Query 003140
Match_columns 845
No_of_seqs 788 out of 5876
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 14:42:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4.3E-47 1.5E-51 406.3 16.1 205 624-836 13-235 (299)
2 4aoj_A High affinity nerve gro 100.0 2.2E-46 7.4E-51 406.5 20.3 205 624-836 41-265 (329)
3 4b9d_A Serine/threonine-protei 100.0 4.5E-46 1.5E-50 404.0 19.6 203 624-836 24-229 (350)
4 3omv_A RAF proto-oncogene seri 100.0 4.9E-46 1.7E-50 398.2 18.4 205 620-836 32-241 (307)
5 4gt4_A Tyrosine-protein kinase 100.0 3.3E-46 1.1E-50 401.3 16.9 204 625-836 27-252 (308)
6 4fih_A Serine/threonine-protei 100.0 1.2E-45 4.1E-50 400.1 19.3 200 624-836 74-274 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-45 6.2E-50 392.8 18.4 203 624-836 32-238 (311)
8 4fie_A Serine/threonine-protei 100.0 1.3E-44 4.6E-49 401.4 21.3 201 623-836 150-351 (423)
9 3fpq_A Serine/threonine-protei 100.0 2.5E-44 8.6E-49 382.2 21.9 198 627-837 29-234 (290)
10 4g3f_A NF-kappa-beta-inducing 100.0 2.9E-44 9.9E-49 388.1 19.0 201 624-836 58-260 (336)
11 3hyh_A Carbon catabolite-derep 100.0 9.6E-44 3.3E-48 374.3 20.6 198 624-835 13-215 (275)
12 4ase_A Vascular endothelial gr 100.0 3.8E-44 1.3E-48 392.0 16.1 215 614-836 54-292 (353)
13 3ubd_A Ribosomal protein S6 ki 100.0 1.5E-44 5.2E-49 385.7 12.5 201 624-836 24-230 (304)
14 3hmm_A TGF-beta receptor type- 100.0 2.3E-43 7.7E-48 379.9 16.5 202 625-834 4-220 (303)
15 4g31_A Eukaryotic translation 100.0 2.4E-42 8.1E-47 370.2 19.5 206 624-835 5-230 (299)
16 1ogq_A PGIP-2, polygalacturona 100.0 4.1E-42 1.4E-46 373.0 16.7 295 31-332 2-302 (313)
17 3rgz_A Protein brassinosteroid 100.0 2.7E-41 9.1E-46 411.2 22.2 336 31-385 8-381 (768)
18 4b99_A Mitogen-activated prote 100.0 1E-40 3.5E-45 371.2 20.4 204 624-836 54-267 (398)
19 4f9c_A Cell division cycle 7-r 100.0 9E-41 3.1E-45 367.7 19.5 207 622-838 19-253 (361)
20 4ecn_A Leucine-rich repeat pro 100.0 1.6E-40 5.5E-45 402.5 20.8 336 28-385 262-741 (876)
21 4eco_A Uncharacterized protein 100.0 1.1E-40 3.9E-45 396.6 18.8 338 30-385 25-501 (636)
22 3v5w_A G-protein coupled recep 100.0 7.2E-40 2.5E-44 379.2 21.0 198 624-835 189-394 (689)
23 3uto_A Twitchin; kinase, muscl 100.0 2.5E-39 8.4E-44 377.6 21.7 201 624-836 157-360 (573)
24 3v47_A TOLL-like receptor 5B a 100.0 1.4E-38 4.7E-43 364.0 20.7 331 61-397 6-421 (455)
25 2id5_A Lingo-1, leucine rich r 100.0 1.6E-37 5.5E-42 357.5 20.0 329 62-397 6-345 (477)
26 3fxz_A Serine/threonine-protei 100.0 1E-36 3.4E-41 328.2 23.0 201 623-836 19-220 (297)
27 4aw2_A Serine/threonine-protei 100.0 1.8E-37 6E-42 350.6 17.2 213 614-836 64-285 (437)
28 3uim_A Brassinosteroid insensi 100.0 2.1E-37 7.3E-42 338.0 17.2 221 607-833 13-236 (326)
29 2qkw_B Protein kinase; three-h 100.0 2.5E-37 8.6E-42 336.8 17.1 212 616-835 31-244 (321)
30 3fe3_A MAP/microtubule affinit 100.0 1.3E-36 4.6E-41 331.6 20.6 201 623-836 14-218 (328)
31 3rgz_A Protein brassinosteroid 100.0 5.5E-37 1.9E-41 373.2 19.5 302 81-388 342-720 (768)
32 2c30_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 328.0 23.4 212 612-836 23-245 (321)
33 1o6l_A RAC-beta serine/threoni 100.0 1.9E-36 6.3E-41 331.5 20.1 201 624-836 5-209 (337)
34 3v8s_A RHO-associated protein 100.0 4.9E-37 1.7E-41 344.3 15.7 209 616-836 61-277 (410)
35 3s95_A LIMK-1, LIM domain kina 100.0 6.4E-36 2.2E-40 323.9 23.9 209 623-835 9-225 (310)
36 3vq2_A TLR4, TOLL-like recepto 100.0 8.4E-36 2.9E-40 353.7 27.0 328 69-401 15-574 (606)
37 2vd5_A DMPK protein; serine/th 100.0 8.3E-37 2.8E-41 342.7 17.2 213 614-836 51-274 (412)
38 2psq_A Fibroblast growth facto 100.0 3.7E-36 1.3E-40 334.0 20.9 205 623-835 80-309 (370)
39 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.7E-36 5.7E-41 334.1 17.9 204 621-836 20-228 (353)
40 3zgw_A Maternal embryonic leuc 100.0 2.5E-36 8.7E-41 331.5 19.1 204 622-836 8-214 (347)
41 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.8E-36 6.2E-41 336.2 18.1 204 621-835 62-288 (365)
42 4eqm_A Protein kinase; transfe 100.0 5.2E-36 1.8E-40 322.1 21.0 203 623-836 10-216 (294)
43 1fot_A TPK1 delta, CAMP-depend 100.0 5E-36 1.7E-40 325.6 19.9 198 624-836 6-207 (318)
44 2yab_A Death-associated protei 100.0 9.3E-36 3.2E-40 329.0 22.4 201 623-836 11-222 (361)
45 3p86_A Serine/threonine-protei 100.0 2.3E-36 8E-41 327.2 16.5 212 616-836 29-243 (309)
46 4dc2_A Protein kinase C IOTA t 100.0 5E-36 1.7E-40 334.3 19.3 200 623-834 51-255 (396)
47 1xjd_A Protein kinase C, theta 100.0 6E-36 2.1E-40 328.4 19.5 205 620-836 13-222 (345)
48 1tki_A Titin; serine kinase, m 100.0 1.3E-35 4.5E-40 323.0 21.4 201 623-836 4-207 (321)
49 3gni_B Strad alpha; kinase fol 100.0 1.3E-35 4.3E-40 332.4 21.1 211 623-836 24-241 (389)
50 3a8x_A Protein kinase C IOTA t 100.0 1.1E-35 3.9E-40 326.6 20.3 199 624-834 9-212 (345)
51 2acx_A G protein-coupled recep 100.0 9.2E-36 3.1E-40 344.6 20.2 204 622-836 182-389 (576)
52 4fr4_A YANK1, serine/threonine 100.0 1E-35 3.4E-40 330.8 19.5 200 623-835 14-220 (384)
53 3a62_A Ribosomal protein S6 ki 100.0 1.3E-35 4.5E-40 324.0 20.2 202 623-836 16-225 (327)
54 3kul_A Ephrin type-A receptor 100.0 9.6E-36 3.3E-40 324.8 19.0 206 623-836 48-259 (325)
55 2izr_A Casein kinase I isoform 100.0 1.5E-35 5.2E-40 324.0 20.4 206 623-835 8-220 (330)
56 2bdw_A Hypothetical protein K1 100.0 2.5E-35 8.4E-40 326.3 22.0 201 623-836 28-234 (362)
57 2nru_A Interleukin-1 receptor- 100.0 4.6E-35 1.6E-39 316.6 23.6 216 611-836 12-238 (307)
58 3niz_A Rhodanese family protei 100.0 2.4E-35 8.1E-40 319.7 21.2 202 623-836 20-224 (311)
59 1kob_A Twitchin; kinase, intra 100.0 2.6E-35 9E-40 328.4 22.2 202 623-836 50-254 (387)
60 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.2E-35 4.2E-40 326.9 19.2 198 624-836 41-242 (350)
61 2y0a_A Death-associated protei 100.0 3.2E-35 1.1E-39 320.9 22.3 200 623-835 10-220 (326)
62 2i0e_A Protein kinase C-beta I 100.0 1.1E-35 3.8E-40 327.3 18.9 203 622-836 18-225 (353)
63 3c0i_A Peripheral plasma membr 100.0 1.7E-35 5.8E-40 326.4 20.3 203 623-835 23-236 (351)
64 3tki_A Serine/threonine-protei 100.0 8.1E-36 2.8E-40 325.1 16.6 204 624-837 7-213 (323)
65 4hcu_A Tyrosine-protein kinase 100.0 6.7E-36 2.3E-40 316.8 15.5 204 622-836 8-212 (269)
66 3soc_A Activin receptor type-2 100.0 6.4E-36 2.2E-40 325.8 15.7 203 621-836 21-242 (322)
67 3llt_A Serine/threonine kinase 100.0 1.8E-35 6.2E-40 327.4 19.5 212 610-836 21-263 (360)
68 3sxs_A Cytoplasmic tyrosine-pr 100.0 1E-35 3.5E-40 315.1 16.5 204 622-836 6-210 (268)
69 2qol_A Ephrin receptor; recept 100.0 1.5E-35 5E-40 329.5 18.6 206 623-836 44-255 (373)
70 3vhe_A Vascular endothelial gr 100.0 5.9E-36 2E-40 331.1 15.0 215 614-836 12-300 (359)
71 4euu_A Serine/threonine-protei 100.0 2.8E-35 9.4E-40 320.3 19.7 200 624-834 9-225 (319)
72 3o6n_A APL1; leucine-rich repe 100.0 2.2E-35 7.7E-40 330.5 19.4 332 54-397 3-364 (390)
73 1qcf_A Haematopoetic cell kina 100.0 3.9E-36 1.3E-40 343.3 13.3 209 616-835 180-389 (454)
74 2pmi_A Negative RE, cyclin-dep 100.0 4.5E-35 1.5E-39 318.4 21.0 203 623-836 4-213 (317)
75 2x4f_A Myosin light chain kina 100.0 2.6E-35 9E-40 327.3 19.3 196 629-836 94-292 (373)
76 3t6q_A CD180 antigen; protein- 100.0 2.1E-35 7.1E-40 350.3 19.6 312 83-401 255-576 (606)
77 1k9a_A Carboxyl-terminal SRC k 100.0 2.1E-35 7.2E-40 336.7 18.8 201 619-835 188-390 (450)
78 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.5E-35 1.2E-39 339.0 20.7 204 623-836 184-393 (543)
79 1opk_A P150, C-ABL, proto-onco 100.0 7.7E-36 2.6E-40 344.2 15.0 210 617-836 213-424 (495)
80 3ork_A Serine/threonine protei 100.0 1.2E-35 4.2E-40 321.9 15.7 205 623-836 11-223 (311)
81 4g8a_A TOLL-like receptor 4; l 100.0 6.6E-35 2.3E-39 347.4 23.5 341 69-416 35-609 (635)
82 2r5t_A Serine/threonine-protei 100.0 1.9E-35 6.7E-40 327.7 17.5 200 624-835 38-242 (373)
83 3gen_A Tyrosine-protein kinase 100.0 1.3E-35 4.4E-40 317.0 15.0 208 618-836 18-226 (283)
84 3soa_A Calcium/calmodulin-depe 100.0 5.6E-35 1.9E-39 331.3 21.0 203 622-836 9-217 (444)
85 1ob3_A PFPK5, cell division co 100.0 3.7E-35 1.3E-39 314.5 18.1 201 624-836 2-205 (288)
86 3o0g_A Cell division protein k 100.0 6.7E-35 2.3E-39 313.0 20.1 202 624-837 2-207 (292)
87 2w4o_A Calcium/calmodulin-depe 100.0 4.4E-35 1.5E-39 322.7 19.1 200 623-837 52-255 (349)
88 1luf_A Muscle-specific tyrosin 100.0 1.8E-35 6E-40 325.0 15.8 210 619-836 42-281 (343)
89 4ejn_A RAC-alpha serine/threon 100.0 1.8E-35 6.2E-40 337.1 16.3 202 623-836 147-353 (446)
90 3p1a_A MYT1 kinase, membrane-a 100.0 4E-35 1.4E-39 317.9 18.1 198 623-834 56-257 (311)
91 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-34 5.3E-39 339.5 24.5 304 82-397 52-523 (562)
92 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.2E-35 1.1E-39 321.4 17.3 198 624-835 9-211 (336)
93 3cbl_A C-FES, proto-oncogene t 100.0 1.1E-35 3.7E-40 331.3 13.8 210 618-836 108-320 (377)
94 3qd2_B Eukaryotic translation 100.0 6.4E-35 2.2E-39 318.7 19.6 208 623-833 5-277 (332)
95 3ugc_A Tyrosine-protein kinase 100.0 2.4E-35 8.2E-40 317.0 15.9 204 623-834 9-219 (295)
96 3g33_A Cell division protein k 100.0 7.7E-35 2.7E-39 315.1 20.0 204 621-836 6-223 (308)
97 2ivs_A Proto-oncogene tyrosine 100.0 2.4E-35 8.2E-40 319.7 16.0 210 619-836 18-257 (314)
98 1nxk_A MAP kinase-activated pr 100.0 7.7E-35 2.6E-39 326.7 20.4 197 624-836 61-267 (400)
99 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-35 1.9E-39 314.6 18.4 200 623-835 12-243 (298)
100 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-35 4.5E-40 338.5 14.1 209 616-835 176-385 (452)
101 3tt0_A Basic fibroblast growth 100.0 8.8E-35 3E-39 324.6 20.5 207 621-835 66-297 (382)
102 3op5_A Serine/threonine-protei 100.0 3.4E-35 1.2E-39 325.8 17.0 208 622-834 33-263 (364)
103 2z7x_B TOLL-like receptor 1, v 100.0 2.5E-35 8.4E-40 343.1 16.6 166 223-397 321-494 (520)
104 3kfa_A Tyrosine-protein kinase 100.0 2.2E-35 7.6E-40 315.9 14.9 210 617-836 6-217 (288)
105 3l9p_A Anaplastic lymphoma kin 100.0 1.7E-35 5.9E-40 328.3 14.3 206 623-836 70-291 (367)
106 1qpc_A LCK kinase; alpha beta 100.0 2.6E-35 9E-40 313.9 15.1 208 618-836 7-215 (279)
107 1rjb_A FL cytokine receptor; k 100.0 4.6E-35 1.6E-39 322.0 17.1 211 618-836 39-279 (344)
108 2ac3_A MAP kinase-interacting 100.0 9.8E-35 3.4E-39 315.3 19.4 207 624-835 12-229 (316)
109 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-34 5.2E-39 307.6 20.5 200 623-836 8-211 (277)
110 1t46_A HOMO sapiens V-KIT hard 100.0 6.5E-35 2.2E-39 316.1 17.6 210 619-836 18-252 (313)
111 3oja_B Anopheles plasmodium-re 100.0 7.2E-35 2.5E-39 344.5 19.4 333 53-397 8-370 (597)
112 3lb7_A RAF proto-oncogene seri 100.0 1.6E-34 5.3E-39 312.6 20.3 204 621-836 33-241 (307)
113 3kn6_A Ribosomal protein S6 ki 100.0 1.4E-34 4.7E-39 315.6 19.8 193 629-836 16-213 (325)
114 3uc3_A Serine/threonine-protei 100.0 9.1E-35 3.1E-39 321.7 18.4 200 623-836 19-222 (361)
115 1csn_A Casein kinase-1; phosph 100.0 3.3E-34 1.1E-38 308.2 22.3 207 623-836 9-222 (298)
116 3qup_A Tyrosine-protein kinase 100.0 3.3E-35 1.1E-39 320.2 14.5 211 618-836 17-244 (323)
117 3oz6_A Mitogen-activated prote 100.0 2.6E-34 8.8E-39 321.6 21.6 208 622-836 7-235 (388)
118 3hko_A Calcium/calmodulin-depe 100.0 6E-35 2E-39 321.2 16.2 213 618-836 20-280 (345)
119 3poz_A Epidermal growth factor 100.0 7.8E-35 2.7E-39 317.9 16.9 203 623-835 14-223 (327)
120 2a2a_A Death-associated protei 100.0 2.6E-34 9E-39 312.9 20.9 200 623-835 11-221 (321)
121 3dtc_A Mitogen-activated prote 100.0 1.3E-34 4.4E-39 307.1 17.8 201 623-836 6-218 (271)
122 1mp8_A Focal adhesion kinase 1 100.0 5.8E-35 2E-39 311.7 15.2 205 621-836 12-222 (281)
123 3ttj_A Mitogen-activated prote 100.0 1.1E-34 3.8E-39 331.4 18.5 198 623-836 61-267 (464)
124 3dls_A PAS domain-containing s 100.0 6.1E-35 2.1E-39 319.7 15.5 204 622-838 22-236 (335)
125 1u5q_A Serine/threonine protei 100.0 2.2E-34 7.5E-39 316.9 19.9 197 624-836 54-257 (348)
126 2y94_A 5'-AMP-activated protei 100.0 1.7E-34 6E-39 329.4 19.4 200 624-836 16-220 (476)
127 3dbq_A Dual specificity protei 100.0 1.9E-34 6.6E-39 317.0 18.8 203 623-837 8-225 (343)
128 3t9t_A Tyrosine-protein kinase 100.0 6.8E-35 2.3E-39 308.4 14.6 203 622-835 6-209 (267)
129 2i1m_A Macrophage colony-stimu 100.0 7.4E-35 2.5E-39 318.9 15.4 210 618-835 40-270 (333)
130 3kmu_A ILK, integrin-linked ki 100.0 1.4E-34 4.6E-39 306.5 16.8 200 623-836 9-215 (271)
131 2eue_A Carbon catabolite derep 100.0 3.8E-34 1.3E-38 304.3 20.0 199 624-836 13-216 (275)
132 3kk8_A Calcium/calmodulin depe 100.0 6.7E-34 2.3E-38 303.7 21.9 201 623-836 5-211 (284)
133 2h8h_A Proto-oncogene tyrosine 100.0 2.6E-35 8.8E-40 343.0 11.8 209 616-835 259-468 (535)
134 2pvf_A Fibroblast growth facto 100.0 2.7E-34 9.4E-39 314.6 19.4 207 621-835 32-263 (334)
135 3q4u_A Activin receptor type-1 100.0 2.2E-34 7.7E-39 310.1 18.3 199 623-834 7-235 (301)
136 4agu_A Cyclin-dependent kinase 100.0 4E-34 1.4E-38 309.8 20.2 201 624-836 3-207 (311)
137 3kex_A Receptor tyrosine-prote 100.0 9.8E-35 3.3E-39 316.9 15.1 203 624-836 13-222 (325)
138 3fdn_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 305.3 19.0 200 623-836 8-211 (279)
139 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-34 9.4E-39 342.3 20.1 204 621-836 338-546 (674)
140 3rp9_A Mitogen-activated prote 100.0 3.6E-34 1.2E-38 327.6 20.3 199 624-828 53-280 (458)
141 2zmd_A Dual specificity protei 100.0 2.7E-34 9.2E-39 321.3 18.6 201 624-836 56-271 (390)
142 1vzo_A Ribosomal protein S6 ki 100.0 9.9E-35 3.4E-39 320.8 14.9 202 623-835 53-265 (355)
143 3lm5_A Serine/threonine-protei 100.0 2.6E-34 8.9E-39 313.8 18.1 214 612-836 16-237 (327)
144 3cok_A Serine/threonine-protei 100.0 2.8E-34 9.7E-39 305.7 17.8 201 624-835 11-215 (278)
145 4fvq_A Tyrosine-protein kinase 100.0 1.4E-34 4.8E-39 309.9 15.5 198 623-835 7-221 (289)
146 1p4o_A Insulin-like growth fac 100.0 7.4E-35 2.5E-39 317.2 13.5 214 614-835 15-244 (322)
147 3is5_A Calcium-dependent prote 100.0 3.8E-34 1.3E-38 306.1 18.6 200 624-835 22-228 (285)
148 4eco_A Uncharacterized protein 100.0 3E-34 1E-38 341.4 19.5 298 80-386 247-601 (636)
149 3bhy_A Death-associated protei 100.0 9.1E-34 3.1E-38 302.5 21.1 201 623-836 4-215 (283)
150 2rku_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38 303.8 21.9 200 624-835 15-218 (294)
151 4eut_A Serine/threonine-protei 100.0 1.4E-34 4.7E-39 324.6 15.1 200 624-834 9-225 (396)
152 2xir_A Vascular endothelial gr 100.0 1.9E-34 6.6E-39 312.9 15.6 215 614-836 17-255 (316)
153 2owb_A Serine/threonine-protei 100.0 9.7E-34 3.3E-38 310.3 21.3 200 624-835 41-244 (335)
154 2v62_A Serine/threonine-protei 100.0 1.7E-34 5.8E-39 317.7 15.2 206 623-834 36-262 (345)
155 3lxl_A Tyrosine-protein kinase 100.0 3.1E-34 1.1E-38 313.1 17.1 204 623-834 22-232 (327)
156 3n9x_A Phosphotransferase; mal 100.0 7.7E-34 2.6E-38 322.1 20.9 205 623-833 25-253 (432)
157 2a19_B Interferon-induced, dou 100.0 4.2E-34 1.4E-38 305.1 17.3 197 622-833 9-222 (284)
158 2y7j_A Phosphorylase B kinase 100.0 1.3E-33 4.5E-38 312.9 21.9 207 617-836 87-309 (365)
159 3mtl_A Cell division protein k 100.0 2.5E-34 8.4E-39 313.6 15.8 201 624-836 2-205 (324)
160 3eqc_A Dual specificity mitoge 100.0 4E-34 1.4E-38 316.6 17.7 200 623-836 32-234 (360)
161 3kvw_A DYRK2, dual specificity 100.0 8.6E-34 2.9E-38 321.2 20.6 199 623-836 96-303 (429)
162 1cm8_A Phosphorylated MAP kina 100.0 3.9E-34 1.3E-38 317.3 17.5 197 623-836 24-230 (367)
163 4f0f_A Serine/threonine-protei 100.0 9.3E-34 3.2E-38 303.2 19.7 200 623-836 18-232 (287)
164 2jam_A Calcium/calmodulin-depe 100.0 6E-34 2.1E-38 307.5 18.3 199 623-835 8-210 (304)
165 2h34_A Serine/threonine-protei 100.0 7.1E-34 2.4E-38 307.7 18.9 203 623-836 33-239 (309)
166 2eva_A TAK1 kinase - TAB1 chim 100.0 5.2E-34 1.8E-38 308.5 17.7 197 624-835 8-206 (307)
167 2vgo_A Serine/threonine-protei 100.0 8.4E-34 2.9E-38 303.1 19.1 199 624-836 14-216 (284)
168 1ziw_A TOLL-like receptor 3; i 100.0 3.3E-33 1.1E-37 336.1 26.5 312 84-400 250-638 (680)
169 2jii_A Serine/threonine-protei 100.0 1.1E-34 3.6E-39 320.3 12.3 204 624-836 42-272 (352)
170 4e5w_A Tyrosine-protein kinase 100.0 5.9E-34 2E-38 307.0 17.6 202 624-833 21-230 (302)
171 2r3i_A Cell division protein k 100.0 8.2E-34 2.8E-38 305.4 18.7 202 624-836 3-208 (299)
172 1u59_A Tyrosine-protein kinase 100.0 1.2E-33 4.2E-38 302.4 20.0 204 624-836 9-218 (287)
173 2yex_A Serine/threonine-protei 100.0 5.8E-34 2E-38 302.8 17.3 205 623-837 6-213 (276)
174 2qr7_A Ribosomal protein S6 ki 100.0 3.8E-34 1.3E-38 314.1 16.3 197 623-835 21-223 (342)
175 2clq_A Mitogen-activated prote 100.0 1.4E-33 4.8E-38 302.9 20.4 201 625-835 23-228 (295)
176 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.5E-34 1.5E-38 312.2 16.6 202 622-836 32-242 (329)
177 3og7_A AKAP9-BRAF fusion prote 100.0 7.3E-34 2.5E-38 304.5 18.0 205 620-836 20-229 (289)
178 3cc6_A Protein tyrosine kinase 100.0 9.9E-34 3.4E-38 302.1 18.6 203 622-835 10-218 (281)
179 3eb0_A Putative uncharacterize 100.0 9.4E-34 3.2E-38 316.4 19.3 201 620-836 3-246 (383)
180 3nsz_A CK II alpha, casein kin 100.0 2.1E-33 7.3E-38 306.7 21.7 195 624-837 36-236 (330)
181 3a7i_A MST3 kinase, serine/thr 100.0 2.4E-33 8.1E-38 302.6 21.8 200 623-835 21-222 (303)
182 3byv_A Rhoptry kinase; malaria 100.0 8.4E-35 2.9E-39 324.2 10.6 199 623-836 72-317 (377)
183 2xrw_A Mitogen-activated prote 100.0 1.2E-33 4E-38 314.2 19.7 198 623-836 24-230 (371)
184 2ozo_A Tyrosine-protein kinase 100.0 7.6E-34 2.6E-38 335.4 19.2 197 631-836 343-544 (613)
185 4aaa_A Cyclin-dependent kinase 100.0 1.1E-33 3.7E-38 309.4 19.1 201 624-836 25-229 (331)
186 3mi9_A Cell division protein k 100.0 1.5E-33 5.1E-38 310.9 20.4 205 624-836 17-233 (351)
187 3pg1_A Mitogen-activated prote 100.0 7.3E-34 2.5E-38 314.8 18.0 209 615-836 13-238 (362)
188 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-33 4.7E-38 301.5 19.4 199 623-835 10-234 (289)
189 3i6u_A CDS1, serine/threonine- 100.0 4.4E-34 1.5E-38 322.7 16.4 202 621-836 132-348 (419)
190 2x7f_A TRAF2 and NCK-interacti 100.0 4.6E-34 1.6E-38 311.5 15.7 212 614-836 14-238 (326)
191 1mqb_A Ephrin type-A receptor 100.0 1.3E-33 4.6E-38 308.9 19.2 204 624-835 44-254 (333)
192 2wqm_A Serine/threonine-protei 100.0 2.1E-33 7.1E-38 304.1 20.4 202 624-835 32-239 (310)
193 2wtk_C Serine/threonine-protei 100.0 2.7E-33 9.4E-38 302.3 21.3 204 623-835 4-216 (305)
194 3brb_A Proto-oncogene tyrosine 100.0 5.5E-34 1.9E-38 309.1 15.6 212 617-836 27-254 (313)
195 4hgt_A Casein kinase I isoform 100.0 2.3E-33 7.9E-38 301.3 20.3 208 622-836 7-219 (296)
196 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-33 5.1E-38 306.5 19.0 199 626-834 33-239 (318)
197 3uzp_A CKI-delta, CKID, casein 100.0 3.9E-33 1.3E-37 299.6 21.7 207 623-836 8-219 (296)
198 1ua2_A CAK, cell division prot 100.0 9.7E-34 3.3E-38 311.8 17.3 203 622-836 8-217 (346)
199 1t4h_A Serine/threonine-protei 100.0 4E-33 1.4E-37 298.8 21.6 200 625-837 27-234 (290)
200 1fvr_A Tyrosine-protein kinase 100.0 1.3E-33 4.5E-38 308.2 18.0 202 624-836 25-246 (327)
201 2z81_A CD282 antigen, TOLL-lik 100.0 4.2E-33 1.4E-37 326.4 23.6 324 65-397 4-523 (549)
202 3c1x_A Hepatocyte growth facto 100.0 6.3E-34 2.1E-38 316.1 15.6 204 625-835 90-300 (373)
203 2w5a_A Serine/threonine-protei 100.0 9.2E-34 3.1E-38 301.8 16.1 207 623-836 5-220 (279)
204 3g2f_A Bone morphogenetic prot 100.0 5.2E-34 1.8E-38 312.5 14.6 206 623-838 12-241 (336)
205 1ogq_A PGIP-2, polygalacturona 100.0 3.4E-34 1.1E-38 310.8 12.7 233 106-340 50-287 (313)
206 1blx_A Cyclin-dependent kinase 100.0 2E-33 6.8E-38 306.4 18.9 203 622-836 9-223 (326)
207 1byg_A CSK, protein (C-termina 100.0 5.7E-34 2E-38 303.4 14.2 198 622-835 19-218 (278)
208 2fst_X Mitogen-activated prote 100.0 6.9E-34 2.3E-38 315.2 15.3 197 623-836 28-234 (367)
209 3lzb_A Epidermal growth factor 100.0 1E-33 3.6E-38 308.9 16.6 204 623-836 14-224 (327)
210 3lij_A Calcium/calmodulin depe 100.0 2.2E-33 7.4E-38 324.2 20.0 200 623-836 36-241 (494)
211 3q5i_A Protein kinase; CDPK, m 100.0 4E-33 1.4E-37 322.7 22.3 200 623-836 35-251 (504)
212 1z57_A Dual specificity protei 100.0 3.3E-33 1.1E-37 305.9 20.4 199 623-836 13-238 (339)
213 1phk_A Phosphorylase kinase; g 100.0 5.8E-33 2E-37 298.7 21.7 201 623-836 16-233 (298)
214 2h6d_A 5'-AMP-activated protei 100.0 2.1E-33 7.1E-38 298.6 18.0 200 623-835 10-214 (276)
215 1j1b_A Glycogen synthase kinas 100.0 2.1E-33 7.3E-38 317.2 19.1 197 624-836 54-261 (420)
216 1wak_A Serine/threonine-protei 100.0 1.9E-33 6.6E-38 315.1 18.6 199 623-836 36-297 (397)
217 3an0_A Dual specificity mitoge 100.0 1.7E-33 5.7E-38 309.1 17.7 202 622-835 49-260 (340)
218 3nyv_A Calmodulin-domain prote 100.0 1.3E-33 4.4E-38 325.4 17.5 200 623-836 25-231 (484)
219 2yfx_A Tyrosine-protein kinase 100.0 1.1E-33 3.7E-38 308.9 15.9 207 622-836 28-250 (327)
220 2vwi_A Serine/threonine-protei 100.0 5.1E-34 1.7E-38 307.5 13.2 213 619-836 10-231 (303)
221 2buj_A Serine/threonine-protei 100.0 2E-33 6.7E-38 305.2 17.9 210 621-833 26-247 (317)
222 3mdy_A Bone morphogenetic prot 100.0 5.3E-33 1.8E-37 304.4 21.3 200 619-828 32-248 (337)
223 3pls_A Macrophage-stimulating 100.0 2.2E-33 7.6E-38 301.8 18.0 205 625-836 22-232 (298)
224 2i6l_A Mitogen-activated prote 100.0 3.5E-33 1.2E-37 303.3 19.7 202 624-836 11-229 (320)
225 3com_A Serine/threonine-protei 100.0 4E-33 1.4E-37 302.4 20.0 203 621-836 26-229 (314)
226 3fme_A Dual specificity mitoge 100.0 2.1E-33 7.1E-38 300.8 17.6 202 622-835 5-216 (290)
227 1xbb_A Tyrosine-protein kinase 100.0 1.2E-33 4.1E-38 303.1 15.7 205 622-836 14-225 (291)
228 3f66_A Hepatocyte growth facto 100.0 1.9E-33 6.6E-38 302.5 17.3 204 624-834 25-235 (298)
229 2pml_X PFPK7, Ser/Thr protein 100.0 6.4E-34 2.2E-38 313.3 13.7 202 623-837 30-257 (348)
230 2z63_A TOLL-like receptor 4, v 100.0 4.4E-33 1.5E-37 327.7 21.7 147 247-398 392-545 (570)
231 3ll6_A Cyclin G-associated kin 100.0 1.9E-33 6.4E-38 307.8 17.2 214 621-836 25-257 (337)
232 3mwu_A Calmodulin-domain prote 100.0 2.1E-33 7E-38 323.7 18.4 200 623-836 21-226 (486)
233 2j7t_A Serine/threonine-protei 100.0 1.5E-33 5E-38 303.9 16.0 203 623-836 18-226 (302)
234 4e7w_A Glycogen synthase kinas 100.0 2.4E-33 8.1E-38 314.1 18.3 198 624-836 40-246 (394)
235 3q60_A ROP5B; pseudokinase, tr 100.0 9E-34 3.1E-38 315.2 14.8 197 624-835 62-296 (371)
236 2ycf_A Serine/threonine-protei 100.0 2.8E-33 9.6E-38 304.9 18.3 201 622-836 8-223 (322)
237 3rgf_A Cyclin-dependent kinase 100.0 2.1E-33 7.1E-38 316.1 17.7 203 625-837 21-241 (405)
238 4ecn_A Leucine-rich repeat pro 100.0 6.6E-33 2.3E-37 335.9 23.1 290 81-384 447-818 (876)
239 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-33 7.5E-38 306.3 17.1 204 623-834 40-250 (326)
240 4fl3_A Tyrosine-protein kinase 100.0 1.8E-33 6.3E-38 332.9 17.6 197 630-836 375-577 (635)
241 3qyz_A Mitogen-activated prote 100.0 4.3E-33 1.5E-37 308.8 19.1 203 623-836 26-236 (364)
242 3sv0_A Casein kinase I-like; t 100.0 1.2E-32 4.2E-37 314.8 22.9 208 623-837 6-218 (483)
243 3j0a_A TOLL-like receptor 5; m 100.0 7.2E-33 2.5E-37 340.4 22.5 299 82-397 266-572 (844)
244 2b9h_A MAP kinase FUS3, mitoge 100.0 7.8E-33 2.7E-37 305.3 20.1 207 623-836 10-227 (353)
245 2vx3_A Dual specificity tyrosi 100.0 1E-32 3.4E-37 308.0 20.3 203 621-836 51-262 (382)
246 3e3p_A Protein kinase, putativ 100.0 8.7E-33 3E-37 305.8 19.2 207 617-836 16-236 (360)
247 4exu_A Mitogen-activated prote 100.0 6.4E-33 2.2E-37 308.2 17.8 196 623-836 41-246 (371)
248 3cek_A Dual specificity protei 100.0 3.8E-33 1.3E-37 302.5 15.3 212 613-836 17-243 (313)
249 2eu9_A Dual specificity protei 100.0 1.5E-32 5E-37 303.0 19.9 199 623-836 18-243 (355)
250 3t6q_A CD180 antigen; protein- 100.0 3E-32 1E-36 323.1 23.5 318 61-385 6-389 (606)
251 3gxj_A TGF-beta receptor type- 100.0 1.5E-34 5.2E-39 311.6 3.3 199 623-834 2-230 (303)
252 1b6c_B TGF-B superfamily recep 100.0 1.6E-32 5.5E-37 301.3 19.4 206 617-835 35-270 (342)
253 1u46_A ACK-1, activated CDC42 100.0 4.5E-33 1.5E-37 298.3 14.6 204 623-835 17-228 (291)
254 3aln_A Dual specificity mitoge 100.0 1.6E-32 5.5E-37 299.5 18.8 202 623-836 21-233 (327)
255 1q8y_A SR protein kinase; tran 100.0 9.1E-33 3.1E-37 307.1 16.2 199 623-836 18-239 (373)
256 3fhr_A MAP kinase-activated pr 100.0 1.2E-32 4E-37 301.8 16.8 197 623-835 27-232 (336)
257 2j0j_A Focal adhesion kinase 1 100.0 1.2E-32 4.2E-37 327.1 17.6 208 618-836 384-597 (656)
258 3coi_A Mitogen-activated prote 100.0 1.4E-32 4.7E-37 303.5 15.8 195 624-836 24-228 (353)
259 2wei_A Calmodulin-domain prote 100.0 2.8E-32 9.4E-37 291.9 17.5 200 622-835 20-225 (287)
260 2iwi_A Serine/threonine-protei 100.0 5.5E-33 1.9E-37 301.1 12.1 204 619-836 26-243 (312)
261 1zy4_A Serine/threonine-protei 100.0 4.5E-32 1.6E-36 291.9 18.7 200 623-827 5-226 (303)
262 3a99_A Proto-oncogene serine/t 100.0 6.8E-33 2.3E-37 301.6 12.0 203 620-836 39-253 (320)
263 2id5_A Lingo-1, leucine rich r 100.0 1.4E-31 4.8E-36 307.9 22.7 292 85-385 14-309 (477)
264 4fcg_A Uncharacterized protein 100.0 1.4E-32 4.8E-37 299.9 13.7 284 32-365 24-316 (328)
265 2y4i_B KSR2, HKSR2, kinase sup 100.0 4.9E-33 1.7E-37 302.3 9.7 212 616-836 25-247 (319)
266 2rio_A Serine/threonine-protei 100.0 3.4E-32 1.2E-36 308.7 17.0 201 625-835 16-243 (434)
267 3v47_A TOLL-like receptor 5B a 100.0 3.5E-32 1.2E-36 310.9 15.8 282 80-367 52-412 (455)
268 3j0a_A TOLL-like receptor 5; m 100.0 3.1E-31 1.1E-35 325.8 25.2 299 80-384 22-374 (844)
269 1ziw_A TOLL-like receptor 3; i 100.0 4E-31 1.4E-35 317.8 25.4 185 63-248 2-192 (680)
270 3qa8_A MGC80376 protein; kinas 100.0 2.3E-32 7.7E-37 319.2 13.8 201 624-835 14-226 (676)
271 2dyl_A Dual specificity mitoge 100.0 8.4E-32 2.9E-36 292.3 16.9 201 623-836 24-233 (318)
272 2pzi_A Probable serine/threoni 100.0 6.3E-32 2.1E-36 323.9 16.6 191 624-834 80-278 (681)
273 3p23_A Serine/threonine-protei 100.0 8.3E-32 2.8E-36 304.7 15.8 202 622-835 22-233 (432)
274 2z7x_B TOLL-like receptor 1, v 100.0 3E-31 1E-35 308.6 20.4 290 82-385 21-457 (520)
275 2vuw_A Serine/threonine-protei 100.0 5.8E-33 2E-37 304.3 3.6 192 623-834 19-279 (336)
276 1xku_A Decorin; proteoglycan, 100.0 2.6E-30 8.8E-35 282.5 23.8 290 83-383 32-330 (330)
277 2ft3_A Biglycan; proteoglycan, 100.0 2.3E-30 7.7E-35 283.2 22.6 289 83-383 34-331 (332)
278 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.8E-30 9.6E-35 303.3 23.7 147 85-238 34-181 (562)
279 1xku_A Decorin; proteoglycan, 100.0 7.2E-30 2.5E-34 278.9 25.1 288 61-361 27-330 (330)
280 2z80_A TOLL-like receptor 2, v 100.0 1.5E-31 5.2E-36 295.1 11.3 279 90-397 39-327 (353)
281 2ft3_A Biglycan; proteoglycan, 100.0 4.1E-30 1.4E-34 281.1 21.9 287 61-361 29-331 (332)
282 3uqc_A Probable conserved tran 100.0 1.4E-30 4.9E-35 278.4 17.8 173 624-837 31-207 (286)
283 3zyi_A Leucine-rich repeat-con 100.0 3.3E-30 1.1E-34 294.3 21.5 258 108-397 56-315 (452)
284 3zyj_A Leucine-rich repeat-con 100.0 4.6E-30 1.6E-34 292.0 22.7 259 108-398 45-305 (440)
285 3dzo_A Rhoptry kinase domain; 100.0 5.8E-31 2E-35 296.5 13.1 197 624-835 78-320 (413)
286 4fmz_A Internalin; leucine ric 100.0 1.3E-29 4.4E-34 278.8 23.3 281 82-385 66-346 (347)
287 3m2w_A MAP kinase-activated pr 100.0 3.7E-30 1.3E-34 277.2 18.4 175 624-835 17-201 (299)
288 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-29 4.9E-34 300.1 22.8 153 85-240 14-167 (606)
289 2z66_A Variable lymphocyte rec 100.0 2.2E-30 7.6E-35 279.8 12.6 255 61-336 3-263 (306)
290 3o6n_A APL1; leucine-rich repe 100.0 2.8E-29 9.5E-34 280.9 20.8 272 102-384 41-330 (390)
291 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-28 5.9E-33 279.6 27.4 278 82-385 64-352 (457)
292 3oja_B Anopheles plasmodium-re 100.0 3.9E-29 1.3E-33 295.4 21.3 271 104-385 49-337 (597)
293 2z81_A CD282 antigen, TOLL-lik 100.0 8.1E-30 2.8E-34 298.5 14.4 171 87-261 10-182 (549)
294 1o6v_A Internalin A; bacterial 100.0 1.4E-28 4.9E-33 281.8 24.4 278 81-384 67-365 (466)
295 2z66_A Variable lymphocyte rec 100.0 3E-29 1E-33 271.0 15.6 258 109-398 10-274 (306)
296 1o6v_A Internalin A; bacterial 100.0 2.6E-28 8.9E-33 279.7 22.4 281 81-386 89-389 (466)
297 1wwl_A Monocyte differentiatio 100.0 1.8E-30 6.3E-35 281.3 3.9 244 83-335 44-310 (312)
298 4fmz_A Internalin; leucine ric 100.0 8.1E-28 2.8E-32 264.5 24.4 281 82-387 44-326 (347)
299 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-29 2.1E-33 265.6 13.0 254 85-343 14-270 (285)
300 4fcg_A Uncharacterized protein 100.0 3.3E-28 1.1E-32 265.3 18.5 233 105-385 80-314 (328)
301 2z63_A TOLL-like receptor 4, v 100.0 5.2E-28 1.8E-32 284.4 19.9 139 222-365 392-533 (570)
302 3zyj_A Leucine-rich repeat-con 100.0 1.2E-27 4E-32 272.2 22.0 243 87-335 48-293 (440)
303 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-27 7.9E-32 282.2 24.7 176 52-240 11-187 (635)
304 1jl5_A Outer protein YOPM; leu 100.0 8.3E-28 2.8E-32 273.7 19.0 268 82-386 11-291 (454)
305 3g06_A SSPH2 (leucine-rich rep 100.0 6E-28 2.1E-32 283.4 17.9 285 54-386 12-298 (622)
306 3zyi_A Leucine-rich repeat-con 99.9 3.1E-27 1.1E-31 269.7 20.8 246 85-336 57-305 (452)
307 1jl5_A Outer protein YOPM; leu 99.9 2.9E-26 1E-30 260.9 28.2 264 82-385 91-370 (454)
308 3bz5_A Internalin-J, INLJ; leu 99.9 7.4E-27 2.5E-31 266.1 21.7 274 82-386 42-332 (457)
309 4azs_A Methyltransferase WBDD; 99.9 8.3E-29 2.8E-33 288.8 5.4 185 631-831 241-437 (569)
310 1ozn_A Reticulon 4 receptor; N 99.9 4.9E-27 1.7E-31 250.9 18.3 235 109-397 14-250 (285)
311 2z80_A TOLL-like receptor 2, v 99.9 5.8E-28 2E-32 266.4 11.2 273 63-338 28-318 (353)
312 1wwl_A Monocyte differentiatio 99.9 8.3E-29 2.8E-33 268.3 4.0 226 102-335 39-288 (312)
313 3oja_A Leucine-rich immune mol 99.9 3.7E-28 1.3E-32 279.2 7.4 230 102-344 30-261 (487)
314 3o53_A Protein LRIM1, AGAP0063 99.9 8E-28 2.7E-32 261.1 6.7 258 83-358 11-270 (317)
315 2z62_A TOLL-like receptor 4, v 99.9 7.4E-26 2.5E-30 240.5 16.7 228 87-338 12-241 (276)
316 2o6q_A Variable lymphocyte rec 99.9 2.7E-25 9.2E-30 235.4 20.6 213 66-288 6-219 (270)
317 1p9a_G Platelet glycoprotein I 99.9 2.2E-25 7.6E-30 238.4 19.7 218 150-402 6-225 (290)
318 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-27 6.6E-32 258.1 1.4 244 82-339 34-281 (317)
319 3oja_A Leucine-rich immune mol 99.9 8E-27 2.8E-31 268.1 5.4 235 81-329 33-270 (487)
320 2z62_A TOLL-like receptor 4, v 99.9 3.5E-25 1.2E-29 235.3 15.6 229 61-291 1-241 (276)
321 3en9_A Glycoprotease, O-sialog 99.9 1.9E-26 6.4E-31 267.4 5.5 191 627-833 339-539 (540)
322 4glp_A Monocyte differentiatio 99.9 1.8E-24 6.1E-29 233.9 16.4 224 106-335 64-308 (310)
323 1z7x_W Ribonuclease inhibitor; 99.9 3.9E-28 1.3E-32 277.7 -14.5 304 83-386 57-412 (461)
324 3rfs_A Internalin B, repeat mo 99.9 1.8E-24 6.1E-29 229.3 14.6 211 102-347 37-248 (272)
325 3g06_A SSPH2 (leucine-rich rep 99.9 4.8E-23 1.6E-27 241.8 27.0 240 82-366 61-300 (622)
326 3rfs_A Internalin B, repeat mo 99.9 2.1E-24 7.1E-29 228.8 12.0 222 129-369 18-242 (272)
327 1p9a_G Platelet glycoprotein I 99.9 1.7E-23 5.9E-28 223.7 18.2 203 102-335 6-209 (290)
328 1z7x_W Ribonuclease inhibitor; 99.9 4.1E-27 1.4E-31 269.2 -12.2 303 82-385 3-354 (461)
329 2o6q_A Variable lymphocyte rec 99.9 9.1E-23 3.1E-27 215.9 22.0 204 107-337 17-221 (270)
330 3m19_A Variable lymphocyte rec 99.9 2.2E-23 7.7E-28 218.1 16.0 191 62-289 3-194 (251)
331 2xwt_C Thyrotropin receptor; s 99.9 2.8E-23 9.5E-28 215.7 14.1 195 107-307 32-236 (239)
332 4glp_A Monocyte differentiatio 99.9 6E-23 2.1E-27 221.9 12.4 225 82-311 64-308 (310)
333 3goz_A Leucine-rich repeat-con 99.9 6.8E-25 2.3E-29 242.7 -3.1 253 87-340 3-303 (362)
334 3m19_A Variable lymphocyte rec 99.9 2.3E-22 8E-27 210.3 15.6 178 131-312 15-194 (251)
335 2xwt_C Thyrotropin receptor; s 99.9 1.7E-22 5.7E-27 209.7 14.3 196 83-284 32-236 (239)
336 3cvr_A Invasion plasmid antige 99.9 2E-22 6.8E-27 233.7 15.2 224 131-397 60-292 (571)
337 4ay9_X Follicle-stimulating ho 99.9 5.8E-22 2E-26 218.0 17.4 247 63-334 7-259 (350)
338 1h6u_A Internalin H; cell adhe 99.9 4.5E-22 1.5E-26 214.7 15.8 195 126-335 37-231 (308)
339 1zar_A RIO2 kinase; serine kin 99.9 6.8E-23 2.3E-27 217.8 9.1 165 617-818 83-275 (282)
340 3goz_A Leucine-rich repeat-con 99.9 4.2E-24 1.4E-28 236.3 -1.0 255 110-364 2-298 (362)
341 2ast_B S-phase kinase-associat 99.9 7.7E-25 2.6E-29 239.5 -9.2 265 62-368 35-311 (336)
342 2ca6_A RAN GTPase-activating p 99.9 1.8E-24 6.3E-29 241.4 -6.5 241 98-338 24-320 (386)
343 2o6s_A Variable lymphocyte rec 99.9 7.6E-22 2.6E-26 200.2 12.5 186 61-274 3-189 (208)
344 4ay9_X Follicle-stimulating ho 99.9 1.2E-21 3.9E-26 215.6 15.0 242 109-388 12-261 (350)
345 2ca6_A RAN GTPase-activating p 99.9 5E-24 1.7E-28 237.9 -5.0 241 121-366 23-319 (386)
346 1h6u_A Internalin H; cell adhe 99.9 2.9E-21 9.8E-26 208.5 15.5 190 82-287 41-230 (308)
347 3cvr_A Invasion plasmid antige 99.8 1.6E-21 5.3E-26 226.2 12.7 202 56-292 35-248 (571)
348 2ast_B S-phase kinase-associat 99.8 5.7E-23 1.9E-27 224.6 0.0 247 107-386 48-307 (336)
349 2o6s_A Variable lymphocyte rec 99.8 1.4E-20 4.8E-25 190.7 14.7 179 109-321 10-189 (208)
350 3e6j_A Variable lymphocyte rec 99.8 1.7E-19 5.7E-24 185.8 15.3 154 66-240 20-173 (229)
351 2v9t_B SLIT homolog 2 protein 99.8 1.2E-19 4.2E-24 185.5 12.9 150 88-240 17-166 (220)
352 2xot_A Amphoterin-induced prot 99.8 1.1E-19 3.6E-24 200.8 12.6 185 157-393 21-210 (361)
353 1m9s_A Internalin B; cell inva 99.8 8E-20 2.7E-24 214.2 10.5 35 298-334 176-210 (605)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-19 8.9E-24 183.1 12.9 152 86-240 15-167 (220)
355 1h6t_A Internalin B; cell adhe 99.8 1.6E-19 5.3E-24 193.1 11.5 171 152-335 44-214 (291)
356 4b8c_D Glucose-repressible alc 99.8 1.5E-20 5E-25 225.9 3.4 231 34-284 131-369 (727)
357 1h6t_A Internalin B; cell adhe 99.8 3.3E-19 1.1E-23 190.5 12.8 189 108-311 26-214 (291)
358 1m9s_A Internalin B; cell inva 99.8 4.1E-19 1.4E-23 208.1 13.4 200 105-319 20-219 (605)
359 2xot_A Amphoterin-induced prot 99.8 3.7E-19 1.3E-23 196.4 11.4 152 86-240 22-177 (361)
360 2v9t_B SLIT homolog 2 protein 99.8 8.9E-19 3E-23 179.1 13.4 150 109-262 14-163 (220)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-18 3.4E-23 178.7 13.1 151 109-263 14-165 (220)
362 1zth_A RIO1 serine protein kin 99.8 7.2E-19 2.5E-23 184.4 9.8 137 626-776 49-220 (258)
363 1xeu_A Internalin C; cellular 99.8 4.2E-19 1.4E-23 186.8 7.4 171 104-289 17-187 (263)
364 3e6j_A Variable lymphocyte rec 99.8 6.5E-18 2.2E-22 173.8 16.1 133 154-288 40-173 (229)
365 3ogk_B Coronatine-insensitive 99.8 7.3E-21 2.5E-25 224.5 -7.0 295 84-384 140-500 (592)
366 3ogk_B Coronatine-insensitive 99.8 1.3E-20 4.4E-25 222.4 -5.7 298 82-385 164-526 (592)
367 1dce_A Protein (RAB geranylger 99.8 5.9E-21 2E-25 222.4 -8.7 203 103-338 346-550 (567)
368 4ezg_A Putative uncharacterize 99.7 2.5E-18 8.7E-23 172.5 10.0 131 103-239 41-172 (197)
369 4ezg_A Putative uncharacterize 99.7 3.4E-18 1.2E-22 171.6 10.5 154 126-287 40-194 (197)
370 1dce_A Protein (RAB geranylger 99.7 1.4E-20 4.6E-25 219.4 -8.4 199 153-379 348-567 (567)
371 1xeu_A Internalin C; cellular 99.7 6.5E-18 2.2E-22 177.7 10.5 171 128-336 17-187 (263)
372 4b8c_D Glucose-repressible alc 99.7 1E-18 3.6E-23 209.8 4.7 195 106-331 173-369 (727)
373 2p1m_B Transport inhibitor res 99.7 3.1E-19 1E-23 210.6 -9.1 296 82-384 105-493 (594)
374 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.8E-21 159.1 11.0 129 85-240 11-140 (192)
375 1w8a_A SLIT protein; signaling 99.7 1.2E-16 4E-21 159.6 9.2 105 133-240 11-116 (192)
376 2o6r_A Variable lymphocyte rec 99.7 2.5E-16 8.7E-21 154.9 11.4 136 61-216 3-138 (177)
377 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.9E-21 154.7 10.1 133 105-239 23-160 (168)
378 2ell_A Acidic leucine-rich nuc 99.6 2.8E-16 9.5E-21 153.2 9.9 132 154-287 24-160 (168)
379 2p1m_B Transport inhibitor res 99.6 1.6E-18 5.6E-23 204.4 -7.8 295 82-384 130-518 (594)
380 2wfh_A SLIT homolog 2 protein 99.6 1.2E-15 4E-20 152.5 11.7 125 86-214 14-138 (193)
381 2wfh_A SLIT homolog 2 protein 99.6 1.7E-15 6E-20 151.2 12.3 128 109-240 13-140 (193)
382 2je0_A Acidic leucine-rich nuc 99.6 2.1E-16 7.3E-21 150.7 5.4 109 106-216 17-127 (149)
383 4gyi_A RIO2 kinase; protein ki 99.6 8.3E-16 2.8E-20 167.5 9.7 139 624-777 95-267 (397)
384 2o6r_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 146.0 13.2 130 108-240 9-138 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 6.1E-16 2.1E-20 147.5 5.8 127 130-259 17-148 (149)
386 1a9n_A U2A', U2A'; complex (nu 99.5 7.5E-15 2.6E-19 144.3 5.9 134 100-239 13-153 (176)
387 3sb4_A Hypothetical leucine ri 99.5 1.1E-14 3.9E-19 158.2 7.2 213 153-378 100-327 (329)
388 1ds9_A Outer arm dynein; leuci 99.5 6.2E-17 2.1E-21 162.5 -10.1 130 106-240 18-154 (198)
389 1ds9_A Outer arm dynein; leuci 99.5 6.2E-17 2.1E-21 162.5 -10.4 155 126-287 14-185 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.3E-19 142.0 6.1 132 125-263 14-152 (176)
391 3sb4_A Hypothetical leucine ri 99.5 4.9E-14 1.7E-18 153.2 8.1 238 105-347 48-323 (329)
392 4fdw_A Leucine rich hypothetic 99.4 1.2E-12 3.9E-17 145.9 17.1 254 93-364 123-384 (401)
393 3g39_A Variable lymphocyte rec 99.4 2.6E-13 9E-18 132.3 10.0 104 85-191 12-115 (170)
394 3g39_A Variable lymphocyte rec 99.4 4.3E-13 1.5E-17 130.8 10.8 86 154-239 30-115 (170)
395 2r9u_A Variable lymphocyte rec 99.4 5E-13 1.7E-17 130.8 10.2 104 85-191 15-118 (174)
396 4fdw_A Leucine rich hypothetic 99.4 2.7E-12 9.2E-17 142.9 16.8 263 103-384 110-382 (401)
397 2r9u_A Variable lymphocyte rec 99.4 9.1E-13 3.1E-17 129.0 10.6 80 109-191 15-94 (174)
398 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.7E-17 142.1 8.4 111 62-192 4-117 (347)
399 3tm0_A Aminoglycoside 3'-phosp 99.2 1.8E-11 6.3E-16 128.1 11.4 145 622-774 12-213 (263)
400 2ifg_A High affinity nerve gro 99.2 8.1E-12 2.8E-16 136.6 7.0 102 111-215 13-116 (347)
401 3un9_A NLR family member X1; l 99.2 1E-13 3.5E-18 152.9 -9.4 47 298-344 212-262 (372)
402 3un9_A NLR family member X1; l 99.2 1.9E-13 6.5E-18 150.7 -7.9 65 223-287 180-252 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.1E-15 120.2 8.9 129 633-774 29-214 (264)
404 4fs7_A Uncharacterized protein 99.0 9.7E-09 3.3E-13 114.2 20.0 279 83-382 72-376 (394)
405 3dxp_A Putative acyl-COA dehyd 98.9 1.5E-09 5E-14 119.2 9.9 141 629-774 43-248 (359)
406 3sg8_A APH(2'')-ID; antibiotic 98.9 2E-09 7E-14 115.2 7.6 193 629-833 25-288 (304)
407 4fs7_A Uncharacterized protein 98.8 6.1E-08 2.1E-12 107.7 17.3 179 95-282 60-238 (394)
408 2ra8_A Uncharacterized protein 98.8 1.1E-09 3.7E-14 119.7 2.0 141 197-341 167-327 (362)
409 2ra8_A Uncharacterized protein 98.8 1.1E-09 3.8E-14 119.6 1.6 182 82-287 107-320 (362)
410 4gt6_A Cell surface protein; l 98.7 4.2E-07 1.5E-11 100.8 19.1 282 84-384 66-369 (394)
411 3rw6_A Nuclear RNA export fact 98.6 1.5E-10 5.1E-15 120.2 -9.9 78 177-257 169-257 (267)
412 4gt6_A Cell surface protein; l 98.6 2.5E-06 8.6E-11 94.6 21.6 267 99-382 56-344 (394)
413 3d1u_A Putative fructosamine-3 98.5 1.9E-07 6.7E-12 98.6 9.8 140 628-773 19-215 (288)
414 3r70_A Aminoglycoside phosphot 98.5 6.6E-07 2.3E-11 96.3 12.0 136 625-774 38-237 (320)
415 3rw6_A Nuclear RNA export fact 98.4 2.1E-08 7.1E-13 104.0 -2.8 105 126-232 137-257 (267)
416 4gkh_A Aminoglycoside 3'-phosp 98.4 2.4E-06 8.3E-11 89.2 12.8 135 631-774 31-223 (272)
417 3tdw_A Gentamicin resistance p 98.3 3.2E-06 1.1E-10 90.2 13.7 136 629-774 24-224 (306)
418 3rfe_A Platelet glycoprotein I 98.3 3E-07 1E-11 84.6 4.2 69 325-400 12-83 (130)
419 1io0_A Tropomodulin; LRR prote 98.3 3.2E-08 1.1E-12 97.4 -3.6 69 99-167 29-106 (185)
420 1io0_A Tropomodulin; LRR prote 98.2 1.1E-07 3.8E-12 93.6 -1.9 14 127-140 33-46 (185)
421 4h09_A Hypothetical leucine ri 98.2 6.4E-05 2.2E-09 82.6 19.5 239 83-334 47-299 (379)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 7E-06 2.4E-10 89.7 11.5 140 629-774 46-243 (362)
423 3ats_A Putative uncharacterize 98.1 2.9E-06 9.8E-11 92.7 7.0 79 629-707 25-120 (357)
424 4h09_A Hypothetical leucine ri 98.0 0.00043 1.5E-08 75.9 21.3 251 82-346 69-334 (379)
425 2olc_A MTR kinase, methylthior 97.9 2.7E-05 9.1E-10 86.3 10.3 75 629-705 35-120 (397)
