999
Q ss_pred eccC
Q 003139 579 YMAN 582 (845)
Q Consensus 579 y~~~ 582 (845)
+++.
T Consensus 81 dL~~ 84 (370)
T TIGR01767 81 DLSH 84 (370)
T ss_pred hCcc
Confidence 9865
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.46 E-value=0.048 Score=58.85 Aligned_cols=110 Identities=20% Similarity=0.210 Sum_probs=73.1
Q ss_pred cCCcEEEEEEeccCCCccccccCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCcEEECCCCceEEEecc
Q 003139 569 ERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFVAKVADFG 648 (845)
Q Consensus 569 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDik~~NILl~~~~~~kl~DFG 648 (845)
+....|++|++. +++|... .-..|.+.+.|+.+.+.-+.-|.. ..++-|||+.-.||||+ +|++-|+||-
T Consensus 297 e~~y~yl~~kdh-gt~is~i------k~~~~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfk 366 (488)
T COG5072 297 ETLYLYLHFKDH-GTPISII------KADRSEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFK 366 (488)
T ss_pred CceEEEEEEecC-Cceeeee------ecccHHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEee
Confidence 334456777765 4555432 235789999999998888887765 46789999999999999 9999999999
Q ss_pred ccCCCCCCCCcccccccccCCCcCChhhhccCCCCchhHHHHHHHHHH
Q 003139 649 LSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLM 696 (845)
Q Consensus 649 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~ksDV~S~Gvvl~ 696 (845)
++|.... +.... -...-.|-.+.+. -+.+=|||-+--.|.
T Consensus 367 lsRl~~~--q~~is-----y~rldhp~lF~G~-dd~QFeIYrlMr~l~ 406 (488)
T COG5072 367 LSRLSYS--QGIIS-----YNRLDHPDLFNGV-DDYQFEIYRLMRRLL 406 (488)
T ss_pred eeecccC--Cceee-----ccccCchhhhcCc-cceeeeHHHHHHHHh
Confidence 9996322 11111 1122344445533 366667776544443
No 495
>PLN02756 S-methyl-5-thioribose kinase
Probab=95.41 E-value=0.21 Score=55.92 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=49.5
Q ss_pred ceeeeeeceEEEEEEEEcCCcEEEEEEcCCC----Ch---HhHHHHHHHHHHHHhCC---CCCcceEEEEEecCCcEEEE
Q 003139 507 SLLLGVGGFGRVYKGTLDDGTKVAVKRGNPR----SE---QGIAEFRTEIEMLSKLR---HRHLVSLIGYCDERSEMILV 576 (845)
Q Consensus 507 ~~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~----~~---~~~~~~~~E~~~l~~l~---H~niv~l~g~~~~~~~~~lV 576 (845)
.+.||.|....||+.... +..++||+-.+. +. ....+-..|.+.|+.+. ..++.+++.+|. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 346899999999998764 557999975421 11 12334445566666553 357788888887 446889
Q ss_pred EEeccC
Q 003139 577 YEYMAN 582 (845)
Q Consensus 577 ~Ey~~~ 582 (845)
||++++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999976
No 496
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.29 E-value=0.01 Score=66.43 Aligned_cols=47 Identities=19% Similarity=0.325 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhCCCCCcceEEEEEecCC-cEEEEEEeccCCCccccccC
Q 003139 544 EFRTEIEMLSKLRHRHLVSLIGYCDERS-EMILVYEYMANGPLRSHLYG 591 (845)
Q Consensus 544 ~~~~E~~~l~~l~H~niv~l~g~~~~~~-~~~lV~Ey~~~gsL~~~l~~ 591 (845)
+.+-...+++.+.|+|+.+.+.+..... ...+|+|++ +.||.+.+..
T Consensus 28 ~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~ 75 (725)
T KOG1093|consen 28 QILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKT 75 (725)
T ss_pred HHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHh
Confidence 4456677889999999999998875543 367889998 6788887743
No 497
>PRK06148 hypothetical protein; Provisional
Probab=95.17 E-value=0.21 Score=63.30 Aligned_cols=141 Identities=22% Similarity=0.304 Sum_probs=79.5
Q ss_pred eeeeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCC--CCC--cceEEE--------EEec-CC--c
Q 003139 508 LLLGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLR--HRH--LVSLIG--------YCDE-RS--E 572 (845)
Q Consensus 508 ~~LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--H~n--iv~l~g--------~~~~-~~--~ 572 (845)
+.|+ |..-.+|+....+|..+++|+.+..... .....|.+.|..|. ++. +.+++- .... .+ .
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~--~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEPR--VESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccch--hHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 3454 4457789988888889999998765322 23334555555442 122 222221 1111 22 4
Q ss_pred EEEEEEeccCCCcccccc---------------------CC----CCCCCCHHH-----------------HHHHHHHHH
Q 003139 573 MILVYEYMANGPLRSHLY---------------------GT----DLPPLSWKQ-----------------RLEICIGAA 610 (845)
Q Consensus 573 ~~lV~Ey~~~gsL~~~l~---------------------~~----~~~~l~~~~-----------------~~~i~~~ia 610 (845)
.+-+++|++|..|.+... .- ....+.|.. ...++.++.