426 2q83_A YTAA protein; 2635576, 97.9 3.9E-05 1.3E-09 82.8 10.4 140 630-774 38-252 (346)
427 3f7w_A Putative fructosamine-3 97.7 6.7E-05 2.3E-09 79.1 9.6 78 625-706 16-96 (288)
428 3jr1_A Putative fructosamine-3 97.7 0.00011 3.7E-09 78.2 11.0 137 629-770 41-232 (312)
429 3e4g_A ATP synthase subunit S, 97.5 1.4E-05 4.7E-10 76.9 -0.1 34 83-116 62-95 (176)
430 2pyw_A Uncharacterized protein 97.4 0.00042 1.4E-08 77.2 11.1 73 629-704 39-122 (420)
431 3e4g_A ATP synthase subunit S, 97.3 3.6E-05 1.2E-09 74.0 0.5 82 155-236 62-149 (176)
432 3csv_A Aminoglycoside phosphot 97.1 0.0021 7.1E-08 69.0 11.8 140 630-774 24-217 (333)
433 2ppq_A HSK, HK, homoserine kin 97.1 0.0021 7.3E-08 68.5 11.5 158 614-774 7-217 (322)
434 3feg_A Choline/ethanolamine ki 96.9 0.0018 6.2E-08 70.6 8.8 141 629-774 55-254 (379)
435 1nw1_A Choline kinase (49.2 KD 96.9 0.0015 5E-08 72.9 8.0 70 629-704 78-156 (429)
436 1zyl_A Hypothetical protein YI 96.9 0.0054 1.8E-07 65.5 12.1 141 630-774 32-223 (328)
437 1pgv_A TMD-1, tropomodulin TMD 96.8 9.5E-05 3.2E-09 72.4 -2.2 67 101-167 36-111 (197)
438 3dxq_A Choline/ethanolamine ki 96.8 0.0021 7.3E-08 67.9 7.9 137 629-774 23-202 (301)
439 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00052 1.8E-08 67.2 2.2 35 201-235 97-135 (197)
440 2qg7_A Ethanolamine kinase PV0 96.4 0.0085 2.9E-07 67.1 10.2 73 629-706 113-187 (458)
441 3rfe_A Platelet glycoprotein I 96.4 0.0042 1.4E-07 56.6 6.3 56 278-334 12-68 (130)
442 3i1a_A Spectinomycin phosphotr 96.2 0.018 6E-07 61.9 10.8 32 743-774 205-236 (339)
443 3c5i_A Choline kinase; choline 96.1 0.007 2.4E-07 65.9 7.2 72 630-706 39-120 (369)
444 3f2s_A CK, chetk-alpha, cholin 95.6 0.016 5.3E-07 63.5 7.1 140 630-773 58-279 (401)
445 2k1k_A Ephrin type-A receptor 94.1 0.026 8.9E-07 38.7 2.2 30 554-583 5-34 (38)
446 3mes_A Choline kinase; malaria 93.8 0.18 6.3E-06 55.5 9.9 73 629-706 75-156 (424)
447 3g15_A CK, chetk-alpha, cholin 89.9 0.69 2.3E-05 50.6 8.6 29 746-774 246-280 (401)
448 2ks1_B Epidermal growth factor 88.8 0.54 1.8E-05 33.2 4.2 8 561-568 12-19 (44)
449 2l2t_A Receptor tyrosine-prote 87.2 0.48 1.6E-05 33.4 3.2 8 565-572 12-19 (44)
450 2yle_A Protein spire homolog 1 86.6 2.4 8.3E-05 41.6 9.0 100 704-827 32-131 (229)
451 2jwa_A Receptor tyrosine-prote 82.2 1.3 4.6E-05 31.1 3.5 26 561-587 13-38 (44)
452 4ann_A ESSB; membrane protein, 76.5 4.2 0.00014 39.8 6.5 116 678-833 43-158 (215)
453 4ano_A ESSB; membrane protein, 76.0 8.8 0.0003 37.6 8.6 83 678-772 48-131 (219)
454 3cxl_A N-chimerin; SH2, RHO-GA 74.9 0.37 1.3E-05 53.8 -1.7 60 628-690 146-214 (463)
455 2ks1_B Epidermal growth factor 70.0 5.7 0.0002 28.0 4.0 20 560-579 8-27 (44)
456 2l2t_A Receptor tyrosine-prote 66.1 7.1 0.00024 27.5 3.8 32 558-589 8-39 (44)
457 1afo_A Glycophorin A; integral 60.6 10 0.00036 25.5 3.6 30 558-587 8-37 (40)
458 2k9y_A Ephrin type-A receptor 59.5 4 0.00014 28.2 1.7 16 562-577 12-27 (41)
459 2l34_A TYRO protein tyrosine k 54.6 8.4 0.00029 25.3 2.4 23 557-579 4-26 (33)
460 3ls8_A Phosphatidylinositol 3- 52.2 90 0.0031 35.5 12.1 46 721-773 454-501 (614)
461 2k1k_A Ephrin type-A receptor 42.5 37 0.0013 23.0 4.2 30 558-587 5-34 (38)
462 2x6h_A GH13170P, VPS34, phosph 39.7 2.3E+02 0.0079 32.7 13.0 45 722-773 529-575 (696)
463 2klu_A T-cell surface glycopro 35.1 39 0.0013 25.8 3.7 21 565-585 12-32 (70)
464 2knc_B Integrin beta-3; transm 31.1 28 0.00096 28.0 2.6 21 562-582 10-30 (79)
465 2lz0_A Uncharacterized protein 30.2 97 0.0033 25.9 6.1 38 148-186 14-51 (100)
466 2lz0_A Uncharacterized protein 27.4 1.3E+02 0.0045 25.0 6.4 47 165-212 7-53 (100)
467 2jwa_A Receptor tyrosine-prote 27.3 60 0.0021 22.8 3.3 31 561-591 9-39 (44)
468 1cja_A Protein (actin-fragmin 26.2 83 0.0028 32.8 5.8 138 630-774 75-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.3e-47 Score=406.32 Aligned_cols=205 Identities=32% Similarity=0.514 Sum_probs=179.4
Q ss_pred cCCCCCccccccCceEEEEEEeC------CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++|.+.+.||+|+||+||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56777899999999999999863 478899999988777777899999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003140 698 VYEFMSNGTLRDQLSAK-----------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl 766 (845)
|||||++|+|.++|+.. ....++|..++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 99999999999999763 2457999999999999999999999998 999999999999999999999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+|||+|+.....+ .........||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..
T Consensus 170 ~DFGla~~~~~~~-----~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~ 235 (299)
T 4asz_A 170 GDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS 235 (299)
T ss_dssp CCCSCHHHHTGGG-----CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred CCcccceecCCCC-----ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999998654221 1122233568999999999999999999999999999999999 999997643
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=406.47 Aligned_cols=205 Identities=32% Similarity=0.528 Sum_probs=174.0
Q ss_pred cCCCCCccccccCceEEEEEEeC------CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++|...+.||+|+||+||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666789999999999999864 478999999988777777899999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccC-------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 003140 698 VYEFMSNGTLRDQLSAKS-------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~ 764 (845)
|||||++|+|.++++... ..+++|..++.|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997642 246999999999999999999999988 9999999999999999999
Q ss_pred EEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 765 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
||+|||+|+.....+. ........||+.|||||++.+..|+.++|||||||++|||+| |+.||....
T Consensus 198 Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~ 265 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265 (329)
T ss_dssp EECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred EEcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence 9999999987643321 222345679999999999999999999999999999999999 999997643
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.5e-46 Score=404.04 Aligned_cols=203 Identities=26% Similarity=0.415 Sum_probs=176.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
++|.+.+.||+|+||+||+|+.. +|+.||||++.... ....++|.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999964 69999999987542 3345689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
||++|+|.+++.......+++...+.|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998776677899999999999999999999999 999999999999999999999999999875311
Q ss_pred CCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|||||++.+..|+.++||||+||++|||+||+.||....
T Consensus 179 -----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 179 -----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp -----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred -----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 122345679999999999999999999999999999999999999997543
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=398.17 Aligned_cols=205 Identities=29% Similarity=0.484 Sum_probs=172.0
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 620 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++..+++...+.||+|+||+||+|++++ .||||+++.. .....++|.+|++++++++|||||+++|++.+ +..+|
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 3455678888999999999999999753 6999998743 34456789999999999999999999999865 56899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
|||||++|+|.++++... .+++|..++.|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 109 VmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999997643 46999999999999999999999988 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.+ .........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+..
T Consensus 185 ~~-----~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~ 241 (307)
T 3omv_A 185 WS-----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp --------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CC-----cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence 22 1223345689999999999864 468999999999999999999999997654
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.3e-46 Score=401.26 Aligned_cols=204 Identities=27% Similarity=0.437 Sum_probs=176.0
Q ss_pred CCCCCccccccCceEEEEEEeC------CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++...+.||+|+||+||+|.+. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455788999999999999862 46899999997543 3346789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 003140 698 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~ 763 (845)
|||||++|+|.++|+... ...++|..++.|+.|||+||+|||+++ ||||||||+||||+++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999996532 246899999999999999999999998 999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 764 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+||+|||+|+.....+. ........||++|||||++.++.|+.++|||||||++|||+| |+.||.+..
T Consensus 184 ~Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~ 252 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252 (308)
T ss_dssp EEECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred EEECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence 99999999986543221 122344679999999999999999999999999999999999 899997643
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-45 Score=400.06 Aligned_cols=200 Identities=26% Similarity=0.425 Sum_probs=180.2
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcC
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~ 702 (845)
+.|+..+.||+|+||+||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56888899999999999999975 69999999987554455567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCC
Q 003140 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (845)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~ 782 (845)
++|+|.++++. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.....
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---- 223 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 223 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS----
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC----
Confidence 99999999975 35899999999999999999999999 999999999999999999999999999876432
Q ss_pred ccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 224 ---~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 224 ---VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp ---SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ---CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 122345689999999999999999999999999999999999999997643
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-45 Score=392.77 Aligned_cols=203 Identities=21% Similarity=0.361 Sum_probs=180.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+++..+|||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46889999999999999999964 79999999986432 233567999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++++. ..+++.....++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 999999999999765 35899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.........||+.|||||++.+..|+.++||||+||++|||+||+.||...+
T Consensus 187 -----~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 238 (311)
T 4aw0_A 187 -----KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238 (311)
T ss_dssp -----TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -----CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1122345689999999999999999999999999999999999999997543
No 8
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=401.42 Aligned_cols=201 Identities=25% Similarity=0.418 Sum_probs=181.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.+.|+..+.||+|+||.||+|... +|+.||||++........+.+.+|+++|++++|||||++++++.+.+..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 356889999999999999999975 6999999999765555566789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
|++|+|.++++.. .+++..+..++.||++||+|||+++ ||||||||+|||++.++.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-- 301 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-- 301 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence 9999999999653 5899999999999999999999999 9999999999999999999999999998764321
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|||||++.+..|+.++|||||||++|||++|+.||.+..
T Consensus 302 -----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 302 -----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp -----CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -----ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 22345689999999999999999999999999999999999999997643
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-44 Score=382.17 Aligned_cols=198 Identities=30% Similarity=0.510 Sum_probs=170.4
Q ss_pred CCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCeEEEEE
Q 003140 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQMLVY 699 (845)
Q Consensus 627 ~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~LV~ 699 (845)
...+.||+|+||+||+|.+. +++.||||++... .....++|.+|++++++++|||||++++++.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999975 6899999998643 33345679999999999999999999999865 34579999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEecCCcccCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~kl~DFGla~~~~~~ 778 (845)
|||++|+|.+++++. ..+++..+..++.||++||+|||+++ ++||||||||+|||++ +++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 999999999999764 46899999999999999999999875 5699999999999998 479999999999986431
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.......||+.|||||++.+ .|+.++|||||||++|||+||+.||....+
T Consensus 185 --------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~ 234 (290)
T 3fpq_A 185 --------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp --------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred --------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence 12345689999999998865 699999999999999999999999976543
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.9e-44 Score=388.13 Aligned_cols=201 Identities=23% Similarity=0.312 Sum_probs=172.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcC
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~ 702 (845)
+.|...++||+|+||+||+|+.. +|+.||||+++.... ..+|++++++++|||||++++++.+++..+||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999975 699999999875322 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEEecCCcccCCCCCCC
Q 003140 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~-~~kl~DFGla~~~~~~~~~ 781 (845)
++|+|.++++.. ..+++..+..++.||++||+|||+++ ||||||||+|||++.++ ++||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999765 35899999999999999999999998 99999999999999987 6999999999876532211
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. .........||+.|||||++.+..|+.++|||||||++|||+||+.||....
T Consensus 208 ~--~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~ 260 (336)
T 4g3f_A 208 K--SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred c--ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 0 0112234579999999999999999999999999999999999999997543
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-44 Score=374.33 Aligned_cols=198 Identities=25% Similarity=0.413 Sum_probs=163.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|++.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999964 79999999987543 223567999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+ +|+|.+++... ..+++.....++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 68999999764 46999999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~ 215 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE 215 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC
Confidence 22345679999999999998776 57999999999999999999999754
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.8e-44 Score=391.96 Aligned_cols=215 Identities=27% Similarity=0.456 Sum_probs=184.4
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEeCC------CcEEEEEEccCCCh-hhHHHHHHHHHHHHhcCC-CceeeE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHH-RNLVSL 685 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l~H-~nIv~l 685 (845)
+..++|++..++|.+.+.||+|+||+||+|.+.. ++.||||+++.... ...++|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3446778888999999999999999999998642 46899999976543 345789999999999965 899999
Q ss_pred EEEEeeC-CeEEEEEEcCCCCCHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 003140 686 VGYCDEE-GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 750 (845)
Q Consensus 686 ~g~~~~~-~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 750 (845)
+|+|.+. +..+||||||++|+|.++|+... ...++|..++.++.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9999765 56899999999999999997532 345899999999999999999999998 99999
Q ss_pred CCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CC
Q 003140 751 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 829 (845)
Q Consensus 751 Lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~ 829 (845)
|||+|||+++++.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~-----~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCC-----CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 99999999999999999999998764322 1122345678999999999999999999999999999999998 99
Q ss_pred CCCCCCC
Q 003140 830 QPISHGK 836 (845)
Q Consensus 830 ~Pf~~~~ 836 (845)
.||.+..
T Consensus 286 ~Pf~~~~ 292 (353)
T 4ase_A 286 SPYPGVK 292 (353)
T ss_dssp CSSTTCC
T ss_pred CCCCCCC
Confidence 9997643
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.5e-44 Score=385.67 Aligned_cols=201 Identities=27% Similarity=0.353 Sum_probs=170.9
Q ss_pred cCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++|++.+.||+|+||+||+|+.. .++.||||+++.... ....++.+|+++|++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57899999999999999999852 478999999875322 223468899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
|||||++|+|.+++++.. .+++..+..++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997653 5899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. ........||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+
T Consensus 179 ~-------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 179 H-------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C-------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 2 122345679999999999999999999999999999999999999997543
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.3e-43 Score=379.90 Aligned_cols=202 Identities=26% Similarity=0.372 Sum_probs=163.1
Q ss_pred CCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----eEEEEEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLVYE 700 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~LV~E 700 (845)
+|.+.+.||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+++ ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 466778999999999999998 689999999865322 1223345666677889999999999997654 5799999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
||++|+|.++++.. .++|..+.+++.|+|+||+|||++ ++++||||||||+|||+++++++||+|||+|+..
T Consensus 82 y~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 99999999999764 589999999999999999999987 2456999999999999999999999999999875
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
...... .........||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 159 ~~~~~~---~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 159 DSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp ETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred cCCCCc---eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 432210 11122345799999999999764 367899999999999999999887753
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.4e-42 Score=370.19 Aligned_cols=206 Identities=27% Similarity=0.426 Sum_probs=163.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--------
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-------- 693 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~-------- 693 (845)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+++.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999965 79999999987543 334567999999999999999999999986544
Q ss_pred ----eEEEEEEcCCCCCHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003140 694 ----EQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (845)
Q Consensus 694 ----~~~LV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~D 768 (845)
..++|||||++|+|.+++..... ...++..++.++.||++||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999976533 34567778899999999999999999 99999999999999999999999
Q ss_pred cCCcccCCCCCCCCcc-----ccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 769 FGLSRLAPVPDIEGIV-----PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 769 FGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
||+|+........... .....+...||+.|||||++.+..|+.++|||||||++|||++ ||...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~ 230 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ 230 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc
Confidence 9999876533211100 0112244679999999999999999999999999999999996 88643
No 16
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.1e-42 Score=373.04 Aligned_cols=295 Identities=29% Similarity=0.495 Sum_probs=238.8
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC-CCCcceEecCCCCCCCcceEeEEEecCCCCcc--cCCCCccCCCC
Q 003140 31 ITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT-SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSG--NLSPEIGRLSY 107 (845)
Q Consensus 31 ~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~-~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~--~~~~~l~~L~~ 107 (845)
.|++.|++||++||+++.++. .+++|..+++|| +.|.||+|...+ ...+|+.|+|+++++++ .+|+.|+.+++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~---~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCC---CCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 588999999999999998765 688998765554 359999996532 12489999999999999 89999999999
Q ss_pred ccEEEecC-CCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEcc
Q 003140 108 LTILDFMW-NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (845)
Q Consensus 108 L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (845)
|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|..+++|++|+|++|.+++.+|..+..+++|++|+|+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCC-CcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCC
Q 003140 187 NNSISGQIPPELSRLP-SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (845)
Q Consensus 187 ~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (845)
+|++++.+|..+..++ +|++|+|++|++++.+|..+..++ |++|+|++|++++ ..|..+..+++|+.|+|++|++++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG-DASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE-CCGGGCCTTSCCSEEECCSSEECC
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC-cCCHHHhcCCCCCEEECCCCceee
Confidence 9999988999998888 899999999999988888888887 9999999998887 577788888888888888888877
Q ss_pred CCCCCCCCCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCCCCCCCeEeccccc
Q 003140 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332 (845)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 332 (845)
.++.+..+++|++|++++|++++.+|..+.. .+|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 6666666666766666666666555544332 24555555555555554443 445555555555554
No 17
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.7e-41 Score=411.18 Aligned_cols=336 Identities=26% Similarity=0.393 Sum_probs=288.8
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCcceEecCCCCCCCcceEeEEEecCCCCccc---CC--------
Q 003140 31 ITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGN---LS-------- 99 (845)
Q Consensus 31 ~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~---~~-------- 99 (845)
.+.++|++||++||+++.|+. .+++|+.+++|| .|.||+|.. .+|+.|+|++++++|. ++
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C-~w~gv~C~~-------~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPC-TFDGVTCRD-------DKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGG-GSTTEEEET-------TEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCc-CCcceEECC-------CcEEEEECCCCCcCCccCccChhHhccCc
Confidence 335789999999999999877 889998766776 699999962 3899999999998886 33
Q ss_pred ---------------CCccCCCCccEEEecCCCCCCCCcc--cccccccchhhhccCCCCCCCCCCcc-CCCCccceeec
Q 003140 100 ---------------PEIGRLSYLTILDFMWNKISGSIPK--EIGNIKSLELLLLNGNELTGSLPEEL-GYLPKLDRIQI 161 (845)
Q Consensus 100 ---------------~~l~~L~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L 161 (845)
..|+.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|+|
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L 158 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDL 158 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEEC
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEEC
Confidence 5788889999999999999888887 88999999999999999988888776 78899999999
Q ss_pred ccccccCCCCcc---ccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcC
Q 003140 162 DQNYISGSLPKS---FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (845)
Q Consensus 162 s~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (845)
++|++++..|.. +.++++|++|++++|.+++..|. ..+++|++|+|++|++++.+|. ++.+++|++|+|++|++
T Consensus 159 s~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l 235 (768)
T 3rgz_A 159 SANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235 (768)
T ss_dssp CSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCC
T ss_pred CCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcC
Confidence 999998888777 78889999999999999877654 7889999999999999988877 99999999999999999
Q ss_pred CCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCc--cccCEEEccCCcCCCCcccc
Q 003140 239 EGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSN 316 (845)
Q Consensus 239 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~ 316 (845)
++ .+|..+.++++|++|+|++|++++..+.. .+++|++|++++|.+++.+|..... .+|+.|+|++|++++.+|..
T Consensus 236 ~~-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~ 313 (768)
T 3rgz_A 236 SG-DFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF 313 (768)
T ss_dssp CS-CHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG
T ss_pred CC-cccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH
Confidence 87 68889999999999999999999877766 8899999999999999999987654 58999999999999999999
Q ss_pred cCCCCCCCeEecccccCcccCChh-hhhhccCCCCcceEEEccCCCCC-CCCCCC-CCC-CCcEEEecCCccc
Q 003140 317 FSGLPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLT-NISGSF-NIP-PNVTVRLRGNPFC 385 (845)
Q Consensus 317 ~~~l~~L~~L~L~~N~l~~~ip~~-l~~l~~l~~~~l~~L~ls~N~l~-~i~~~~-~~~-~l~~l~l~~Np~~ 385 (845)
|+++++|++|+|++|+++|.+|.. +..+. +|+.|++++|+++ .+|..+ .++ .++.|++++|.+.
T Consensus 314 ~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~-----~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~ 381 (768)
T 3rgz_A 314 FGSCSLLESLALSSNNFSGELPMDTLLKMR-----GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381 (768)
T ss_dssp GGGCTTCCEEECCSSEEEEECCHHHHTTCT-----TCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEE
T ss_pred HhcCCCccEEECCCCcccCcCCHHHHhcCC-----CCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcC
Confidence 999999999999999999999976 66544 4558888888887 666665 344 7888888888765
No 18
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=371.19 Aligned_cols=204 Identities=26% Similarity=0.419 Sum_probs=173.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEee------CCe
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGE 694 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~------~~~ 694 (845)
++|++.+.||+|+||+||+|... +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999974 79999999987532 3345678999999999999999999998754 367
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.|||||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 7899999653 46999999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+...... .........||+.|||||++.+. .++.++||||+||++|||++|+.||.+.+
T Consensus 208 ~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~ 267 (398)
T 4b99_A 208 LCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267 (398)
T ss_dssp C----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred cccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence 6432111 12234567899999999998875 56999999999999999999999997543
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9e-41 Score=367.67 Aligned_cols=207 Identities=24% Similarity=0.375 Sum_probs=174.3
Q ss_pred HhcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 696 (845)
..++|++.+.||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.+..+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4578999999999999999999853 46889999986543 345788999999998 6999999999999999999
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEEecCCcccC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 775 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~-~~~kl~DFGla~~~ 775 (845)
+||||+++|+|.++++ .+++..+..++.|+++||+|||+++ ||||||||+|||++.+ +.+||+|||+|+..
T Consensus 97 lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 9999999999999983 4889999999999999999999999 9999999999999877 79999999999865
Q ss_pred CCCCCCCc---------------------cccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 776 PVPDIEGI---------------------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 776 ~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
........ ..........||+.|||||++.+. .|+.++||||+||++|||+||+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 43221100 001122345799999999999775 58999999999999999999999998
Q ss_pred CCCCc
Q 003140 834 HGKNI 838 (845)
Q Consensus 834 ~~~~~ 838 (845)
.+.+.
T Consensus 249 ~~~~~ 253 (361)
T 4f9c_A 249 KASDD 253 (361)
T ss_dssp CCSSH
T ss_pred CCCCH
Confidence 77654
No 20
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-40 Score=402.45 Aligned_cols=336 Identities=21% Similarity=0.288 Sum_probs=273.2
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCC------CCCCCCC------------cceEecCCCCCCCcceEeEEEe
Q 003140 28 DDSITDPIEVSALRSIKKSLVDDYSKLSNWNRG------DPCTSNW------------TGVLCFNTTMDDGYLHLRELQL 89 (845)
Q Consensus 28 ~~~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~------~~c~~~w------------~Gv~C~~~~~~~~~~~v~~L~L 89 (845)
..+.+...|++||++||+++.++ +|+.. ++|+|.| .||+|... .+|+.|+|
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~------~~V~~L~L 330 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN------GRVTGLSL 330 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT------SCEEEEEC
T ss_pred cccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCC------CCEEEEEC
Confidence 34455678999999999999775 66543 4654689 99999752 48999999
Q ss_pred cCCCCcccCCCCccCCCCccEEEe-cCCCCCCC-----------------------------------------------
Q 003140 90 LNLNLSGNLSPEIGRLSYLTILDF-MWNKISGS----------------------------------------------- 121 (845)
Q Consensus 90 ~~~~l~~~~~~~l~~L~~L~~L~L-~~N~l~~~----------------------------------------------- 121 (845)
++++|+|.+|++|++|++|++|+| ++|.++|.
T Consensus 331 s~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~ 410 (876)
T 4ecn_A 331 AGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINR 410 (876)
T ss_dssp TTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHT
T ss_pred ccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhh
Confidence 999999999999999999999999 77765444
Q ss_pred -----------------------------CcccccccccchhhhccCCCCCC-----------------CCCCccC--CC
Q 003140 122 -----------------------------IPKEIGNIKSLELLLLNGNELTG-----------------SLPEELG--YL 153 (845)
Q Consensus 122 -----------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l 153 (845)
+|..|+++++|++|+|++|+|++ .+|..++ ++
T Consensus 411 ~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 411 NPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp CTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred CccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccC
Confidence 88899999999999999999998 3999988 99
Q ss_pred CccceeecccccccCCCCccccCccCCCEEEccCCC-CCC-CCccccCCCC-------CcceeeccccccccCCCc--cc
Q 003140 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRLP-------SLVHMLLDNNNLTGYLPP--EL 222 (845)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~l 222 (845)
++|++|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .+
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 999999999999999999999999999999999998 988 7887666555 9999999999999 8888 89
Q ss_pred CCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCC-ccEEEcccccCCcCCCCCCCcc---c
Q 003140 223 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSL---N 298 (845)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~ip~~~~~~---~ 298 (845)
+.+++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++..+..+..+++ |+.|+|++|.++ .+|..+... +
T Consensus 570 ~~L~~L~~L~Ls~N~l~--~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR--HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC--BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc--cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 99999999999999998 567 899999999999999999966667888888 999999999998 777665443 4
Q ss_pred cCEEEccCCcCCCCccccc---C--CCCCCCeEecccccCcccCChhhh-hhccCCCCcceEEEccCCCCCCCCCCC-CC
Q 003140 299 ITTIKLSNNKLTGTIPSNF---S--GLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSF-NI 371 (845)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~ip~~l~-~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~ 371 (845)
|+.|+|++|++++.+|... . .+++|+.|+|++|+++ .+|..+. .+ ++|+.|+|++|+|+.+|... ..
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l-----~~L~~L~Ls~N~L~~ip~~~~~~ 719 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATG-----SPISTIILSNNLMTSIPENSLKP 719 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTT-----CCCSEEECCSCCCSCCCTTSSSC
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccC-----CCCCEEECCCCcCCccChHHhcc
Confidence 8888888888887665432 2 3347778888888887 6676654 23 23446666666666666543 11
Q ss_pred --------CCCcEEEecCCccc
Q 003140 372 --------PPNVTVRLRGNPFC 385 (845)
Q Consensus 372 --------~~l~~l~l~~Np~~ 385 (845)
+.++.|+|++|.+.
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC
T ss_pred ccccccccCCccEEECCCCCCc
Confidence 15666666666654
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-40 Score=396.63 Aligned_cols=338 Identities=22% Similarity=0.296 Sum_probs=288.9
Q ss_pred CCCCHHHHHHHHHHHHhccCCC-C-------CCCCCCCCCCCCCCC---cceEecCCCCCCCcceEeEEEecCCCCcccC
Q 003140 30 SITDPIEVSALRSIKKSLVDDY-S-------KLSNWNRGDPCTSNW---TGVLCFNTTMDDGYLHLRELQLLNLNLSGNL 98 (845)
Q Consensus 30 ~~~~~~~~~al~~~k~~~~~~~-~-------~l~~W~~~~~c~~~w---~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~ 98 (845)
+..+..|+.||.++++++.++. . ...+|+...+|| .| .||+|... .+|+.|+|++++++|.+
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~------~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN------GRVTGLSLEGFGASGRV 97 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT------CCEEEEECTTSCCEEEE
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC------CCEEEEEecCcccCCcC
Confidence 3445689999999999987542 1 234798776665 69 99999643 48999999999999999
Q ss_pred CCCccCCCCccEEEecCCC-------------------------------------------------------------
Q 003140 99 SPEIGRLSYLTILDFMWNK------------------------------------------------------------- 117 (845)
Q Consensus 99 ~~~l~~L~~L~~L~L~~N~------------------------------------------------------------- 117 (845)
|++|++|++|++|+|++|.
T Consensus 98 p~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~ 177 (636)
T 4eco_A 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177 (636)
T ss_dssp CGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred ChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence 9999999999999999884
Q ss_pred -----------------CCCCCcccccccccchhhhccCCCCCCC-----------------CCCccC--CCCccceeec
Q 003140 118 -----------------ISGSIPKEIGNIKSLELLLLNGNELTGS-----------------LPEELG--YLPKLDRIQI 161 (845)
Q Consensus 118 -----------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L 161 (845)
++| +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L 256 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEe
Confidence 445 888999999999999999999986 999999 9999999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCC-CCC-CCccccCCC------CCcceeeccccccccCCCc--ccCCCCCCcEE
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRL------PSLVHMLLDNNNLTGYLPP--ELSELPKLLIL 231 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L 231 (845)
++|++.+.+|..+.++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|++|
T Consensus 257 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp ECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred cCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 9999999999999999999999999998 998 889888876 99999999999999 8888 89999999999
Q ss_pred EccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCC-ccEEEcccccCCcCCCCCCCcc---ccCEEEccCC
Q 003140 232 QLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSL---NITTIKLSNN 307 (845)
Q Consensus 232 ~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~-L~~L~Ls~N~l~~~ip~~~~~~---~L~~L~Ls~N 307 (845)
+|++|+++| .+| .+.++++|+.|+|++|+++..+..+..+++ |+.|++++|.++ .+|..+... +|+.|+|++|
T Consensus 336 ~L~~N~l~g-~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 336 ECLYNQLEG-KLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp ECCSCCCEE-ECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred eCcCCcCcc-chh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 999999997 577 899999999999999999977777888988 999999999999 788765443 6999999999
Q ss_pred cCCCCcccccC-------CCCCCCeEecccccCcccCChhhhh-hccCCCCcceEEEccCCCCCCCCCCC-C-CC-----
Q 003140 308 KLTGTIPSNFS-------GLPRLQRLFIANNSLSGSIPSSIWQ-SRTLNATETFILDFQNNNLTNISGSF-N-IP----- 372 (845)
Q Consensus 308 ~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~ip~~l~~-l~~l~~~~l~~L~ls~N~l~~i~~~~-~-~~----- 372 (845)
++++.+|..|. .+++|++|+|++|+++ .+|..+.. +. .|+.|+|++|+|+.+|... . ..
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~-----~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~ 486 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGS-----PLSSINLMGNMLTEIPKNSLKDENENFKN 486 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTC-----CCSEEECCSSCCSBCCSSSSEETTEECTT
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCC-----CCCEEECCCCCCCCcCHHHhccccccccc
Confidence 99999998888 8889999999999998 67766543 33 4557888888888777654 2 22
Q ss_pred --CCcEEEecCCccc
Q 003140 373 --PNVTVRLRGNPFC 385 (845)
Q Consensus 373 --~l~~l~l~~Np~~ 385 (845)
.++.|++++|.+.
T Consensus 487 l~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 487 TYLLTSIDLRFNKLT 501 (636)
T ss_dssp GGGCCEEECCSSCCC
T ss_pred cCCccEEECcCCcCC
Confidence 6777888877765
No 22
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.2e-40 Score=379.17 Aligned_cols=198 Identities=27% Similarity=0.387 Sum_probs=171.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHH---HHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFL---TEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~---~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... .....+. .++++++.++|||||++++++.+.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57889999999999999999975 699999999864221 1222333 3466777889999999999999999999
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
||||||+||+|.+++.+. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+...
T Consensus 269 lVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999765 35899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.. ......||+.|||||++.. ..|+.++||||+||++|||++|+.||.+.
T Consensus 344 ~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 344 KK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp SC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred CC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 1234689999999999975 57999999999999999999999999753
No 23
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.5e-39 Score=377.61 Aligned_cols=201 Identities=25% Similarity=0.408 Sum_probs=181.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcC
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~ 702 (845)
++|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|+++|++++|||||++++++.+.+..+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 68999999999999999999975 79999999998766666778999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC--CcEEEEecCCcccCCCCCC
Q 003140 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~--~~~kl~DFGla~~~~~~~~ 780 (845)
++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 237 ~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~--- 309 (573)
T 3uto_A 237 SGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP--- 309 (573)
T ss_dssp CCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT---
T ss_pred CCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC---
Confidence 999999999653 346899999999999999999999999 9999999999999854 8999999999987642
Q ss_pred CCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|||||++.+..|+.++||||+||++|||++|+.||.+..
T Consensus 310 -----~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~ 360 (573)
T 3uto_A 310 -----KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN 360 (573)
T ss_dssp -----TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred -----CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 223345679999999999999999999999999999999999999997544
No 24
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.4e-38 Score=364.01 Aligned_cols=331 Identities=17% Similarity=0.212 Sum_probs=279.1
Q ss_pred CCCCCCCcceEecCCCC---CCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCC-cccccccccchhhh
Q 003140 61 DPCTSNWTGVLCFNTTM---DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLL 136 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~---~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 136 (845)
..|.|.+..|.|..... +....+++.|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ +..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 34543344488865432 223468999999999999998999999999999999999998655 56799999999999
Q ss_pred ccCCCCCCCCCCccCCCCccceeecccccccCCCCcc--ccCccCCCEEEccCCCCCCCCccc-cCCCCCcceeeccccc
Q 003140 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIPPE-LSRLPSLVHMLLDNNN 213 (845)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~ 213 (845)
|++|++++..|..|+++++|++|+|++|++++.++.. +..+++|++|+|++|++++..|.. +..+++|++|++++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866554 999999999999999999887876 8999999999999999
Q ss_pred cccCCCcccCCC----------------------------------CCCcEEEccCCcCCCCCCcccccc----------
Q 003140 214 LTGYLPPELSEL----------------------------------PKLLILQLDNNNFEGTTIPASYSN---------- 249 (845)
Q Consensus 214 l~~~~p~~l~~l----------------------------------~~L~~L~Ls~N~l~~~~~p~~~~~---------- 249 (845)
+++..+..+..+ ++|++|+|++|++++ ..|..+..
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE-SMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH-HHHHHHHHHTTTCCEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc-cchhhhhccccccceeeE
Confidence 998887766543 678888888888765 23333221
Q ss_pred -----------------------------CCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCC-ccc
Q 003140 250 -----------------------------MSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRL-SLN 298 (845)
Q Consensus 250 -----------------------------l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~ 298 (845)
.++|+.|++++|++++.++. +..+++|+.|++++|.+++..|..+. ..+
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 25789999999999887664 88999999999999999987776654 458
Q ss_pred cCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcE
Q 003140 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVT 376 (845)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~ 376 (845)
|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+. +|+.|+|++|+|++++... .++.++.
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP-----NLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccc-----cccEEECCCCccccCCHhHhccCCcccE
Confidence 99999999999999999999999999999999999988898887655 4569999999999999864 5899999
Q ss_pred EEecCCcccccCC-CccccCCC
Q 003140 377 VRLRGNPFCLNTN-AEQFCGSH 397 (845)
Q Consensus 377 l~l~~Np~~c~~~-~~~~~~~~ 397 (845)
|++++|||.|+|+ ..++..|.
T Consensus 400 L~l~~N~l~~~~~~~~~l~~~l 421 (455)
T 3v47_A 400 IWLHTNPWDCSCPRIDYLSRWL 421 (455)
T ss_dssp EECCSSCBCCCTTTTHHHHHHH
T ss_pred EEccCCCcccCCCcchHHHHHH
Confidence 9999999999998 44454554
No 25
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=357.49 Aligned_cols=329 Identities=22% Similarity=0.237 Sum_probs=290.9
Q ss_pred CCCC--CCcceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhh
Q 003140 62 PCTS--NWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELL 135 (845)
Q Consensus 62 ~c~~--~w~Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 135 (845)
.|.| .|..|.|...... ....+++.|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 85 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTL 85 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEE
Confidence 4544 4788999765432 234579999999999999889999999999999999999999889999999999999
Q ss_pred hccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccc
Q 003140 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (845)
Q Consensus 136 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (845)
+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|++|+|++|+++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999999766677999999999999999999989999999999999999999999888899999999999999999999
Q ss_pred cCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC-CCCCCCCCccEEEcccccCCcCCCC-C
Q 003140 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM-PDLSRIPNLGYLDLSSNQLNGSIPP-G 293 (845)
Q Consensus 216 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~l~~l~~L~~L~Ls~N~l~~~ip~-~ 293 (845)
+..+..|..+++|+.|+|++|.+++ ..+..|..+++|+.|++++|.+.+.. +......+|+.|++++|.++ .+|. .
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~ 243 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLA 243 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCE-ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHH
T ss_pred ccChhHhcccCCCcEEeCCCCcCcE-eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHH
Confidence 8777789999999999999999987 56778999999999999999876644 44556669999999999999 5553 2
Q ss_pred -CCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--C
Q 003140 294 -RLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--N 370 (845)
Q Consensus 294 -~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~ 370 (845)
....+|+.|+|++|.+++..+..|.++++|++|+|++|++++..|..+..+.. |+.|+|++|+|+.++... .
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-----L~~L~L~~N~l~~~~~~~~~~ 318 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY-----LRVLNVSGNQLTTLEESVFHS 318 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT-----CCEEECCSSCCSCCCGGGBSC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc-----CCEEECCCCcCceeCHhHcCC
Confidence 23458999999999999998999999999999999999999988988876554 569999999999998864 5
Q ss_pred CCCCcEEEecCCcccccCCCccccCCC
Q 003140 371 IPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 371 ~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
++.++.|++++|||.|+|...|+..+.
T Consensus 319 l~~L~~L~l~~N~l~c~c~~~~~~~~~ 345 (477)
T 2id5_A 319 VGNLETLILDSNPLACDCRLLWVFRRR 345 (477)
T ss_dssp GGGCCEEECCSSCEECSGGGHHHHTTT
T ss_pred CcccCEEEccCCCccCccchHhHHhhh
Confidence 889999999999999999998887654
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-36 Score=328.19 Aligned_cols=201 Identities=24% Similarity=0.424 Sum_probs=180.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999996 47899999998765555667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999764 4889999999999999999999998 9999999999999999999999999998654321
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 171 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 220 (297)
T 3fxz_A 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (297)
T ss_dssp -----CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -----cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 12334579999999999999999999999999999999999999997654
No 27
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.8e-37 Score=350.59 Aligned_cols=213 Identities=26% Similarity=0.316 Sum_probs=183.4
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh---hHHHHHHHHHHHHhcCCCceeeEEEEE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~---~~~~~~~Ei~~l~~l~H~nIv~l~g~~ 689 (845)
+.+.++....++|+..+.||+|+||+||+|... +++.||||+++..... ..+.+.+|.++++.++||||+++++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345566677889999999999999999999976 5889999998642211 123488999999999999999999999
Q ss_pred eeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEec
Q 003140 690 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (845)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DF 769 (845)
.+.+..++|||||++|+|.++++.. ...+++..++.++.|++.||+|||+.+ ||||||||+|||++.++.+||+||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999999763 346899999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCCCCCCccccceeecccCCCCccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+|+...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 220 Gla~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 220 GSCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp TTCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 9997654321 22234467999999999987 5678999999999999999999999997644
No 28
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.1e-37 Score=337.97 Aligned_cols=221 Identities=46% Similarity=0.831 Sum_probs=192.0
Q ss_pred ccCCccccchHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeE
Q 003140 607 KIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSL 685 (845)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~-~~~~~~~Ei~~l~~l~H~nIv~l 685 (845)
.......+++.++....++|...+.||+|+||.||+|...+|+.||||++...... ....+.+|++++++++||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 34456678999999999999999999999999999999888999999998764322 23478999999999999999999
Q ss_pred EEEEeeCCeEEEEEEcCCCCCHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc
Q 003140 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (845)
Q Consensus 686 ~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~ 763 (845)
++++.+.+..++||||+++|+|.++++... ...+++..+..++.|+++||+|||+.+.++|+||||||+|||++.++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence 999999999999999999999999998753 345999999999999999999999993334999999999999999999
Q ss_pred EEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 764 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
+||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 173 ~kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp EEECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred EEeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 9999999998764322 223344569999999999998899999999999999999999999995
No 29
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.5e-37 Score=336.75 Aligned_cols=212 Identities=49% Similarity=0.834 Sum_probs=186.8
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
+.++...+++|+..+.||+|+||.||+|.+.+|+.||||++........+++.+|++++++++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 33445567899999999999999999999888999999998876666678899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 696 MLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999997643 346899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.....+ .........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 188 ~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~ 244 (321)
T 2qkw_B 188 KGTELD-----QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244 (321)
T ss_dssp ECSSSS-----CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred cccccc-----ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence 653221 112233456899999999999999999999999999999999999999753
No 30
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-36 Score=331.60 Aligned_cols=201 Identities=29% Similarity=0.440 Sum_probs=177.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788999999999999999997 57999999998653 3344567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 999999999999765 35899999999999999999999998 999999999999999999999999999765321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+..+. .++||||+||++|||++|+.||....
T Consensus 168 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 218 (328)
T 3fe3_A 168 -------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218 (328)
T ss_dssp -------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence 123456799999999999888765 79999999999999999999997543
No 31
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.5e-37 Score=373.17 Aligned_cols=302 Identities=32% Similarity=0.502 Sum_probs=271.4
Q ss_pred cceEeEEEecCCCCcccCCCCccCCC-CccEEEecCCCCCCCCcccccc--cccchhhhccCCCCCCCCCCccCCCCccc
Q 003140 81 YLHLRELQLLNLNLSGNLSPEIGRLS-YLTILDFMWNKISGSIPKEIGN--IKSLELLLLNGNELTGSLPEELGYLPKLD 157 (845)
Q Consensus 81 ~~~v~~L~L~~~~l~~~~~~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 157 (845)
..+++.|++++|.+++.+|..+..++ +|++|+|++|++++.+|..+.. +++|++|+|++|++++.+|..+.++++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 35789999999999999999999987 9999999999999988888877 88999999999999999999999999999
Q ss_pred eeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCc
Q 003140 158 RIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNN 237 (845)
Q Consensus 158 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 237 (845)
+|+|++|++++.+|..+.++++|+.|++++|++++.+|..+..+++|++|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 501 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCCc--------------------
Q 003140 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-------------------- 296 (845)
Q Consensus 238 l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-------------------- 296 (845)
+++ .+|..++++++|+.|+|++|++++..| .+..+++|+.|++++|+++|.+|..++.
T Consensus 502 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (768)
T 3rgz_A 502 LTG-EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580 (768)
T ss_dssp CCS-CCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEEC
T ss_pred cCC-cCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccc
Confidence 997 689999999999999999999998666 5889999999999999999888864321
Q ss_pred ---------------------------------------------------cccCEEEccCCcCCCCcccccCCCCCCCe
Q 003140 297 ---------------------------------------------------LNITTIKLSNNKLTGTIPSNFSGLPRLQR 325 (845)
Q Consensus 297 ---------------------------------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 325 (845)
.+|+.|||++|+++|.+|..++++++|+.
T Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 660 (768)
T 3rgz_A 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660 (768)
T ss_dssp CSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCE
T ss_pred ccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCE
Confidence 25889999999999999999999999999
Q ss_pred EecccccCcccCChhhhhhccCCCCcceEEEccCCCCC-CCCCCC-CCCCCcEEEecCCcccccC
Q 003140 326 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-NISGSF-NIPPNVTVRLRGNPFCLNT 388 (845)
Q Consensus 326 L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~-~i~~~~-~~~~l~~l~l~~Np~~c~~ 388 (845)
|+|++|+++|.+|..+..+..| +.|||++|+|+ .+|..+ .++.+..|++++|++...-
T Consensus 661 L~Ls~N~l~g~ip~~l~~L~~L-----~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 720 (768)
T 3rgz_A 661 LNLGHNDISGSIPDEVGDLRGL-----NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTC-----CEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEEC
T ss_pred EeCcCCccCCCCChHHhCCCCC-----CEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccC
Confidence 9999999999999999877655 59999999998 666666 5899999999999987543
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.2e-36 Score=327.96 Aligned_cols=212 Identities=25% Similarity=0.361 Sum_probs=186.0
Q ss_pred cccchHHHHHHhcC----------CCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCC
Q 003140 612 RSFTYGEMALATNN----------FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 680 (845)
Q Consensus 612 ~~~~~~~~~~~~~~----------f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~ 680 (845)
..++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777776654 666789999999999999976 7999999999876666677899999999999999
Q ss_pred ceeeEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC
Q 003140 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 760 (845)
Q Consensus 681 nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~ 760 (845)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 999999999999999999999999999999864 35899999999999999999999998 999999999999999
Q ss_pred CCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 761 KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 761 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
++.+||+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~ 245 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDV-------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS 245 (321)
T ss_dssp TCCEEECCCTTCEECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCcEEEeeeeeeeecccCc-------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999998654321 11234579999999999999999999999999999999999999997543
No 33
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.9e-36 Score=331.52 Aligned_cols=201 Identities=26% Similarity=0.346 Sum_probs=177.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|+..+.||+|+||+||+|... +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999975 68999999986532 233567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp ECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999764 35889999999999999999999998 999999999999999999999999999864321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 159 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 209 (337)
T 1o6l_A 159 ------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 209 (337)
T ss_dssp ------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC
Confidence 122345679999999999999999999999999999999999999997543
No 34
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.9e-37 Score=344.29 Aligned_cols=209 Identities=22% Similarity=0.310 Sum_probs=180.3
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
..++....++|...+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566788999999999999999999975 589999999864211 122358899999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGl 771 (845)
.+..++||||+++|+|.++++.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999653 4889999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+
T Consensus 215 a~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 215 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp CEECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred eEeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 98754321 12234567999999999998655 7899999999999999999999997543
No 35
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=323.89 Aligned_cols=209 Identities=24% Similarity=0.426 Sum_probs=180.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|...+.||+|+||.||+|... +++.||+|++........+.|.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356788899999999999999975 6899999998776777778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999764 346899999999999999999999999 999999999999999999999999999876432211
Q ss_pred Ccc-------ccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 782 GIV-------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 782 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
... .........||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~ 225 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence 000 011112457999999999999999999999999999999999999998653
No 36
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.4e-36 Score=353.69 Aligned_cols=328 Identities=20% Similarity=0.231 Sum_probs=215.1
Q ss_pred ceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCC
Q 003140 69 GVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (845)
Q Consensus 69 Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (845)
.+.|...... +...+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp EEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 4667543221 223567777888777777777777777777777777777777667777777777777777777776
Q ss_pred CCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCC-CCccccCCCCCcceeeccccccccCCCcc--
Q 003140 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPE-- 221 (845)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-- 221 (845)
..|..|+++++|++|+|++|++++..+..+.++++|++|++++|.+++ .+|..++++++|++|+|++|++++..+..
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 667777777777777777777776665667777777777777777664 45666666666666666666554332211
Q ss_pred --------------------------------------------------------------------------------
Q 003140 222 -------------------------------------------------------------------------------- 221 (845)
Q Consensus 222 -------------------------------------------------------------------------------- 221 (845)
T Consensus 175 ~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~ 254 (606)
T 3vq2_A 175 FLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSI 254 (606)
T ss_dssp HHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGG
T ss_pred hhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003140 222 -------------------------------------------------------------------------------- 221 (845)
Q Consensus 222 -------------------------------------------------------------------------------- 221 (845)
T Consensus 255 ~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~ 334 (606)
T 3vq2_A 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT 334 (606)
T ss_dssp GTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEE
T ss_pred hhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceee
Confidence
Q ss_pred -----------cCCCCCCcEEEccCCcCCCC------------------------CCccccccCCCccEEEcccCCCCCC
Q 003140 222 -----------LSELPKLLILQLDNNNFEGT------------------------TIPASYSNMSKLLKLSLRNCSLQGP 266 (845)
Q Consensus 222 -----------l~~l~~L~~L~Ls~N~l~~~------------------------~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (845)
+..+++|++|+|++|++++. .+|..+.++++|+.|++++|++++.
T Consensus 335 l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 335 LTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp EESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEEST
T ss_pred ccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCc
Confidence 01122333333333333221 1223344445555555555555444
Q ss_pred CC--C------------------------CCCCCCccEEEcccccCCcC-CCCCCC-ccccCEEEccCCcCCCCcccccC
Q 003140 267 MP--D------------------------LSRIPNLGYLDLSSNQLNGS-IPPGRL-SLNITTIKLSNNKLTGTIPSNFS 318 (845)
Q Consensus 267 ~~--~------------------------l~~l~~L~~L~Ls~N~l~~~-ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~ 318 (845)
++ . +..+++|+.|++++|.+++. +|..+. ..+|+.|+|++|++++..|..|.
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 33 2 44555555555555555542 343332 23677777777777777777777
Q ss_pred CCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCC-CCcEEEecCCcccccCCCccccCC
Q 003140 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIP-PNVTVRLRGNPFCLNTNAEQFCGS 396 (845)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~~-~l~~l~l~~Np~~c~~~~~~~~~~ 396 (845)
++++|++|+|++|++++.+|..+..+. +|+.|++++|+|+.+|..+ .++ .+..+++++|||.|+|+..+|..|
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLY-----SLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCT-----TCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCC-----cCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 777777777777777777777766544 4569999999999999886 476 599999999999999999999999
Q ss_pred CCCCC
Q 003140 397 HSDDD 401 (845)
Q Consensus 397 ~~~~~ 401 (845)
.....
T Consensus 570 l~~~~ 574 (606)
T 3vq2_A 570 VKEQK 574 (606)
T ss_dssp TTTSS
T ss_pred HHcCc
Confidence 85543
No 37
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=342.68 Aligned_cols=213 Identities=28% Similarity=0.315 Sum_probs=183.1
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~ 689 (845)
+.+.+.....++|+..+.||+|+||+||++... +|+.||||+++.... ...+.+.+|.+++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 344556667789999999999999999999975 799999999865321 1223588999999999999999999999
Q ss_pred eeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEec
Q 003140 690 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (845)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DF 769 (845)
.+.+..++||||+++|+|.+++++.. ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997643 36899999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCCCCCCccccceeecccCCCCccchhhhc-------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+++...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 207 Gla~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 207 GSCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp TTCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 9998754321 11223467999999999987 4578999999999999999999999997644
No 38
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.7e-36 Score=334.02 Aligned_cols=205 Identities=28% Similarity=0.507 Sum_probs=177.4
Q ss_pred hcCCCCCccccccCceEEEEEEe--------CCCcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL--------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~--------~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~ 692 (845)
.++|.+.+.||+|+||.||+|.+ .++..||||+++... ....+++.+|+++++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788899999999999999985 245689999997643 33456899999999999 899999999999999
Q ss_pred CeEEEEEEcCCCCCHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 003140 693 GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (845)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl 758 (845)
+..++||||+++|+|.++++... ...+++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997643 245899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 759 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
+.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCT-----TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCCEEEccccCCcccCcccc-----eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999986643221 111233457789999999999999999999999999999999 99999754
No 39
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=334.07 Aligned_cols=204 Identities=26% Similarity=0.410 Sum_probs=174.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 695 (845)
...++|.+.+.||+|+||+||+|... +|+.||||+++... ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999975 68999999987532 23346688999999998 799999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++.. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+..
T Consensus 100 ~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence 9999999999999999765 35899999999999999999999998 999999999999999999999999999854
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 175 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 175 ICN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp CC----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 321 222345679999999999998899999999999999999999999997543
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=331.47 Aligned_cols=204 Identities=24% Similarity=0.396 Sum_probs=170.7
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
..++|.+.+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 347889999999999999999996 4799999999875432 23457899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997643 5899999999999999999999998 9999999999999999999999999987643221
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 214 (347)
T 3zgw_A 163 ------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214 (347)
T ss_dssp ---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 122344579999999999988775 899999999999999999999997543
No 41
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=336.18 Aligned_cols=204 Identities=19% Similarity=0.231 Sum_probs=176.1
Q ss_pred HHhcCCCCCccccccCceEEEEEE------eCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC---CCceeeEEEEEee
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGI------LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDE 691 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~------~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~g~~~~ 691 (845)
...++|.+.+.||+|+||.||+|. ..+++.||||+++... ..++.+|++++++++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345778889999999999999994 4468999999997643 456778888888886 9999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------- 760 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~-------- 760 (845)
.+..++||||+++|+|.++++.. ....+++..++.++.||++||+|||+.+ ||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999752 3457999999999999999999999998 999999999999998
Q ss_pred ---CCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 761 ---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 761 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++.+||+|||+|+...... .........||.+|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFP-----KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSC-----TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred ccccCCEEEeeCchhhhhhccC-----CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 8999999999997543111 123345567999999999999999999999999999999999999999643
No 42
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.2e-36 Score=322.15 Aligned_cols=203 Identities=28% Similarity=0.429 Sum_probs=174.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 367889999999999999999965 68999999885432 33356899999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++.... ++++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999997653 5899999999999999999999998 999999999999999999999999999865422
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. ........||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 165 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 165 S------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp ----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred c------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 112234568999999999999999999999999999999999999997644
No 43
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5e-36 Score=325.64 Aligned_cols=198 Identities=25% Similarity=0.427 Sum_probs=176.8
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|..+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57888999999999999999975 69999999987532 223567889999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999764 35899999999999999999999998 99999999999999999999999999986532
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 159 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 159 --------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp --------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 1234579999999999999999999999999999999999999997643
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.3e-36 Score=328.98 Aligned_cols=201 Identities=27% Similarity=0.384 Sum_probs=177.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|.+.+.||+|+||.||+|... +|+.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467889999999999999999975 6899999998754322 356899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEecCC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~----~~kl~DFGl 771 (845)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 46899999999999999999999998 99999999999998877 799999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus 166 a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~ 222 (361)
T 2yab_A 166 AHEIEDG--------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222 (361)
T ss_dssp CEECCTT--------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred ceEcCCC--------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876432 12234569999999999999999999999999999999999999997543
No 45
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-36 Score=327.18 Aligned_cols=212 Identities=36% Similarity=0.577 Sum_probs=173.2
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~ 693 (845)
..++....++|.+.+.||+|+||.||+|.. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 334445567899999999999999999987 68899999987543 334568999999999999999999999999999
Q ss_pred eEEEEEEcCCCCCHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla 772 (845)
..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 99999999999999999976432 34899999999999999999999875 45999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 187 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~ 243 (309)
T 3p86_A 187 RLKAST-------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243 (309)
T ss_dssp ----------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccccc-------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 754321 112334578999999999999999999999999999999999999997543
No 46
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5e-36 Score=334.33 Aligned_cols=200 Identities=25% Similarity=0.392 Sum_probs=175.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L 697 (845)
.++|.+.+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467888999999999999999975 588999999875322 2234578899999887 89999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|..++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 131 V~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999764 35899999999999999999999999 99999999999999999999999999985322
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 206 ~-------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 206 P-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp T-------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred C-------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 1 2223456799999999999999999999999999999999999999963
No 47
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6e-36 Score=328.41 Aligned_cols=205 Identities=25% Similarity=0.422 Sum_probs=178.0
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCe
Q 003140 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (845)
Q Consensus 620 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~ 694 (845)
....++|...+.||+|+||.||+|... +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345578999999999999999999975 68999999987532 23345688899999887 89999999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999999764 35899999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 168 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (345)
T 1xjd_A 168 NMLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222 (345)
T ss_dssp CCCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 43211 12345679999999999999999999999999999999999999997543
No 48
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-35 Score=323.03 Aligned_cols=201 Identities=21% Similarity=0.341 Sum_probs=178.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 367889999999999999999975 68999999987543 3456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~--~~~~kl~DFGla~~~~~~~ 779 (845)
+++|+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999653 346899999999999999999999998 999999999999987 789999999999876422
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 207 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred -------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC
Confidence 22344578999999999998889999999999999999999999997643
No 49
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.3e-35 Score=332.36 Aligned_cols=211 Identities=21% Similarity=0.241 Sum_probs=180.4
Q ss_pred hcCCCCCcccccc--CceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 623 TNNFNSSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 623 ~~~f~~~~~LG~G--~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
.++|.+.+.||+| +||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4678889999999 99999999976 79999999987532 3345678899999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++.......+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998776667999999999999999999999998 99999999999999999999999999865432
Q ss_pred CCCCCccccceeecccCCCCccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
................||..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 241 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 241 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 11111111112233478999999999987 679999999999999999999999997543
No 50
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-35 Score=326.62 Aligned_cols=199 Identities=25% Similarity=0.387 Sum_probs=176.2
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 698 (845)
++|...+.||+|+||.||+|... +++.||+|+++... ....+.+.+|.++++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888999999999999999975 68999999987532 23346688999999988 899999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 9999999999999764 35899999999999999999999998 999999999999999999999999999864321
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 164 -------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp -------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 1223456799999999999999999999999999999999999999964
No 51
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.2e-36 Score=344.60 Aligned_cols=204 Identities=28% Similarity=0.425 Sum_probs=181.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
..++|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467888999999999999999975 79999999986532 2335678999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998766667999999999999999999999998 99999999999999999999999999987642
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 339 ~--------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 339 G--------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp T--------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred C--------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 2 12334579999999999999899999999999999999999999998654
No 52
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=330.77 Aligned_cols=200 Identities=27% Similarity=0.387 Sum_probs=176.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367888999999999999999965 68999999986432 23356789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999753 45899999999999999999999999 999999999999999999999999999875422
Q ss_pred CCCCccccceeecccCCCCccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 169 --------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 169 --------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp --------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred --------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 22345679999999999864 45899999999999999999999999743
No 53
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-35 Score=323.98 Aligned_cols=202 Identities=26% Similarity=0.399 Sum_probs=168.7
Q ss_pred hcCCCCCccccccCceEEEEEEe----CCCcEEEEEEccCCC----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~----~~g~~vAVK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 694 (845)
.++|.+.+.||+|+||.||++.. .+|+.||+|+++... ......+.+|++++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999986 478999999987643 2234568899999999999999999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999764 35889999999999999999999998 99999999999999999999999999975
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 171 SIHD-------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ---------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccC-------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 4321 112334579999999999999999999999999999999999999997643
No 54
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=324.83 Aligned_cols=206 Identities=30% Similarity=0.455 Sum_probs=175.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
.++|.+.+.||+|+||.||+|.+. .+..||||+++.. .....++|.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888899999999999999974 4556999999764 33445789999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999654 346899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 204 ~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 259 (325)
T 3kul_A 204 DPD----AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT 259 (325)
T ss_dssp -------CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred Ccc----ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence 221 1122233456788999999998999999999999999999999 999996543
No 55
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.5e-35 Score=324.02 Aligned_cols=206 Identities=21% Similarity=0.327 Sum_probs=177.8
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|.+.+.||+|+||.||+|.. .+|+.||||++..... .+++.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36788899999999999999996 5789999999875432 24688999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEEecCCcccC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 775 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~-----~kl~DFGla~~~ 775 (845)
|+ +|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999764 457999999999999999999999998 999999999999998887 999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~ 220 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 220 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 443322111122234567999999999999999999999999999999999999999764
No 56
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-35 Score=326.29 Aligned_cols=201 Identities=26% Similarity=0.436 Sum_probs=177.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999975 68999999987543 334567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCCcccCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 776 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~---~~~kl~DFGla~~~~ 776 (845)
||+++|+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++...
T Consensus 108 e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 999999999999653 46899999999999999999999998 9999999999999865 459999999998654
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 183 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 234 (362)
T 2bdw_A 183 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 234 (362)
T ss_dssp TCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 221 1234579999999999999999999999999999999999999997644
No 57
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.6e-35 Score=316.57 Aligned_cols=216 Identities=40% Similarity=0.716 Sum_probs=187.6
Q ss_pred ccccchHHHHHHhcCCCCC------ccccccCceEEEEEEeCCCcEEEEEEccCC----ChhhHHHHHHHHHHHHhcCCC
Q 003140 611 VRSFTYGEMALATNNFNSS------TQIGQGGYGKVYKGILPDGTVVAVKRAQEG----SLQGEKEFLTEIQFLSRLHHR 680 (845)
Q Consensus 611 ~~~~~~~~~~~~~~~f~~~------~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~----~~~~~~~~~~Ei~~l~~l~H~ 680 (845)
...|++.++..++++|... +.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999887 8999999999999987 6889999998643 223457899999999999999
Q ss_pred ceeeEEEEEeeCCeEEEEEEcCCCCCHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003140 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD 759 (845)
Q Consensus 681 nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~ 759 (845)
||+++++++.+.+..++||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEc
Confidence 9999999999999999999999999999999753 3456999999999999999999999998 99999999999999
Q ss_pred CCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 760 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 760 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.++.+||+|||+++...... .........||+.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFA-----QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp TTCCEEECCCTTCEECCSCS-----SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred CCCcEEEeeccccccccccc-----ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 99999999999998654321 1122234568999999998865 58899999999999999999999997543
No 58
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.4e-35 Score=319.67 Aligned_cols=202 Identities=30% Similarity=0.454 Sum_probs=173.6
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 367889999999999999999998899999999875322 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 100 FME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp CCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred CCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 997 5888888654 345899999999999999999999998 9999999999999999999999999998754221
Q ss_pred CCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 174 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 224 (311)
T 3niz_A 174 ------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224 (311)
T ss_dssp ------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence 12334568999999999876 568999999999999999999999997543
No 59
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=328.36 Aligned_cols=202 Identities=24% Similarity=0.401 Sum_probs=179.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 367899999999999999999975 6899999999876666667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~--~~~~kl~DFGla~~~~~~~ 779 (845)
+++|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 9999999999653 346899999999999999999999998 999999999999974 478999999999876422
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 205 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 254 (387)
T 1kob_A 205 -------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254 (387)
T ss_dssp -------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred -------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC
Confidence 12234469999999999999999999999999999999999999997644
No 60
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.2e-35 Score=326.91 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=177.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999975 68999999986532 233567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999997653 5899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 242 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ---------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence 234568999999999999999999999999999999999999997543
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=320.86 Aligned_cols=200 Identities=25% Similarity=0.408 Sum_probs=176.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|...+.||+|+||.||+|... +|+.||||+++..... ..+++.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888999999999999999975 6899999998754321 357899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEecCC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~----~~kl~DFGl 771 (845)
++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 46899999999999999999999998 99999999999999887 899999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 165 AHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 98764221 123456999999999999999999999999999999999999999654
No 62
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.1e-35 Score=327.33 Aligned_cols=203 Identities=22% Similarity=0.346 Sum_probs=177.7
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 696 (845)
..++|...+.||+|+||+||+|... +|+.||||+++... ....+.+..|.++++.+ +||+|+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4468899999999999999999976 48899999987532 23356788999999988 8999999999999999999
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997643 5899999999999999999999998 9999999999999999999999999998543
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 173 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 225 (353)
T 2i0e_A 173 WD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225 (353)
T ss_dssp CT-------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cC-------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence 21 122345679999999999999999999999999999999999999997543
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-35 Score=326.40 Aligned_cols=203 Identities=23% Similarity=0.338 Sum_probs=176.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357888999999999999999975 68999999985321 123578999999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCC
Q 003140 697 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 771 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~---~kl~DFGl 771 (845)
+||||+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888653 3456899999999999999999999998 999999999999987654 99999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 180 AIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred eeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 98764321 1223457999999999999999999999999999999999999999764
No 64
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=8.1e-36 Score=325.07 Aligned_cols=204 Identities=27% Similarity=0.415 Sum_probs=174.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 67889999999999999999976 789999999865432 3346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999998543 45899999999999999999999998 9999999999999999999999999998653221
Q ss_pred CccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....+
T Consensus 160 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 213 (323)
T 3tki_A 160 ---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (323)
T ss_dssp ---EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred ---cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence 1122334679999999999987765 7799999999999999999999976443
No 65
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.7e-36 Score=316.79 Aligned_cols=204 Identities=32% Similarity=0.526 Sum_probs=179.0
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
..++|...+.||+|+||.||+|...+++.||||++.... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 346788899999999999999999889999999997643 3356899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 160 (269)
T ss_dssp CTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc--
Confidence 9999999999654 346899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
........+|..|+|||.+.+..++.++||||+|+++|||++ |+.||....
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 161 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ----cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 112233456778999999999999999999999999999999 999997543
No 66
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.4e-36 Score=325.83 Aligned_cols=203 Identities=28% Similarity=0.370 Sum_probs=172.1
Q ss_pred HHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----eEE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQM 696 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~ 696 (845)
...++|++.+.||+|+||.||+|... ++.||||++.... .....+.+|+.++++++||||+++++++.+.. ..+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 34578889999999999999999875 7999999986533 33445677999999999999999999997754 479
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CCCCeEecCCCCCCEEEcCCCcEEE
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------ADPPVFHRDIKASNILLDHKFTAKV 766 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~iiHrDLk~~NILl~~~~~~kl 766 (845)
+||||+++|+|.++++.. .+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||
T Consensus 99 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEE
Confidence 999999999999999763 489999999999999999999998 6 999999999999999999999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||+||+.||....
T Consensus 173 ~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 173 ADFGLALKFEAGKS-----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp CCCTTCEEECTTSC-----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred ccCCcccccccccC-----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 99999986543221 1122335789999999999863 45668999999999999999999997543
No 67
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-35 Score=327.43 Aligned_cols=212 Identities=22% Similarity=0.300 Sum_probs=187.7
Q ss_pred CccccchHHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-----CCcee
Q 003140 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLV 683 (845)
Q Consensus 610 ~~~~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-----H~nIv 683 (845)
....+++.+.....++|.+.+.||+|+||.||+|... +++.||||+++. .....+.+..|++++++++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 3456777777788899999999999999999999974 789999999875 3344567888999999996 99999
Q ss_pred eEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---
Q 003140 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--- 760 (845)
Q Consensus 684 ~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~--- 760 (845)
++++++...+..++||||+ +++|.+++.......+++..+..++.||++||+|||+.+ |+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence 9999999999999999999 999999998876667999999999999999999999998 999999999999975
Q ss_pred ----------------------CCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHH
Q 003140 761 ----------------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSL 818 (845)
Q Consensus 761 ----------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~ 818 (845)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 789999999999864321 234568999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCC
Q 003140 819 GVVFLELLTGMQPISHGK 836 (845)
Q Consensus 819 Gvvl~elltG~~Pf~~~~ 836 (845)
||++|||++|+.||...+
T Consensus 246 G~il~ell~g~~pf~~~~ 263 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHE 263 (360)
T ss_dssp HHHHHHHHHSSCSCCCSS
T ss_pred HHHHHHHHHCCCCCCCCc
Confidence 999999999999997644
No 68
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1e-35 Score=315.13 Aligned_cols=204 Identities=30% Similarity=0.465 Sum_probs=179.2
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
..++|...+.||+|+||.||+|...++..||||+++... ...+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 456788899999999999999999888899999997643 3356799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 158 (268)
T 3sxs_A 85 ISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-- 158 (268)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--
T ss_pred cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh--
Confidence 9999999999764 235899999999999999999999998 9999999999999999999999999998764322
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 159 ----YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp ----EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred ----hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 112233456778999999998899999999999999999999 999997543
No 69
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-35 Score=329.47 Aligned_cols=206 Identities=29% Similarity=0.462 Sum_probs=166.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
.++|.+.+.||+|+||.||+|... ++..||||+++... ....++|.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999864 57789999997643 3445689999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.++++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999754 346899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
... .........++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 200 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~ 255 (373)
T 2qol_A 200 DPE----AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC
T ss_pred CCc----cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 211 0111122345778999999999999999999999999999998 999996543
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=5.9e-36 Score=331.09 Aligned_cols=215 Identities=27% Similarity=0.469 Sum_probs=183.2
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSL 685 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l 685 (845)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 55667778889999999999999999999973 246899999997643 33456799999999999 79999999
Q ss_pred EEEEeeCCe-EEEEEEcCCCCCHHHHHhccCC------------------------------------------------
Q 003140 686 VGYCDEEGE-QMLVYEFMSNGTLRDQLSAKSK------------------------------------------------ 716 (845)
Q Consensus 686 ~g~~~~~~~-~~LV~E~~~~gsL~~~l~~~~~------------------------------------------------ 716 (845)
++++.+.+. .++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999976432
Q ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 717 ----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 717 ----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~- 247 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP- 247 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT-
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc-
Confidence 12899999999999999999999998 9999999999999999999999999998654322
Q ss_pred CCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.........||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 248 ----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 248 ----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp ----TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ----cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 1222344568899999999999999999999999999999998 999997643
No 71
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=320.31 Aligned_cols=200 Identities=28% Similarity=0.408 Sum_probs=174.4
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--eEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 57888999999999999999976 58999999987533 334577889999999999999999999997765 789999
Q ss_pred EcCCCCCHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEEecCCccc
Q 003140 700 EFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRL 774 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl----~~~~~~kl~DFGla~~ 774 (845)
||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997643 334899999999999999999999998 9999999999999 7888999999999987
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhc--------CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--------THKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
..... ......||..|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 166 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 225 (319)
T 4euu_A 166 LEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (319)
T ss_dssp CCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred cCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 64321 123456899999999986 57889999999999999999999999964
No 72
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-35 Score=330.46 Aligned_cols=332 Identities=18% Similarity=0.160 Sum_probs=257.5
Q ss_pred CCCCCCCCCCCCCCcceEecCCC-------CC-------CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCC
Q 003140 54 LSNWNRGDPCTSNWTGVLCFNTT-------MD-------DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKIS 119 (845)
Q Consensus 54 l~~W~~~~~c~~~w~Gv~C~~~~-------~~-------~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~ 119 (845)
+++|.....|++.|.+..|.... .. -...+++.|++.++.++...+..+..+++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 57899888898766665552110 00 12357888999999988655556789999999999999999
Q ss_pred CCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccC
Q 003140 120 GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS 199 (845)
Q Consensus 120 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 199 (845)
+..+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++...+..|.++++|++|++++|++++..+..+.
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 87778899999999999999999988888899999999999999999965556679999999999999999988888899
Q ss_pred CCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCcccc---------------ccCCCccEEEcccCCCC
Q 003140 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY---------------SNMSKLLKLSLRNCSLQ 264 (845)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~---------------~~l~~L~~L~Ls~N~l~ 264 (845)
.+++|++|++++|++++.. +..+++|+.|++++|.+++...+..+ ...++|+.|++++|+++
T Consensus 163 ~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT 239 (390)
T ss_dssp SCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCC
T ss_pred CCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCc
Confidence 9999999999999998653 34445555555555555432222111 12357888999999888
Q ss_pred CCCCCCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhh
Q 003140 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (845)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~ 343 (845)
+. +.+..+++|+.|++++|.+++..|..+. ..+|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..
T Consensus 240 ~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 316 (390)
T 3o6n_A 240 DT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 316 (390)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred cc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc
Confidence 75 5688889999999999999987776654 4589999999999985 5677788999999999999998 67877776
Q ss_pred hccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCCccccCCC
Q 003140 344 SRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 344 l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
+.. |+.|++++|+|+.++ ...++.++.|++++|||.|+|....+..+.
T Consensus 317 l~~-----L~~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 364 (390)
T 3o6n_A 317 FDR-----LENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVA 364 (390)
T ss_dssp HTT-----CSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred cCc-----CCEEECCCCccceeC-chhhccCCEEEcCCCCccchhHHHHHHHHH
Confidence 654 559999999999986 235889999999999999999766655444
No 73
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.9e-36 Score=343.26 Aligned_cols=209 Identities=26% Similarity=0.433 Sum_probs=182.1
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.+++++..++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 345566778899999999999999999999888999999998644 34678999999999999999999999987 5678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999998654456889999999999999999999998 999999999999999999999999999875
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
.... ........++..|+|||++....++.++|||||||++|||+| |+.||...
T Consensus 335 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 335 EDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp CCHH------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCc------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 4211 111223446788999999999999999999999999999999 99999754
No 74
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.5e-35 Score=318.37 Aligned_cols=203 Identities=26% Similarity=0.464 Sum_probs=162.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|...+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999965 689999999875432 234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 701 FMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 701 ~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
|++ |+|.+++... ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 6999998653 2245899999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 160 IPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp SCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 221 11234568999999999976 468999999999999999999999997544
No 75
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=327.32 Aligned_cols=196 Identities=27% Similarity=0.407 Sum_probs=169.8
Q ss_pred CccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcCCCCCH
Q 003140 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~~~gsL 707 (845)
.+.||+|+||.||+|... +|+.||+|+++.......+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999964 6899999999877666778899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE--cCCCcEEEEecCCcccCCCCCCCCccc
Q 003140 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL--DHKFTAKVADFGLSRLAPVPDIEGIVP 785 (845)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl--~~~~~~kl~DFGla~~~~~~~~~~~~~ 785 (845)
.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~------ 243 (373)
T 2x4f_A 174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE------ 243 (373)
T ss_dssp HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC------
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc------
Confidence 9988653 345899999999999999999999998 9999999999999 567899999999998764321
Q ss_pred cceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 244 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 292 (373)
T 2x4f_A 244 --KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292 (373)
T ss_dssp --BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1233469999999999999999999999999999999999999997654
No 76
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-35 Score=350.32 Aligned_cols=312 Identities=19% Similarity=0.245 Sum_probs=280.8
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
.++.|++++|.+++..+..|+.+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..|..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 7999999999999888888999999999999999999 789899999999999999999998888899999999999999
Q ss_pred cccccCCCCc-cccCccCCCEEEccCCCCCCCC--ccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCC
Q 003140 163 QNYISGSLPK-SFANLNKTRHFHMNNNSISGQI--PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (845)
Q Consensus 163 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (845)
+|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|++|++++|++++..|..|..+++|++|+|++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9999977765 4999999999999999998765 778999999999999999999999999999999999999999998
Q ss_pred CCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcC-CCC--CC-CccccCEEEccCCcCCCCcc
Q 003140 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGS-IPP--GR-LSLNITTIKLSNNKLTGTIP 314 (845)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~-ip~--~~-~~~~L~~L~Ls~N~l~~~~p 314 (845)
+...+..+.++++|+.|++++|.+++.++. +..+++|+.|++++|.+++. ++. .+ ...+|+.|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 744445699999999999999999997764 88999999999999999863 222 22 23489999999999999999
Q ss_pred cccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCCcc
Q 003140 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQ 392 (845)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~Np~~c~~~~~~ 392 (845)
..|..+++|++|+|++|++++..|..+..+. .| .|++++|+++.++... .++.++.+++++|||.|+|+..+
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-----~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 567 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLK-----GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCC-----SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHH
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccc-----cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHH
Confidence 9999999999999999999999998887654 45 7999999999988764 58899999999999999999999
Q ss_pred ccCCCCCCC
Q 003140 393 FCGSHSDDD 401 (845)
Q Consensus 393 ~~~~~~~~~ 401 (845)
|..|.....
T Consensus 568 ~~~w~~~~~ 576 (606)
T 3t6q_A 568 FLEWYKENM 576 (606)
T ss_dssp HHHHHHHCG
T ss_pred HHHHHHhCc
Confidence 988875443
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.1e-35 Score=336.66 Aligned_cols=201 Identities=32% Similarity=0.502 Sum_probs=176.5
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-eEEE
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQML 697 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~-~~~L 697 (845)
+.+..++|...+.||+|+||.||+|.+. |+.||||+++... ..++|.+|+++|++++||||+++++++.+.+ ..++
T Consensus 188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 188 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred cccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3445677888999999999999999985 7899999998643 4568999999999999999999999987665 7999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999998876666899999999999999999999998 99999999999999999999999999985431
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
. .....++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 342 ~----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 342 T----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp ---------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred c----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 122356889999999999999999999999999999998 99999753
No 78
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.5e-35 Score=338.97 Aligned_cols=204 Identities=24% Similarity=0.417 Sum_probs=179.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|...+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999975 699999999865322 2346789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 699 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 456999999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 341 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AGQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TTC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CCC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 321 11234579999999999999999999999999999999999999997653
No 79
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.7e-36 Score=344.16 Aligned_cols=210 Identities=31% Similarity=0.497 Sum_probs=183.7
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeCC-CcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
++++...++|...+.||+|+||.||+|.+.. +..||||+++... ...++|.+|+++|++++||||++++++|.+.+..