T Consensus 108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~ 187 (1013)
T PRK06148 108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL 187 (1013)
T ss_pred EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence 567899999987754110 00 012234432 112222333
Q ss_pred HHHH-----HHhhcCCCceeeccCCCCcEEECCCC--ceE-EEeccccCC
Q 003139 611 RGLH-----YLHTGAAQSIIHRDVKTTNILLDDNF--VAK-VADFGLSKT 652 (845)
Q Consensus 611 ~gL~-----yLH~~~~~~ivHrDik~~NILl~~~~--~~k-l~DFGla~~ 652 (845)
...+ .| .....++||+|+.+.|||++.+. ++. |+|||-+..
T Consensus 188 ~~~~~~v~p~l-~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 188 ARFERNVAPRL-AALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHH-hcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 2222 12 22456799999999999999775 454 999998865
No 498
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.13 E-value=0.41 Score=52.36 Aligned_cols=139 Identities=23% Similarity=0.280 Sum_probs=82.1
Q ss_pred eeeeceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCCC---cce---EEE----EEecCCcEEEEEEe
Q 003139 510 LGVGGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHRH---LVS---LIG----YCDERSEMILVYEY 579 (845)
Q Consensus 510 LG~G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n---iv~---l~g----~~~~~~~~~lV~Ey 579 (845)
|.+ .-..+|+....+|.. ++|..... ....+...|++.|..+.-.+ -++ +=| ........+-|++|
T Consensus 34 l~s-~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~ 109 (331)
T COG2334 34 LNS-EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEY 109 (331)
T ss_pred ccc-ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEe
Confidence 444 556789988877766 88877665 22345556777777663221 122 112 11222477889999
Q ss_pred ccCCCccc-cc--------------c--CCC--------CCCCCHHH-------------HHHHHHHHHHHHHHHhh---
Q 003139 580 MANGPLRS-HL--------------Y--GTD--------LPPLSWKQ-------------RLEICIGAARGLHYLHT--- 618 (845)
Q Consensus 580 ~~~gsL~~-~l--------------~--~~~--------~~~l~~~~-------------~~~i~~~ia~gL~yLH~--- 618 (845)
++|..+.. .. + ..+ .....|.. ......++...+..+.+
T Consensus 110 l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~ 189 (331)
T COG2334 110 LPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLP 189 (331)
T ss_pred cCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhch
Confidence 99988883 11 0 000 11234431 01133334444444443
Q ss_pred -cCCCc---eeeccCCCCcEEECCCCc-eEEEeccccCC
Q 003139 619 -GAAQS---IIHRDVKTTNILLDDNFV-AKVADFGLSKT 652 (845)
Q Consensus 619 -~~~~~---ivHrDik~~NILl~~~~~-~kl~DFGla~~ 652 (845)
..... +||+|+.|.|||++.+.. +.+.||+-+..
T Consensus 190 ~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~ 228 (331)
T COG2334 190 AHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY 228 (331)
T ss_pred hhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence 12223 999999999999998875 89999998764
No 499
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.04 E-value=0.65 Score=50.99 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=76.0
Q ss_pred eceEEEEEEEEcCCcEEEEEEcCCCChHhHHHHHHHHHHHHhCCCC--CcceEE---E--EEecCCcEEEEEEeccCCCc
Q 003139 513 GGFGRVYKGTLDDGTKVAVKRGNPRSEQGIAEFRTEIEMLSKLRHR--HLVSLI---G--YCDERSEMILVYEYMANGPL 585 (845)
Q Consensus 513 G~fg~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~---g--~~~~~~~~~lV~Ey~~~gsL 585 (845)
+.-..||+...++|..+++|...... ....+...|++.+..|... .++..+ | +..-++..+.|+++++|...
T Consensus 36 s~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 36 SYENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 45578999988888889999865332 2234556677777766321 122222 1 12224567889999988654
Q ss_pred cc--------------cccC--C--C---CCCCCHHHH-----H-----------------HHHHHHHHHHHH-Hhh-cC
Q 003139 586 RS--------------HLYG--T--D---LPPLSWKQR-----L-----------------EICIGAARGLHY-LHT-GA 620 (845)
Q Consensus 586 ~~--------------~l~~--~--~---~~~l~~~~~-----~-----------------~i~~~ia~gL~y-LH~-~~ 620 (845)
.. .||. . . ...+++... . +++.++..-++- +.. ..
T Consensus 115 ~~~~~~~~~~lG~~LarlH~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 194 (325)
T PRK11768 115 ELDNLDQLEWVGRFLGRIHQVGAKRPFEHRPTLDLQEYGIEPRDWLLASDLIPSDLRPAYLAAADQLLAAVEACWARGDV 194 (325)
T ss_pred CCCCHHHHHHHHHHHHHHHhhccCCCCCCCCcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22 1111 1 0 112221111 0 111111111111 111 13
Q ss_pred CCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 621 AQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 621 ~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
..++||+|+.+.|||++ + .+.|.||+-+..
T Consensus 195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~ 224 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARM 224 (325)
T ss_pred CccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence 45789999999999996 4 578999998865
No 500
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=94.98 E-value=0.38 Score=52.25 Aligned_cols=31 Identities=32% Similarity=0.404 Sum_probs=26.7
Q ss_pred CCceeeccCCCCcEEECCCCceEEEeccccCC
Q 003139 621 AQSIIHRDVKTTNILLDDNFVAKVADFGLSKT 652 (845)
Q Consensus 621 ~~~ivHrDik~~NILl~~~~~~kl~DFGla~~ 652 (845)
..+++|+|+.+.||+++. +.+.|.||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence 367999999999999998 5789999997654
Done!