T Consensus 213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 291 (495)
T 1opk_A 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 291 (495)
T ss_dssp SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence 3445556778889999999999999999864 8899999997643 3467899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceec
Confidence 99999999999999998766677999999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.... ........++..|+|||++....++.++|||||||++|||+| |+.||...+
T Consensus 369 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~ 424 (495)
T 1opk_A 369 TGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424 (495)
T ss_dssp TTCC------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cCCc------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence 4321 111223446788999999999999999999999999999999 999997543
No 80
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.2e-35 Score=321.92 Aligned_cols=205 Identities=27% Similarity=0.407 Sum_probs=169.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----e
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----E 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~----~ 694 (845)
.++|.+.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36788999999999999999996 5789999999876432 33467899999999999999999999986654 3
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.++||||+++|+|.++++... .+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999997643 5899999999999999999999998 99999999999999999999999999986
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 166 ~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 166 IADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp --------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccc----ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 543211 1112234568999999999999999999999999999999999999997544
No 81
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.6e-35 Score=347.35 Aligned_cols=341 Identities=18% Similarity=0.238 Sum_probs=262.4
Q ss_pred ceEecCCC---CCC-CcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCC
Q 003140 69 GVLCFNTT---MDD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (845)
Q Consensus 69 Gv~C~~~~---~~~-~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (845)
-|.|.... ++. -...++.|+|++|+|++..+.+|.++++|++|+|++|+|++..|.+|.++++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 46786533 222 23579999999999998888899999999999999999998888889999999999999999997
Q ss_pred CCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCC-CCccccCCCCCcceeeccccccccCCCcccC
Q 003140 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELS 223 (845)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 223 (845)
..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++|.+++ ..|..++.+++|++|+|++|++++..+..|.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 777789999999999999999998878889999999999999999975 4678889999999999999987654322111
Q ss_pred --------------------------------------------------------------------------------
Q 003140 224 -------------------------------------------------------------------------------- 223 (845)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (845)
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred chhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003140 224 -------------------------------------------------------------------------------- 223 (845)
Q Consensus 224 -------------------------------------------------------------------------------- 223 (845)
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l 354 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL 354 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEE
T ss_pred cccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhc
Confidence
Q ss_pred --------------CCCCCcEEEccCCcCCCC------------------------------------------------
Q 003140 224 --------------ELPKLLILQLDNNNFEGT------------------------------------------------ 241 (845)
Q Consensus 224 --------------~l~~L~~L~Ls~N~l~~~------------------------------------------------ 241 (845)
.+++|+.|+++.|.+...
T Consensus 355 ~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 355 TFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp EEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEES
T ss_pred ccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccc
Confidence 122334444444433210
Q ss_pred -CCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCc-CCCCCCCc-cccCEEEccCCcCCCCccccc
Q 003140 242 -TIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG-SIPPGRLS-LNITTIKLSNNKLTGTIPSNF 317 (845)
Q Consensus 242 -~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~-~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 317 (845)
..+..+.++++|+.++++.|.+.+..+. +..+++|+.|++++|.+.. .+|..+.. .+|+.|+|++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 0011233445555566666666665553 6677888888888887543 34544433 489999999999999999999
Q ss_pred CCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CC-CCCcEEEecCCcccccCCCcccc
Q 003140 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NI-PPNVTVRLRGNPFCLNTNAEQFC 394 (845)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~-~~l~~l~l~~Np~~c~~~~~~~~ 394 (845)
.++++|++|+|++|+|++..|..+..+.+ |++|||++|+|++++... .+ +.++.|+|++|||.|||++.+|.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~-----L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~ 589 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNS-----LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFL 589 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTT-----CCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCC-----CCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHH
Confidence 99999999999999999888888876554 569999999999987753 45 57999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCCcCC
Q 003140 395 GSHSDDDNEIDRSTNSTLDCRA 416 (845)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (845)
.|.......+.. ...+.|..
T Consensus 590 ~wl~~~~~~~~~--~~~~~C~~ 609 (635)
T 4g8a_A 590 QWIKDQRQLLVE--VERMECAT 609 (635)
T ss_dssp HHHHHTTTTBSC--GGGCBBCS
T ss_pred HHHHhCCCccCC--CCCceeCC
Confidence 887544333222 23456655
No 82
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.9e-35 Score=327.74 Aligned_cols=200 Identities=27% Similarity=0.389 Sum_probs=167.4
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHH-HHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
++|...+.||+|+||.||+|+.. +++.||||+++.... ...+.+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999975 588999999875432 234556777776 5778999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 9999999999999764 35889999999999999999999999 999999999999999999999999999853221
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 193 -------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 193 -------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp -------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 12234567999999999999999999999999999999999999999754
No 83
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.3e-35 Score=317.00 Aligned_cols=208 Identities=28% Similarity=0.462 Sum_probs=178.5
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
.+....++|...+.||+|+||.||+|.+.++..||||+++.... ..+++.+|++++++++||||+++++++.+.+..++
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 44455678899999999999999999998889999999986433 35689999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999999763 235899999999999999999999998 99999999999999999999999999986542
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.. ........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 173 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 173 DE------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp HH------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cc------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 21 111233456788999999998999999999999999999998 999997543
No 84
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=331.32 Aligned_cols=203 Identities=25% Similarity=0.385 Sum_probs=176.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
..++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567899999999999999999864 78999999987543 23456789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCcccC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 775 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~---~~~~~kl~DFGla~~~ 775 (845)
|||+++|+|.+++... ..+++..+..++.||++||+|||+++ |+||||||+|||++ .++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999764 45899999999999999999999998 99999999999998 4678999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 164 ~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~ 217 (444)
T 3soa_A 164 EGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217 (444)
T ss_dssp CTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc
Confidence 4321 12234679999999999999999999999999999999999999996543
No 85
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-35 Score=314.47 Aligned_cols=201 Identities=28% Similarity=0.434 Sum_probs=171.6
Q ss_pred cCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChh--hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
++|...+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999988999999998654322 246788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
++ ++|.+++... ...+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 153 (288)
T 1ob3_A 82 LD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP--- 153 (288)
T ss_dssp CS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc---
Confidence 97 5999988654 346899999999999999999999998 999999999999999999999999999765321
Q ss_pred CccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 154 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (288)
T 1ob3_A 154 ----VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ----ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 112234468999999999876 458999999999999999999999997543
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.7e-35 Score=313.04 Aligned_cols=202 Identities=27% Similarity=0.443 Sum_probs=173.6
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
++|+..+.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47888999999999999999975 68999999987533 2334678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++ ++.+++... ...+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 9974 666666443 346899999999999999999999998 9999999999999999999999999998754221
Q ss_pred CCccccceeecccCCCCccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.......||..|+|||++.+.. ++.++|||||||++|||++|..||..+.+
T Consensus 156 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~ 207 (292)
T 3o0g_A 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND 207 (292)
T ss_dssp ------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS
T ss_pred ------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 2233456899999999998765 89999999999999999999999865554
No 87
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=322.74 Aligned_cols=200 Identities=28% Similarity=0.431 Sum_probs=162.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467889999999999999999976 58899999987543 345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcccCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~~kl~DFGla~~~~~~ 778 (845)
+++|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 130 VTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 9999999999653 45899999999999999999999998 999999999999975 889999999999865321
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 205 --------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 255 (349)
T 2w4o_A 205 --------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred --------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence 122345689999999999999999999999999999999999999975443
No 88
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-35 Score=325.05 Aligned_cols=210 Identities=30% Similarity=0.506 Sum_probs=179.6
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeC------CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
+....++|...+.||+|+||.||+|... +++.||||+++... ....++|.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999974 34899999997643 3345789999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhccC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 749 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr 749 (845)
.+..++||||+++|+|.++++... ...+++..++.++.||++||+|||+++ |+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 999999999999999999997642 256899999999999999999999998 9999
Q ss_pred CCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-C
Q 003140 750 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-G 828 (845)
Q Consensus 750 DLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G 828 (845)
||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||+| |
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 9999999999999999999999976532210 112234567899999999999999999999999999999999 9
Q ss_pred CCCCCCCC
Q 003140 829 MQPISHGK 836 (845)
Q Consensus 829 ~~Pf~~~~ 836 (845)
+.||....
T Consensus 274 ~~p~~~~~ 281 (343)
T 1luf_A 274 LQPYYGMA 281 (343)
T ss_dssp CCTTTTSC
T ss_pred CCcCCCCC
Confidence 99997543
No 89
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.8e-35 Score=337.14 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=168.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 357888999999999999999964 6899999998753 223345788999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+ .+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 227 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999999764 358999999999999999999998 77 99999999999999999999999999985432
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 302 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 302 D-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C-------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 1 122345679999999999999999999999999999999999999997643
No 90
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=317.88 Aligned_cols=198 Identities=27% Similarity=0.374 Sum_probs=168.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|+..+.||+|+||+||+|... +|+.||||++.... .....++..|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 467999999999999999999976 79999999976532 33344566677666665 899999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+ +|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 789999887653 46999999999999999999999998 999999999999999999999999999865422
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
.......||++|+|||++.+ .++.++|||||||++|||++|..|+..
T Consensus 211 --------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 211 --------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp ------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred --------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 12334568999999998875 789999999999999999999877754
No 91
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-34 Score=339.54 Aligned_cols=304 Identities=21% Similarity=0.234 Sum_probs=243.0
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57888999999888877788888999999999999888887888888888999999988888 66666 7888888888
Q ss_pred ccccccCC-CCccccCccCCCEEEccCCCCCCC-------------------------CccccCCCC-------------
Q 003140 162 DQNYISGS-LPKSFANLNKTRHFHMNNNSISGQ-------------------------IPPELSRLP------------- 202 (845)
Q Consensus 162 s~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~-------------------------~p~~l~~l~------------- 202 (845)
++|++++. +|..|.++++|++|+|++|++++. .|..+..+.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~ 208 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSL 208 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccc
Confidence 88888863 467888888888888888877532 222222211
Q ss_pred --------------------------------------------------------------------Ccceeecccccc
Q 003140 203 --------------------------------------------------------------------SLVHMLLDNNNL 214 (845)
Q Consensus 203 --------------------------------------------------------------------~L~~L~L~~N~l 214 (845)
+|++|++++|++
T Consensus 209 ~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l 288 (562)
T 3a79_B 209 FSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTI 288 (562)
T ss_dssp CCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEE
T ss_pred hhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEe
Confidence 566666677777
Q ss_pred ccCCCccc-----------------------------------------------------CCCCCCcEEEccCCcCCCC
Q 003140 215 TGYLPPEL-----------------------------------------------------SELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 215 ~~~~p~~l-----------------------------------------------------~~l~~L~~L~Ls~N~l~~~ 241 (845)
+|.+|..+ ..+++|++|+|++|++++
T Consensus 289 ~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~- 367 (562)
T 3a79_B 289 TERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTD- 367 (562)
T ss_dssp CSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCT-
T ss_pred eccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcccc-
Confidence 76676654 567788888999988886
Q ss_pred CCccccccCCCccEEEcccCCCCCCCC---CCCCCCCccEEEcccccCCcCCCCCCC--ccccCEEEccCCcCCCCcccc
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMP---DLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSN 316 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~---~l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls~N~l~~~~p~~ 316 (845)
..|..+.++++|+.|+|++|++++.++ .+..+++|+.|++++|++++.+|...+ ..+|+.|+|++|++++.+|..
T Consensus 368 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 447 (562)
T 3a79_B 368 SVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRC 447 (562)
T ss_dssp TTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSS
T ss_pred chhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhh
Confidence 578888888999999999999887542 478888999999999999876776533 348999999999998877765
Q ss_pred cCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCCcccc
Q 003140 317 FSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFC 394 (845)
Q Consensus 317 ~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~~c~~~~~~~~ 394 (845)
+. ++|++|+|++|+++ .+|..++.+ ++|+.|+|++|+|+++|.. + .++.++.+++++|||.|+|+..+|.
T Consensus 448 l~--~~L~~L~L~~N~l~-~ip~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~ 519 (562)
T 3a79_B 448 LP--PKVKVLDLHNNRIM-SIPKDVTHL-----QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYL 519 (562)
T ss_dssp CC--TTCSEEECCSSCCC-CCCTTTTSS-----CCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHH
T ss_pred hc--CcCCEEECCCCcCc-ccChhhcCC-----CCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHH
Confidence 54 68999999999998 788877644 4566999999999999987 5 5899999999999999999998885
Q ss_pred C-CC
Q 003140 395 G-SH 397 (845)
Q Consensus 395 ~-~~ 397 (845)
. |.
T Consensus 520 ~~~~ 523 (562)
T 3a79_B 520 SEWI 523 (562)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4 53
No 92
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.2e-35 Score=321.40 Aligned_cols=198 Identities=26% Similarity=0.395 Sum_probs=173.5
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999996 5789999999864321 22357899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+ +|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp CCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred ECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 999 78999988664 35899999999999999999999998 999999999999999999999999999865422
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred -------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 12234569999999999988776 78999999999999999999999653
No 93
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.1e-35 Score=331.26 Aligned_cols=210 Identities=28% Similarity=0.463 Sum_probs=178.8
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.+....++|...+.||+|+||.||+|.+. +++.||||+++... ....++|.+|++++++++||||+++++++.+.+..
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 34455678888999999999999999986 78999999987643 23345789999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 99999999999999997542 35889999999999999999999998 999999999999999999999999999864
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.... .........++..|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 264 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 264 ADGV-----YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp TTSE-----EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred CCCc-----eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 3211 0011112235678999999998899999999999999999998 999997543
No 94
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.4e-35 Score=318.72 Aligned_cols=208 Identities=25% Similarity=0.402 Sum_probs=171.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-------
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------- 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~------- 693 (845)
.++|++.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 357888999999999999999976 79999999987543 334578999999999999999999999986543
Q ss_pred --------------------------------------------------eEEEEEEcCCCCCHHHHHhccCC-CCCCHH
Q 003140 694 --------------------------------------------------EQMLVYEFMSNGTLRDQLSAKSK-EPLGFA 722 (845)
Q Consensus 694 --------------------------------------------------~~~LV~E~~~~gsL~~~l~~~~~-~~l~~~ 722 (845)
..++||||+++|+|.+++..... ....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999977433 345777
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCcc-----ccceeecccCCCC
Q 003140 723 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV-----PAHVSTVVKGTPG 797 (845)
Q Consensus 723 ~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-----~~~~~~~~~gt~~ 797 (845)
.++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++........... .........||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 88999999999999999998 999999999999999999999999999876543211000 0112234579999
Q ss_pred ccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 798 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 798 y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 999999999999999999999999999999988764
No 95
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.4e-35 Score=316.97 Aligned_cols=204 Identities=30% Similarity=0.468 Sum_probs=173.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-----CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~ 695 (845)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+++.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788899999999999999984 36899999999877766778899999999999999999999998553 568
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999997643 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
..... .........++..|+|||.+.+..++.++||||||+++|||+||..||..
T Consensus 165 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 165 PQDKE----FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred cCCcc----eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 43211 11122334577889999999999999999999999999999999999864
No 96
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-35 Score=315.08 Aligned_cols=204 Identities=30% Similarity=0.435 Sum_probs=172.4
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCC-----hhhHHHHHHHHHHHHhc---CCCceeeEEEEEee
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE 691 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~-----~~~~~~~~~Ei~~l~~l---~H~nIv~l~g~~~~ 691 (845)
...++|.+.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4467899999999999999999996 478999999986322 11234667777777766 49999999999977
Q ss_pred CC-----eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003140 692 EG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (845)
Q Consensus 692 ~~-----~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl 766 (845)
.. ..++||||++ |+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence 55 5799999997 69999998876667999999999999999999999999 999999999999999999999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 162 ~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 223 (308)
T 3g33_A 162 ADFGLARIYSYQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 223 (308)
T ss_dssp CSCSCTTTSTTC--------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS
T ss_pred eeCccccccCCC--------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999865422 12344578999999999999999999999999999999999999996544
No 97
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.4e-35 Score=319.68 Aligned_cols=210 Identities=30% Similarity=0.459 Sum_probs=180.2
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
+....++|.+.+.||+|+||.||+|.. .+++.||||+++... ....+++.+|++++++++||||+++++++.+
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 344567888999999999999999985 245889999997543 3445789999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhccCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEec
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAKSK----------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 749 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHr 749 (845)
.+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Cccc
Confidence 9999999999999999999976432 34899999999999999999999998 9999
Q ss_pred CCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-C
Q 003140 750 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-G 828 (845)
Q Consensus 750 DLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G 828 (845)
||||+|||++.++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSC-----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred ccchheEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999986643221 111233457788999999999899999999999999999999 9
Q ss_pred CCCCCCCC
Q 003140 829 MQPISHGK 836 (845)
Q Consensus 829 ~~Pf~~~~ 836 (845)
+.||....
T Consensus 250 ~~p~~~~~ 257 (314)
T 2ivs_A 250 GNPYPGIP 257 (314)
T ss_dssp CCSSTTCC
T ss_pred CCCCCCCC
Confidence 99997543
No 98
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=7.7e-35 Score=326.66 Aligned_cols=197 Identities=24% Similarity=0.362 Sum_probs=163.1
Q ss_pred cCCCCC-ccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHh-cCCCceeeEEEEEee----CCeEE
Q 003140 624 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQM 696 (845)
Q Consensus 624 ~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~-l~H~nIv~l~g~~~~----~~~~~ 696 (845)
++|... +.||+|+||+||+|... +|+.||||+++.. ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 345554 68999999999999975 6899999998642 356788888755 489999999999865 56789
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcc
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 773 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~~kl~DFGla~ 773 (845)
+||||+++|+|.+++.......+++..+..++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998766667999999999999999999999998 999999999999997 7899999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 267 (400)
T 1nxk_A 213 ETTSH--------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 267 (400)
T ss_dssp ECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred ccCCC--------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 65321 12334578999999999999999999999999999999999999997543
No 99
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=314.64 Aligned_cols=200 Identities=30% Similarity=0.449 Sum_probs=168.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh--------------------------hHHHHHHHHHHHH
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------------------GEKEFLTEIQFLS 675 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--------------------------~~~~~~~Ei~~l~ 675 (845)
.++|.+.+.||+|+||.||+|... +++.||||++...... ..+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367888999999999999999964 6899999998654311 1246899999999
Q ss_pred hcCCCceeeEEEEEee--CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCC
Q 003140 676 RLHHRNLVSLVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (845)
Q Consensus 676 ~l~H~nIv~l~g~~~~--~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~ 753 (845)
+++||||+++++++.+ .+..++||||+++|+|.+++. ...+++..++.++.|+++||+|||+++ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999986 568899999999999987653 346899999999999999999999998 99999999
Q ss_pred CCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCC---CCchhhHHHHHHHHHHHHhCCC
Q 003140 754 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQ 830 (845)
Q Consensus 754 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~elltG~~ 830 (845)
+|||++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred HHEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999998654221 1233457999999999997655 4789999999999999999999
Q ss_pred CCCCC
Q 003140 831 PISHG 835 (845)
Q Consensus 831 Pf~~~ 835 (845)
||...
T Consensus 239 pf~~~ 243 (298)
T 2zv2_A 239 PFMDE 243 (298)
T ss_dssp SSCCS
T ss_pred CCCCc
Confidence 99754
No 100
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-35 Score=338.54 Aligned_cols=209 Identities=31% Similarity=0.473 Sum_probs=177.1
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.+.+.+..++|...+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++||||+++++++.+ +..
T Consensus 176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~ 253 (452)
T 1fmk_A 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 253 (452)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence 344556677888999999999999999999888889999998644 345689999999999999999999999876 678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++......+++..++.++.|+++||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~ 330 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 330 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC--
T ss_pred EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceec
Confidence 99999999999999997655556899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
.... ........++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 331 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 331 EDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp ------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCCc------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 4221 111223456789999999999999999999999999999999 99999754
No 101
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-35 Score=324.60 Aligned_cols=207 Identities=29% Similarity=0.486 Sum_probs=178.9
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC--------CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEe
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~ 690 (845)
...++|.+.+.||+|+||.||+|... ++..||||+++... ....+++.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34567888999999999999999852 34689999987643 34457899999999999 9999999999999
Q ss_pred eCCeEEEEEEcCCCCCHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 003140 691 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (845)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NI 756 (845)
+.+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceE
Confidence 9999999999999999999997653 245899999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 757 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
|++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCT-----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEcCCCcEEEcccCcccccccccc-----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999987643221 112233457889999999999999999999999999999999 99999754
No 102
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.4e-35 Score=325.80 Aligned_cols=208 Identities=20% Similarity=0.242 Sum_probs=170.9
Q ss_pred HhcCCCCCccccccCceEEEEEEeCC------CcEEEEEEccCCChhhH-----------HHHHHHHHHHHhcCCCceee
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHRNLVS 684 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~~~~~-----------~~~~~Ei~~l~~l~H~nIv~ 684 (845)
..++|.+.+.||+|+||.||+|.+.+ ++.||||++........ ..+.+|+..++.++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34678999999999999999999754 47899999876542211 23455667788889999999
Q ss_pred EEEEEeeC----CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-
Q 003140 685 LVGYCDEE----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD- 759 (845)
Q Consensus 685 l~g~~~~~----~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~- 759 (845)
+++++... ...++||||+ +|+|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99998764 4589999999 99999999764 356999999999999999999999998 99999999999999
Q ss_pred -CCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 760 -HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 760 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
.++.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 889999999999987643221111111222345699999999999999999999999999999999999999975
No 103
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=343.06 Aligned_cols=166 Identities=22% Similarity=0.310 Sum_probs=130.2
Q ss_pred CCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC---CCCCCCCCccEEEcccccCCcCCCCCCC--cc
Q 003140 223 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM---PDLSRIPNLGYLDLSSNQLNGSIPPGRL--SL 297 (845)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---~~l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~ 297 (845)
..+++|++|++++|++++ ..|..+.++++|+.|+|++|++++.+ ..+..+++|++|++++|.+++.+|...+ ..
T Consensus 321 ~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTD-TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCT-TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccCh-hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 556777788888888876 56777788888888888888887632 2367778888888888888865665422 34
Q ss_pred ccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCc
Q 003140 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNV 375 (845)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~ 375 (845)
+|+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+..+. .|+.|++++|+|+.+|.. + .++.++
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~-----~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE-----ALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT-----TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC-----CCCEEECCCCcCCccCHHHhccCCccc
Confidence 788888888888877776654 68888888888888 7888776544 456999999999999987 5 589999
Q ss_pred EEEecCCcccccCCCccc-cCCC
Q 003140 376 TVRLRGNPFCLNTNAEQF-CGSH 397 (845)
Q Consensus 376 ~l~l~~Np~~c~~~~~~~-~~~~ 397 (845)
.+++++|||.|+|+..+| ..|.
T Consensus 472 ~L~l~~N~~~c~c~~~~~~~~~~ 494 (520)
T 2z7x_B 472 KIWLHTNPWDCSCPRIDYLSRWL 494 (520)
T ss_dssp EEECCSSCBCCCHHHHHHHHHHH
T ss_pred EEECcCCCCcccCCchHHHHHHH
Confidence 999999999999999998 6665
No 104
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.2e-35 Score=315.91 Aligned_cols=210 Identities=32% Similarity=0.495 Sum_probs=185.1
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
+++....++|...+.||+|+||.||+|... ++..||||++.... ...+++.+|++++++++||||+++++++.+.+..
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 445566788999999999999999999976 48899999987643 3457899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999998877778999999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.... ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...+
T Consensus 162 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~ 217 (288)
T 3kfa_A 162 TGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217 (288)
T ss_dssp CSSS------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cCCc------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 4322 122333456789999999999999999999999999999999 999997543
No 105
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=328.34 Aligned_cols=206 Identities=29% Similarity=0.446 Sum_probs=175.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC------CCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|.+.+.||+|+||.||+|.+. +++.||||+++.. ......++.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999843 4678999998754 344566899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEE
Q 003140 696 MLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVA 767 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~---~~kl~ 767 (845)
++||||+++|+|.++++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 245899999999999999999999998 99999999999999554 59999
Q ss_pred ecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 768 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
|||+++...... .........||+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 227 DFG~a~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~ 291 (367)
T 3l9p_A 227 DFGMARDIYRAG-----YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291 (367)
T ss_dssp CCHHHHHHHHHS-----SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CCcccccccccc-----ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 999997542111 0112234567899999999999999999999999999999998 999997543
No 106
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.6e-35 Score=313.88 Aligned_cols=208 Identities=30% Similarity=0.474 Sum_probs=179.7
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++.+..++|...+.||+|+||.||+|...++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 4455667899999999999999999999888899999987643 345689999999999999999999999864 56889
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999997654446899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.. ........++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 162 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 215 (279)
T 1qpc_A 162 NE------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215 (279)
T ss_dssp SC------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cc------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence 21 111223456789999999998899999999999999999999 999997543
No 107
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-35 Score=322.01 Aligned_cols=211 Identities=27% Similarity=0.471 Sum_probs=178.8
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEE
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYC 689 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~ 689 (845)
+++...++|...+.||+|+||.||+|.. .++..||||++.... ....+.+.+|+++++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 4556678899999999999999999996 246789999987543 23346799999999999 899999999999
Q ss_pred eeCCeEEEEEEcCCCCCHHHHHhccCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 003140 690 DEEGEQMLVYEFMSNGTLRDQLSAKSK---------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFH 748 (845)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiH 748 (845)
...+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence 999999999999999999999976432 24799999999999999999999998 999
Q ss_pred cCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-
Q 003140 749 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT- 827 (845)
Q Consensus 749 rDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt- 827 (845)
|||||+|||++.++.+||+|||+++...... .........||+.|+|||.+.+..++.++|||||||++|||+|
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDS-----NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCc-----cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence 9999999999999999999999998654221 1122334557889999999999999999999999999999998
Q ss_pred CCCCCCCCC
Q 003140 828 GMQPISHGK 836 (845)
Q Consensus 828 G~~Pf~~~~ 836 (845)
|+.||....
T Consensus 271 g~~p~~~~~ 279 (344)
T 1rjb_A 271 GVNPYPGIP 279 (344)
T ss_dssp SCCSSTTCC
T ss_pred CCCCcccCC
Confidence 999997644
No 108
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=9.8e-35 Score=315.34 Aligned_cols=207 Identities=23% Similarity=0.366 Sum_probs=170.0
Q ss_pred cCCCCC-ccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
+.|.+. +.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567664 78999999999999964 7899999999776555677899999999995 79999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCCcccCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAPV 777 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~---~kl~DFGla~~~~~ 777 (845)
|+++|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+|||+++....
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 92 KMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred cCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 99999999999764 35889999999999999999999998 999999999999998775 99999999976542
Q ss_pred CCCCCccccceeecccCCCCccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
................||..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 21111111112234569999999999875 56889999999999999999999999764
No 109
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.5e-34 Score=307.64 Aligned_cols=200 Identities=25% Similarity=0.368 Sum_probs=177.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467888999999999999999975 5789999998775556677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~~~ 778 (845)
+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999998764 35899999999999999999999998 9999999999999 78899999999999865422
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 163 --------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 211 (277)
T 3f3z_A 163 --------KMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211 (277)
T ss_dssp --------SCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --------cchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence 12234568999999999865 48999999999999999999999997644
No 110
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=6.5e-35 Score=316.11 Aligned_cols=210 Identities=28% Similarity=0.452 Sum_probs=181.0
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCCCh-hhHHHHHHHHHHHHhc-CCCceeeEEEEEe
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~ 690 (845)
+....++|...+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 344567889999999999999999985 3578999999876433 3457899999999999 9999999999999
Q ss_pred eCCeEEEEEEcCCCCCHHHHHhccCC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCC
Q 003140 691 EEGEQMLVYEFMSNGTLRDQLSAKSK----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 754 (845)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~ 754 (845)
+.+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccc
Confidence 99999999999999999999976542 25899999999999999999999998 999999999
Q ss_pred CEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCC
Q 003140 755 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 833 (845)
Q Consensus 755 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~ 833 (845)
||+++.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDS-----NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCT-----TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred eEEEcCCCCEEEccccccccccccc-----cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999998764322 1112233457789999999999999999999999999999999 999997
Q ss_pred CCC
Q 003140 834 HGK 836 (845)
Q Consensus 834 ~~~ 836 (845)
...
T Consensus 250 ~~~ 252 (313)
T 1t46_A 250 GMP 252 (313)
T ss_dssp TCC
T ss_pred ccc
Confidence 644
No 111
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.2e-35 Score=344.54 Aligned_cols=333 Identities=18% Similarity=0.167 Sum_probs=263.2
Q ss_pred CCCCCCCCCCCCCC---CcceEecCC----CC-------CCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCC
Q 003140 53 KLSNWNRGDPCTSN---WTGVLCFNT----TM-------DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI 118 (845)
Q Consensus 53 ~l~~W~~~~~c~~~---w~Gv~C~~~----~~-------~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l 118 (845)
.+++|..+..|+.. |.++.|... +. .-...+++.|++.++.+....+..+..+++|++|+|++|.+
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCC
Confidence 46789888888764 555544311 00 00124678888999988876666688899999999999999
Q ss_pred CCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCcccc
Q 003140 119 SGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL 198 (845)
Q Consensus 119 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (845)
++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|++|.+++..|..+
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 98888899999999999999999998888889999999999999999997666778999999999999999998888889
Q ss_pred CCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccc---------------cCCCccEEEcccCCC
Q 003140 199 SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS---------------NMSKLLKLSLRNCSL 263 (845)
Q Consensus 199 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~---------------~l~~L~~L~Ls~N~l 263 (845)
..+++|++|+|++|++++.. +..+++|+.|++++|.+++...|..+. ..++|+.|+|++|.+
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l 244 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNL 244 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCC
T ss_pred hcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCC
Confidence 99999999999999998653 344555666666555554322221111 125788888888888
Q ss_pred CCCCCCCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhh
Q 003140 264 QGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (845)
Q Consensus 264 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~ 342 (845)
++. +.+..+++|+.|+|++|.+++.+|..+. ..+|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 245 ~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~ 321 (597)
T 3oja_B 245 TDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 321 (597)
T ss_dssp CCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred CCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccc
Confidence 874 5688899999999999999988777654 4489999999999996 5777888999999999999999 7888887
Q ss_pred hhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCCccccCCC
Q 003140 343 QSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 343 ~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
.+.. |+.|+|++|+|+.++ ...++.+..|++++|||.|+|...++..+.
T Consensus 322 ~l~~-----L~~L~L~~N~l~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 370 (597)
T 3oja_B 322 QFDR-----LENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVA 370 (597)
T ss_dssp HHTT-----CSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred cCCC-----CCEEECCCCCCCCcC-hhhcCCCCEEEeeCCCCCChhHHHHHHHHh
Confidence 7655 459999999999886 235889999999999999998666554443
No 112
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-34 Score=312.60 Aligned_cols=204 Identities=29% Similarity=0.487 Sum_probs=169.9
Q ss_pred HHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
+..++|.+.+.||+|+||.||+|... ..+|||+++.. .....+.|.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 34468889999999999999999864 36899988753 3344578999999999999999999999875 4567899
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 110 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999999754 346899999999999999999999998 999999999999999999999999999865321
Q ss_pred CCCCccccceeecccCCCCccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. .........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 186 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~ 241 (307)
T 3lb7_A 186 S-----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN 241 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred c-----ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC
Confidence 1 122233457999999999986 6678999999999999999999999997544
No 113
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.4e-34 Score=315.59 Aligned_cols=193 Identities=25% Similarity=0.368 Sum_probs=152.3
Q ss_pred CccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEEEcCCCCC
Q 003140 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~E~~~~gs 706 (845)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+++++++. ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999975 6899999998642 3567889999999996 9999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEEEEecCCcccCCCCCCCCc
Q 003140 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGI 783 (845)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~---~~kl~DFGla~~~~~~~~~~~ 783 (845)
|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 93 L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~----- 162 (325)
T 3kn6_A 93 LFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD----- 162 (325)
T ss_dssp HHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC-----
Confidence 99999764 46899999999999999999999998 99999999999998765 8999999999865422
Q ss_pred cccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 163 --~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 163 --NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred --CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 122334568999999999999999999999999999999999999997643
No 114
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.1e-35 Score=321.71 Aligned_cols=200 Identities=26% Similarity=0.387 Sum_probs=166.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||++... +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467889999999999999999976 789999999876433 335788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEEecCCcccCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPD 779 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~--~kl~DFGla~~~~~~~ 779 (845)
+++|+|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-- 170 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-- 170 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence 99999999997643 5899999999999999999999999 999999999999987765 99999999974321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCch-hhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+..++.+ +|||||||++|||++|+.||....
T Consensus 171 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 ------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred ------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 112234569999999999988887665 899999999999999999997643
No 115
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.3e-34 Score=308.23 Aligned_cols=207 Identities=21% Similarity=0.323 Sum_probs=178.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|.+.+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46788999999999999999996 579999999986533 234678899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEEecCCcccC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 775 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~-----~kl~DFGla~~~ 775 (845)
|+ +++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 99999999764 345899999999999999999999998 999999999999987776 999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..................||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 5433221111123345679999999999999999999999999999999999999998643
No 116
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.3e-35 Score=320.15 Aligned_cols=211 Identities=27% Similarity=0.404 Sum_probs=164.2
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCC-C---cEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~-g---~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
+.....++|.+.+.||+|+||.||+|.... + ..||||+++.. .....+++.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 334556789999999999999999999653 3 27999998754 33446789999999999999999999999987
Q ss_pred CCeE------EEEEEcCCCCCHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 003140 692 EGEQ------MLVYEFMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (845)
Q Consensus 692 ~~~~------~LV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~ 761 (845)
.+.. ++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.+
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCC
Confidence 7655 99999999999999996532 235899999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 762 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||...+
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 244 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE 244 (323)
T ss_dssp SCEEECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CCEEEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence 9999999999986543221 112233456789999999999999999999999999999999 999997544
No 117
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-34 Score=321.58 Aligned_cols=208 Identities=31% Similarity=0.437 Sum_probs=165.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCC--eE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG--EQ 695 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~--~~ 695 (845)
..++|.+.+.||+|+||.||+|... +|+.||||++... .....+++.+|+.+++++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999964 7899999998643 3344567889999999997 999999999997544 68
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++|||||+ |+|.++++. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999997 799999975 35889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCC--------------ccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEG--------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
....... ...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 3211000 001122344679999999999976 678999999999999999999999997654
No 118
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6e-35 Score=321.18 Aligned_cols=213 Identities=27% Similarity=0.358 Sum_probs=174.7
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC-----ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
++....++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45566788999999999999999999974 6889999988643 23445789999999999999999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhcc--------------------------------------CCCCCCHHHHHHHHHHHHH
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAK--------------------------------------SKEPLGFAMRLSIALGSSR 733 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~ 733 (845)
.+..++||||+++|+|.+++... ....+++..++.++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 0112457778889999999
Q ss_pred HHHHHHhCCCCCeEecCCCCCCEEEcCCC--cEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC--CCC
Q 003140 734 GILYLHTEADPPVFHRDIKASNILLDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKL 809 (845)
Q Consensus 734 gL~yLH~~~~~~iiHrDLk~~NILl~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~ 809 (845)
||+|||+.+ |+||||||+|||++.++ .+||+|||+++........ .........||+.|+|||++.+ ..+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhccCCCCC
Confidence 999999998 99999999999998776 8999999999865322111 1112345579999999999875 678
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 810 TDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 810 ~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+.++|||||||++|||++|+.||....
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~ 280 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVN 280 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999999997543
No 119
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=7.8e-35 Score=317.94 Aligned_cols=203 Identities=29% Similarity=0.472 Sum_probs=167.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCc----EEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~----~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
.++|...+.||+|+||.||+|.+. +++ .||+|.+... .....++|.+|++++++++||||+++++++.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356888999999999999999964 444 3688887643 3345678999999999999999999999998754 78
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
+|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997643 46899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
.... ........+|..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp TTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCcc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 3221 122233457889999999999999999999999999999999 99999754
No 120
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.6e-34 Score=312.90 Aligned_cols=200 Identities=28% Similarity=0.389 Sum_probs=177.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~------~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|.+.+.||+|+||.||+|... +|+.||||+++..... ..+++.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467888999999999999999975 6899999998754321 357899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEecCC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~----~~kl~DFGl 771 (845)
++||||+++|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999653 46899999999999999999999998 99999999999999887 799999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 166 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 221 (321)
T 2a2a_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221 (321)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCC
Confidence 98754321 123456899999999999999999999999999999999999999754
No 121
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.3e-34 Score=307.06 Aligned_cols=201 Identities=34% Similarity=0.515 Sum_probs=166.0
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCCh----hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~----~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|...+.||+|+||.||+|.+. |+.||||+++.... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999974 89999999875332 2346789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------CCcEEEEecC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--------KFTAKVADFG 770 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~--------~~~~kl~DFG 770 (845)
|||+++|+|.+++.. ..+++..++.++.|+++||+|||+++..+|+||||||+|||++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 46899999999999999999999988666999999999999986 6789999999
Q ss_pred CcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+++..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...+
T Consensus 162 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 218 (271)
T 3dtc_A 162 LAREWHRT---------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218 (271)
T ss_dssp C----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred cccccccc---------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99765321 1223468999999999999999999999999999999999999997644
No 122
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.8e-35 Score=311.71 Aligned_cols=205 Identities=28% Similarity=0.432 Sum_probs=165.2
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
...++|.+.+.||+|+||.||+|... .+..||+|+.+... ....+.+.+|++++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 34568888999999999999999864 25679999987543 334567999999999999999999999985 4578
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence 8999999999999999754 346899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.... ........+|+.|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 167 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~ 222 (281)
T 1mp8_A 167 EDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred Cccc------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence 4321 111233456789999999998999999999999999999997 999997543
No 123
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-34 Score=331.41 Aligned_cols=198 Identities=25% Similarity=0.347 Sum_probs=167.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------C
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~------~ 693 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999865 6899999998754 334467889999999999999999999999654 4
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++||||+++ +|.+.+.. .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999975 57676643 3889999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 213 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp ----C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 65321 22345679999999999999999999999999999999999999997654
No 124
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-35 Score=319.73 Aligned_cols=204 Identities=24% Similarity=0.363 Sum_probs=177.0
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh--------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~ 692 (845)
..++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346899999999999999999996 4789999999875431 1234678899999999999999999999999
Q ss_pred CeEEEEEEcCCCC-CHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003140 693 GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (845)
Q Consensus 693 ~~~~LV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGl 771 (845)
+..++||||+.+| +|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 999999654 35899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCc
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~~~ 838 (845)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....+.
T Consensus 177 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 236 (335)
T 3dls_A 177 AAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET 236 (335)
T ss_dssp CEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG
T ss_pred ceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH
Confidence 98764321 1234568999999999988776 88999999999999999999999765443
No 125
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.2e-34 Score=316.89 Aligned_cols=197 Identities=31% Similarity=0.511 Sum_probs=172.5
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4578889999999999999996 578999999987543 223467899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 9997 7888888653 346899999999999999999999998 99999999999999999999999999976532
Q ss_pred CCCccccceeecccCCCCccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 207 ---------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 257 (348)
T 1u5q_A 207 ---------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257 (348)
T ss_dssp ---------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ---------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 12346899999999984 5678999999999999999999999997543
No 126
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-34 Score=329.42 Aligned_cols=200 Identities=29% Similarity=0.432 Sum_probs=176.3
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999975 799999999865322 23467899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~- 169 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 169 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT-
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc-
Confidence 999999999999653 46899999999999999999999998 999999999999999999999999999875422
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 170 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 170 -------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp -------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 12234579999999999988765 789999999999999999999997543
No 127
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=317.02 Aligned_cols=203 Identities=25% Similarity=0.347 Sum_probs=169.8
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCC--CceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H--~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++| +||+++++++.+.+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4568889999999999999999988999999998643 33445789999999999976 9999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|| +.+|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred Ee-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 99 5689999999764 46899999999999999999999998 99999999999997 678999999999876432
Q ss_pred CCCCccccceeecccCCCCccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
. .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+
T Consensus 161 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 225 (343)
T 3dbq_A 161 T-----TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225 (343)
T ss_dssp --------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred c-----ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence 1 1122335579999999999865 6789999999999999999999999976433
No 128
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.8e-35 Score=308.37 Aligned_cols=203 Identities=32% Similarity=0.523 Sum_probs=178.2
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
..++|...+.||+|+||.||+|...+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3467888999999999999999998889999999986433 346899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 158 (267)
T ss_dssp CTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc--
Confidence 9999999999764 346899999999999999999999998 9999999999999999999999999998653211
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 209 (267)
T 3t9t_A 159 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 209 (267)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ----ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCC
Confidence 111223456788999999998999999999999999999999 89999754
No 129
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.4e-35 Score=318.87 Aligned_cols=210 Identities=27% Similarity=0.448 Sum_probs=179.7
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeCC------CcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEE
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYC 689 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~------g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~ 689 (845)
++....++|...+.||+|+||.||+|.... +..||||.+.... ....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455667889999999999999999999642 2479999987643 33456799999999999 899999999999
Q ss_pred eeCCeEEEEEEcCCCCCHHHHHhccC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 003140 690 DEEGEQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 757 (845)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NIL 757 (845)
.+.+..++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence 99999999999999999999997532 346899999999999999999999998 999999999999
Q ss_pred EcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 758 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 758 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
++.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCT-----TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ECCCCeEEECcccccccccccc-----ceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999998653221 1112233456789999999999999999999999999999999 99999754
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.4e-34 Score=306.53 Aligned_cols=200 Identities=21% Similarity=0.355 Sum_probs=173.5
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~LV 698 (845)
.++|...+.||+|+||.||+|.+. ++.||||+++... ....++|.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999984 8999999987543 34456899999999999999999999999877 788999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.++++......+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-- 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-- 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence 99999999999998766667999999999999999999999864 569999999999999999999999998875432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCc---hhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.....||+.|+|||.+.+..++. ++|||||||++|||++|+.||....
T Consensus 165 ----------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 215 (271)
T 3kmu_A 165 ----------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS 215 (271)
T ss_dssp ----------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred ----------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence 12245789999999998765444 8999999999999999999997543
No 131
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-34 Score=304.26 Aligned_cols=199 Identities=25% Similarity=0.401 Sum_probs=154.4
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 78999999987543 233567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+ +++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc-
Confidence 999 68888888654 45899999999999999999999998 999999999999999999999999999765422
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||....
T Consensus 166 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (275)
T 2eue_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 12234468999999999987765 789999999999999999999997543
No 132
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.7e-34 Score=303.75 Aligned_cols=201 Identities=27% Similarity=0.439 Sum_probs=176.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|.+.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468899999999999999999975 6899999998653 3334567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCCcccCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 776 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~---~kl~DFGla~~~~ 776 (845)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 999999999988764 35899999999999999999999998 999999999999986655 9999999997654
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 160 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 211 (284)
T 3kk8_A 160 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 211 (284)
T ss_dssp SSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence 221 1234568999999999999999999999999999999999999996543
No 133
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=342.95 Aligned_cols=209 Identities=31% Similarity=0.473 Sum_probs=181.5
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.+.+++..++|.+.+.||+|+||.||+|.+.++..||||+++... ...++|.+|+++|++++|+||+++++++.+ +..
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 344556677889999999999999999999888899999998644 345689999999999999999999999876 678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999997654556899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
.... ........++..|+|||++....++.++|||||||++|||++ |+.||...
T Consensus 414 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 414 EDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp CCHH------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CCCc------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4211 111223456788999999999999999999999999999999 99999754
No 134
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.7e-34 Score=314.58 Aligned_cols=207 Identities=28% Similarity=0.505 Sum_probs=177.3
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC--------CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEe
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~ 690 (845)
...++|.+.+.||+|+||.||+|... ++..||||+++... ....+++.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 44578889999999999999999863 46789999997643 34457799999999999 8999999999999
Q ss_pred eCCeEEEEEEcCCCCCHHHHHhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCE
Q 003140 691 EEGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (845)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NI 756 (845)
+.+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceE
Confidence 99999999999999999999976432 34899999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 757 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
|++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 999999999999999987643221 111233457789999999998899999999999999999999 99999754
No 135
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.2e-34 Score=310.06 Aligned_cols=199 Identities=26% Similarity=0.413 Sum_probs=166.1
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHh--cCCCceeeEEEEEeeC----CeEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE----GEQM 696 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~g~~~~~----~~~~ 696 (845)
.++|.+.+.||+|+||.||+|.. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46788999999999999999998 6899999998653 34566777777776 7999999999987542 4589
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 768 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDLk~~NILl~~~~~~kl~D 768 (845)
+||||+++|+|.++++. ..+++..++.++.|+++||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999954 36899999999999999999999 666 99999999999999999999999
Q ss_pred cCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCC
Q 003140 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 832 (845)
Q Consensus 769 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~elltG----------~~Pf 832 (845)
||+|+........ .........||+.|+|||++.+. .++.++|||||||++|||+|| +.||
T Consensus 157 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 157 LGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp CTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred CCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999765432210 01112334799999999999876 455799999999999999999 8888
Q ss_pred CC
Q 003140 833 SH 834 (845)
Q Consensus 833 ~~ 834 (845)
..
T Consensus 234 ~~ 235 (301)
T 3q4u_A 234 YD 235 (301)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 136
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-34 Score=309.81 Aligned_cols=201 Identities=28% Similarity=0.429 Sum_probs=171.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999975 589999998865432 235678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++++|.++++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 99999999988653 45899999999999999999999998 9999999999999999999999999998754221
Q ss_pred CCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 207 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 12234568999999999876 678999999999999999999999997654
No 137
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.8e-35 Score=316.89 Aligned_cols=203 Identities=28% Similarity=0.474 Sum_probs=170.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcE----EEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTV----VAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~----vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++|...+.||+|+||.||+|.+. +++. ||+|.+.... ....+++.+|+.++++++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888899999999999999964 4443 8888875432 233456788999999999999999999986 467899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999764 346889999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
... ........||..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 168 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 222 (325)
T 3kex_A 168 DDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222 (325)
T ss_dssp CTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred ccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence 321 122344567889999999999999999999999999999999 999997543
No 138
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.5e-34 Score=305.29 Aligned_cols=200 Identities=30% Similarity=0.457 Sum_probs=173.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888999999999999999865 578999999864322 2346789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 9999999999999765 35899999999999999999999998 999999999999999999999999998654321
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
......||..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 1234568999999999999999999999999999999999999997543
No 139
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-34 Score=342.26 Aligned_cols=204 Identities=22% Similarity=0.349 Sum_probs=178.2
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 695 (845)
...++|.+.+.||+|+||.||+|... +++.||||+++... ....+.+..|.+++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34568999999999999999999975 68899999987432 22345788899999988 799999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.++++... .+++..++.++.||+.||+|||+.+ ||||||||+|||++.++++||+|||+|+..
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 99999999999999997653 5899999999999999999999998 999999999999999999999999999864
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 493 ~~~-------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 493 IWD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CCT-------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccC-------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 322 122345679999999999999999999999999999999999999997643
No 140
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-34 Score=327.64 Aligned_cols=199 Identities=28% Similarity=0.421 Sum_probs=155.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----CeE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~ 695 (845)
++|.+.+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++... +..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67899999999999999999965 7899999998653 334457899999999999999999999998443 578
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+ +|+|.++++.. ..+++..+..++.||++||+|||+.+ ||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 58999999653 46899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCcc--------------------ccceeecccCCCCccchhhh-cCCCCCchhhHHHHHHHHHHHHhC
Q 003140 776 PVPDIEGIV--------------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTG 828 (845)
Q Consensus 776 ~~~~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~elltG 828 (845)
......... .....+...||++|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 432211000 01123456789999999986 466799999999999999999994
No 141
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.7e-34 Score=321.28 Aligned_cols=201 Identities=24% Similarity=0.339 Sum_probs=169.8
Q ss_pred cCCCCCccccccCceEEEEEEeCCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcC--CCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.+|.+.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999888999999998643 3344578999999999996 599999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
| +.+|+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56899999997643 6889999999999999999999998 99999999999995 5899999999998764221
Q ss_pred CCCccccceeecccCCCCccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 209 -----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 209 -----TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp ----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred -----ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 1112334579999999999865 468999999999999999999999997643
No 142
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-35 Score=320.79 Aligned_cols=202 Identities=28% Similarity=0.350 Sum_probs=172.9
Q ss_pred hcCCCCCccccccCceEEEEEEe----CCCcEEEEEEccCCC----hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~----~~g~~vAVK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~ 693 (845)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999997 378999999986532 12345677899999999 6999999999999999
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999764 35899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 208 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 208 EFVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp ECCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred ecccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 653211 222334579999999999985 45789999999999999999999999754
No 143
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.6e-34 Score=313.80 Aligned_cols=214 Identities=24% Similarity=0.357 Sum_probs=182.8
Q ss_pred cccchHHHHHHhcCCCCC-ccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhc-CCCceeeEE
Q 003140 612 RSFTYGEMALATNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLV 686 (845)
Q Consensus 612 ~~~~~~~~~~~~~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l-~H~nIv~l~ 686 (845)
....+.......++|.+. +.||+|+||.||+|... +|+.||||+++... ....+++.+|+++++++ +||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 445566666777788877 89999999999999975 68999999987532 33467899999999999 579999999
Q ss_pred EEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCc
Q 003140 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFT 763 (845)
Q Consensus 687 g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~ 763 (845)
+++.+.+..++||||+++|+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+|||++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999999997766678999999999999999999999998 999999999999987 789
Q ss_pred EEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 764 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+||+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 173 ~kL~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHA--------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp EEECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEEeeCccccccCCc--------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999875422 11234568999999999999999999999999999999999999997644
No 144
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=305.71 Aligned_cols=201 Identities=28% Similarity=0.508 Sum_probs=156.6
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688899999999999999996 4799999999864321 22467899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999754 346899999999999999999999998 9999999999999999999999999998654221
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 167 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 167 -------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred -------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 1123356899999999999889999999999999999999999999754
No 145
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.4e-34 Score=309.86 Aligned_cols=198 Identities=24% Similarity=0.396 Sum_probs=172.6
Q ss_pred hcCCCCCccccccCceEEEEEEeCC-C-------cEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPD-G-------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~-g-------~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 694 (845)
.++|...+.||+|+||.||+|.... + ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3578889999999999999998642 3 5799999977666667889999999999999999999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--------EEE
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKV 766 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~--------~kl 766 (845)
.++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999764 334899999999999999999999999 999999999999998887 999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
+|||+++.... .....||..|+|||++.+ ..++.++|||||||++|||++|..|+...
T Consensus 163 ~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 163 SDPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp CCCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 99999875421 123457899999999987 77999999999999999999966655443
No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.4e-35 Score=317.20 Aligned_cols=214 Identities=28% Similarity=0.453 Sum_probs=182.3
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEeC------CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLV 686 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~------~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~ 686 (845)
+..+++....++|.+.+.||+|+||.||+|... +++.||||++.... .....++.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 444566677889999999999999999999864 37889999987543 33456799999999999999999999
Q ss_pred EEEeeCCeEEEEEEcCCCCCHHHHHhccC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 003140 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (845)
Q Consensus 687 g~~~~~~~~~LV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl 758 (845)
+++.+.+..++||||+++|+|.++++... ...+++..++.++.|+++||+|||+++ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999997532 245789999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 759 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
+.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETD-----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGG-----CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred cCCCeEEECcCcccccccccc-----ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 999999999999997643211 0111223456889999999999999999999999999999999 89999754
No 147
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.8e-34 Score=306.09 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=170.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
++|...+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 57888999999999999999975 68999999986533 33467899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCC
Q 003140 702 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 702 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~ 776 (845)
+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988653 3457999999999999999999999998 9999999999999 456789999999997654
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.. .......||..|+|||.+. ..++.++|||||||++|||++|+.||...
T Consensus 179 ~~--------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 179 SD--------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp ----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cc--------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 22 1233456899999999875 57899999999999999999999999754
No 148
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3e-34 Score=341.37 Aligned_cols=298 Identities=21% Similarity=0.351 Sum_probs=207.7
Q ss_pred CcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCC-CCC-CCccccccc------ccchhhhccCCCCCCCCCC--c
Q 003140 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK-ISG-SIPKEIGNI------KSLELLLLNGNELTGSLPE--E 149 (845)
Q Consensus 80 ~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~ 149 (845)
...+++.|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 34578999999999999999999999999999999998 998 889888887 89999999999998 8888 8
Q ss_pred cCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCC-cceeeccccccccCCCcccCCCC--
Q 003140 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS-LVHMLLDNNNLTGYLPPELSELP-- 226 (845)
Q Consensus 150 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~~l~~l~-- 226 (845)
++++++|++|+|++|+++|.+| .+.++++|+.|+|++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~ 402 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVS 402 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSS
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccC
Confidence 8999999999999999988888 7888888888888888877 67777777777 777777777777 6666666544
Q ss_pred CCcEEEccCCcCCCCCCccccc-------cCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCc-c
Q 003140 227 KLLILQLDNNNFEGTTIPASYS-------NMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-L 297 (845)
Q Consensus 227 ~L~~L~Ls~N~l~~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~ 297 (845)
+|++|+|++|++++ ..|..+. .+++|+.|+|++|+++..++. +..+++|+.|+|++|+++ .+|...+. .
T Consensus 403 ~L~~L~Ls~N~l~~-~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~ 480 (636)
T 4eco_A 403 VMSAIDFSYNEIGS-VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE 480 (636)
T ss_dssp CEEEEECCSSCTTT-TTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET
T ss_pred ccCEEECcCCcCCC-cchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc
Confidence 67777777777766 4566665 566667777777766655443 334566666666666666 45544332 1
Q ss_pred --------ccCEEEccCCcCCCCcccccC--CCCCCCeEecccccCcccCChhhhhhccCC-------------------
Q 003140 298 --------NITTIKLSNNKLTGTIPSNFS--GLPRLQRLFIANNSLSGSIPSSIWQSRTLN------------------- 348 (845)
Q Consensus 298 --------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~------------------- 348 (845)
+|+.|+|++|+|+ .+|..+. .+++|++|+|++|++++ +|..+..+..|+
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~ 558 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREW 558 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCC
T ss_pred cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccC
Confidence 5666666666666 4555554 56666666666666664 555554433222
Q ss_pred ------CCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccc
Q 003140 349 ------ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 386 (845)
Q Consensus 349 ------~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c 386 (845)
.++|+.|+|++|+|+.+|..+. +.+..|++++||+.|
T Consensus 559 p~~l~~l~~L~~L~Ls~N~l~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 559 PEGITLCPSLTQLQIGSNDIRKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp CTTGGGCSSCCEEECCSSCCCBCCSCCC-TTCCEEECCSCTTCE
T ss_pred hHHHhcCCCCCEEECCCCcCCccCHhHh-CcCCEEECcCCCCcc
Confidence 1223355555555555554433 455555555555543
No 149
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.1e-34 Score=302.52 Aligned_cols=201 Identities=26% Similarity=0.412 Sum_probs=174.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~------~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|...+.||+|+||.||+|... +|+.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356888999999999999999976 689999999875322 1357899999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC----cEEEEecCC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~----~~kl~DFGl 771 (845)
++||||+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999999764 35899999999999999999999998 99999999999998877 899999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 159 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 159 AHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp CEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 98654221 1234468999999999999999999999999999999999999997543
No 150
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-33 Score=303.78 Aligned_cols=200 Identities=24% Similarity=0.405 Sum_probs=176.7
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56888999999999999999976 5889999988643 2334567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 95 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 95 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp ECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 999999999998664 35899999999999999999999998 9999999999999999999999999998654221
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 170 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 170 -------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp -------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1123456899999999999989999999999999999999999999754
No 151
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=324.60 Aligned_cols=200 Identities=28% Similarity=0.403 Sum_probs=173.3
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--eEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 57888999999999999999976 58999999987543 234567889999999999999999999998765 789999
Q ss_pred EcCCCCCHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEEecCCccc
Q 003140 700 EFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSRL 774 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl----~~~~~~kl~DFGla~~ 774 (845)
||+++|+|.++++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997643 334899999999999999999999998 9999999999999 7788899999999987
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcC--------CCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
.... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 166 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 166 LEDD--------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp CCCG--------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred ccCC--------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 5421 12234569999999999865 5678899999999999999999999964
No 152
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.9e-34 Score=312.87 Aligned_cols=215 Identities=27% Similarity=0.470 Sum_probs=182.4
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCCCh-hhHHHHHHHHHHHHhc-CCCceeeE
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 685 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~nIv~l 685 (845)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44556667778999999999999999999984 3568999999876433 3456799999999999 79999999
Q ss_pred EEEEeeCC-eEEEEEEcCCCCCHHHHHhccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecC
Q 003140 686 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 750 (845)
Q Consensus 686 ~g~~~~~~-~~~LV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrD 750 (845)
++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99997755 58999999999999999976542 23889999999999999999999998 99999
Q ss_pred CCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CC
Q 003140 751 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 829 (845)
Q Consensus 751 Lk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~ 829 (845)
|||+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++|||||||++|||+| |+
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccceEEECCCCCEEECCCccccccccCc-----cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998654321 1122334567889999999999999999999999999999998 99
Q ss_pred CCCCCCC
Q 003140 830 QPISHGK 836 (845)
Q Consensus 830 ~Pf~~~~ 836 (845)
.||....
T Consensus 249 ~p~~~~~ 255 (316)
T 2xir_A 249 SPYPGVK 255 (316)
T ss_dssp CSSTTCC
T ss_pred CCCcccc
Confidence 9997543
No 153
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.7e-34 Score=310.35 Aligned_cols=200 Identities=24% Similarity=0.405 Sum_probs=176.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 56888899999999999999975 5889999998643 2334567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++++|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 121 e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 121 ELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 999999999998764 35899999999999999999999998 9999999999999999999999999998654221
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 196 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 196 -------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp -------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred -------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 1123456899999999999999999999999999999999999999754
No 154
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=317.71 Aligned_cols=206 Identities=21% Similarity=0.235 Sum_probs=167.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCChhh-----------HHHHHHHHHHHHhcCCCceeeEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-----------EKEFLTEIQFLSRLHHRNLVSLVG 687 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~~~~-----------~~~~~~Ei~~l~~l~H~nIv~l~g 687 (845)
.++|.+.+.||+|+||.||+|... ++..||||+........ .+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357888999999999999999975 57889999987543211 134678899999999999999999
Q ss_pred EEee----CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-
Q 003140 688 YCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF- 762 (845)
Q Consensus 688 ~~~~----~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~- 762 (845)
++.. ....++||||+ +++|.+++.... .+++..++.++.||++||+|||+.+ |+||||||+|||++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9987 67899999999 999999997654 6899999999999999999999998 99999999999999887
Q ss_pred -cEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 763 -TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 763 -~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
.+||+|||+++....................||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999999999987643211111111122445799999999999999999999999999999999999999964
No 155
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.1e-34 Score=313.15 Aligned_cols=204 Identities=30% Similarity=0.431 Sum_probs=177.9
Q ss_pred hcCCCCCccccccCceEEEEEEe-----CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEe--eCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~ 695 (845)
.++|...+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36788899999999999999984 368899999998877667778999999999999999999999986 45678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999999997643 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
..... .........||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 178 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 178 PLDKD----YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp CTTCS----EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccCCc----cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 43221 11222345688889999999998999999999999999999999999854
No 156
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.7e-34 Score=322.10 Aligned_cols=205 Identities=29% Similarity=0.380 Sum_probs=168.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----Ce
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~ 694 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 368999999999999999999965 6899999998753 334457899999999999999999999999766 57
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.++||||++ |+|.++++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999996 6999999653 46899999999999999999999999 99999999999999999999999999987
Q ss_pred CCCCCCCCcc---------------ccceeecccCCCCccchhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 775 APVPDIEGIV---------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 775 ~~~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
.......... .....+...||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6432211000 00123566899999999986 56679999999999999999998655543
No 157
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.2e-34 Score=305.12 Aligned_cols=197 Identities=29% Similarity=0.470 Sum_probs=174.0
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee---------
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------- 691 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~--------- 691 (845)
..++|...+.||+|+||.||+|... +|+.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467888999999999999999976 79999999987643 356789999999999999999998854
Q ss_pred -------CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 003140 692 -------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (845)
Q Consensus 692 -------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~ 764 (845)
....++||||+++|+|.+++.......+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445799999999999999998765667999999999999999999999998 9999999999999999999
Q ss_pred EEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 765 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
||+|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 162 kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred EECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999998764321 1233468999999999999999999999999999999999999875
No 158
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-33 Score=312.94 Aligned_cols=207 Identities=26% Similarity=0.417 Sum_probs=178.6
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--------hhHHHHHHHHHHHHhc-CCCceeeEE
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRL-HHRNLVSLV 686 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--------~~~~~~~~Ei~~l~~l-~H~nIv~l~ 686 (845)
.......++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344555678999999999999999999985 799999999865431 1135678999999999 799999999
Q ss_pred EEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEE
Q 003140 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (845)
Q Consensus 687 g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl 766 (845)
+++...+..++||||+++|+|.+++... ..+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEE
Confidence 9999999999999999999999999754 35899999999999999999999998 999999999999999999999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 242 ~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 309 (365)
T 2y7j_A 242 SDFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR 309 (365)
T ss_dssp CCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence 9999998764221 1234578999999999863 358889999999999999999999997543
No 159
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=313.55 Aligned_cols=201 Identities=26% Similarity=0.450 Sum_probs=167.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhh-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~-~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
++|...+.||+|+||.||+|... +++.||||++....... ...+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57888999999999999999975 78999999987543222 22456899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
++ |+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--- 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP--- 153 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC---
Confidence 97 6999998764 346899999999999999999999998 999999999999999999999999999865322
Q ss_pred CccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 154 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (324)
T 3mtl_A 154 ----TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ----ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 112234568999999999876 568999999999999999999999997643
No 160
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4e-34 Score=316.64 Aligned_cols=200 Identities=26% Similarity=0.433 Sum_probs=175.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357888999999999999999975 6899999998764 33445789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
|+++|+|.+++.... .+++..+..++.|+++||+|||+. + |+||||||+|||++.++.+||+|||+++...
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~--- 183 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--- 183 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHH---
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccc---
Confidence 999999999997653 588999999999999999999985 7 9999999999999999999999999986542
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 184 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 234 (360)
T 3eqc_A 184 ------DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD 234 (360)
T ss_dssp ------HHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred ------cccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112234578999999999999999999999999999999999999997544
No 161
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.6e-34 Score=321.19 Aligned_cols=199 Identities=23% Similarity=0.308 Sum_probs=175.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhc------CCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL------HHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l------~H~nIv~l~g~~~~~~~~ 695 (845)
..+|.+.+.||+|+||.||+|... +++.||||+++.. ....+++.+|+++++.+ +|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 357889999999999999999865 5899999999763 33456788888888887 577999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc--EEEEecCCcc
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSR 773 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~--~kl~DFGla~ 773 (845)
++||||++ |+|.+++.......+++..+..++.||++||+|||+.+ |+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 79999998876667999999999999999999999998 999999999999999987 9999999997
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 251 ~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 64321 234568999999999999999999999999999999999999997654
No 162
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-34 Score=317.33 Aligned_cols=197 Identities=26% Similarity=0.426 Sum_probs=166.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~------ 693 (845)
.++|...+.||+|+||.||+|... +|+.||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888999999999999999974 7999999998653 2334567899999999999999999999997653
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++||||+ +++|.++++. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 8999999975 35899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 177 ~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 230 (367)
T 1cm8_A 177 QADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230 (367)
T ss_dssp ECCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65321 234568999999999887 689999999999999999999999997654
No 163
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.3e-34 Score=303.19 Aligned_cols=200 Identities=35% Similarity=0.584 Sum_probs=170.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhh-------HHHHHHHHHHHHhcCCCceeeEEEEEeeCCe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~-------~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 694 (845)
.++|...+.||+|+||.||+|... +++.||||++....... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999974 78999999986533221 167899999999999999999999997665
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-----EEEEec
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADF 769 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~-----~kl~DF 769 (845)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ ++|+||||||+|||++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999988654 346899999999999999999999875 45999999999999988776 999999
Q ss_pred CCcccCCCCCCCCccccceeecccCCCCccchhhh--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF--LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+++.... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||....
T Consensus 174 g~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 174 GLSQQSVH----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp TTCBCCSS----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred Cccccccc----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 99975321 23345789999999998 35567899999999999999999999997543
No 164
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6e-34 Score=307.46 Aligned_cols=199 Identities=25% Similarity=0.431 Sum_probs=173.8
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|.+.+.||+|+||.||++... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457888999999999999999975 7899999999865555566789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~~~ 778 (845)
+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 9999999998664 35889999999999999999999998 9999999999999 78899999999998754311
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 163 ---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp ---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 123346899999999999999999999999999999999999999754
No 165
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.1e-34 Score=307.73 Aligned_cols=203 Identities=24% Similarity=0.333 Sum_probs=167.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999975 689999999875432 2346789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999764 35899999999999999999999998 999999999999999999999999999765432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
. ........||..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 188 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (309)
T 2h34_A 188 K------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ 239 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred c------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence 1 111234568999999999999999999999999999999999999997543
No 166
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=308.51 Aligned_cols=197 Identities=30% Similarity=0.492 Sum_probs=164.4
Q ss_pred cCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcCC
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~~ 703 (845)
++|++.+.||+|+||.||+|... ++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 56788899999999999999984 789999998753 345689999999999999999999998874 4789999999
Q ss_pred CCCHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc-EEEEecCCcccCCCCCCC
Q 003140 704 NGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-AKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 704 ~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~-~kl~DFGla~~~~~~~~~ 781 (845)
+|+|.++++.... ..+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999976533 34789999999999999999999943233999999999999998886 799999999754311
Q ss_pred CccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 160 -------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 160 -------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred -------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 22345899999999999999999999999999999999999999754
No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.4e-34 Score=303.13 Aligned_cols=199 Identities=28% Similarity=0.448 Sum_probs=175.8
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 68899999986432 123467899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999997653 5899999999999999999999998 999999999999999999999999998764321
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 168 --------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 168 --------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp --------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 1234568999999999999999999999999999999999999997543
No 168
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.3e-33 Score=336.07 Aligned_cols=312 Identities=20% Similarity=0.222 Sum_probs=219.1
Q ss_pred EeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccc---------------------------------cccc
Q 003140 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEI---------------------------------GNIK 130 (845)
Q Consensus 84 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~---------------------------------~~l~ 130 (845)
++.|++++|.+++..+..|+.+++|++|+|++|++++..|..| ..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 6677777777776666667777777777777776665555444 4445
Q ss_pred cchhhhccCCCCCCCCCCccCCCCccceeecccc----------------------------cccCCCCccccCccCCCE
Q 003140 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN----------------------------YISGSLPKSFANLNKTRH 182 (845)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N----------------------------~l~~~~p~~~~~l~~L~~ 182 (845)
+|++|+|++|++++..|..|.++++|++|+|++| ++++..|..|.++++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 5555555666666555555555555555554433 333344455555556666
Q ss_pred EEccCCCCCCCCc-cccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC-CCCccccccCCCccEEEccc
Q 003140 183 FHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG-TTIPASYSNMSKLLKLSLRN 260 (845)
Q Consensus 183 L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~p~~~~~l~~L~~L~Ls~ 260 (845)
|+|++|.+++.+| ..+..+++|++|++++|++++..+..|..+++|+.|++++|.+++ ...|..+.++++|+.|+|++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 6666666554443 455556666666666666665555566666666666666666642 14677888999999999999
Q ss_pred CCCCCCCCC-CCCCCCccEEEcccccCCcCCCC---------CCCccccCEEEccCCcCCCCcccccCCCCCCCeEeccc
Q 003140 261 CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPP---------GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330 (845)
Q Consensus 261 N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~---------~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 330 (845)
|++++.++. +..+++|+.|++++|++++..+. .....+|+.|+|++|+++...+..|.++++|+.|+|++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 999987775 88899999999999999854221 12234899999999999966666799999999999999
Q ss_pred ccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC---CCCCCcEEEecCCcccccCCC-ccccCCCCCC
Q 003140 331 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNTNA-EQFCGSHSDD 400 (845)
Q Consensus 331 N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~---~~~~l~~l~l~~Np~~c~~~~-~~~~~~~~~~ 400 (845)
|++++..+..+..+ ++|+.|+|++|+|+.++... .++.+..+++++|||.|+|+. .+|..|....
T Consensus 570 N~l~~l~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~ 638 (680)
T 1ziw_A 570 NNLNTLPASVFNNQ-----VSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINET 638 (680)
T ss_dssp SCCCCCCTTTTTTC-----TTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC
T ss_pred CCCCcCCHhHhCCC-----CCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHhc
Confidence 99995544445444 45669999999999988763 478999999999999999996 9999887443
No 169
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=320.31 Aligned_cols=204 Identities=17% Similarity=0.235 Sum_probs=173.3
Q ss_pred cCCCCCccccccCceEEEEEEeCC---------CcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceee----------
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS---------- 684 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~---------g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~---------- 684 (845)
++|.+.+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 678889999999999999999763 789999998753 36889999999999999987
Q ss_pred -----EEEEEee-CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 003140 685 -----LVGYCDE-EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (845)
Q Consensus 685 -----l~g~~~~-~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl 758 (845)
+++++.. .+..++||||+ +|+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+|||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEE
Confidence 6777776 67889999999 999999998764567999999999999999999999998 9999999999999
Q ss_pred cCCC--cEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 759 DHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 759 ~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+.++ .+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 99999999998764322111111112244579999999999999999999999999999999999999997653
No 170
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.9e-34 Score=307.04 Aligned_cols=202 Identities=29% Similarity=0.440 Sum_probs=172.2
Q ss_pred cCCCCCccccccCceEEEEEEe-----CCCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CeE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~ 695 (845)
.+|+..+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999983 368999999987543 33457899999999999999999999999876 668
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999996543 45899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
..... .........||..|+|||.+.+..++.++||||||+++|||++|+.|+.
T Consensus 177 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 177 ETDKE----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp CTTCC----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cCCCc----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 43221 1122334568888999999999999999999999999999999999864
No 171
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8.2e-34 Score=305.43 Aligned_cols=202 Identities=31% Similarity=0.479 Sum_probs=174.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999975 789999999865432 223678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|++ |+|.+++.......+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 79999998776667899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CCccccceeecccCCCCccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......+|..|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 208 (299)
T 2r3i_A 158 ------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208 (299)
T ss_dssp ------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 1123346789999999998765 7999999999999999999999997654
No 172
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-33 Score=302.38 Aligned_cols=204 Identities=30% Similarity=0.479 Sum_probs=173.7
Q ss_pred cCCCCCc-cccccCceEEEEEEeC---CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 624 NNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 624 ~~f~~~~-~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
++|.+.+ .||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4555555 8999999999999853 57889999998643 34467899999999999999999999999 55678999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999653 346899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.. .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 164 ~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 218 (287)
T 1u59_A 164 DS----YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218 (287)
T ss_dssp SC----EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cc----eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 21 0111233456889999999998899999999999999999998 999997543
No 173
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.8e-34 Score=302.79 Aligned_cols=205 Identities=27% Similarity=0.418 Sum_probs=176.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467888999999999999999975 78999999986432 3345788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++|+|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 159 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN- 159 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT-
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc-
Confidence 99999999988543 45899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.........||..|+|||.+.+..+ +.++||||||+++|||++|+.||....+
T Consensus 160 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 213 (276)
T 2yex_A 160 ----RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (276)
T ss_dssp ----EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred ----chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch
Confidence 1112234568999999999987665 7799999999999999999999976543
No 174
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.8e-34 Score=314.06 Aligned_cols=197 Identities=26% Similarity=0.431 Sum_probs=170.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|...+.||+|+||.||+|... +|+.||||+++.... .+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 467889999999999999999975 689999999876432 245688888888 79999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC----CcEEEEecCCcccCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRLAP 776 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~----~~~kl~DFGla~~~~ 776 (845)
|+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+++...
T Consensus 97 ~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 97 LMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred CCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999654 45899999999999999999999998 9999999999998543 359999999998654
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 223 (342)
T 2qr7_A 172 AEN-------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223 (342)
T ss_dssp CTT-------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred CCC-------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC
Confidence 221 1223457899999999998888999999999999999999999999754
No 175
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=302.88 Aligned_cols=201 Identities=26% Similarity=0.385 Sum_probs=171.9
Q ss_pred CCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcCC
Q 003140 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~~ 703 (845)
+|.....||+|+||.||+|.. .+++.||||.+........+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455567899999999999996 4689999999987666666789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-CCcEEEEecCCcccCCCCCCC
Q 003140 704 NGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 704 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~-~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999997653 345778999999999999999999998 999999999999987 8999999999998654221
Q ss_pred CccccceeecccCCCCccchhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 178 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 178 -----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred -----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 112345689999999998764 3889999999999999999999999653
No 176
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.5e-34 Score=312.22 Aligned_cols=202 Identities=25% Similarity=0.425 Sum_probs=166.1
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChh--hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~--~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
..++|.+.+.||+|+||.||+|... +++.||||+++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3467889999999999999999964 7899999998754332 245688999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-----CCCcEEEEecCCcc
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-----HKFTAKVADFGLSR 773 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-----~~~~~kl~DFGla~ 773 (845)
|||++ |+|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+|||++ .++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99997 69999997643 4899999999999999999999998 99999999999994 55569999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... ........||..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 186 ~~~~~-------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 242 (329)
T 3gbz_A 186 AFGIP-------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242 (329)
T ss_dssp HHC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccCCc-------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence 65322 1123345679999999999874 58999999999999999999999997644
No 177
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.3e-34 Score=304.51 Aligned_cols=205 Identities=29% Similarity=0.489 Sum_probs=163.8
Q ss_pred HHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 620 ALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 620 ~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++..++|.+.+.||+|+||.||+|... ..||||+++... ....+.|.+|++++++++||||+++++++ ..+..++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 344578999999999999999999864 359999987543 34457899999999999999999999965 4556899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 99999999999999654 346899999999999999999999998 99999999999999999999999999976532
Q ss_pred CCCCCccccceeecccCCCCccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.. .........||+.|+|||.+. ...++.++||||||+++|||++|+.||....
T Consensus 173 ~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 229 (289)
T 3og7_A 173 WS-----GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229 (289)
T ss_dssp ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cc-----ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc
Confidence 21 112233456899999999986 5678899999999999999999999997644
No 178
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=9.9e-34 Score=302.09 Aligned_cols=203 Identities=28% Similarity=0.464 Sum_probs=171.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeCC----CcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
..++|...+.||+|+||.||+|.+.+ +..||||.+... .....+++.+|++++++++||||+++++++.+. ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 45678889999999999999998642 346999998764 334567899999999999999999999998754 568
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
+||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 45899999999999999999999998 9999999999999999999999999998754
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
... ........+|..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 165 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~ 218 (281)
T 3cc6_A 165 DED------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL 218 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccc------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence 322 111233457889999999998999999999999999999998 99999643
No 179
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.4e-34 Score=316.44 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=167.7
Q ss_pred HHHhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------
Q 003140 620 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (845)
Q Consensus 620 ~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~------ 692 (845)
....++|...+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999996 4799999999865422 234799999999999999999998443
Q ss_pred --------------------------------CeEEEEEEcCCCCCHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHH
Q 003140 693 --------------------------------GEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYL 738 (845)
Q Consensus 693 --------------------------------~~~~LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 738 (845)
...++||||++ |+|.+.+.. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 688888764 3456799999999999999999999
Q ss_pred HhCCCCCeEecCCCCCCEEEc-CCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHH
Q 003140 739 HTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVY 816 (845)
Q Consensus 739 H~~~~~~iiHrDLk~~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dvw 816 (845)
|+.+ |+||||||+|||++ .++.+||+|||+|+...... ......||..|+|||.+.+. .++.++|||
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 9998 99999999999998 68999999999998654221 22345689999999998765 489999999
Q ss_pred HHHHHHHHHHhCCCCCCCCC
Q 003140 817 SLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 817 S~Gvvl~elltG~~Pf~~~~ 836 (845)
|+||++|||++|+.||....
T Consensus 227 slG~il~ell~g~~pf~~~~ 246 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGET 246 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSS
T ss_pred hHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999997654
No 180
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.1e-33 Score=306.74 Aligned_cols=195 Identities=22% Similarity=0.401 Sum_probs=171.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEee--CCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--EGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~--~~~~~LV~ 699 (845)
++|++.+.||+|+||.||+|.. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 6788899999999999999986 478999999987533 467899999999997 9999999999987 66789999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC-cEEEEecCCcccCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVP 778 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~-~~kl~DFGla~~~~~~ 778 (845)
||+++++|.++++. +++..+..++.|+++||+|||+.+ |+||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp ECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred eccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999853 788999999999999999999998 99999999999999776 8999999999865422
Q ss_pred CCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
. ......||..|+|||.+.+ ..++.++|||||||++|||++|+.||..+.+
T Consensus 185 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~ 236 (330)
T 3nsz_A 185 Q--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 236 (330)
T ss_dssp C--------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred C--------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 1 1234568899999999877 6789999999999999999999999976554
No 181
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.4e-33 Score=302.58 Aligned_cols=200 Identities=30% Similarity=0.442 Sum_probs=177.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
.+.|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999864 68999999987543 3446789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++++|.+++.. ..+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999964 46899999999999999999999998 9999999999999999999999999997654221
Q ss_pred CCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.......||..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 174 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 222 (303)
T 3a7i_A 174 ------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222 (303)
T ss_dssp ------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence 1123456899999999999999999999999999999999999999754
No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=8.4e-35 Score=324.22 Aligned_cols=199 Identities=17% Similarity=0.192 Sum_probs=164.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCC---ChhhHHHHHHHH---HHHHhcCCCceeeEE-------EE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEI---QFLSRLHHRNLVSLV-------GY 688 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~---~~~~~~~~~~Ei---~~l~~l~H~nIv~l~-------g~ 688 (845)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999998732 334457899999 555566899999998 66
Q ss_pred EeeCCe-----------------EEEEEEcCCCCCHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 003140 689 CDEEGE-----------------QMLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPV 746 (845)
Q Consensus 689 ~~~~~~-----------------~~LV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 746 (845)
+.+.+. .++||||+ +|+|.+++.... ...+++..++.|+.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665532 78999999 689999997632 123446888899999999999999998 9
Q ss_pred EecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-----------CCCchhhH
Q 003140 747 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----------KLTDKSDV 815 (845)
Q Consensus 747 iHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv 815 (845)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC----------CcccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999998532 12344567 999999999887 89999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCC
Q 003140 816 YSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 816 wS~Gvvl~elltG~~Pf~~~~ 836 (845)
|||||++|||++|+.||....
T Consensus 297 wSlG~il~elltg~~Pf~~~~ 317 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITKDA 317 (377)
T ss_dssp HHHHHHHHHHHHSSCCC----
T ss_pred HHHHHHHHHHHHCCCCCcccc
Confidence 999999999999999996533
No 183
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-33 Score=314.20 Aligned_cols=198 Identities=24% Similarity=0.354 Sum_probs=164.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~------ 693 (845)
.++|...+.||+|+||.||+|... +++.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367899999999999999999965 6899999998753 2344567899999999999999999999997654
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++||||++ |+|.+++.. .+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 7899999997 578888853 4889999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 176 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 176 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp ----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccccc--------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65321 12334578999999999999999999999999999999999999997654
No 184
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.6e-34 Score=335.36 Aligned_cols=197 Identities=30% Similarity=0.483 Sum_probs=166.1
Q ss_pred cccccCceEEEEEEeC---CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcCCCCC
Q 003140 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (845)
Q Consensus 631 ~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~~~gs 706 (845)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 46789999998643 3456789999999999999999999999976 56899999999999
Q ss_pred HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCcccc
Q 003140 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 786 (845)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~ 786 (845)
|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++........ .
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~----~ 493 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY----Y 493 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce----e
Confidence 99999654 456899999999999999999999998 999999999999999999999999999876432210 1
Q ss_pred ceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 787 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 787 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.......+++.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 11223345689999999999999999999999999999998 999997644
No 185
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.1e-33 Score=309.44 Aligned_cols=201 Identities=28% Similarity=0.453 Sum_probs=170.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999975 589999999865432 335668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 105 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 105 FVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp CCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred cCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 99999998887543 35899999999999999999999998 9999999999999999999999999997654221
Q ss_pred CCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 179 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 229 (331)
T 4aaa_A 179 ------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS 229 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 223345689999999999875 78999999999999999999999997654
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-33 Score=310.93 Aligned_cols=205 Identities=27% Similarity=0.401 Sum_probs=172.7
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEee--------C
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------E 692 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~--------~ 692 (845)
++|.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788999999999999999997 4789999999865332 234578899999999999999999999876 4
Q ss_pred CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCc
Q 003140 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (845)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla 772 (845)
+..++||||++ |+|.+.+.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 46899999997 58888775543 45899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 172 ~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 233 (351)
T 3mi9_A 172 RAFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT 233 (351)
T ss_dssp EECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 876432211 1222345678999999999876 458999999999999999999999997644
No 187
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.3e-34 Score=314.76 Aligned_cols=209 Identities=24% Similarity=0.320 Sum_probs=172.5
Q ss_pred chHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCCh-----------hhHHHHHHHHHHHHhcCCCcee
Q 003140 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----------QGEKEFLTEIQFLSRLHHRNLV 683 (845)
Q Consensus 615 ~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~-----------~~~~~~~~Ei~~l~~l~H~nIv 683 (845)
...++....++|.+.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45677888899999999999999999999988899999998854221 1236899999999999999999
Q ss_pred eEEEEEee-----CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 003140 684 SLVGYCDE-----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (845)
Q Consensus 684 ~l~g~~~~-----~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl 758 (845)
++++++.. ....++||||++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence 99999844 336899999997 7898888753 346899999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 759 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+.++.+||+|||+++..... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD--------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp CTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCCCCEEEEecCcccccccc--------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999754321 12334568899999999876 678999999999999999999999997654
No 188
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-33 Score=301.48 Aligned_cols=199 Identities=25% Similarity=0.416 Sum_probs=172.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +++.||||+++.. ......++.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999976 7999999998753 234467889999999999 999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---------------
Q 003140 699 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--------------- 761 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~--------------- 761 (845)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 256899999999999999999999998 9999999999999844
Q ss_pred ----CcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 762 ----FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 762 ----~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
..+||+|||.++...... ...||..|+|||.+.+. .++.++|||||||++|||++|..|+...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 234 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG 234 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS
T ss_pred cCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch
Confidence 489999999998754221 23489999999999765 6678999999999999999998877543
No 189
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.4e-34 Score=322.66 Aligned_cols=202 Identities=26% Similarity=0.442 Sum_probs=164.7
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--------hhHHHHHHHHHHHHhcCCCceeeEEEEEee
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~ 691 (845)
...++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999965 689999999864321 11235889999999999999999999975
Q ss_pred CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEe
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVAD 768 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~---~~~kl~D 768 (845)
.+..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.+ +.+||+|
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred cCceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 45689999999999999988643 46899999999999999999999998 9999999999999754 4599999
Q ss_pred cCCcccCCCCCCCCccccceeecccCCCCccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 769 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
||+|+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 286 FG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~ 348 (419)
T 3i6u_A 286 FGHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348 (419)
T ss_dssp SSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred cccceecCCC--------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence 9999875421 22334679999999999853 678889999999999999999999997543
No 190
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=311.50 Aligned_cols=212 Identities=29% Similarity=0.448 Sum_probs=174.3
Q ss_pred cchHHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEee
Q 003140 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~ 691 (845)
+++.++....++|.+.+.||+|+||.||+|... +|+.||||++.... ...+++.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344445556788999999999999999999974 78999999987543 3346889999999999 89999999999976
Q ss_pred ------CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEE
Q 003140 692 ------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (845)
Q Consensus 692 ------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~k 765 (845)
.+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence 467899999999999999998765567899999999999999999999998 99999999999999999999
Q ss_pred EEecCCcccCCCCCCCCccccceeecccCCCCccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 766 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+|||++....... .......||..|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 170 l~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp ECCCTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred EeeCcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 99999987653211 1123456899999999987 5678999999999999999999999997543
No 191
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-33 Score=308.93 Aligned_cols=204 Identities=30% Similarity=0.477 Sum_probs=168.5
Q ss_pred cCCCCCccccccCceEEEEEEeCC-----CcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~-----g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 697 (845)
++|...+.||+|+||.||+|.... +..||||+++... .....++.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 466778899999999999998642 2469999987543 3345679999999999999999999999999999999
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 99999999999999764 346899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
... .........+|..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 200 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~ 254 (333)
T 1mqb_A 200 DPE----ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL 254 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccc----cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence 211 0111223346788999999999999999999999999999999 99999654
No 192
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.1e-33 Score=304.12 Aligned_cols=202 Identities=27% Similarity=0.426 Sum_probs=165.9
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4688899999999999999996 47899999998753 2344567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 700 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 700 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||+++|+|.+++.. .....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999965 24556899999999999999999999998 99999999999999999999999999976542
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 189 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 239 (310)
T 2wqm_A 189 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred CC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 21 1123346899999999999999999999999999999999999999754
No 193
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-33 Score=302.25 Aligned_cols=204 Identities=25% Similarity=0.393 Sum_probs=172.6
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC----hhhHHHHHHHHHHHHhcCCCceeeEEEEEe--eCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~----~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~ 695 (845)
.++|.+.+.||+|+||.||++... +++.||||+++... ....+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 68999999987532 234578999999999999999999999984 45678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++| |.+++.......+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999866 888887766678999999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.... .........||..|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 160 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 160 HPFA-----ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp CTTC-----SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred Cccc-----cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 4221 112233456899999999987644 478999999999999999999999754
No 194
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.5e-34 Score=309.09 Aligned_cols=212 Identities=29% Similarity=0.440 Sum_probs=168.2
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEe
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~ 690 (845)
+++....++|.+.+.||+|+||.||+|... .+..||||+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 444556678899999999999999999854 3458999998754 3344567999999999999999999999997
Q ss_pred eCCe-----EEEEEEcCCCCCHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC
Q 003140 691 EEGE-----QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (845)
Q Consensus 691 ~~~~-----~~LV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~ 761 (845)
+.+. .++||||+++|+|.+++... ....+++..++.++.|+++||.|||+.+ |+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 7553 49999999999999998542 3456999999999999999999999998 9999999999999999
Q ss_pred CcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 762 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 9999999999986543221 112234457889999999999999999999999999999999 889997544
No 195
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.3e-33 Score=301.25 Aligned_cols=208 Identities=22% Similarity=0.343 Sum_probs=171.0
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEE-eeCCeEEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVY 699 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~LV~ 699 (845)
..++|...+.||+|+||.||+|.. .+++.||||+...... .+++.+|++++++++|++++..++++ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 5789999998654322 23588899999999888777666655 6777889999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~ 776 (845)
||+ +|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 99999999753 345899999999999999999999998 9999999999999 788999999999998765
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........+........||..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 433221111122345679999999999999999999999999999999999999997643
No 196
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-33 Score=306.52 Aligned_cols=199 Identities=31% Similarity=0.479 Sum_probs=171.6
Q ss_pred CCCCccccccCceEEEEEEeC-----CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CeEEE
Q 003140 626 FNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (845)
Q Consensus 626 f~~~~~LG~G~fG~Vy~~~~~-----~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~L 697 (845)
|...+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999988642 68899999997643 34467799999999999999999999999874 67899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.+++... .+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999654 3899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
... .........+|..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 187 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 187 GHE----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp TCS----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccc----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 221 11223345678889999999998999999999999999999999999964
No 197
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.9e-33 Score=299.60 Aligned_cols=207 Identities=22% Similarity=0.345 Sum_probs=173.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEE-eeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~LV~E 700 (845)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .+++.+|++++++++|++++..++++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788999999999999999996 5799999999875432 24688999999999988776666655 66778899999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~~ 777 (845)
|+ +++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||+ +.++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 99999999753 346899999999999999999999998 9999999999999 5889999999999987654
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......+........||..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence 32211111122345679999999999999999999999999999999999999997643
No 198
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-34 Score=311.81 Aligned_cols=203 Identities=26% Similarity=0.411 Sum_probs=168.5
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhh-----HHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-----EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~-----~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
..++|...+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3578999999999999999999975 68999999987532221 24688999999999999999999999999999
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++ +|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 88 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999975 899988654 346888899999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..||....
T Consensus 163 ~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~ 217 (346)
T 1ua2_A 163 GSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217 (346)
T ss_dssp TSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence 4321 223345689999999998754 58999999999999999999999987544
No 199
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4e-33 Score=298.83 Aligned_cols=200 Identities=30% Similarity=0.505 Sum_probs=170.8
Q ss_pred CCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCeEEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQML 697 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~L 697 (845)
.|...+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4667788999999999999975 6889999998643 33445779999999999999999999999865 356899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEecCCcccCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAP 776 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~kl~DFGla~~~~ 776 (845)
||||+++|+|.+++... ..+++..++.++.|+++||+|||+.+ ++|+||||||+|||++ +++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 99999999999999764 35889999999999999999999875 4599999999999998 78999999999997543
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
.. ......||+.|+|||.+. +.++.++|||||||++|||++|+.||....+
T Consensus 184 ~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 234 (290)
T 1t4h_A 184 AS---------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN 234 (290)
T ss_dssp TT---------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred cc---------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc
Confidence 21 223456899999999876 4689999999999999999999999976443
No 200
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.3e-33 Score=308.18 Aligned_cols=202 Identities=33% Similarity=0.525 Sum_probs=171.0
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcE--EEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTV--VAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~--vAVK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 698 (845)
++|...+.||+|+||.||+|... ++.. ||||.++.. .....+++.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67888999999999999999964 5664 499988753 233456789999999999 899999999999999999999
Q ss_pred EEcCCCCCHHHHHhccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcE
Q 003140 699 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~ 764 (845)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 346899999999999999999999998 9999999999999999999
Q ss_pred EEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 765 kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
||+|||+++.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 182 kL~Dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~ 246 (327)
T 1fvr_A 182 KIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246 (327)
T ss_dssp EECCTTCEESSCE--------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred EEcccCcCccccc--------cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc
Confidence 9999999974321 111233456889999999998889999999999999999998 999997543
No 201
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.2e-33 Score=326.42 Aligned_cols=324 Identities=20% Similarity=0.266 Sum_probs=211.0
Q ss_pred CCCcceEecCCC-----CC-CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhcc
Q 003140 65 SNWTGVLCFNTT-----MD-DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLN 138 (845)
Q Consensus 65 ~~w~Gv~C~~~~-----~~-~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 138 (845)
|.|.|+ |.... .+ ....+++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 358887 74321 11 223578889999998888888888888888888888888888777888888888888888
Q ss_pred CCCCCCCCCCccCCCCccceeecccccccC-CCCccccCccCCCEEEccCCCCCCCCc-cccCCCCCcceeecccccccc
Q 003140 139 GNELTGSLPEELGYLPKLDRIQIDQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTG 216 (845)
Q Consensus 139 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 216 (845)
+|++++..|..|+++++|++|+|++|++++ ..|..+.++++|++|++++|.+.+.+| ..+..+++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 888887766678888888888888888876 356677777778888777777443443 456666666666666666555
Q ss_pred CCCcccCC------------------------CCCCcEEEccCCcCCCCC------------------------------
Q 003140 217 YLPPELSE------------------------LPKLLILQLDNNNFEGTT------------------------------ 242 (845)
Q Consensus 217 ~~p~~l~~------------------------l~~L~~L~Ls~N~l~~~~------------------------------ 242 (845)
..|..+.. +++|++|++++|++++..
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH
T ss_pred cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH
Confidence 44443332 233333333333333210
Q ss_pred --------------------------------------------------------------------------------
Q 003140 243 -------------------------------------------------------------------------------- 242 (845)
Q Consensus 243 -------------------------------------------------------------------------------- 242 (845)
T Consensus 243 l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l 322 (549)
T 2z81_A 243 LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKV 322 (549)
T ss_dssp HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCC
T ss_pred HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcc
Confidence
Q ss_pred --Ccccc-ccCCCccEEEcccCCCC---------------------------CCCC---CCCCCCCccEEEcccccCCcC
Q 003140 243 --IPASY-SNMSKLLKLSLRNCSLQ---------------------------GPMP---DLSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 243 --~p~~~-~~l~~L~~L~Ls~N~l~---------------------------~~~~---~l~~l~~L~~L~Ls~N~l~~~ 289 (845)
+|..+ .++++|+.|+|++|+++ +.++ .+..+++|++|++++|+++ .
T Consensus 323 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 323 FLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp CCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred ccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 01011 12333444444444433 2211 1445566777777777776 4
Q ss_pred CCCCCC-ccccCEEEccCCcCCCCccc-----------------ccCCCCCCCeEecccccCcccCChhhhhhccCCCCc
Q 003140 290 IPPGRL-SLNITTIKLSNNKLTGTIPS-----------------NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 351 (845)
Q Consensus 290 ip~~~~-~~~L~~L~Ls~N~l~~~~p~-----------------~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~ 351 (845)
+|..+. ..+|+.|+|++|+++..... .+..+++|++|+|++|+|+ .+|.. .. .+.
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~-~~-----l~~ 474 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDA-SL-----FPV 474 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCG-GG-----CTT
T ss_pred CChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCc-cc-----Ccc
Confidence 554332 22455555555554421110 1247889999999999998 67763 22 356
Q ss_pred ceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCC-ccccCCC
Q 003140 352 TFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNA-EQFCGSH 397 (845)
Q Consensus 352 l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~~c~~~~-~~~~~~~ 397 (845)
|+.|+|++|+|++++.. + .++.+..+++++|||.|+|+. .++..|.
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l 523 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 523 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHH
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHH
Confidence 77999999999998876 3 589999999999999999984 3443444
No 202
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-34 Score=316.08 Aligned_cols=204 Identities=34% Similarity=0.535 Sum_probs=160.8
Q ss_pred CCCCCccccccCceEEEEEEeC--CC--cEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEee-CCeEEEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILP--DG--TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLV 698 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~--~g--~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~-~~~~~LV 698 (845)
.|...+.||+|+||.||+|.+. ++ ..||||.++... ....++|.+|++++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999863 22 468999987533 3456789999999999999999999999754 5678999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.++++.. ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999754 345889999999999999999999998 999999999999999999999999999865432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
... .........+|+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 246 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 246 EFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 211 1112234457889999999999999999999999999999999 66677543
No 203
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.2e-34 Score=301.84 Aligned_cols=207 Identities=27% Similarity=0.435 Sum_probs=173.8
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCeEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQML 697 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~--~~~~~L 697 (845)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+ .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888999999999999999975 68999999987543 3445679999999999999999999998754 578999
Q ss_pred EEEcCCCCCHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 698 VYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999763 3456899999999999999999999876 2449999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
...... .......||..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 165 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 220 (279)
T 2w5a_A 165 ILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220 (279)
T ss_dssp HC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence 653211 11233568999999999999999999999999999999999999997643
No 204
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=312.46 Aligned_cols=206 Identities=29% Similarity=0.469 Sum_probs=164.1
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHH--HHhcCCCceeeEEEEEee-----CCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF--LSRLHHRNLVSLVGYCDE-----EGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~--l~~l~H~nIv~l~g~~~~-----~~~~ 695 (845)
.++|.+.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46788899999999999999987 68999999986532 3344445444 555899999999986532 2356
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CCCCeEecCCCCCCEEEcCCCcEEE
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE---------ADPPVFHRDIKASNILLDHKFTAKV 766 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------~~~~iiHrDLk~~NILl~~~~~~kl 766 (845)
++||||+++|+|.+++... ..++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence 8999999999999999654 358999999999999999999998 6 999999999999999999999
Q ss_pred EecCCcccCCCCCCCCc-cccceeecccCCCCccchhhhcC-------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCc
Q 003140 767 ADFGLSRLAPVPDIEGI-VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~~ 838 (845)
+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..+...
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643221100 01122334579999999999976 45667899999999999999999988765543
No 205
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.4e-34 Score=310.77 Aligned_cols=233 Identities=27% Similarity=0.498 Sum_probs=216.5
Q ss_pred CCccEEEecCCCCCC--CCcccccccccchhhhccC-CCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCE
Q 003140 106 SYLTILDFMWNKISG--SIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (845)
Q Consensus 106 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (845)
.++++|+|++|++++ .+|..|.++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCC-CCcEEEccCCcCCCCCCccccccCCCccEEEcccC
Q 003140 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (845)
|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..++ +|++|+|++|++++ .+|..+..++ |+.|+|++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG-KIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE-ECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec-cCChHHhCCc-ccEEECcCC
Confidence 99999999999999999999999999999999999999999998 99999999999997 6899999987 999999999
Q ss_pred CCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChh
Q 003140 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (845)
Q Consensus 262 ~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (845)
++++..+. +..+++|+.|++++|.+++.+|......+|+.|+|++|+|++.+|..|..+++|++|+|++|+++|.+|..
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 99987664 88999999999999999987777555568999999999999888999999999999999999998888864
No 206
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-33 Score=306.38 Aligned_cols=203 Identities=29% Similarity=0.437 Sum_probs=173.5
Q ss_pred HhcCCCCCccccccCceEEEEEEe--CCCcEEEEEEccCCCh--hhHHHHHHHHHHHHhc---CCCceeeEEEEEe----
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCD---- 690 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~--~~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l---~H~nIv~l~g~~~---- 690 (845)
..++|.+.+.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 4688999998864321 1223566777777766 8999999999987
Q ss_pred -eCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEec
Q 003140 691 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (845)
Q Consensus 691 -~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DF 769 (845)
.....++||||++ |+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999997 79999998876667999999999999999999999998 999999999999999999999999
Q ss_pred CCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 165 g~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (326)
T 1blx_A 165 GLARIYSF--------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223 (326)
T ss_dssp CSCCCCCG--------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccC--------CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99976531 112334568999999999999999999999999999999999999997654
No 207
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.7e-34 Score=303.43 Aligned_cols=198 Identities=32% Similarity=0.515 Sum_probs=167.1
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-CeEEEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-GEQMLVYE 700 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~-~~~~LV~E 700 (845)
..++|...+.||+|+||.||+|.. +|+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 346788899999999999999987 48999999987543 456799999999999999999999997554 47899999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~ 780 (845)
|+++|+|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997654445889999999999999999999998 999999999999999999999999998754321
Q ss_pred CCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred --------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 122357889999999999999999999999999999998 99999754
No 208
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.9e-34 Score=315.18 Aligned_cols=197 Identities=26% Similarity=0.432 Sum_probs=156.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------C
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~------~ 693 (845)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999996 46899999998753 334457889999999999999999999998654 5
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++|+||+ +++|.++++. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 7899998864 46899999999999999999999998 9999999999999999999999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... ......||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.+
T Consensus 181 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 181 HTAD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp --------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 6431 1234578999999999877 678999999999999999999999997654
No 209
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=308.94 Aligned_cols=204 Identities=28% Similarity=0.471 Sum_probs=167.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcE----EEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTV----VAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~----vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
.++|...+.||+|+||.||+|.+. +++. ||+|.+... .....+++.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367888999999999999999964 4443 577877543 3445678999999999999999999999998754 78
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
+|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 46899999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
... .........+|..|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 169 ~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~ 224 (327)
T 3lzb_A 169 AEE-----KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred Ccc-----ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 322 1122233456789999999999999999999999999999999 999997543
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-33 Score=324.15 Aligned_cols=200 Identities=28% Similarity=0.449 Sum_probs=170.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|...+.||+|+||.||+|... ++..||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356888999999999999999975 68999999987543 233567899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCCcccCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 776 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~---~~~kl~DFGla~~~~ 776 (845)
||+++|+|.+++... ..+++..+..++.||++||+|||+.+ |+||||||+|||++.. +.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 999999999988664 35889999999999999999999998 9999999999999764 569999999998754
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.. .......||+.|+|||++. ..++.++||||+||++|||++|+.||....
T Consensus 191 ~~--------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 241 (494)
T 3lij_A 191 NQ--------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT 241 (494)
T ss_dssp TT--------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC--------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 1233457999999999886 569999999999999999999999997543
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4e-33 Score=322.73 Aligned_cols=200 Identities=30% Similarity=0.449 Sum_probs=172.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh-------------hhHHHHHHHHHHHHhcCCCceeeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-------------~~~~~~~~Ei~~l~~l~H~nIv~l~g~ 688 (845)
.++|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 468999999999999999999975 688999999875321 234678999999999999999999999
Q ss_pred EeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCC---cEE
Q 003140 689 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAK 765 (845)
Q Consensus 689 ~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~---~~k 765 (845)
+.+.+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEE
Confidence 99999999999999999999998664 35899999999999999999999998 99999999999998776 699
Q ss_pred EEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 766 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+|||+++..... .......||+.|+|||++. ..++.++||||+||++|||++|+.||....
T Consensus 190 l~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 251 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--------YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN 251 (504)
T ss_dssp ECCCTTCEECCTT--------SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEECCCCEEcCCC--------CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999876422 1233456999999999986 568999999999999999999999997643
No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.3e-33 Score=305.91 Aligned_cols=199 Identities=24% Similarity=0.381 Sum_probs=175.4
Q ss_pred hcCCCCCccccccCceEEEEEEe--CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCC------ceeeEEEEEeeCCe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR------NLVSLVGYCDEEGE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~--~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~------nIv~l~g~~~~~~~ 694 (845)
.++|.+.+.||+|+||.||+|.. .+++.||||+++.. ....+.+.+|+++++.++|+ +++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46889999999999999999986 36899999998753 34456788999999998765 49999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC--------------
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 760 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~-------------- 760 (845)
.++||||+ +++|.+++......++++..+..++.|+++||+|||+++ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 899999998876667999999999999999999999998 999999999999987
Q ss_pred -----CCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 761 -----KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 761 -----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999864321 23456899999999999999999999999999999999999999765
Q ss_pred C
Q 003140 836 K 836 (845)
Q Consensus 836 ~ 836 (845)
+
T Consensus 238 ~ 238 (339)
T 1z57_A 238 D 238 (339)
T ss_dssp C
T ss_pred C
Confidence 4
No 213
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=5.8e-33 Score=298.67 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=175.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---------hhhHHHHHHHHHHHHhcC-CCceeeEEEEEee
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---------LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 691 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---------~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~ 691 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++. ||||+++++++.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468889999999999999999975 68999999986532 122456889999999995 9999999999999
Q ss_pred CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCC
Q 003140 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (845)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGl 771 (845)
.+..++||||+++|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999764 35899999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
++...... ......||..|+|||++. ...++.++||||||+++|||++|+.||....
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 233 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence 98654221 123456899999999985 4568899999999999999999999997543
No 214
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.1e-33 Score=298.61 Aligned_cols=200 Identities=28% Similarity=0.416 Sum_probs=168.3
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367888999999999999999976 79999999986532 22356789999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++++|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 5889999999999999999999998 999999999999999999999999999865422
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 165 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 165 E--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp --------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1234468899999999987765 68999999999999999999999754
No 215
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.1e-33 Score=317.17 Aligned_cols=197 Identities=26% Similarity=0.382 Sum_probs=164.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC----C--eEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----G--EQM 696 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~----~--~~~ 696 (845)
.+|...+.||+|+||.||+|.+. +|+.||||++..... .+.+|++++++++||||+++++++... + ..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 45778899999999999999975 689999999865322 234799999999999999999988542 2 367
Q ss_pred EEEEcCCCCCHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-CcEEEEecCCcc
Q 003140 697 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSR 773 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~-~~~kl~DFGla~ 773 (845)
+||||+++ ++.+.+.. .....+++..++.++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999974 77776653 34567999999999999999999999998 9999999999999965 678999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
...... ......||..|+|||++.+. .++.++|||||||++|||++|+.||.+..
T Consensus 206 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~ 261 (420)
T 1j1b_A 206 QLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261 (420)
T ss_dssp ECCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred hcccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 654221 12345689999999998764 79999999999999999999999997654
No 216
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-33 Score=315.09 Aligned_cols=199 Identities=22% Similarity=0.271 Sum_probs=172.1
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC--------CCceeeEEEEEe---
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCD--- 690 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~--------H~nIv~l~g~~~--- 690 (845)
.++|.+.+.||+|+||.||+|... +++.||||+++.. ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999864 6899999998753 344567899999999985 788999999987
Q ss_pred -eCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCC------
Q 003140 691 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKF------ 762 (845)
Q Consensus 691 -~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~------ 762 (845)
.....++||||+ +|+|.+++.......+++..++.++.||++||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 456789999999 67777777666556799999999999999999999998 7 99999999999999775
Q ss_pred -------------------------------------------cEEEEecCCcccCCCCCCCCccccceeecccCCCCcc
Q 003140 763 -------------------------------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 799 (845)
Q Consensus 763 -------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ 799 (845)
.+||+|||+++..... .....||..|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~ 260 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYR 260 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCccc
Confidence 7999999999865321 23346899999
Q ss_pred chhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 800 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 800 aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|||++.+..++.++|||||||++|||++|+.||....
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 9999999999999999999999999999999997543
No 217
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.7e-33 Score=309.06 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=171.4
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCC-hhhHHHHHHHHHH-HHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~-~~~~~~~~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
..++|...+.||+|+||.||+|.. .+|+.||||+++... ....+++..|..+ ++.++||||+++++++.+.+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 446788889999999999999996 479999999987543 2334566666665 7778999999999999999999999
Q ss_pred EEcCCCCCHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 699 YEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
|||++ |+|.+++... ....+++..++.++.||++||+|||++ + |+||||||+|||++.++.+||+|||+++..
T Consensus 129 ~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99997 5999988652 456799999999999999999999986 7 999999999999999999999999999765
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhc----CCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFL----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.. ........||..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 205 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~ 260 (340)
T 3an0_A 205 VD--------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 260 (340)
T ss_dssp SC--------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred cc--------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 31 11223357999999999974 347899999999999999999999999764
No 218
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-33 Score=325.40 Aligned_cols=200 Identities=28% Similarity=0.465 Sum_probs=175.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467888999999999999999975 78999999986432 33467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLA 775 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~ 775 (845)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999998654 45899999999999999999999998 9999999999999 56789999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||....
T Consensus 180 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 180 EAS--------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp CCC--------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccc--------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 422 12234569999999999866 69999999999999999999999997643
No 219
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-33 Score=308.88 Aligned_cols=207 Identities=29% Similarity=0.458 Sum_probs=172.7
Q ss_pred HhcCCCCCccccccCceEEEEEEe------CCCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~------~~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 694 (845)
..++|.+.+.||+|+||.||+|.+ .+++.||||++... ......++.+|+.++++++||||+++++++.+.+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 346888999999999999999984 25778999998754 34456789999999999999999999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEE
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKV 766 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~~kl 766 (845)
.++||||+++|+|.+++..... ..+++..++.++.|+++||.|||+.+ |+||||||+|||++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986532 45899999999999999999999998 999999999999984 456999
Q ss_pred EecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 767 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+|||+++...... .........||+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 185 ~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 250 (327)
T 2yfx_A 185 GDFGMARDIYRAS-----YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250 (327)
T ss_dssp CCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred Ccccccccccccc-----ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence 9999987543221 1112234567899999999999999999999999999999998 999997543
No 220
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.1e-34 Score=307.46 Aligned_cols=213 Identities=29% Similarity=0.402 Sum_probs=160.2
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEE
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 696 (845)
+....++|.+.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3455678999999999999999999964 68999999886533 334567899999999999999999999999999999
Q ss_pred EEEEcCCCCCHHHHHhcc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003140 697 LVYEFMSNGTLRDQLSAK------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFG 770 (845)
+||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998641 3456899999999999999999999998 9999999999999999999999999
Q ss_pred CcccCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+++....... ...........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 167 ~~~~~~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 231 (303)
T 2vwi_A 167 VSAFLATGGD--ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231 (303)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred chheeccCCC--ccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCc
Confidence 9976543210 011122334578999999999875 568999999999999999999999997643
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=305.21 Aligned_cols=210 Identities=26% Similarity=0.380 Sum_probs=173.9
Q ss_pred HHhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCeE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 695 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~ 695 (845)
+..++|...+.||+|+||.||++.. .+|+.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 3457899999999999999999997 5799999999877666667889999999999999999999999863 3478
Q ss_pred EEEEEcCCCCCHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 696 MLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
++||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 9999999999999999763 3467999999999999999999999998 9999999999999999999999999987
Q ss_pred cCCCCCCCCc--cccceeecccCCCCccchhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 774 LAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 774 ~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
.......... ..........||+.|+|||.+.... ++.++|||||||++|||++|+.||.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 247 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence 6431100000 0000112345799999999987554 6889999999999999999999995
No 222
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-33 Score=304.41 Aligned_cols=200 Identities=28% Similarity=0.415 Sum_probs=163.0
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhc--CCCceeeEEEEEeeC----
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE---- 692 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l--~H~nIv~l~g~~~~~---- 692 (845)
.....++|.+.+.||+|+||.||+|... |+.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3345578999999999999999999985 899999998643 234555666666554 899999999999887
Q ss_pred CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeEecCCCCCCEEEcCCCcEEEE
Q 003140 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-----DPPVFHRDIKASNILLDHKFTAKVA 767 (845)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~iiHrDLk~~NILl~~~~~~kl~ 767 (845)
...++||||+++|+|.++++.. .+++..++.++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999653 5899999999999999999999881 1229999999999999999999999
Q ss_pred ecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCch------hhHHHHHHHHHHHHhC
Q 003140 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK------SDVYSLGVVFLELLTG 828 (845)
Q Consensus 768 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwS~Gvvl~elltG 828 (845)
|||+++........ .........||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 185 Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 185 DLGLAVKFISDTNE---VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCceeecccccc---ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99999765432211 0111234579999999999987766654 9999999999999999
No 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-33 Score=301.80 Aligned_cols=205 Identities=29% Similarity=0.398 Sum_probs=171.3
Q ss_pred CCCCCccccccCceEEEEEEeC-C---CcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE-EEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ-MLV 698 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~-~---g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~-~LV 698 (845)
.|...+.||+|+||.||+|.+. + +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3455688999999999999853 2 3379999987543 34457899999999999999999999999776655 999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+.+|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999763 356899999999999999999999998 999999999999999999999999999865432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... .........+|..|+|||.+.+..++.++|||||||++|||++|..|+....
T Consensus 178 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~ 232 (298)
T 3pls_A 178 EYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI 232 (298)
T ss_dssp GGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred ccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC
Confidence 111 1122334567899999999999999999999999999999999777765443
No 224
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=303.27 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=167.1
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEe------------
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD------------ 690 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~------------ 690 (845)
++|...+.||+|+||.||+|... +|+.||||++........+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 67888999999999999999976 58999999998776667788999999999999999999999873
Q ss_pred --eCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEE
Q 003140 691 --EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVA 767 (845)
Q Consensus 691 --~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~kl~ 767 (845)
+.+..++||||++ |+|.+++.. .++++..++.++.|+++||+|||+.+ |+||||||+|||++ +++.+||+
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEEC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 799999954 45889999999999999999999998 99999999999997 56799999
Q ss_pred ecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 768 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|||+++....... .........+|..|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 164 Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 164 DFGLARIMDPHYS----HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp CCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCccccccCCCcc----cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999987542210 1112234467899999998865 678999999999999999999999997654
No 225
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-33 Score=302.40 Aligned_cols=203 Identities=29% Similarity=0.449 Sum_probs=172.6
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
...++|.+.+.||+|+||.||+|... +|+.||||++.... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34578999999999999999999975 58999999987543 3457899999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++|+|.+++... ...+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp ECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred ecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 999999999999643 346899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 180 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 229 (314)
T 3com_A 180 -------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229 (314)
T ss_dssp -------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred -------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 11234568999999999999999999999999999999999999997543
No 226
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.1e-33 Score=300.79 Aligned_cols=202 Identities=25% Similarity=0.359 Sum_probs=160.3
Q ss_pred HhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCC-hhhHH-HHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEK-EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~-~~~~~-~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
..++|+..+.||+|+||.||+|.. .+|+.||||+++... ..... .+.++...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 346788999999999999999997 478999999987542 22233 344555568888999999999999999999999
Q ss_pred EEcCCCCCHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 699 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
|||++ |+|.+++.. .....+++..++.++.|+++||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 699888765 2456799999999999999999999997 8 999999999999999999999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhh----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (290)
T 3fme_A 161 VDD--------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216 (290)
T ss_dssp -----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred ccc--------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc
Confidence 422 112334689999999996 5667899999999999999999999999753
No 227
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.2e-33 Score=303.10 Aligned_cols=205 Identities=29% Similarity=0.408 Sum_probs=170.9
Q ss_pred HhcCCCCCc-cccccCceEEEEEEe---CCCcEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 622 ATNNFNSST-QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 622 ~~~~f~~~~-~LG~G~fG~Vy~~~~---~~g~~vAVK~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
..++|.+.+ .||+|+||.||+|.+ .+++.||||+++.... ...+++.+|++++++++||||+++++++ +.+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345677777 999999999999964 2478899999875432 2356899999999999999999999999 56778
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 9999999999999999764 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
..... .........++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 168 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 225 (291)
T 1xbb_A 168 RADEN----YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225 (291)
T ss_dssp CTTCS----EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ccCCC----cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 43221 0111223446789999999998889999999999999999999 999997543
No 228
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.9e-33 Score=302.49 Aligned_cols=204 Identities=34% Similarity=0.499 Sum_probs=168.4
Q ss_pred cCCCCCccccccCceEEEEEEeCC----CcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEe-eCCeEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~----g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~-~~~~~~L 697 (845)
.+|...+.||+|+||.||+|...+ +..||||.+.... ....+++.+|++++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457778999999999999998642 2368999987543 344578999999999999999999999964 4567899
Q ss_pred EEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCC
Q 003140 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~ 777 (845)
||||+++|+|.++++.. ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999753 346899999999999999999999998 99999999999999999999999999986643
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCC-CCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ-PISH 834 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~-Pf~~ 834 (845)
.... .........+|+.|+|||.+.+..++.++||||||+++|||++|.. ||..
T Consensus 181 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 181 KEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp GGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 2211 1222344567889999999999999999999999999999999554 5543
No 229
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.4e-34 Score=313.34 Aligned_cols=202 Identities=23% Similarity=0.394 Sum_probs=177.2
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhh-----------------HHHHHHHHHHHHhcCCCceeeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-----------------EKEFLTEIQFLSRLHHRNLVSL 685 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~-----------------~~~~~~Ei~~l~~l~H~nIv~l 685 (845)
.++|.+.+.||+|+||.||+|.. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36788999999999999999999 89999999986432211 1789999999999999999999
Q ss_pred EEEEeeCCeEEEEEEcCCCCCHHHH------HhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEecCCCCCCEEE
Q 003140 686 VGYCDEEGEQMLVYEFMSNGTLRDQ------LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILL 758 (845)
Q Consensus 686 ~g~~~~~~~~~LV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~iiHrDLk~~NILl 758 (845)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|+++||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998 655446789999999999999999999998 88 9999999999999
Q ss_pred cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCc-hhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTD-KSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 759 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+.++.+||+|||+++..... ......||..|+|||.+.+. .++. ++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999865321 23445689999999999877 6666 9999999999999999999997654
Q ss_pred C
Q 003140 837 N 837 (845)
Q Consensus 837 ~ 837 (845)
.
T Consensus 257 ~ 257 (348)
T 2pml_X 257 S 257 (348)
T ss_dssp C
T ss_pred c
Confidence 3
No 230
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-33 Score=327.69 Aligned_cols=147 Identities=17% Similarity=0.249 Sum_probs=115.3
Q ss_pred cccCCCccEEEcccCCCCCCCC--CCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCC-CCcccccCCCCC
Q 003140 247 YSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLT-GTIPSNFSGLPR 322 (845)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~-~~~p~~~~~l~~ 322 (845)
+..+++|+.|++++|++++.++ .+..+++|++|++++|.+++..|..+. ..+|+.|+|++|.++ +.+|..+..+++
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 4555666666666666666544 367778888888888888776666544 347888889888887 578888889999
Q ss_pred CCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCCcccc-CCCC
Q 003140 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFC-GSHS 398 (845)
Q Consensus 323 L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~~c~~~~~~~~-~~~~ 398 (845)
|++|+|++|++++..|..+..+. +|+.|++++|+|++++.. + .++.++.+++++|||.|+|+..++- .|..
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~-----~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~ 545 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLS-----SLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 545 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHH
T ss_pred CCEEECCCCccccCChhhhhccc-----CCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHH
Confidence 99999999999988888876554 456999999999998875 3 5899999999999999999988776 6653
No 231
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=307.77 Aligned_cols=214 Identities=25% Similarity=0.424 Sum_probs=161.6
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEe--------
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCD-------- 690 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~-------- 690 (845)
....+|.+.+.||+|+||.||+|... +++.||||++........+.+.+|+++++++. ||||+++++++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 34467888999999999999999964 78999999987766666778999999999996 999999999984
Q ss_pred eCCeEEEEEEcCCCCCHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEec
Q 003140 691 EEGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (845)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DF 769 (845)
.....++||||++ |+|.+++.. .....+++..++.++.|+++||+|||+.+ ++|+||||||+|||++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 3345899999995 899998865 33456999999999999999999999875 45999999999999999999999999
Q ss_pred CCcccCCCCCCCCccc-----cceeecccCCCCccchhhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVP-----AHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+++............ ........||+.|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 257 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence 9998764322110000 0111244689999999998 56678999999999999999999999997543
No 232
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.1e-33 Score=323.74 Aligned_cols=200 Identities=28% Similarity=0.432 Sum_probs=173.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999975 78999999986422 234578999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc---CCCcEEEEecCCcccCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLAP 776 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~---~~~~~kl~DFGla~~~~ 776 (845)
||+++|+|.+++... ..+++..+..++.|+++||.|||+.+ |+||||||+|||++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 999999999988664 35899999999999999999999998 99999999999995 45689999999998654
Q ss_pred CCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.. .......||+.|+|||++.+ .++.++||||+||++|||++|+.||....
T Consensus 176 ~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 226 (486)
T 3mwu_A 176 QN--------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (486)
T ss_dssp CC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC--------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 22 12334569999999999875 59999999999999999999999997543
No 233
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-33 Score=303.94 Aligned_cols=203 Identities=24% Similarity=0.403 Sum_probs=171.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEc
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.++|++.+.||+|+||.||+|... +++.||+|++........+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467889999999999999999976 5899999998876666678899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCC
Q 003140 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (845)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~ 781 (845)
+++|+|.+++.... ..+++..+..++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 169 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK---- 169 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH----
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccc----
Confidence 99999999987643 45899999999999999999999998 99999999999999999999999998753210
Q ss_pred CccccceeecccCCCCccchhhh-----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 782 GIVPAHVSTVVKGTPGYLDPEYF-----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.........||..|+|||++ ....++.++||||||+++|||++|+.||...+
T Consensus 170 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 170 ---TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp ---HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ---cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 01112334689999999998 36778999999999999999999999997543
No 234
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-33 Score=314.14 Aligned_cols=198 Identities=25% Similarity=0.385 Sum_probs=164.0
Q ss_pred cCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe------EEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------QML 697 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~------~~L 697 (845)
.+|...+.||+|+||.||+|...++..||+|++..... ...+|+++++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888999999999999999987777799998765322 22369999999999999999999855433 789
Q ss_pred EEEcCCCCCHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEecCCcccC
Q 003140 698 VYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLA 775 (845)
Q Consensus 698 V~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~kl~DFGla~~~ 775 (845)
||||++++.+....+. .....+++..+..++.|+++||+|||+.+ |+||||||+|||++ .++.+||+|||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 9999986544333321 23457899999999999999999999998 99999999999999 7999999999999875
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..
T Consensus 193 ~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 193 IAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp CTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4221 12345689999999998764 58999999999999999999999997654
No 235
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9e-34 Score=315.19 Aligned_cols=197 Identities=12% Similarity=0.037 Sum_probs=153.5
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhc--CCCceeeEE-------EEEe
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL--HHRNLVSLV-------GYCD 690 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l--~H~nIv~l~-------g~~~ 690 (845)
.+|...+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999965 789999999986543 3345677885555444 699988755 4444
Q ss_pred eC-----------------CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHH------HHHHHHHHHHHHHHHhCCCCCeE
Q 003140 691 EE-----------------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR------LSIALGSSRGILYLHTEADPPVF 747 (845)
Q Consensus 691 ~~-----------------~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ii 747 (845)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.||++||+|||+++ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 33 33799999998 999999976422 2355555 788899999999999999 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC--CCCCchhhHHHHHHHHHHH
Q 003140 748 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLEL 825 (845)
Q Consensus 748 HrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~el 825 (845)
||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT----------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC----------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC----------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 999999999999999999999999986531 1224457799999999987 6799999999999999999
Q ss_pred HhCCCCCCCC
Q 003140 826 LTGMQPISHG 835 (845)
Q Consensus 826 ltG~~Pf~~~ 835 (845)
++|+.||...
T Consensus 287 ltg~~Pf~~~ 296 (371)
T 3q60_A 287 WCLFLPFGLV 296 (371)
T ss_dssp HHSSCSTTBC
T ss_pred HhCCCCCCCc
Confidence 9999999765
No 236
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.8e-33 Score=304.88 Aligned_cols=201 Identities=28% Similarity=0.448 Sum_probs=168.9
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh--------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~ 692 (845)
..++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467899999999999999999975 689999999865321 1234588999999999999999999998765
Q ss_pred CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEec
Q 003140 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADF 769 (845)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~---~kl~DF 769 (845)
+ .++||||+++|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 4 89999999999999998643 46899999999999999999999998 999999999999987654 999999
Q ss_pred CCcccCCCCCCCCccccceeecccCCCCccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+++..... .......||..|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 162 g~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 162 GHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp TTCEECCCC--------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred ccceecccc--------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 999865321 1123456899999999974 5678999999999999999999999997543
No 237
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=316.09 Aligned_cols=203 Identities=29% Similarity=0.408 Sum_probs=155.9
Q ss_pred CCCC-CccccccCceEEEEEEeC---CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCeEEEE
Q 003140 625 NFNS-STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLV 698 (845)
Q Consensus 625 ~f~~-~~~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~--~~~~~LV 698 (845)
.|.+ .++||+|+||.||+|... +++.||||++..... .+.+.+|++++++++||||+++++++.. ....++|
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3554 458999999999999965 578999999975432 3468899999999999999999999954 6789999
Q ss_pred EEcCCCCCHHHHHhcc-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----cCCCcEEEE
Q 003140 699 YEFMSNGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVA 767 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl----~~~~~~kl~ 767 (845)
|||++ |+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99996 6888887532 2235899999999999999999999999 9999999999999 678899999
Q ss_pred ecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 768 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
|||+|+....... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 175 Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 175 DMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp CTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred ECCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 9999987642210 11223446789999999999874 589999999999999999999999976544
No 238
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.6e-33 Score=335.87 Aligned_cols=290 Identities=19% Similarity=0.283 Sum_probs=222.7
Q ss_pred cceEeEEEecCCCCcc-----------------cCCCCcc--CCCCccEEEecCCCCCCCCcccccccccchhhhccCCC
Q 003140 81 YLHLRELQLLNLNLSG-----------------NLSPEIG--RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE 141 (845)
Q Consensus 81 ~~~v~~L~L~~~~l~~-----------------~~~~~l~--~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (845)
..+++.|+|++|.|++ .+|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4578999999999998 4888888 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCCccCCCC-------ccceeecccccccCCCCc--cccCccCCCEEEccCCCCCCCCccccCCCCCcceeecc
Q 003140 142 -LTG-SLPEELGYLP-------KLDRIQIDQNYISGSLPK--SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (845)
Q Consensus 142 -l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (845)
++| .+|..++.++ +|++|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+| .++.+++|+.|+|+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 887 7887666555 8999999999988 7887 8888889999999999888 777 88888888888888
Q ss_pred ccccccCCCcccCCCCC-CcEEEccCCcCCCCCCccccccCCC--ccEEEcccCCCCCCCCCC-----------------
Q 003140 211 NNNLTGYLPPELSELPK-LLILQLDNNNFEGTTIPASYSNMSK--LLKLSLRNCSLQGPMPDL----------------- 270 (845)
Q Consensus 211 ~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~l----------------- 270 (845)
+|+++ .+|..+..+++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++++.++.+
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~--~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK--YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC--SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC--cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 88888 78888888888 888888888887 46666655543 666666666666544321
Q ss_pred -------------CCCCCccEEEcccccCCcCCCCCCCcc---------ccCEEEccCCcCCCCcccccC--CCCCCCeE
Q 003140 271 -------------SRIPNLGYLDLSSNQLNGSIPPGRLSL---------NITTIKLSNNKLTGTIPSNFS--GLPRLQRL 326 (845)
Q Consensus 271 -------------~~l~~L~~L~Ls~N~l~~~ip~~~~~~---------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L 326 (845)
..+++|+.|+|++|+|+ .+|...+.. +|+.|+|++|+|+ .+|..+. .+++|+.|
T Consensus 681 s~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 681 SYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758 (876)
T ss_dssp CSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEE
T ss_pred cCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEE
Confidence 24567777777777777 566544321 6888888888888 6677776 78888888
Q ss_pred ecccccCcccCChhhhhhccCCCCcceEEEccC------CCCC-CCCCCC-CCCCCcEEEecCCcc
Q 003140 327 FIANNSLSGSIPSSIWQSRTLNATETFILDFQN------NNLT-NISGSF-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 327 ~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~------N~l~-~i~~~~-~~~~l~~l~l~~Np~ 384 (845)
+|++|+|++ +|..+..+.. |+.|+|++ |++. .+|..+ .++.++.|+|++|++
T Consensus 759 ~Ls~N~L~~-lp~~l~~L~~-----L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 759 DVSYNCFSS-FPTQPLNSSQ-----LKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp ECCSSCCSS-CCCGGGGCTT-----CCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred EeCCCCCCc-cchhhhcCCC-----CCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 888888886 6777765544 44677765 4443 445444 477777777777776
No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=306.32 Aligned_cols=204 Identities=30% Similarity=0.482 Sum_probs=175.5
Q ss_pred hcCCCCCccccccCceEEEEEEe-----CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--eE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-----~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~ 695 (845)
.++|.+.+.||+|+||.||+|.+ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35678889999999999999984 368999999998766666788999999999999999999999986654 67
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999997643 45899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
..... .........++..|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 196 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 196 PQDKE----YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp CSSCS----EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred ccccc----ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 43221 01112334577889999999988899999999999999999999999863
No 240
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.8e-33 Score=332.91 Aligned_cols=197 Identities=29% Similarity=0.428 Sum_probs=165.2
Q ss_pred ccccccCceEEEEEEeC---CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEEEcCCC
Q 003140 630 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~---~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~~~~ 704 (845)
+.||+|+||.||+|.+. .++.||||+++... ....++|.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 46889999987543 2346789999999999999999999999964 568899999999
Q ss_pred CCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCcc
Q 003140 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (845)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 784 (845)
|+|.++++.. ..+++..++.++.||++||+|||+++ ||||||||+|||++.++.+||+|||+|+.......
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---- 524 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---- 524 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcc----
Confidence 9999999654 46899999999999999999999998 99999999999999999999999999987643221
Q ss_pred ccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
.........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 577 (635)
T 4fl3_A 525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 577 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 0112233456789999999999999999999999999999998 999997644
No 241
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.3e-33 Score=308.84 Aligned_cols=203 Identities=26% Similarity=0.381 Sum_probs=172.7
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----CeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~ 695 (845)
.++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457999999999999999999965 68899999987533 33457899999999999999999999999654 468
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||++ |+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999997 6999998653 5899999999999999999999998 999999999999999999999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 179 ~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 179 DPDHD----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp CGGGC----BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCC----ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 42210 0111234579999999998754 558999999999999999999999997654
No 242
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.2e-32 Score=314.78 Aligned_cols=208 Identities=23% Similarity=0.350 Sum_probs=175.1
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCC-CceeeEEEEEeeCCeEEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H-~nIv~l~g~~~~~~~~~LV~E 700 (845)
.++|.+.+.||+|+||.||+|.. .+++.||||++..... .+++.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 36899999999999999999996 5789999998765432 2358899999999976 566667777788889999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE---cCCCcEEEEecCCcccCCC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 777 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---~~~~~~kl~DFGla~~~~~ 777 (845)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+++ ||||||||+|||+ +.++.+||+|||+++....
T Consensus 84 ~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999753 346999999999999999999999998 9999999999999 6889999999999987654
Q ss_pred CCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
................||..|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~ 218 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA 218 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 332211112223456799999999999999999999999999999999999999976443
No 243
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=340.41 Aligned_cols=299 Identities=22% Similarity=0.221 Sum_probs=262.8
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
..++.|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 47899999999999998999999999999999999999988999999999999999999999888999999999999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|++++..+..|.++++|+.|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|++++|++++.
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l 416 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENL 416 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSS
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccC
Confidence 99999988888999999999999999999842 33889999999999999 45543 46899999999999975
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCC--CCCCCCccEEEcccccCCcCCC-----CCCC-ccccCEEEccCCcCCCCc
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPD--LSRIPNLGYLDLSSNQLNGSIP-----PGRL-SLNITTIKLSNNKLTGTI 313 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~--l~~l~~L~~L~Ls~N~l~~~ip-----~~~~-~~~L~~L~Ls~N~l~~~~ 313 (845)
..+..+.++++|+.|+|++|++++..+. +..+++|+.|++++|.+++..+ ..+. ..+|+.|+|++|+|++..
T Consensus 417 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 496 (844)
T 3j0a_A 417 DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLP 496 (844)
T ss_dssp TTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCC
T ss_pred chhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccC
Confidence 5555677999999999999999987654 6778999999999999984333 2232 348999999999999999
Q ss_pred ccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCCccc
Q 003140 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQF 393 (845)
Q Consensus 314 p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~~~ 393 (845)
|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++++... ++.+..+++++|||.|+|+..+|
T Consensus 497 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-------~~L~~L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~c~~~~f 568 (844)
T 3j0a_A 497 PGVFSHLTALRGLSLNSNRLTVLSHNDLP-------ANLEILDISRNQLLAPNPDV-FVSLSVLDITHNKFICECELSTF 568 (844)
T ss_dssp TTSSSSCCSCSEEEEESCCCSSCCCCCCC-------SCCCEEEEEEECCCCCCSCC-CSSCCEEEEEEECCCCSSSCCSH
T ss_pred hhHccchhhhheeECCCCCCCccChhhhh-------ccccEEECCCCcCCCCChhH-hCCcCEEEecCCCcccccccHHH
Confidence 99999999999999999999976665542 56789999999999887754 56889999999999999999999
Q ss_pred cCCC
Q 003140 394 CGSH 397 (845)
Q Consensus 394 ~~~~ 397 (845)
..|.
T Consensus 569 ~~~~ 572 (844)
T 3j0a_A 569 INWL 572 (844)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
No 244
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=7.8e-33 Score=305.28 Aligned_cols=207 Identities=26% Similarity=0.390 Sum_probs=172.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----CeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~ 695 (845)
.++|.+.+.||+|+||.||+|... +|+.||||++.... .....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367888999999999999999975 68999999987533 33456788999999999999999999998654 678
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||++ |+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999997 799999865 35899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccc---cceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVP---AHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......... ........||..|+|||++.. ..++.++|||||||++|||++|+.||...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 4322111000 011233578999999998764 778999999999999999999999997654
No 245
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1e-32 Score=307.99 Aligned_cols=203 Identities=24% Similarity=0.301 Sum_probs=174.0
Q ss_pred HHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CC-----ceeeEEEEEeeCC
Q 003140 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEG 693 (845)
Q Consensus 621 ~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~-----nIv~l~g~~~~~~ 693 (845)
...++|.+.+.||+|+||.||+|... +++.||||+++.. ....+++..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999965 6889999999753 334567888999988885 55 4999999999999
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc--CCCcEEEEecCC
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKFTAKVADFGL 771 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~--~~~~~kl~DFGl 771 (845)
..++||||++ |+|.+++.......+++..+..++.|++.||.|||++ +.+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 6999999877666799999999999999999999952 12399999999999995 478899999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 208 a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 208 SCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9875321 234568999999999999999999999999999999999999998654
No 246
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.7e-33 Score=305.76 Aligned_cols=207 Identities=26% Similarity=0.357 Sum_probs=161.9
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe-
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE- 694 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~- 694 (845)
.......++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345667789999999999999999999975 68999999886532 223466788888999999999999999866443
Q ss_pred ------EEEEEEcCCCCCHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHH--hCCCCCeEecCCCCCCEEEcC-CCc
Q 003140 695 ------QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLH--TEADPPVFHRDIKASNILLDH-KFT 763 (845)
Q Consensus 695 ------~~LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~iiHrDLk~~NILl~~-~~~ 763 (845)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999975 56555443 34556899999999999999999999 877 999999999999997 899
Q ss_pred EEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 764 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
+||+|||+++...... ......||..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 171 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 236 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236 (360)
T ss_dssp EEECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEEeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 9999999998764321 22345689999999998765 48999999999999999999999997654
No 247
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.4e-33 Score=308.23 Aligned_cols=196 Identities=27% Similarity=0.412 Sum_probs=168.0
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE----
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ---- 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~---- 695 (845)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888999999999999999965 68999999987542 33357889999999999999999999999877654
Q ss_pred --EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 696 --MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 696 --~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
++||||++ |+|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 78988873 34899999999999999999999998 9999999999999999999999999997
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+
T Consensus 193 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 246 (371)
T 4exu_A 193 HADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccc----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5432 1234568999999999987 789999999999999999999999997654
No 248
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.8e-33 Score=302.51 Aligned_cols=212 Identities=24% Similarity=0.343 Sum_probs=173.3
Q ss_pred ccchHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCC--ChhhHHHHHHHHHHHHhcC--CCceeeEEEE
Q 003140 613 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH--HRNLVSLVGY 688 (845)
Q Consensus 613 ~~~~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~--~~~~~~~~~~Ei~~l~~l~--H~nIv~l~g~ 688 (845)
.+.++.+....++|.+.+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ |+||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 34455555667789999999999999999999988999999998643 3344578999999999996 5999999999
Q ss_pred EeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003140 689 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (845)
Q Consensus 689 ~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~D 768 (845)
+.+.+..++||| +.+++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||+++ +.+||+|
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECC
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEee
Confidence 999999999999 5689999999764 36899999999999999999999998 999999999999965 8999999
Q ss_pred cCCcccCCCCCCCCccccceeecccCCCCccchhhhcC-----------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 769 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
||+++...... .........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 170 fg~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 170 FGIANQMQPDT-----TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp CSSSCC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred ccccccccCcc-----ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 99998654221 1112234568999999999875 478899999999999999999999997643
No 249
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.5e-32 Score=302.96 Aligned_cols=199 Identities=22% Similarity=0.370 Sum_probs=173.9
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CC-cEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc------eeeEEEEEeeCCe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 694 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g-~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~n------Iv~l~g~~~~~~~ 694 (845)
.++|.+.+.||+|+||.||+|... ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999964 34 78999998753 344567889999999997765 9999999999999
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE----------------
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---------------- 758 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl---------------- 758 (845)
.++||||+ ++++.+++.......+++..++.++.||++||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 678888887766667999999999999999999999998 9999999999999
Q ss_pred ---cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 759 ---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 759 ---~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
+.++.+||+|||+++..... .....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 67889999999999864321 23456899999999999999999999999999999999999999765
Q ss_pred C
Q 003140 836 K 836 (845)
Q Consensus 836 ~ 836 (845)
.
T Consensus 243 ~ 243 (355)
T 2eu9_A 243 E 243 (355)
T ss_dssp S
T ss_pred C
Confidence 4
No 250
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3e-32 Score=323.13 Aligned_cols=318 Identities=19% Similarity=0.188 Sum_probs=263.1
Q ss_pred CCCCCC--CcceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchh
Q 003140 61 DPCTSN--WTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (845)
Q Consensus 61 ~~c~~~--w~Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 134 (845)
..|.|. +.-+.|...... .-..+++.|+|++|.+++..|..|+.+++|++|+|++|++++..|..|.++++|++
T Consensus 6 ~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 85 (606)
T 3t6q_A 6 QKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDT 85 (606)
T ss_dssp CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCe
Confidence 345442 456888654322 23457999999999999998999999999999999999999988999999999999
Q ss_pred hhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccc
Q 003140 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL 214 (845)
Q Consensus 135 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 214 (845)
|+|++|++++..|..|+++++|++|+|++|++++..+..+.++++|++|+|++|++++.....+..+++|++|++++|++
T Consensus 86 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 165 (606)
T 3t6q_A 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAI 165 (606)
T ss_dssp EECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCC
T ss_pred eeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcc
Confidence 99999999988999999999999999999999987788999999999999999999975545555699999999999999
Q ss_pred ccCCCcccCCCCCCc--EEEccCCcCCCCCCcccccc-------------------------------------------
Q 003140 215 TGYLPPELSELPKLL--ILQLDNNNFEGTTIPASYSN------------------------------------------- 249 (845)
Q Consensus 215 ~~~~p~~l~~l~~L~--~L~Ls~N~l~~~~~p~~~~~------------------------------------------- 249 (845)
++..+..++.+++|+ .|++++|++++ ..|..+..
T Consensus 166 ~~~~~~~~~~l~~L~~l~L~l~~n~l~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~ 244 (606)
T 3t6q_A 166 HYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS 244 (606)
T ss_dssp CEECHHHHHTTTTCCSEEEECTTCCCCE-ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCC
T ss_pred cccChhhhhhhcccceeEEecCCCccCc-cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccC
Confidence 988888899999999 89999999986 34443322
Q ss_pred ------C--CCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCC
Q 003140 250 ------M--SKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSG 319 (845)
Q Consensus 250 ------l--~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~ 319 (845)
+ .+|+.|++++|.+++.++. +..+++|++|++++|.++ .+|..+.. .+|++|++++|++++..|..+..
T Consensus 245 ~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~ 323 (606)
T 3t6q_A 245 PAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASN 323 (606)
T ss_dssp GGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGG
T ss_pred hhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhc
Confidence 1 1678888888888887775 888899999999999998 67765543 48999999999999888888999
Q ss_pred CCCCCeEecccccCcccCChh-hhhhccCCCCcceEEEccCCCCCCCC---CCC-CCCCCcEEEecCCccc
Q 003140 320 LPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNIS---GSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 320 l~~L~~L~L~~N~l~~~ip~~-l~~l~~l~~~~l~~L~ls~N~l~~i~---~~~-~~~~l~~l~l~~Np~~ 385 (845)
+++|++|++++|++.+.+|.. +..+ ++|+.|++++|+++.++ ..+ .++.++.|++++|.+.
T Consensus 324 l~~L~~L~l~~n~~~~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 389 (606)
T 3t6q_A 324 FPSLTHLSIKGNTKRLELGTGCLENL-----ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389 (606)
T ss_dssp CTTCSEEECCSCSSCCBCCSSTTTTC-----TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCE
T ss_pred cCcCCEEECCCCCcccccchhhhhcc-----CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCC
Confidence 999999999999988877764 4443 44568888888887764 333 5788888888888754
No 251
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-34 Score=311.59 Aligned_cols=199 Identities=26% Similarity=0.438 Sum_probs=154.1
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHh--cCCCceeeEEEEEeeCC----eEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQM 696 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~g~~~~~~----~~~ 696 (845)
.++|.+.+.||+|+||.||+|... |+.||||++... ..+++.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 367899999999999999999874 899999998653 34567888888887 79999999999998776 789
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 768 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDLk~~NILl~~~~~~kl~D 768 (845)
+||||+++|+|.++++.. .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999653 5778889999999999999999 766 99999999999999999999999
Q ss_pred cCCcccCCCCCCCCccccceeecccCCCCccchhhhcCC------CCCchhhHHHHHHHHHHHHhC----------CCCC
Q 003140 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 832 (845)
Q Consensus 769 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwS~Gvvl~elltG----------~~Pf 832 (845)
||+++........ .........||+.|+|||++.+. .++.++|||||||++|||+|| +.||
T Consensus 152 Fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 152 LGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp CCC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred cCcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 9999765432210 11112334699999999999776 344689999999999999999 7777
Q ss_pred CC
Q 003140 833 SH 834 (845)
Q Consensus 833 ~~ 834 (845)
..
T Consensus 229 ~~ 230 (303)
T 3gxj_A 229 YD 230 (303)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 252
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.6e-32 Score=301.30 Aligned_cols=206 Identities=25% Similarity=0.396 Sum_probs=173.1
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHh--cCCCceeeEEEEEeeCC-
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG- 693 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~--l~H~nIv~l~g~~~~~~- 693 (845)
.......++|.+.+.||+|+||.||+|.. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++...+
T Consensus 35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 35 LVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred eecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 33455667899999999999999999998 5899999998643 35678889999887 68999999999998776
Q ss_pred ---eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeEecCCCCCCEEEcCCC
Q 003140 694 ---EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKF 762 (845)
Q Consensus 694 ---~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~iiHrDLk~~NILl~~~~ 762 (845)
..++||||+++|+|.+++... .+++..++.++.|+++||+||| +.+ |+||||||+|||++.++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNG 184 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTS
T ss_pred ccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCC
Confidence 789999999999999999753 5899999999999999999999 666 99999999999999999
Q ss_pred cEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCC------CCchhhHHHHHHHHHHHHhC--------
Q 003140 763 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTG-------- 828 (845)
Q Consensus 763 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~DvwS~Gvvl~elltG-------- 828 (845)
.+||+|||+++........ .........||+.|+|||++.+.. ++.++|||||||++|||+||
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp CEEECCCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CEEEEECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999765432100 011224457999999999997652 34789999999999999999
Q ss_pred --CCCCCCC
Q 003140 829 --MQPISHG 835 (845)
Q Consensus 829 --~~Pf~~~ 835 (845)
+.||...
T Consensus 262 ~~~~p~~~~ 270 (342)
T 1b6c_B 262 DYQLPYYDL 270 (342)
T ss_dssp CCCCTTTTT
T ss_pred ccccCcccc
Confidence 7888653
No 253
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.5e-33 Score=298.34 Aligned_cols=204 Identities=27% Similarity=0.415 Sum_probs=164.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC--CCc--EEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~--~g~--~vAVK~~~~~---~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 695 (845)
.++|.+.+.||+|+||.||+|.+. +++ .||||+++.. .....+++.+|++++++++||||+++++++.+.. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999853 333 6899988754 2334578999999999999999999999998765 7
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 89999999999999997642 45889999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
..... .........+|..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 172 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 228 (291)
T 1u46_A 172 PQNDD----HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 228 (291)
T ss_dssp CC-CC----EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccc----chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccC
Confidence 43221 1112233457889999999998889999999999999999999 99999754
No 254
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.6e-32 Score=299.52 Aligned_cols=202 Identities=28% Similarity=0.405 Sum_probs=153.5
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC-hhhHHHHHHHHH-HHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~-~~~~~~~~~Ei~-~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|...+.||+|+||.||+|... +|+.||||++.... ....+++..|+. +++.++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467888999999999999999975 78999999987643 333456666766 677789999999999999999999999
Q ss_pred EcCCCCCHHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 700 EFMSNGTLRDQLSA---KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 700 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
||++ |+|.+++.. .....+++..+..++.|+++||.|||+. + |+||||||+|||++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9997 588887753 2356789999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceeecccCCCCccchhhh----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... .......||..|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (327)
T 3aln_A 177 VDS--------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN 233 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred ccc--------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 321 112334689999999998 45678999999999999999999999997643
No 255
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.1e-33 Score=307.09 Aligned_cols=199 Identities=21% Similarity=0.309 Sum_probs=170.7
Q ss_pred hcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-----------CCceeeEEEEEe
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----------HRNLVSLVGYCD 690 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-----------H~nIv~l~g~~~ 690 (845)
.++|.+.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35788999999999999999996 47899999998753 334567889999999886 899999999987
Q ss_pred eCC----eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEc------
Q 003140 691 EEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLD------ 759 (845)
Q Consensus 691 ~~~----~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~------ 759 (845)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 654 789999999 89999999876666799999999999999999999998 8 99999999999994
Q ss_pred CCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 760 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 760 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred CcceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 3448999999999865321 233468999999999999999999999999999999999999997543
No 256
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.2e-32 Score=301.81 Aligned_cols=197 Identities=22% Similarity=0.351 Sum_probs=147.8
Q ss_pred hcCCCCC-ccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCeEE
Q 003140 623 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQM 696 (845)
Q Consensus 623 ~~~f~~~-~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~ 696 (845)
.++|.+. +.||+|+||.||+|... +|+.||||++.... . ...+....++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~---~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-K---ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-H---HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-H---HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4678875 46999999999999976 68999999986532 1 12222334566799999999999876 44589
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcc
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 773 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~~kl~DFGla~ 773 (845)
+||||+++|+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+|||++. ++.+||+|||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999998876678999999999999999999999998 999999999999976 4569999999998
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 ~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 180 ETTQN---------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp EC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ecccc---------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 65321 123456899999999998888999999999999999999999999643
No 257
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=1.2e-32 Score=327.09 Aligned_cols=208 Identities=28% Similarity=0.429 Sum_probs=174.0
Q ss_pred HHHHHhcCCCCCccccccCceEEEEEEeC----CCcEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Q 003140 618 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (845)
Q Consensus 618 ~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~----~g~~vAVK~~~~~~-~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~ 692 (845)
+.....++|.+.+.||+|+||.||+|.+. .+..||||+++... ....+.|.+|+.++++++||||+++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34455678889999999999999999864 25689999987543 334578999999999999999999999985 4
Q ss_pred CeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCc
Q 003140 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (845)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla 772 (845)
+..++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 5689999999999999999754 346899999999999999999999998 999999999999999999999999999
Q ss_pred ccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 003140 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (845)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~~ 836 (845)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 539 ~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 597 (656)
T 2j0j_A 539 RYMEDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 597 (656)
T ss_dssp CSCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred eecCCCc------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 8764322 112233456789999999999999999999999999999997 999997543
No 258
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.98 E-value=1.4e-32 Score=303.49 Aligned_cols=195 Identities=27% Similarity=0.411 Sum_probs=166.6
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe------
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE------ 694 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~------ 694 (845)
++|...+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999975 68999999987532 2335678999999999999999999999977653
Q ss_pred EEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.++||||++ |+|.+++. ..+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 68877763 24899999999999999999999998 99999999999999999999999999976
Q ss_pred CCCCCCCCccccceeecccCCCCccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||...+
T Consensus 176 ~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 176 ADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp ------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred CCC----------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 431 1234568999999999877 678999999999999999999999997654
No 259
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.98 E-value=2.8e-32 Score=291.88 Aligned_cols=200 Identities=29% Similarity=0.429 Sum_probs=173.2
Q ss_pred HhcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
..++|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3468999999999999999999975 78999999986432 33467899999999999999999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC---CcEEEEecCCcccC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLA 775 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~---~~~kl~DFGla~~~ 775 (845)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.+ +.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999886543 5899999999999999999999998 9999999999999754 47999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
.... ......||..|+|||.+.+ .++.++||||||+++|||++|+.||...
T Consensus 175 ~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (287)
T 2wei_A 175 QQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225 (287)
T ss_dssp CCCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence 4221 1223357899999998865 5899999999999999999999999754
No 260
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=5.5e-33 Score=301.08 Aligned_cols=204 Identities=27% Similarity=0.410 Sum_probs=165.7
Q ss_pred HHHHhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChh------hHHHHHHHHHHHHhc----CCCceeeEEE
Q 003140 619 MALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRL----HHRNLVSLVG 687 (845)
Q Consensus 619 ~~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~------~~~~~~~Ei~~l~~l----~H~nIv~l~g 687 (845)
.....++|.+.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+++++++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999986 47899999998754322 223466799999998 8999999999
Q ss_pred EEeeCCeEEEEEEc-CCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEE
Q 003140 688 YCDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAK 765 (845)
Q Consensus 688 ~~~~~~~~~LV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~k 765 (845)
++...+..++|||| +++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ .++.+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence 99999999999999 78999999997643 5899999999999999999999998 99999999999999 889999
Q ss_pred EEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 766 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
|+|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||....
T Consensus 181 l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 243 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243 (312)
T ss_dssp ECCCSSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred EEEcchhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence 99999998764321 2345689999999998876664 58999999999999999999997543
No 261
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.98 E-value=4.5e-32 Score=291.92 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=162.4
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----------
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE---------- 691 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~---------- 691 (845)
.++|+..+.||+|+||.||+|... +|+.||||++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467888999999999999999964 789999999865 33445789999999999999999999998865
Q ss_pred ---CCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEe
Q 003140 692 ---EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (845)
Q Consensus 692 ---~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~D 768 (845)
.+..++||||+++|+|.++++.. ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 35679999999999999999764 345788999999999999999999998 99999999999999999999999
Q ss_pred cCCcccCCCCCCCCc-------cccceeecccCCCCccchhhhcCC-CCCchhhHHHHHHHHHHHHh
Q 003140 769 FGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLT 827 (845)
Q Consensus 769 FGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwS~Gvvl~ellt 827 (845)
||+++.......... ..........||..|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 999986542110000 001222345689999999999764 78999999999999999998
No 262
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=6.8e-33 Score=301.58 Aligned_cols=203 Identities=26% Similarity=0.434 Sum_probs=173.4
Q ss_pred HHHhcCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCChh------hHHHHHHHHHHHHhcC--CCceeeEEEEEe
Q 003140 620 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLH--HRNLVSLVGYCD 690 (845)
Q Consensus 620 ~~~~~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~------~~~~~~~Ei~~l~~l~--H~nIv~l~g~~~ 690 (845)
....++|.+.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|++++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 33457799999999999999999986 47899999998653221 2345778999999996 599999999999
Q ss_pred eCCeEEEEEEcCCC-CCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc-CCCcEEEEe
Q 003140 691 EEGEQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVAD 768 (845)
Q Consensus 691 ~~~~~~LV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~-~~~~~kl~D 768 (845)
+.+..++||||+.+ ++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+|||++ +++.+||+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEee
Confidence 99999999999976 8999999764 35889999999999999999999998 99999999999999 789999999
Q ss_pred cCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 769 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
||+++..... ......||..|+|||++.+..+ +.++|||||||++|||++|+.||...+
T Consensus 194 fg~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 253 (320)
T 3a99_A 194 FGSGALLKDT---------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253 (320)
T ss_dssp CTTCEECCSS---------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred Cccccccccc---------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh
Confidence 9999876422 1233568999999999987665 688999999999999999999997543
No 263
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.98 E-value=1.4e-31 Score=307.92 Aligned_cols=292 Identities=20% Similarity=0.214 Sum_probs=262.2
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
+.++..+++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 46888888888 4666554 68999999999999888899999999999999999999888999999999999999999
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCc
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIP 244 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p 244 (845)
++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~ 169 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPT 169 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS-CCH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc-cCh
Confidence 9997777789999999999999999998889999999999999999999999989999999999999999999986 456
Q ss_pred cccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccCCCCC
Q 003140 245 ASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPR 322 (845)
Q Consensus 245 ~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (845)
..+.++++|+.|+|++|++++..+ .+..+++|+.|++++|.+.+.+|.... ..+|+.|+|++|+++...+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 679999999999999999999776 589999999999999998888877654 348999999999999776688999999
Q ss_pred CCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCccc
Q 003140 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 323 L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~~ 385 (845)
|++|+|++|++++..+..+..+. +|+.|+|++|+|+.++.. + .++.++.|++++|.+.
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~-----~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELL-----RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCT-----TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCS
T ss_pred cCeeECCCCcCCccChhhccccc-----cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCc
Confidence 99999999999987777776554 466999999999988654 4 5899999999999875
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.98 E-value=1.4e-32 Score=299.86 Aligned_cols=284 Identities=21% Similarity=0.232 Sum_probs=155.9
Q ss_pred CCHHHHHHHHHHHHhcc-CCCCCCCCCC----CCCCCCCCCcceEecCCCC---CCCcceEeEEEecCCCCcccCCCCcc
Q 003140 32 TDPIEVSALRSIKKSLV-DDYSKLSNWN----RGDPCTSNWTGVLCFNTTM---DDGYLHLRELQLLNLNLSGNLSPEIG 103 (845)
Q Consensus 32 ~~~~~~~al~~~k~~~~-~~~~~l~~W~----~~~~c~~~w~Gv~C~~~~~---~~~~~~v~~L~L~~~~l~~~~~~~l~ 103 (845)
...+|++||++||+++. ++...+.+|. ....|| .|.|+.|..... .....+++.|+|++++++ .+|+.++
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 34568999999999984 5545567883 333333 599999942100 001124566666666665 5555566
Q ss_pred CCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEE
Q 003140 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (845)
Q Consensus 104 ~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (845)
.+++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..++.+++|++|+|++|++.+.+|..+...
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------ 173 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST------ 173 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc------
Confidence 6666666666666666 55555666666666666666665 555556666666666666655555555444320
Q ss_pred EccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCC
Q 003140 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (845)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (845)
..+..+..+++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +|..+.++++|+.|+|++|++
T Consensus 174 ---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~--l~~~l~~l~~L~~L~Ls~n~~ 241 (328)
T 4fcg_A 174 ---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA--LGPAIHHLPKLEELDLRGCTA 241 (328)
T ss_dssp ---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--CCGGGGGCTTCCEEECTTCTT
T ss_pred ---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--CchhhccCCCCCEEECcCCcc
Confidence 01112334555555555555555 455555555555555555555553 344455555555555555555
Q ss_pred CCCCC-CCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhh
Q 003140 264 QGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (845)
Q Consensus 264 ~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~ 342 (845)
.+..+ .+..+++|+.|++++|.+. +.+|..+.++++|++|+|++|++.+.+|..+.
T Consensus 242 ~~~~p~~~~~l~~L~~L~L~~n~~~-----------------------~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 242 LRNYPPIFGGRAPLKRLILKDCSNL-----------------------LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp CCBCCCCTTCCCCCCEEECTTCTTC-----------------------CBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred hhhhHHHhcCCCCCCEEECCCCCch-----------------------hhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 44333 2445555555555554444 44444455555555555555555555555555
Q ss_pred hhccCCCCcceEEEccCCCCCCC
Q 003140 343 QSRTLNATETFILDFQNNNLTNI 365 (845)
Q Consensus 343 ~l~~l~~~~l~~L~ls~N~l~~i 365 (845)
.+..+ +.+++..|.+..+
T Consensus 299 ~L~~L-----~~l~l~~~~~~~l 316 (328)
T 4fcg_A 299 QLPAN-----CIILVPPHLQAQL 316 (328)
T ss_dssp GSCTT-----CEEECCGGGSCC-
T ss_pred hccCc-----eEEeCCHHHHHHH
Confidence 44332 3555555554443
No 265
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=4.9e-33 Score=302.30 Aligned_cols=212 Identities=24% Similarity=0.363 Sum_probs=172.2
Q ss_pred hHHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 003140 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (845)
Q Consensus 616 ~~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~ 693 (845)
..++.+..++|.+.+.||+|+||.||+|...+ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34555667889999999999999999999754 49999987532 223356788999999999999999999999999
Q ss_pred eEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..++||||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++ ++.+||+|||+++
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred ceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 999999999999999999654 346899999999999999999999998 99999999999998 6799999999987
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcC---------CCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---------HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
........ ..........||..|+|||.+.. ..++.++|||||||++|||++|+.||....
T Consensus 178 ~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 247 (319)
T 2y4i_B 178 ISGVLQAG--RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP 247 (319)
T ss_dssp ------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred cccccccc--ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 65321111 01122334568999999999864 457899999999999999999999997543
No 266
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=3.4e-32 Score=308.67 Aligned_cols=201 Identities=25% Similarity=0.318 Sum_probs=157.5
Q ss_pred CCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEEcCC
Q 003140 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 703 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E~~~ 703 (845)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34456889999999998766668999999998653 345678999999987 89999999999999999999999995
Q ss_pred CCCHHHHHhccCCCC-----CCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCC-------------CcEE
Q 003140 704 NGTLRDQLSAKSKEP-----LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------------FTAK 765 (845)
Q Consensus 704 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~-------------~~~k 765 (845)
|+|.+++....... ..+..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 79999997643221 133345789999999999999998 9999999999999754 4899
Q ss_pred EEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 766 l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
|+|||+++........ .........||++|+|||++.+ ..++.++|||||||++|||+| |+.||...
T Consensus 169 L~DFG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSS---FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp ECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EcccccceecCCCCcc---ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 9999999876432210 0111234579999999999975 678999999999999999999 99999654
No 267
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=3.5e-32 Score=310.85 Aligned_cols=282 Identities=18% Similarity=0.200 Sum_probs=239.0
Q ss_pred CcceEeEEEecCCCCcccC-CCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCc--cCCCCcc
Q 003140 80 GYLHLRELQLLNLNLSGNL-SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEE--LGYLPKL 156 (845)
Q Consensus 80 ~~~~v~~L~L~~~~l~~~~-~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L 156 (845)
...+++.|+|++|.+.+.+ +..|..+++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. |..+++|
T Consensus 52 ~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L 131 (455)
T 3v47_A 52 RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSL 131 (455)
T ss_dssp SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTC
T ss_pred cCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccC
Confidence 3457899999999998766 457899999999999999999888989999999999999999998755554 8899999
Q ss_pred ceeecccccccCCCCcc-ccCccCCCEEEccCCCCCCCCccccCCC----------------------------------
Q 003140 157 DRIQIDQNYISGSLPKS-FANLNKTRHFHMNNNSISGQIPPELSRL---------------------------------- 201 (845)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l---------------------------------- 201 (845)
++|+|++|++++..|.. +.++++|++|++++|++++..+..+..+
T Consensus 132 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~ 211 (455)
T 3v47_A 132 EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN 211 (455)
T ss_dssp CEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTT
T ss_pred CEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccccccc
Confidence 99999999999887776 8899999999999999998877766544
Q ss_pred CCcceeeccccccccCCCcccC---------------------------------------CCCCCcEEEccCCcCCCCC
Q 003140 202 PSLVHMLLDNNNLTGYLPPELS---------------------------------------ELPKLLILQLDNNNFEGTT 242 (845)
Q Consensus 202 ~~L~~L~L~~N~l~~~~p~~l~---------------------------------------~l~~L~~L~Ls~N~l~~~~ 242 (845)
++|++|++++|++++..|..+. ..++|++|++++|++++ .
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~ 290 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA-L 290 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE-E
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc-c
Confidence 6799999999988765443321 12589999999999987 6
Q ss_pred CccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccCCC
Q 003140 243 IPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGL 320 (845)
Q Consensus 243 ~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (845)
.|..+.++++|+.|+|++|++++.++ .+..+++|+.|+|++|.+++..|..+. ..+|+.|+|++|++++..|..|.++
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 88899999999999999999999766 589999999999999999877666644 4589999999999999999999999
Q ss_pred CCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCC
Q 003140 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 367 (845)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~ 367 (845)
++|++|+|++|++++..+..+..+ ++|+.|++++|+++.-.+
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRL-----TSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTC-----TTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhHhccC-----CcccEEEccCCCcccCCC
Confidence 999999999999997555555544 456699999999986433
No 268
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=3.1e-31 Score=325.82 Aligned_cols=299 Identities=19% Similarity=0.210 Sum_probs=207.3
Q ss_pred CcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCC-cccccccccchhhhccCCCCCCCCCCccCCCCccce
Q 003140 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (845)
Q Consensus 80 ~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 158 (845)
...+++.|+|++|.+++..+..|..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|.++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 3457899999999999988899999999999999999766666 778999999999999999999888999999999999
Q ss_pred eecccccccCCCCcc--ccCccCCCEEEccCCCCCCCCc-cccCCCCCcceeeccccccccCCCcccCCC--CCCcEEEc
Q 003140 159 IQIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSEL--PKLLILQL 233 (845)
Q Consensus 159 L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L 233 (845)
|+|++|.+++.+|.. +.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999999866665 8899999999999999987655 578999999999999999988877777665 66777777
Q ss_pred cCCcCCCCCCccccccCCC------ccEEEcccCCCCCCCCC-------------------------------------C
Q 003140 234 DNNNFEGTTIPASYSNMSK------LLKLSLRNCSLQGPMPD-------------------------------------L 270 (845)
Q Consensus 234 s~N~l~~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~~~-------------------------------------l 270 (845)
+.|.+.+ ..|..+..+++ |+.|++++|.+++..+. +
T Consensus 182 ~~n~l~~-~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f 260 (844)
T 3j0a_A 182 AANSLYS-RVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTF 260 (844)
T ss_dssp CCSBSCC-CCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTT
T ss_pred CCCcccc-ccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhh
Confidence 7776665 34444444443 66666666655432221 0
Q ss_pred CC--CCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccC
Q 003140 271 SR--IPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (845)
Q Consensus 271 ~~--l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l 347 (845)
.. .++|+.|++++|.+++..|..+.. .+|+.|+|++|++++..|..|.++++|++|+|++|++++..|..+..+.
T Consensus 261 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-- 338 (844)
T 3j0a_A 261 AGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP-- 338 (844)
T ss_dssp TTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT--
T ss_pred hccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC--
Confidence 01 145556666666655444443322 2556666666666555555555566666666666665555555544333
Q ss_pred CCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcc
Q 003140 348 NATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 348 ~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~ 384 (845)
+|+.|++++|+|+.++.. + .++.++.|++++|.+
T Consensus 339 ---~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 374 (844)
T 3j0a_A 339 ---KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374 (844)
T ss_dssp ---TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCS
T ss_pred ---CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCC
Confidence 233555555555555443 2 355555555555554
No 269
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=4e-31 Score=317.83 Aligned_cols=185 Identities=23% Similarity=0.288 Sum_probs=154.1
Q ss_pred CCCCCcceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhcc
Q 003140 63 CTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLN 138 (845)
Q Consensus 63 c~~~w~Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 138 (845)
|.+.++-+.|...... +...+++.|+|++|++++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 5555666888653322 233689999999999998877889999999999999999999889999999999999999
Q ss_pred CCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCC
Q 003140 139 GNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYL 218 (845)
Q Consensus 139 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 218 (845)
+|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+..+++|++|++++|++++..
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99999665567999999999999999999888889999999999999999999888888999999999999999998776
Q ss_pred CcccC--CCCCCcEEEccCCcCCCCCCccccc
Q 003140 219 PPELS--ELPKLLILQLDNNNFEGTTIPASYS 248 (845)
Q Consensus 219 p~~l~--~l~~L~~L~Ls~N~l~~~~~p~~~~ 248 (845)
+..+. .+++|++|++++|++++ ..|..+.
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~ 192 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKE-FSPGCFH 192 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCC-BCTTGGG
T ss_pred HHHhhccccccccEEECCCCcccc-cChhhhh
Confidence 66544 45788888888888875 3444443
No 270
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=2.3e-32 Score=319.21 Aligned_cols=201 Identities=28% Similarity=0.432 Sum_probs=173.6
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee------CCeE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQ 695 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~ 695 (845)
++|.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 68999999999999999999974 6899999998754 34446789999999999999999999999765 6678
Q ss_pred EEEEEcCCCCCHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCc---EEEEecCC
Q 003140 696 MLVYEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 771 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~---~kl~DFGl 771 (845)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 346889999999999999999999998 999999999999997664 99999999
Q ss_pred cccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 171 a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~ 226 (676)
T 3qa8_A 171 AKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226 (676)
T ss_dssp CCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence 98764321 223457899999999999999999999999999999999999999754
No 271
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=8.4e-32 Score=292.31 Aligned_cols=201 Identities=25% Similarity=0.389 Sum_probs=153.2
Q ss_pred hcCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh-hhHHH-HHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKE-FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-~~~~~-~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.++|...+.||+|+||.||+|... +|+.||||++..... ....+ +.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 789999999875432 22333 445556788889999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
||+ ++.+..+... ....+++..+..++.|+++||+|||++ + |+||||||+||+++.++.+||+|||+++.....
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 5566555543 245689999999999999999999985 7 999999999999999999999999999765322
Q ss_pred CCCCccccceeecccCCCCccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~ 836 (845)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 179 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (318)
T 2dyl_A 179 --------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred --------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC
Confidence 1123446899999999984 5578899999999999999999999997643
No 272
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=6.3e-32 Score=323.91 Aligned_cols=191 Identities=23% Similarity=0.382 Sum_probs=165.6
Q ss_pred cCCCCCccccccCceEEEEEEeC--CCcEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCe-----E
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-----Q 695 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~--~g~~vAVK~~~~~-~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~-----~ 695 (845)
++|.+.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999975 6899999998653 33445678999999999999999999999987665 7
Q ss_pred EEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccC
Q 003140 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (845)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~ 775 (845)
++||||+++++|.+++.. .+++..++.++.||++||.|||+++ ||||||||+|||++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999988743 6899999999999999999999998 9999999999999986 8999999999865
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~ 834 (845)
... ....||++|+|||++.+. ++.++|||||||++|||++|..||..
T Consensus 232 ~~~-----------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 232 NSF-----------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp TCC-----------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred ccC-----------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence 321 345689999999998765 48999999999999999999998864
No 273
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=8.3e-32 Score=304.72 Aligned_cols=202 Identities=25% Similarity=0.363 Sum_probs=160.0
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 700 (845)
...+|...+.||+|+||+||.....+|+.||||++...... .+.+|+++++++ +|||||++++++.+.+..++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 34568888999999999976555568899999998754332 356899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC-----CCcEEEEecCCcccC
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLA 775 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~-----~~~~kl~DFGla~~~ 775 (845)
|++ |+|.+++..... ...+..++.++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+|+..
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 996 799999976542 3444456789999999999999998 999999999999953 236889999999876
Q ss_pred CCCCCCCccccceeecccCCCCccchhhhc---CCCCCchhhHHHHHHHHHHHHh-CCCCCCCC
Q 003140 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (845)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwS~Gvvl~ellt-G~~Pf~~~ 835 (845)
..... .........||++|+|||++. ...++.++|||||||++|||++ |+.||...
T Consensus 174 ~~~~~----~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~ 233 (432)
T 3p23_A 174 AVGRH----SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS 233 (432)
T ss_dssp ----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred cCCCc----ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence 43210 012234467999999999997 4567889999999999999999 99999543
No 274
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=3e-31 Score=308.60 Aligned_cols=290 Identities=19% Similarity=0.214 Sum_probs=205.2
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 58999999999999888889999999999999999999888999999999999999999999 67776 8999999999
Q ss_pred ccccccC-CCCccccCccCCCEEEccCCCCCCCCccccCCCCCc--ceeecccccc--ccCCCcccCCCC----------
Q 003140 162 DQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL--VHMLLDNNNL--TGYLPPELSELP---------- 226 (845)
Q Consensus 162 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~---------- 226 (845)
++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|++ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999997 478999999999999999999874 345555555 6666666666 444444444422
Q ss_pred -------------------------------------------------------------------------CCcEEEc
Q 003140 227 -------------------------------------------------------------------------KLLILQL 233 (845)
Q Consensus 227 -------------------------------------------------------------------------~L~~L~L 233 (845)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 4555555
Q ss_pred cCCcCCCCCCcccc-----------------------------------------------------ccCCCccEEEccc
Q 003140 234 DNNNFEGTTIPASY-----------------------------------------------------SNMSKLLKLSLRN 260 (845)
Q Consensus 234 s~N~l~~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~ 260 (845)
++|+++| .+|..+ ..+++|++|++++
T Consensus 255 ~~n~l~~-~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 255 SNVKLQG-QLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSN 333 (520)
T ss_dssp EEEEEES-CCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCS
T ss_pred ecccccC-ccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeEC
Confidence 5555554 344443 3455555566666
Q ss_pred CCCCCCCC-CCCCCCCccEEEcccccCCc--CCCCCC-CccccCEEEccCCcCCCCccc-ccCCCCCCCeEecccccCcc
Q 003140 261 CSLQGPMP-DLSRIPNLGYLDLSSNQLNG--SIPPGR-LSLNITTIKLSNNKLTGTIPS-NFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 261 N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~--~ip~~~-~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 335 (845)
|++++..+ .+..+++|+.|++++|++++ .+|..+ ...+|+.|+|++|++++.+|. .+..+++|++|++++|++++
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 65555322 35555566666666666553 222221 223566666666666653443 25555666666666666655
Q ss_pred cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccc
Q 003140 336 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 336 ~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~~~l~~l~l~~Np~~ 385 (845)
.+|..+. +.|+.|++++|+|+.+|..+ .++.++.|++++|++.
T Consensus 414 ~~~~~l~-------~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 414 TIFRCLP-------PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp GGGGSCC-------TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred chhhhhc-------ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 5554431 46778888888888888765 6888888888888765
No 275
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=5.8e-33 Score=304.28 Aligned_cols=192 Identities=23% Similarity=0.281 Sum_probs=161.7
Q ss_pred hcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCC--------hhhHHHHHHHHHHHHhcC---------CCceeeE
Q 003140 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--------LQGEKEFLTEIQFLSRLH---------HRNLVSL 685 (845)
Q Consensus 623 ~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~--------~~~~~~~~~Ei~~l~~l~---------H~nIv~l 685 (845)
.++|.+.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999998 78999999987542 223477899999998885 8888888
Q ss_pred EEEEe------------------------------eCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHH
Q 003140 686 VGYCD------------------------------EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI 735 (845)
Q Consensus 686 ~g~~~------------------------------~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL 735 (845)
.+.+. +.+..++||||+++|++.+.+.+ ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 87643 26789999999999976666533 4589999999999999999
Q ss_pred HHHH-hCCCCCeEecCCCCCCEEEcCCC--------------------cEEEEecCCcccCCCCCCCCccccceeecccC
Q 003140 736 LYLH-TEADPPVFHRDIKASNILLDHKF--------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG 794 (845)
Q Consensus 736 ~yLH-~~~~~~iiHrDLk~~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~g 794 (845)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+.... ....|
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------~~~~g 239 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------GIVVF 239 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------TEEEC
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------CcEEE
Confidence 9999 888 99999999999999887 999999999986531 12369
Q ss_pred CCCccchhhhcCCCCCchhhHHHHHHH-HHHHHhCCCCCCC
Q 003140 795 TPGYLDPEYFLTHKLTDKSDVYSLGVV-FLELLTGMQPISH 834 (845)
Q Consensus 795 t~~y~aPE~~~~~~~~~~~DvwS~Gvv-l~elltG~~Pf~~ 834 (845)
|+.|+|||++.+.. +.++||||+|++ .+++++|..||..
T Consensus 240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~ 279 (336)
T 2vuw_A 240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN 279 (336)
T ss_dssp CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence 99999999998766 899999998777 8888999999853
No 276
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.6e-30 Score=282.47 Aligned_cols=290 Identities=21% Similarity=0.312 Sum_probs=203.1
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
+++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 3445555555655 3454443 577788888888876666677788888888888888877667778888888888888
Q ss_pred cccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccccc--CCCcccCCCCCCcEEEccCCcCCC
Q 003140 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG--YLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|+++. ..+..+..+++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 88877 4554443 678888888888876666677778888888888887753 566677778888888888888763
Q ss_pred CCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccC
Q 003140 241 TTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFS 318 (845)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~ 318 (845)
+|..+. ++|++|++++|++++..+ .+..+++|+.|++++|.+++..+..+. ..+|+.|+|++|+++ .+|..+.
T Consensus 186 --l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 260 (330)
T 1xku_A 186 --IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLA 260 (330)
T ss_dssp --CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTT
T ss_pred --CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhc
Confidence 454443 678888888888877654 477778888888888888765554433 347888888888887 6777788
Q ss_pred CCCCCCeEecccccCcccCChhhhhhcc-CCCCcceEEEccCCCCCC--CCC-CC-CCCCCcEEEecCCc
Q 003140 319 GLPRLQRLFIANNSLSGSIPSSIWQSRT-LNATETFILDFQNNNLTN--ISG-SF-NIPPNVTVRLRGNP 383 (845)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~l~~l~~-l~~~~l~~L~ls~N~l~~--i~~-~~-~~~~l~~l~l~~Np 383 (845)
.+++|++|+|++|++++..+..|..... .....+..|++++|.+.. ++. .+ .++.+..+++++|.
T Consensus 261 ~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 261 DHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 8888888888888888655555543321 123567788888888864 332 23 37778888888873
No 277
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.3e-30 Score=283.21 Aligned_cols=289 Identities=22% Similarity=0.316 Sum_probs=209.9
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
+++.+++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4455666666666 4565553 578888888888887667778888888888888888887777788888888888888
Q ss_pred cccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccc--cCCCcccCCCCCCcEEEccCCcCCC
Q 003140 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT--GYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|+++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 88887 4555444 77888888888888666666788888888888888885 3666777777 88888888888874
Q ss_pred CCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC-ccccCEEEccCCcCCCCcccccC
Q 003140 241 TTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFS 318 (845)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~ 318 (845)
+|..+. ++|++|++++|++++.++ .+..+++|+.|++++|.+++..+..+. ..+|+.|+|++|+++ .+|..+.
T Consensus 187 --l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~ 261 (332)
T 2ft3_A 187 --IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLP 261 (332)
T ss_dssp --CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGG
T ss_pred --cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhh
Confidence 455443 678888888888887765 477888888888888888865554433 347888888888888 6777788
Q ss_pred CCCCCCeEecccccCcccCChhhhhhc-cCCCCcceEEEccCCCCC--CCCCC-C-CCCCCcEEEecCCc
Q 003140 319 GLPRLQRLFIANNSLSGSIPSSIWQSR-TLNATETFILDFQNNNLT--NISGS-F-NIPPNVTVRLRGNP 383 (845)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~l~~l~-~l~~~~l~~L~ls~N~l~--~i~~~-~-~~~~l~~l~l~~Np 383 (845)
.+++|++|++++|++++..+..+.... ......++.|++++|.+. .++.. + .++.+..+++++|.
T Consensus 262 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 262 DLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888888888888888866555554432 112455778888888887 44433 3 47788888888774
No 278
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=2.8e-30 Score=303.27 Aligned_cols=147 Identities=17% Similarity=0.212 Sum_probs=125.1
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
+.++++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999996 777665 89999999999999888899999999999999999999888999999999999999999
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCC-CCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (845)
+|+ .+|.. .+++|++|+|++|++++ .+|..++++++|++|+|++|++++.....+..+ +|++|+|++|++
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l 181 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSY 181 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeecccc
Confidence 999 56666 89999999999999996 456899999999999999999875322222222 226666666655
No 279
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7.2e-30 Score=278.91 Aligned_cols=288 Identities=23% Similarity=0.299 Sum_probs=233.4
Q ss_pred CCCCCCCcceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhh
Q 003140 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (845)
..|.|.|+.+.|...... .....++.|+|++|++++..+..|+.+++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 346667999999654322 1235788999999999987777899999999999999999988888999999999999
Q ss_pred ccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCC--CCccccCCCCCcceeecccccc
Q 003140 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNL 214 (845)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l 214 (845)
|++|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.+.. ..+..+..+++|++|++++|++
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 6676665 789999999999998878889999999999999999863 6677888999999999999999
Q ss_pred ccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCC
Q 003140 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (845)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (845)
+. +|..+. ++|++|+|++|++++ ..+..+.++++|+.|+|++|++++.++ .+..+++|+.|++++|+++ .+|..
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCE-ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh
Confidence 84 555554 789999999999986 567889999999999999999998776 5888899999999999998 67765
Q ss_pred CC-ccccCEEEccCCcCCCCcccccCCC------CCCCeEecccccCcc--cCChhhhhhccCCCCcceEEEccCCC
Q 003140 294 RL-SLNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLSG--SIPSSIWQSRTLNATETFILDFQNNN 361 (845)
Q Consensus 294 ~~-~~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~ip~~l~~l~~l~~~~l~~L~ls~N~ 361 (845)
+. ..+|+.|+|++|+|++..+..|... +.|+.|++++|.+.. ..|..+..+ ..++.++|++|+
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~-----~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV-----YVRAAVQLGNYK 330 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC-----CCGGGEEC----
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc-----cceeEEEecccC
Confidence 44 4589999999999998877777643 778899999999863 344555443 345688999885
No 280
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=295.11 Aligned_cols=279 Identities=15% Similarity=0.178 Sum_probs=195.0
Q ss_pred cCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCC
Q 003140 90 LNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS 169 (845)
Q Consensus 90 ~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 169 (845)
++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.
T Consensus 39 ~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 115 (353)
T 2z80_A 39 SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 115 (353)
T ss_dssp CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSC
T ss_pred CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcC
Confidence 445565 4565554 4788888888888876666788888888888888888877777888888888888888888865
Q ss_pred CCccccCccCCCEEEccCCCCCCCCc-cccCCCCCcceeecccc-ccccCCCcccCCCCCCcEEEccCCcCCCCCCcccc
Q 003140 170 LPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNN-NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY 247 (845)
Q Consensus 170 ~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~ 247 (845)
.+..+.++++|++|+|++|+++...+ ..+..+++|++|++++| .++...+..|..+++|++|++++|++++ ..|..+
T Consensus 116 ~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~l 194 (353)
T 2z80_A 116 SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQS-YEPKSL 194 (353)
T ss_dssp CHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECTTTT
T ss_pred CHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCc-cCHHHH
Confidence 55568888888888888888884333 36778888888888888 4666666777888888888888888876 467777
Q ss_pred ccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeE
Q 003140 248 SNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 326 (845)
Q Consensus 248 ~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 326 (845)
.++++|++|++++|+++..+.. +..+++|+.|++++|.+++..+..... ......++.+
T Consensus 195 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------~~~~~~l~~l 254 (353)
T 2z80_A 195 KSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST--------------------GETNSLIKKF 254 (353)
T ss_dssp TTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC--------------------------CCCCCCEE
T ss_pred hccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc--------------------ccccchhhcc
Confidence 7788888888888877654433 334677777777777777543322110 1123344455
Q ss_pred ecccccCcc----cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCC-CccccCCC
Q 003140 327 FIANNSLSG----SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTN-AEQFCGSH 397 (845)
Q Consensus 327 ~L~~N~l~~----~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~Np~~c~~~-~~~~~~~~ 397 (845)
+|++|.+++ .+|..+..+. +|+.|++++|+|+.+|... .++.++.|++++|||.|+|+ +.++..|.
T Consensus 255 ~L~~~~l~~~~l~~l~~~l~~l~-----~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~l~~l~~~~ 327 (353)
T 2z80_A 255 TFRNVKITDESLFQVMKLLNQIS-----GLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 327 (353)
T ss_dssp EEESCBCCHHHHHHHHHHHHTCT-----TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHH
T ss_pred ccccccccCcchhhhHHHHhccc-----CCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCCcHHHHHHH
Confidence 555555543 2444444333 3446777777777666653 47888999999999999996 55555554
No 281
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=4.1e-30 Score=281.12 Aligned_cols=287 Identities=23% Similarity=0.312 Sum_probs=227.2
Q ss_pred CCCCCCCcceEecCCCCC----CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhh
Q 003140 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~~----~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (845)
..|.|.|+.+.|...... ....+++.|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 345567888888654322 1235788899999999887778899999999999999999888888899999999999
Q ss_pred ccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCC--CCCccccCCCCCcceeecccccc
Q 003140 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS--GQIPPELSRLPSLVHMLLDNNNL 214 (845)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l 214 (845)
|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999988 6676665 78999999999998777777889999999999999985 3667778777 899999999998
Q ss_pred ccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCC
Q 003140 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (845)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~ 293 (845)
++ +|..+. ++|++|+|++|++++ ..+..+.++++|+.|+|++|++++.++ .+..+++|+.|++++|+++ .+|..
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCC-CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 85 565554 689999999999986 466788889999999999999988776 4888889999999999998 67765
Q ss_pred CC-ccccCEEEccCCcCCCCcccccCCC------CCCCeEecccccCc--ccCChhhhhhccCCCCcceEEEccCCC
Q 003140 294 RL-SLNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLS--GSIPSSIWQSRTLNATETFILDFQNNN 361 (845)
Q Consensus 294 ~~-~~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~ip~~l~~l~~l~~~~l~~L~ls~N~ 361 (845)
+. ..+|+.|+|++|+|++..+..|..+ ++|+.|++++|.+. +..|..+..+.. |+.+++++|+
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~-----L~~l~l~~n~ 331 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTD-----RLAIQFGNYK 331 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCC-----STTEEC----
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccch-----hhhhhccccc
Confidence 43 3479999999999988877777654 67889999999887 555666655444 4578888874
No 282
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1.4e-30 Score=278.37 Aligned_cols=173 Identities=12% Similarity=0.096 Sum_probs=151.9
Q ss_pred cCCCCCccccccCceEEEEEEeC-CCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEEE
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 699 (845)
++|.+.+.||+|+||.||+|... +|+.||||++..... ...+++.+|++++++++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57888999999999999999975 589999999976432 33478999999999999999999999999999999999
Q ss_pred EcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCC
Q 003140 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (845)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~ 779 (845)
||+++++|.++++.. ........++.|+++||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999542 345578889999999999999999 9999999999999999999998543
Q ss_pred CCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Q 003140 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (845)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~~~ 837 (845)
|++ .++.++|||||||++|||+||+.||.....
T Consensus 175 ------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 175 ------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 333 368899999999999999999999986543
No 283
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.3e-30 Score=294.27 Aligned_cols=258 Identities=18% Similarity=0.264 Sum_probs=189.0
Q ss_pred ccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccC
Q 003140 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (845)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (845)
...++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456888888888 5776654 5788888888888877788888888888888888888877778888888888888888
Q ss_pred CCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC
Q 003140 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (845)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (845)
|+|++..+..|..+++|++|+|++|+++...+..|..+++|++|+|++|+..+...+..|.++++|+.|+|++|++++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~- 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM- 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-
Confidence 8888666666777888888888888887666667777777777777774433322333466666666666666666543
Q ss_pred CCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccC
Q 003140 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (845)
Q Consensus 268 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l 347 (845)
+.+..++ +|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+.
T Consensus 212 ~~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-- 266 (452)
T 3zyi_A 212 PNLTPLV-----------------------GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA-- 266 (452)
T ss_dssp CCCTTCT-----------------------TCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT--
T ss_pred ccccccc-----------------------cccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC--
Confidence 2344444 455555555555656667777777777777777777777676665543
Q ss_pred CCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCCccccCCC
Q 003140 348 NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 348 ~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
+|+.|+|++|+|+.++... .++.++.|+|++|||.|||++.++..|.
T Consensus 267 ---~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l 315 (452)
T 3zyi_A 267 ---SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWL 315 (452)
T ss_dssp ---TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHHHH
T ss_pred ---CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHHHHH
Confidence 3457888888887777653 4888999999999999999999887665
No 284
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=292.01 Aligned_cols=259 Identities=20% Similarity=0.268 Sum_probs=193.8
Q ss_pred ccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccC
Q 003140 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (845)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (845)
.+.++.++++++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 457888999998 7787665 6899999999999988888899999999999999999987788899999999999999
Q ss_pred CCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC
Q 003140 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (845)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (845)
|+|+...+..|..+++|++|+|++|+++...+..|..+++|++|+|++|+..+...+..|.++++|+.|+|++|+++..+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 99986666678888899999999998887777778888888888888854433233446777777777777777776442
Q ss_pred CCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccC
Q 003140 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (845)
Q Consensus 268 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l 347 (845)
.+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|++++..|..|..+.
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~-----------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-- 255 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLS-----------------------AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-- 255 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCC-----------------------EECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT--
T ss_pred -ccCCCcccCEEECCCCccC-----------------------ccChhhhccCccCCEEECCCCceeEEChhhhcCCC--
Confidence 3555555555555555554 44555566666666666666666655555554433
Q ss_pred CCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCCccccCCCC
Q 003140 348 NATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHS 398 (845)
Q Consensus 348 ~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~ 398 (845)
+|+.|+|++|+|+.++... .++.+..|+|++|||.|||++.+|..|..
T Consensus 256 ---~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~ 305 (440)
T 3zyj_A 256 ---SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIK 305 (440)
T ss_dssp ---TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHHH
T ss_pred ---CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHHH
Confidence 3346666666666666543 47888999999999999999999877653
No 285
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=5.8e-31 Score=296.53 Aligned_cols=197 Identities=17% Similarity=0.175 Sum_probs=154.4
Q ss_pred cCCCCCccccccCceEEEEEEe-CCCcEEEEEEccCCCh---hhHHHHHHHHHHHHhcCC-Cce----------e-----
Q 003140 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHH-RNL----------V----- 683 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~---~~~~~~~~Ei~~l~~l~H-~nI----------v----- 683 (845)
.+|...+.||+|+||.||+|.+ .+|+.||||++..... ...+.|.+|+.+++.++| +|. +
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4466678999999999999995 4799999999874322 225679999999999987 221 1
Q ss_pred ------eEEEEEee-----CCeEEEEEEcCCCCCHHHHHh-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeE
Q 003140 684 ------SLVGYCDE-----EGEQMLVYEFMSNGTLRDQLS-----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 747 (845)
Q Consensus 684 ------~l~g~~~~-----~~~~~LV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ii 747 (845)
.++.++.. ....+++|+++ +++|.++++ ......+++..++.++.|+++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 11111111 22457777765 699999885 233456888999999999999999999998 99
Q ss_pred ecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhh----------cCCCCCchhhHHH
Q 003140 748 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF----------LTHKLTDKSDVYS 817 (845)
Q Consensus 748 HrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwS 817 (845)
||||||+|||++.++.+||+|||+++... .......| +.|+|||++ ....++.++||||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS 302 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETT----------EEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecC----------CccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence 99999999999999999999999987642 11344567 999999999 5556889999999
Q ss_pred HHHHHHHHHhCCCCCCCC
Q 003140 818 LGVVFLELLTGMQPISHG 835 (845)
Q Consensus 818 ~Gvvl~elltG~~Pf~~~ 835 (845)
|||++|||++|+.||...
T Consensus 303 lGvil~elltg~~Pf~~~ 320 (413)
T 3dzo_A 303 LGLAIYWIWCADLPNTDD 320 (413)
T ss_dssp HHHHHHHHHHSSCCCCTT
T ss_pred HHHHHHHHHHCCCCCCCc
Confidence 999999999999999754
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=1.3e-29 Score=278.83 Aligned_cols=281 Identities=21% Similarity=0.300 Sum_probs=217.9
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|++++|.+++..+ +..+++|++|+|++|.+++ +| .+.++++|++|+|++|++++. +. +..+++|++|++
T Consensus 66 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEEC
Confidence 468888888888875433 8888888888888888874 44 588888888888888888843 33 778888888888
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+++.
T Consensus 140 ~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 214 (347)
T 4fmz_A 140 GANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDI 214 (347)
T ss_dssp TTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCC
Confidence 8886554444 37888888888888888875433 7788888888888888885432 77888888888888888752
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
+. +..+++|+.|++++|++++.++ +..+++|+.|++++|.+++ ++......+|+.|++++|++++. ..+..++
T Consensus 215 --~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~ 287 (347)
T 4fmz_A 215 --TP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI--SVLNNLS 287 (347)
T ss_dssp --GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGGGCT
T ss_pred --ch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC--hhhcCCC
Confidence 22 7888889999999998887766 8888899999999998884 45444556899999999988865 4588889
Q ss_pred CCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 003140 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (845)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~ 385 (845)
+|++|++++|++++..|..+..+.. |+.|++++|+++.++....++.+..+++++|++.
T Consensus 288 ~L~~L~L~~n~l~~~~~~~l~~l~~-----L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 288 QLNSLFLNNNQLGNEDMEVIGGLTN-----LTTLFLSQNHITDIRPLASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCSEEECCSSCCCGGGHHHHHTCTT-----CSEEECCSSSCCCCGGGGGCTTCSEESSSCC---
T ss_pred CCCEEECcCCcCCCcChhHhhcccc-----CCEEEccCCccccccChhhhhccceeehhhhccc
Confidence 9999999999998888877776544 5589999999988877446888899999988863
No 287
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=3.7e-30 Score=277.16 Aligned_cols=175 Identities=23% Similarity=0.374 Sum_probs=152.7
Q ss_pred cCCCCC-ccccccCceEEEEEEe-CCCcEEEEEEccCCChhhHHHHHHHHHHH-HhcCCCceeeEEEEEee----CCeEE
Q 003140 624 NNFNSS-TQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDE----EGEQM 696 (845)
Q Consensus 624 ~~f~~~-~~LG~G~fG~Vy~~~~-~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l-~~l~H~nIv~l~g~~~~----~~~~~ 696 (845)
++|.+. +.||+|+||.||+|.. .+++.||||+++.. ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456665 7799999999999997 47899999998642 3577888888 55599999999999876 67789
Q ss_pred EEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcC---CCcEEEEecCCcc
Q 003140 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 773 (845)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~---~~~~kl~DFGla~ 773 (845)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998876678999999999999999999999998 999999999999998 7899999999986
Q ss_pred cCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 003140 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (845)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~~~ 835 (845)
... +..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 169 ETT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp ECT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ccc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 432 134678999999999999999999999654
No 288
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=1.4e-29 Score=300.13 Aligned_cols=153 Identities=20% Similarity=0.229 Sum_probs=141.9
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
..+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46899999998 5666655 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccccc-CCCcccCCCCCCcEEEccCCcCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG-YLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
++++..|..|.++++|++|+|++|.+++..+..++++++|++|+|++|++++ .+|..|+++++|++|+|++|++++
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9998889999999999999999999998877899999999999999999986 579999999999999999998875
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.2e-30 Score=279.83 Aligned_cols=255 Identities=17% Similarity=0.254 Sum_probs=148.0
Q ss_pred CCCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCC
Q 003140 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (845)
+.|.|.|.+|.|..... + .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|
T Consensus 3 ~~C~C~~~~l~c~~~~l-----------------~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n 62 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGL-----------------T-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSN 62 (306)
T ss_dssp TTCEEETTEEECCSSCC-----------------S-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCeeCCCEEEcCCCCc-----------------c-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCC
Confidence 46877899999965432 2 2232222 45556666666655333333555666666666666
Q ss_pred CCCC--CCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCc-cccCCCCCcceeeccccccccC
Q 003140 141 ELTG--SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGY 217 (845)
Q Consensus 141 ~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~ 217 (845)
+++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++++.
T Consensus 63 ~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 63 GLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp CCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred ccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 5551 12444445566666666666655 344455566666666666666654433 3555666666666666666655
Q ss_pred CCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC-
Q 003140 218 LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL- 295 (845)
Q Consensus 218 ~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~- 295 (845)
.+..+..+++|++|+|++|.+++...|..+..+++|+.|+|++|++++.++ .+..+++|+.|++++|.+++..+..+.
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 555566666666666666666542345556666666666666666666543 355666666666666666643332222
Q ss_pred ccccCEEEccCCcCCCCcccccCCCC-CCCeEecccccCccc
Q 003140 296 SLNITTIKLSNNKLTGTIPSNFSGLP-RLQRLFIANNSLSGS 336 (845)
Q Consensus 296 ~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 336 (845)
..+|+.|+|++|++++..|..+..++ +|++|+|++|++++.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 23666666666666666666666664 677777777777654
No 290
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=2.8e-29 Score=280.91 Aligned_cols=272 Identities=20% Similarity=0.205 Sum_probs=192.2
Q ss_pred ccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCC
Q 003140 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (845)
Q Consensus 102 l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (845)
-..+++|+.|++++|.++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|+
T Consensus 41 ~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 41 DITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 120 (390)
T ss_dssp SGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCC
Confidence 34578999999999999965555579999999999999999988788999999999999999999988899999999999
Q ss_pred EEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccC
Q 003140 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (845)
+|+|++|+++...+..+..+++|++|++++|++++..+..+..+++|++|+|++|++++. .+..+++|+.|++++|
T Consensus 121 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 121 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYN 196 (390)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC----CGGGCTTCSEEECCSS
T ss_pred EEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc----ccccccccceeecccc
Confidence 999999999955555679999999999999999988888899999999999999999863 3566777777777777
Q ss_pred CCCCCCCC--C---------------CCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCC
Q 003140 262 SLQGPMPD--L---------------SRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (845)
Q Consensus 262 ~l~~~~~~--l---------------~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (845)
.+++.... + ...++|+.|++++|.+++. +......+|+.|+|++|.+++..|..|..+++|+
T Consensus 197 ~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 197 LLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp CCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred cccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 76652110 0 1123455555555555422 2222223455555555555555555555555555
Q ss_pred eEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCcc
Q 003140 325 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 325 ~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~~~l~~l~l~~Np~ 384 (845)
+|+|++|++++ +|..+. ..++|+.|+|++|+|+.+|..+ .++.++.|++++|++
T Consensus 276 ~L~L~~n~l~~-~~~~~~-----~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 276 RLYISNNRLVA-LNLYGQ-----PIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp EEECCSSCCCE-EECSSS-----CCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCC
T ss_pred EEECCCCcCcc-cCcccC-----CCCCCCEEECCCCcceecCccccccCcCCEEECCCCcc
Confidence 55555555543 222221 1233445555555555555443 345555555555554
No 291
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=1.7e-28 Score=279.57 Aligned_cols=278 Identities=18% Similarity=0.156 Sum_probs=173.5
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+|++|.+++. + ++.+++|++|+|++|++++. | ++++++|++|+|++|++++ +| ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 3455666666665553 2 55566666666666666542 2 5556666666666666654 33 555666666666
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|++++. + +.++++|++|++++|+..+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee
Confidence 66666542 2 555666666666666444444 35566666666666666665 33 66666677777777776652
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCcc--------ccCEEEccCCcCCCCc
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--------NITTIKLSNNKLTGTI 313 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~--------~L~~L~Ls~N~l~~~~ 313 (845)
.++.+++|+.|++++|++++.+ +..+++|+.|++++|++++..+..+... +|+.|++++|.+.+.+
T Consensus 207 ----~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 207 ----DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYF 280 (457)
T ss_dssp ----CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred ----ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcc
Confidence 3666677777777777777643 6666777777777777765433222111 3455555555555555
Q ss_pred ccccCCCCCCCeEecccccCcccCChhhhhhccCC---CCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 003140 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN---ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (845)
Q Consensus 314 p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~---~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~ 385 (845)
| ++.+++|+.|++++|++.+.+|.....+..+. .++|+.|++++|+|++++ -..++.++.|++++|.+.
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELD-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCCC-CTTCTTCSEEECCSSCCC
T ss_pred c--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccccc-cccCCcCcEEECCCCCCC
Confidence 5 45677888888888888777776544444442 456889999999999874 235888999999999875
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=3.9e-29 Score=295.40 Aligned_cols=271 Identities=20% Similarity=0.216 Sum_probs=202.0
Q ss_pred CCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEE
Q 003140 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (845)
Q Consensus 104 ~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (845)
.+++++.|++++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|.++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 47889999999999997666678999999999999999998888899999999999999999999889999999999999
Q ss_pred EccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCC
Q 003140 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (845)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (845)
+|++|.|++..+..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++. .+..+++|+.|++++|.+
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC----CGGGCTTCSEEECCSSCC
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc----ChhhhhhhhhhhcccCcc
Confidence 9999999966666789999999999999999999998999999999999999999863 255667777777777776
Q ss_pred CCCCCC--C---------------CCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeE
Q 003140 264 QGPMPD--L---------------SRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 326 (845)
Q Consensus 264 ~~~~~~--l---------------~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 326 (845)
++.... + ...++|+.|+|++|.+++. +......+|+.|+|++|.+++.+|..|..+++|+.|
T Consensus 205 ~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 205 STLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp SEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred ccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 652110 0 0113555556666655532 222223356666666666666666666666666666
Q ss_pred ecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccc
Q 003140 327 FIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 327 ~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~~~l~~l~l~~Np~~ 385 (845)
+|++|++++ +|..+.. .+.|+.|+|++|+|+.+|..+ .++.+..|+|++|++.
T Consensus 284 ~Ls~N~l~~-l~~~~~~-----l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQP-----IPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp ECTTSCCCE-EECSSSC-----CTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCC
T ss_pred ECCCCCCCC-CCccccc-----CCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCC
Confidence 666666654 3333322 234556666666666666554 3566666666666653
No 293
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=8.1e-30 Score=298.51 Aligned_cols=171 Identities=14% Similarity=0.208 Sum_probs=147.4
Q ss_pred EEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccc
Q 003140 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYI 166 (845)
Q Consensus 87 L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 166 (845)
.++++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 678888888 5676664 7999999999999988899999999999999999999988889999999999999999999
Q ss_pred cCCCCccccCccCCCEEEccCCCCCC-CCccccCCCCCcceeeccccccccCCC-cccCCCCCCcEEEccCCcCCCCCCc
Q 003140 167 SGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIP 244 (845)
Q Consensus 167 ~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p 244 (845)
++..|..|+++++|++|+|++|++++ ..|..++.+++|++|++++|++.+.+| ..|..+++|++|++++|++++ ..|
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 165 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-YQS 165 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc-cCh
Confidence 98888889999999999999999986 457889999999999999999554554 689999999999999999987 567
Q ss_pred cccccCCCccEEEcccC
Q 003140 245 ASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 245 ~~~~~l~~L~~L~Ls~N 261 (845)
..+.++++|++|+++.|
T Consensus 166 ~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp TTTTTCSEEEEEEEECS
T ss_pred hhhhccccCceEecccC
Confidence 76665444443333333
No 294
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=1.4e-28 Score=281.82 Aligned_cols=278 Identities=25% Similarity=0.340 Sum_probs=154.6
Q ss_pred cceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceee
Q 003140 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (845)
Q Consensus 81 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (845)
..+++.|+|++|.+++..+ +..+++|++|+|++|.+++..+ +.++++|++|+|++|++++. +. +..+++|++|+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~ 140 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLE 140 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEE
Confidence 3578999999999887644 8999999999999999986544 89999999999999999854 33 88999999999
Q ss_pred cccccccCCCCccccCccCCCEEE---------------------ccCCCCCCCCccccCCCCCcceeeccccccccCCC
Q 003140 161 IDQNYISGSLPKSFANLNKTRHFH---------------------MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP 219 (845)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~---------------------L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 219 (845)
|++|.+++. + .+..+++|+.|+ +++|.+++. ..+..+++|++|++++|++++..|
T Consensus 141 l~~n~l~~~-~-~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 216 (466)
T 1o6v_A 141 LSSNTISDI-S-ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 216 (466)
T ss_dssp EEEEEECCC-G-GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCCCccCCC-h-hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc
Confidence 999998853 2 244454444444 444444422 124444444444444444443322
Q ss_pred cccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCcccc
Q 003140 220 PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNI 299 (845)
Q Consensus 220 ~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L 299 (845)
++.+++|++|++++|++++. ..+..+++|+.|++++|++++.++ +..+++|+.|++++|.+++..+ .....+|
T Consensus 217 --~~~l~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L 289 (466)
T 1o6v_A 217 --LGILTNLDELSLNGNQLKDI---GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTAL 289 (466)
T ss_dssp --GGGCTTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTC
T ss_pred --ccccCCCCEEECCCCCcccc---hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCcc
Confidence 33444444444444444321 234444445555555554444333 4444445555555554443222 2222344
Q ss_pred CEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEe
Q 003140 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRL 379 (845)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l 379 (845)
+.|+|++|++++..+ +..+++|+.|+|++|++++..| +.. .++|+.|++++|++++++.-..++.++.|++
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~-----l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS-----LTKLQRLFFYNNKVSDVSSLANLTNINWLSA 360 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG-----CTTCCEEECCSSCCCCCGGGTTCTTCCEEEC
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc-----CccCCEeECCCCccCCchhhccCCCCCEEeC
Confidence 555555555444332 4444555555555555544333 221 1233345555555444432223444445555
Q ss_pred cCCcc
Q 003140 380 RGNPF 384 (845)
Q Consensus 380 ~~Np~ 384 (845)
++|++
T Consensus 361 ~~n~l 365 (466)
T 1o6v_A 361 GHNQI 365 (466)
T ss_dssp CSSCC
T ss_pred CCCcc
Confidence 44443
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3e-29 Score=270.98 Aligned_cols=258 Identities=19% Similarity=0.211 Sum_probs=180.3
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCC--CCccccCccCCCEEEcc
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS--LPKSFANLNKTRHFHMN 186 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~ 186 (845)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46788888887 5676553 5888899999998854445578888999999998888733 36667778888888888
Q ss_pred CCCCCCCCccccCCCCCcceeeccccccccCCC-cccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCC
Q 003140 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (845)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (845)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++ ..+..+.++++|++|+|++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccCcCCCEEECCCCcccc
Confidence 88887 466677788888888888888876554 467777788888888887775 456667777777777777777765
Q ss_pred --CCCCCCCCCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhh
Q 003140 266 --PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (845)
Q Consensus 266 --~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~ 342 (845)
.+..+..+++|+.|++++|.+++..|..+.. .+|+.|+|++|++++..+..+..+++|++|+|++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 3344666667777777766666544443322 3555555555555555554555555555555555555544443322
Q ss_pred hhccCCCCcceEEEccCCCCCCCCCCCCC-CCCcEEEecCCcccccCCCccccCCCC
Q 003140 343 QSRTLNATETFILDFQNNNLTNISGSFNI-PPNVTVRLRGNPFCLNTNAEQFCGSHS 398 (845)
Q Consensus 343 ~l~~l~~~~l~~L~ls~N~l~~i~~~~~~-~~l~~l~l~~Np~~c~~~~~~~~~~~~ 398 (845)
.+ +.++.|++++|||.|+|...+|-.|..
T Consensus 245 ---------------------------~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~ 274 (306)
T 2z66_A 245 ---------------------------HFPSSLAFLNLTQNDFACTCEHQSFLQWIK 274 (306)
T ss_dssp ---------------------------CCCTTCCEEECTTCCEECSGGGHHHHHHHH
T ss_pred ---------------------------hhhccCCEEEccCCCeecccChHHHHHHHH
Confidence 24 378899999999999999988887763
No 296
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=2.6e-28 Score=279.67 Aligned_cols=281 Identities=27% Similarity=0.364 Sum_probs=239.2
Q ss_pred cceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCC-------------
Q 003140 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP------------- 147 (845)
Q Consensus 81 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p------------- 147 (845)
..+++.|++++|.+++..+ ++.+++|++|+|++|.+++. +. +.++++|++|+|++|++++. +
T Consensus 89 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l 163 (466)
T 1o6v_A 89 LTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSF 163 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-GGGTTCTTCSEEEE
T ss_pred cccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-hhhccCCcccEeec
Confidence 4678999999999987654 89999999999999999864 43 88899999999999988742 2
Q ss_pred -------CccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCc
Q 003140 148 -------EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (845)
Q Consensus 148 -------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 220 (845)
..+.++++|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|++++. .
T Consensus 164 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 237 (466)
T 1o6v_A 164 GNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--G 237 (466)
T ss_dssp EESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred CCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--h
Confidence 1266788899999999999854 358899999999999999997655 78899999999999999964 4
Q ss_pred ccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccC
Q 003140 221 ELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNIT 300 (845)
Q Consensus 221 ~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~ 300 (845)
.+..+++|+.|++++|.+++. .+ +..+++|+.|++++|++++.++ +..+++|+.|++++|++++..+ .....+|+
T Consensus 238 ~l~~l~~L~~L~l~~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~ 312 (466)
T 1o6v_A 238 TLASLTNLTDLDLANNQISNL-AP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP-ISNLKNLT 312 (466)
T ss_dssp GGGGCTTCSEEECCSSCCCCC-GG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCS
T ss_pred hhhcCCCCCEEECCCCccccc-hh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCC
Confidence 688999999999999999863 32 8999999999999999998776 8899999999999999996544 44455899
Q ss_pred EEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEec
Q 003140 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLR 380 (845)
Q Consensus 301 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~ 380 (845)
.|+|++|++++..| +..+++|++|++++|++++. ..+.. .++|+.|++++|+++++++...++.+..|+++
T Consensus 313 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~-----l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~ 383 (466)
T 1o6v_A 313 YLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLAN-----LTNINWLSAGHNQISDLTPLANLTRITQLGLN 383 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTT-----CTTCCEEECCSSCCCBCGGGTTCTTCCEEECC
T ss_pred EEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhcc-----CCCCCEEeCCCCccCccchhhcCCCCCEEecc
Confidence 99999999998876 78999999999999999965 34444 35667999999999988875579999999999
Q ss_pred CCcccc
Q 003140 381 GNPFCL 386 (845)
Q Consensus 381 ~Np~~c 386 (845)
+|+|..
T Consensus 384 ~n~~~~ 389 (466)
T 1o6v_A 384 DQAWTN 389 (466)
T ss_dssp CEEEEC
T ss_pred CCcccC
Confidence 999875
No 297
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.8e-30 Score=281.28 Aligned_cols=244 Identities=23% Similarity=0.262 Sum_probs=151.9
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCC-CCCCccccc-------ccccchhhhccCCCCCCCCCCcc--CC
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI-SGSIPKEIG-------NIKSLELLLLNGNELTGSLPEEL--GY 152 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~ 152 (845)
+++.|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+ ..
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 455666666666 555555443 66667777766 345555554 56677777777777766666665 66
Q ss_pred CCccceeecccccccCCCCccccCc-----cCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccC--CCccc--C
Q 003140 153 LPKLDRIQIDQNYISGSLPKSFANL-----NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--LPPEL--S 223 (845)
Q Consensus 153 l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~l--~ 223 (845)
+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..++.+++|++|+|++|++.+. .+..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 67777777777777655 6666655 6677777777777666666666777777777777766543 22233 5
Q ss_pred CCCCCcEEEccCCcCCCC-CCc-cccccCCCccEEEcccCCCCCCCC--CCCCCCCccEEEcccccCCcCCCCCCCcccc
Q 003140 224 ELPKLLILQLDNNNFEGT-TIP-ASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNI 299 (845)
Q Consensus 224 ~l~~L~~L~Ls~N~l~~~-~~p-~~~~~l~~L~~L~Ls~N~l~~~~~--~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L 299 (845)
.+++|++|+|++|++++. .++ ..+.++++|+.|+|++|++++.++ .+..+++|+.|+|++|.|+ .+|.... .+|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCc
Confidence 666777777777766531 011 233456667777777777666542 3455666677777777666 5555544 566
Q ss_pred CEEEccCCcCCCCcccccCCCCCCCeEecccccCcc
Q 003140 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (845)
+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6666666666655 44 6666666666666666653
No 298
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=8.1e-28 Score=264.46 Aligned_cols=281 Identities=20% Similarity=0.292 Sum_probs=240.2
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|++.++.+... + .+..+++|++|+|++|++++ ++. +.++++|++|+|++|.+++ +| .+..+++|++|+|
T Consensus 44 ~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l 117 (347)
T 4fmz_A 44 ESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYL 117 (347)
T ss_dssp TTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEEC
T ss_pred ccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEEC
Confidence 4689999999999853 3 59999999999999999995 444 9999999999999999995 44 6999999999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|.+++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|++++
T Consensus 118 ~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~- 191 (347)
T 4fmz_A 118 NEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED- 191 (347)
T ss_dssp TTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-
T ss_pred cCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-
Confidence 9999996544 8999999999999997765544 48999999999999999986543 8899999999999999985
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++. +......+|+.|++++|.+++. ..+..++
T Consensus 192 -~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~ 265 (347)
T 4fmz_A 192 -ISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDL-SPLANLSQLTWLEIGTNQISDI--NAVKDLT 265 (347)
T ss_dssp -CGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred -ccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCC-cchhcCCCCCEEECCCCccCCC--hhHhcCC
Confidence 333 8899999999999999998766 88899999999999999954 4444556999999999999975 5789999
Q ss_pred CCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCccccc
Q 003140 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLN 387 (845)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~Np~~c~ 387 (845)
+|++|++++|++++. | .+..+ ++|+.|++++|+++.++.. + .++.++.|++++|++...
T Consensus 266 ~L~~L~l~~n~l~~~-~-~~~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 266 KLKMLNVGSNQISDI-S-VLNNL-----SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp TCCEEECCSSCCCCC-G-GGGGC-----TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CcCEEEccCCccCCC-h-hhcCC-----CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 999999999999964 3 34443 4567999999999977654 3 689999999999998754
No 299
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.1e-29 Score=265.64 Aligned_cols=254 Identities=17% Similarity=0.193 Sum_probs=158.0
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
+.+++++++++. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 345555555552 34332 356677777777776655566666677777777777766665666667777777777777
Q ss_pred c-ccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCC
Q 003140 165 Y-ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (845)
Q Consensus 165 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (845)
. ++...|..+..+++|++|++++|++++..|..+..+++|++|++++|++++..+..|..+++|++|+|++|++++ ..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-EC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cC
Confidence 5 655556666667777777777777766666666667777777777777765555556666777777777776664 23
Q ss_pred ccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCC-CccccCEEEccCCcCCCCcccccCCCC
Q 003140 244 PASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
+..+.++++|+.|+|++|++++..+ .+..+++|+.|++++|.+++..+..+ ...+|+.|+|++|.+....+.. .-+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 3456666777777777777766543 46666777777777777764333322 2336777777777666433221 1112
Q ss_pred CCCeEecccccCcccCChhhhh
Q 003140 322 RLQRLFIANNSLSGSIPSSIWQ 343 (845)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~l~~ 343 (845)
.|+.+..+.|.+....|..+..
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp HHHHCCSEECCCBEEESGGGTT
T ss_pred HHHhcccccCccccCCchHhCC
Confidence 3445556677777777776543
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.3e-28 Score=265.30 Aligned_cols=233 Identities=21% Similarity=0.330 Sum_probs=176.4
Q ss_pred CCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEE
Q 003140 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (845)
Q Consensus 105 L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (845)
.++++.|+|++|+++ .+|..+.++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 477888888888888 77777888888888888888888 78888888888888888888887 6677777777777777
Q ss_pred ccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCC
Q 003140 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (845)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 264 (845)
|++|++.+.+|..+... ..+..|..+++|++|+|++|+++ .+|..+.++++|++|+|++|+++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCCC
Confidence 77777776666554421 11233556777888888888776 46777777777777777777777
Q ss_pred CCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhh
Q 003140 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 344 (845)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l 344 (845)
+.++.+..+++|+.|+++ +|++.+.+|..|.++++|++|+|++|++.+.+|..+..+
T Consensus 220 ~l~~~l~~l~~L~~L~Ls-----------------------~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l 276 (328)
T 4fcg_A 220 ALGPAIHHLPKLEELDLR-----------------------GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRL 276 (328)
T ss_dssp CCCGGGGGCTTCCEEECT-----------------------TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGC
T ss_pred cCchhhccCCCCCEEECc-----------------------CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcC
Confidence 665555555555555555 455555667788899999999999999999999998776
Q ss_pred ccCCCCcceEEEccCCCC-CCCCCCC-CCCCCcEEEecCCccc
Q 003140 345 RTLNATETFILDFQNNNL-TNISGSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 345 ~~l~~~~l~~L~ls~N~l-~~i~~~~-~~~~l~~l~l~~Np~~ 385 (845)
.. |+.|+|++|++ ..+|..+ .++.+..+++..|.+.
T Consensus 277 ~~-----L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 277 TQ-----LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TT-----CCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CC-----CCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 55 55999999876 5677776 6999999999877653
No 301
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=5.2e-28 Score=284.37 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=116.9
Q ss_pred cCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCC-cCCCCCCC-ccc
Q 003140 222 LSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLN-GSIPPGRL-SLN 298 (845)
Q Consensus 222 l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~-~~ip~~~~-~~~ 298 (845)
+..+++|++|++++|.+++......+.++++|+.|++++|.+++..+ .+..+++|+.|++++|.++ +.+|..+. ..+
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 55667777777777777753233578999999999999999998766 4889999999999999998 56776654 348
Q ss_pred cCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCC
Q 003140 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (845)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i 365 (845)
|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..+. +|+.|++++|.++.-
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-----~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLT-----SLQKIWLHTNPWDCS 533 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT-----TCCEEECCSSCBCCC
T ss_pred CCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhccc-----CCcEEEecCCcccCC
Confidence 99999999999999999999999999999999999988777776554 456999999999854
No 302
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=272.16 Aligned_cols=243 Identities=21% Similarity=0.254 Sum_probs=194.7
Q ss_pred EEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccc
Q 003140 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYI 166 (845)
Q Consensus 87 L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 166 (845)
++..+.+|+ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 333444555 4555554 6788888888888877778888888888888888888877778888888888888888888
Q ss_pred cCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccc-ccccCCCcccCCCCCCcEEEccCCcCCCCCCcc
Q 003140 167 SGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN-NLTGYLPPELSELPKLLILQLDNNNFEGTTIPA 245 (845)
Q Consensus 167 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~ 245 (845)
++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++| .+....+..|..+++|++|+|++|+++. +|
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--~~- 201 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE--IP- 201 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS--CC-
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc--cc-
Confidence 8766777888888888888888888666678888888888888884 4444444568888899999999998874 44
Q ss_pred ccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCCCCCC
Q 003140 246 SYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRL 323 (845)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L 323 (845)
.+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|++++..+..+.. .+|+.|+|++|+|++..+..|..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 47888899999999999988755 5888899999999999998766655443 488999999999988888888999999
Q ss_pred CeEecccccCcc
Q 003140 324 QRLFIANNSLSG 335 (845)
Q Consensus 324 ~~L~L~~N~l~~ 335 (845)
+.|+|++|.+..
T Consensus 282 ~~L~L~~Np~~C 293 (440)
T 3zyj_A 282 ERIHLHHNPWNC 293 (440)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEcCCCCccC
Confidence 999999999863
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=2.3e-27 Score=282.22 Aligned_cols=176 Identities=18% Similarity=0.207 Sum_probs=141.6
Q ss_pred CCCCCCCCCCCCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCccccccccc
Q 003140 52 SKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKS 131 (845)
Q Consensus 52 ~~l~~W~~~~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~ 131 (845)
..+++|+..-|.+ |....|... -...+.++.+|+ .+|..+. +++++|||++|+|++..|.+|.++++
T Consensus 11 ~~~~~~~~~~p~~--~~~c~~~~~--------~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~ 77 (635)
T 4g8a_A 11 DKLAAANSSIPES--WEPCVEVVP--------NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPE 77 (635)
T ss_dssp ----------------CCSEEEET--------TTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred chhhcccCCCCCC--CCCccccCC--------CCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCC
Confidence 3466776655543 666555432 134578888888 5676654 57999999999999877889999999
Q ss_pred chhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccc
Q 003140 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (845)
Q Consensus 132 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (845)
|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++
T Consensus 78 L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 157 (635)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecccc
Confidence 99999999999987788999999999999999999987788999999999999999999987777899999999999999
Q ss_pred ccccc-CCCcccCCCCCCcEEEccCCcCCC
Q 003140 212 NNLTG-YLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 212 N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
|++++ .+|..+..+++|++|+|++|++++
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CccccCCCchhhccchhhhhhcccCccccc
Confidence 99986 467888999999999999998865
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=8.3e-28 Score=273.69 Aligned_cols=268 Identities=25% Similarity=0.337 Sum_probs=206.5
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccc-------------hhhhccCCCCCCCCCC
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL-------------ELLLLNGNELTGSLPE 148 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 148 (845)
.+++.|+++++++ |.+|++|++|++|++|+|++|+++|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4789999999999 8999999999999999999999999999999999876 899999999995 555
Q ss_pred ccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCC
Q 003140 149 ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL 228 (845)
Q Consensus 149 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 228 (845)
. .++|++|+|++|++++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .++.+++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 3789999999999997 6654 4889999999999985 3322 2699999999999996 67 69999999
Q ss_pred cEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCc
Q 003140 229 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (845)
Q Consensus 229 ~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~ 308 (845)
++|++++|++++ +|..+ .+|++|++++|++++.+ .+..+++|+.|++++|++++ +|... .+|+.|++++|+
T Consensus 156 ~~L~l~~N~l~~--lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~ 226 (454)
T 1jl5_A 156 KIIDVDNNSLKK--LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNI 226 (454)
T ss_dssp CEEECCSSCCSC--CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSC
T ss_pred CEEECCCCcCcc--cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCc
Confidence 999999999985 55543 58999999999999854 79999999999999999995 55533 489999999999
Q ss_pred CCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccc
Q 003140 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 386 (845)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c 386 (845)
++ .+| .++.+++|++|++++|++++ +|.. ..+|+.|++++|+++++|.. .+.++.+++++|.+..
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--------~~~L~~L~l~~N~l~~l~~~--~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--------PPSLEALNVRDNYLTDLPEL--PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--------CTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSE
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--------ccccCEEECCCCcccccCcc--cCcCCEEECcCCccCc
Confidence 99 667 49999999999999999985 5543 24677899999999888764 3778888888887654
No 305
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6e-28 Score=283.37 Aligned_cols=285 Identities=26% Similarity=0.329 Sum_probs=231.2
Q ss_pred CCCCCCCCCCCCCCcceEecCCCCCC-CcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccc
Q 003140 54 LSNWNRGDPCTSNWTGVLCFNTTMDD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (845)
Q Consensus 54 l~~W~~~~~c~~~w~Gv~C~~~~~~~-~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L 132 (845)
++.|....+|| .|.|..|....... ....++.|++++++|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|
T Consensus 12 w~~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 45687666665 68764321100000 0124889999999999 7787776 89999999999999 5675 57899
Q ss_pred hhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccc
Q 003140 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (845)
Q Consensus 133 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 212 (845)
++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|++ +|.. +++|++|+|++|
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 99999999999 5676 77999999999999995 444 67899999999999995 5653 489999999999
Q ss_pred ccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCC
Q 003140 213 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292 (845)
Q Consensus 213 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~ 292 (845)
++++ +|. .+++|+.|++++|++++ +| ..+++|+.|+|++|++++.+.. +++|+.|++++|.++ .+|.
T Consensus 152 ~l~~-l~~---~~~~L~~L~L~~N~l~~--l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~ 218 (622)
T 3g06_A 152 QLAS-LPA---LPSELCKLWAYNNQLTS--LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA 218 (622)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred cCCC-cCC---ccCCCCEEECCCCCCCC--Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC
Confidence 9995 443 35789999999999985 55 5578999999999999986653 479999999999999 5665
Q ss_pred CCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CC
Q 003140 293 GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NI 371 (845)
Q Consensus 293 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~ 371 (845)
. ..+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. ..++|+.|+|++|+|+.+|..+ .+
T Consensus 219 ~--~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~--------~~~~L~~L~Ls~N~L~~lp~~l~~l 283 (622)
T 3g06_A 219 L--PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM--------LPSGLLSLSVYRNQLTRLPESLIHL 283 (622)
T ss_dssp C--CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC--------CCTTCCEEECCSSCCCSCCGGGGGS
T ss_pred C--CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc--------ccccCcEEeCCCCCCCcCCHHHhhc
Confidence 3 3589999999999996 55 56789999999999999 5665 2356789999999999999876 59
Q ss_pred CCCcEEEecCCcccc
Q 003140 372 PPNVTVRLRGNPFCL 386 (845)
Q Consensus 372 ~~l~~l~l~~Np~~c 386 (845)
+.+..|+|++|++..
T Consensus 284 ~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 284 SSETTVNLEGNPLSE 298 (622)
T ss_dssp CTTCEEECCSCCCCH
T ss_pred cccCEEEecCCCCCC
Confidence 999999999999874
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.1e-27 Score=269.67 Aligned_cols=246 Identities=20% Similarity=0.240 Sum_probs=217.7
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
..++..+.+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788888888 4666554 68999999999999988999999999999999999999888899999999999999999
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccc-cccccCCCcccCCCCCCcEEEccCCcCCCCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (845)
+|++..+..|.++++|++|+|++|+++...+..|..+++|++|+|++ |.+....+..|..+++|++|+|++|++++ +
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--~ 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--M 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS--C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc--c
Confidence 99988888899999999999999999977777899999999999999 45554445579999999999999999985 3
Q ss_pred ccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCCc-cccCEEEccCCcCCCCcccccCCCC
Q 003140 244 PASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
| .+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|++++..+..+.. .+|+.|+|++|+|++..+..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 3 58899999999999999999766 4899999999999999999777765543 4899999999999988888889999
Q ss_pred CCCeEecccccCccc
Q 003140 322 RLQRLFIANNSLSGS 336 (845)
Q Consensus 322 ~L~~L~L~~N~l~~~ 336 (845)
+|+.|+|++|.+...
T Consensus 291 ~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 291 YLVELHLHHNPWNCD 305 (452)
T ss_dssp TCCEEECCSSCEECS
T ss_pred CCCEEEccCCCcCCC
Confidence 999999999988743
No 307
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.95 E-value=2.9e-26 Score=260.94 Aligned_cols=264 Identities=27% Similarity=0.316 Sum_probs=136.9
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|++++|.+++ +|.. +++|++|+|++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 356666776666665 4432 2556666666666553 2211 1456666666666663 45 3666666666666
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|++++ +|..+ .+|++|++++|++++ +| .++.+++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-- 228 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-- 228 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS--
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC--
Confidence 6666653 34322 356666666666654 34 35556666666666666553 23221 35556666666554
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCC--cccc---
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGT--IPSN--- 316 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~--~p~~--- 316 (845)
.+| .+..+++|++|++++|++++.+.. +++|+.|++++|++++ +|... .+|+.|++++|++++. +|..
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ls~N~l~~l~~~~~~L~~ 301 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDVSENIFSGLSELPPNLYY 301 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSEESCCCTTCCE
T ss_pred ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCccc--CcCCEEECcCCccCcccCcCCcCCE
Confidence 234 255555666666666655553321 2455555555555553 33321 3455555555555441 1100
Q ss_pred ----------cCCC-CCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 003140 317 ----------FSGL-PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (845)
Q Consensus 317 ----------~~~l-~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~ 385 (845)
+..+ ++|++|++++|++++ +|.. .+.|+.|++++|+++.+|. .++.++.|++++|++.
T Consensus 302 L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~--------~~~L~~L~L~~N~l~~lp~--~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 302 LNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL--------PPRLERLIASFNHLAEVPE--LPQNLKQLHVEYNPLR 370 (454)
T ss_dssp EECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC--------CTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCS
T ss_pred EECcCCcCCcccCCcCcCCEEECCCCcccc-cccc--------CCcCCEEECCCCccccccc--hhhhccEEECCCCCCC
Confidence 1112 355555555555553 4432 1344566666666666555 3455666666666554
No 308
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=7.4e-27 Score=266.08 Aligned_cols=274 Identities=21% Similarity=0.177 Sum_probs=228.9
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+++++.+++. | .++.+++|++|+|++|++++. | ++++++|++|+|++|++++. | ++.+++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 4789999999999975 4 799999999999999999974 4 89999999999999999964 4 899999999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|++++ +| +..+++|++|++++|++++. + ++.+++|++|++++|+..+.+ .+..+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 9999997 44 89999999999999999974 3 889999999999999766666 58899999999999999986
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
+| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| .....+|+.|++++|++++..+..+..+.
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L~ 257 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELDVSTLSKLT 257 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCCCTTCTTCC
T ss_pred -ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcCHHHCCCCC
Confidence 34 88999999999999999987 48899999999999999996 66 44456899999999999988766666655
Q ss_pred -------CCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCC-CCCCCC--------C-CCCCCcEEEecCCcc
Q 003140 322 -------RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNL-TNISGS--------F-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 322 -------~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l-~~i~~~--------~-~~~~l~~l~l~~Np~ 384 (845)
+|+.|++++|++.|.+|. . ..++|+.|++++|.+ ..+|.. + ..+.++.|++++|.+
T Consensus 258 ~L~l~~n~L~~L~l~~n~~~~~~~~--~-----~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l 330 (457)
T 3bz5_A 258 TLHCIQTDLLEIDLTHNTQLIYFQA--E-----GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTEL 330 (457)
T ss_dssp EEECTTCCCSCCCCTTCTTCCEEEC--T-----TCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCC
T ss_pred EEeccCCCCCEEECCCCccCCcccc--c-----ccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcc
Confidence 567777777877777763 2 235667888998864 223321 2 367788888888887
Q ss_pred cc
Q 003140 385 CL 386 (845)
Q Consensus 385 ~c 386 (845)
..
T Consensus 331 ~~ 332 (457)
T 3bz5_A 331 TE 332 (457)
T ss_dssp SC
T ss_pred cc
Confidence 54
No 309
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=8.3e-29 Score=288.82 Aligned_cols=185 Identities=18% Similarity=0.115 Sum_probs=129.8
Q ss_pred cccccCceEEEEEE-eCCCcEEEEEEccCCC----------hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCeEEEE
Q 003140 631 QIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS----------LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 631 ~LG~G~fG~Vy~~~-~~~g~~vAVK~~~~~~----------~~~~~~~~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 698 (845)
..+.|++|.+..++ .--|+.+|||.+.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777666554 3358899999986431 12346799999999999 799999999999999999999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||++||+|.++|...+ +++.. +|+.||+.||+|+|+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999997643 45543 48899999999999999 999999999999999999999999999876432
Q ss_pred CCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 831 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~P 831 (845)
........||++|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 393 -------~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 -------CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -------CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 122345679999999999865 567789999999998877665443
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4.9e-27 Score=250.85 Aligned_cols=235 Identities=17% Similarity=0.267 Sum_probs=154.0
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
++++.+++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67788888887 556544 357888888888887666667777778888888887777666777777777777777777
Q ss_pred C-CCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC
Q 003140 189 S-ISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (845)
Q Consensus 189 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (845)
. +....|..+..+++|++|++++|++++..+..+..+++|++|+|++|++++ ..+..|.++++|+.|+|++|++++.+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc-cCHhHhccCCCccEEECCCCcccccC
Confidence 6 665556666667777777777777666556666666666666666666654 23334555555555555555555443
Q ss_pred CC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhcc
Q 003140 268 PD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (845)
Q Consensus 268 ~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~ 346 (845)
+. +..+++ |+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..
T Consensus 170 ~~~~~~l~~-----------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--- 223 (285)
T 1ozn_A 170 ERAFRGLHS-----------------------LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP--- 223 (285)
T ss_dssp TTTTTTCTT-----------------------CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT---
T ss_pred HHHhcCccc-----------------------cCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHccc---
Confidence 32 334444 444444444444455666667777777777777777544443432
Q ss_pred CCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCCccccCCC
Q 003140 347 LNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 347 l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
++.++.|++++|||.|+|...++..|.
T Consensus 224 ------------------------l~~L~~L~l~~N~~~c~~~~~~~~~~l 250 (285)
T 1ozn_A 224 ------------------------LRALQYLRLNDNPWVCDCRARPLWAWL 250 (285)
T ss_dssp ------------------------CTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred ------------------------CcccCEEeccCCCccCCCCcHHHHHHH
Confidence 456678888899999999887776554
No 311
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.8e-28 Score=266.40 Aligned_cols=273 Identities=18% Similarity=0.172 Sum_probs=217.5
Q ss_pred CCCCCcceEecCC--C---CC-CCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhh
Q 003140 63 CTSNWTGVLCFNT--T---MD-DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (845)
Q Consensus 63 c~~~w~Gv~C~~~--~---~~-~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (845)
|.|.|.|+ |... . .+ ....+++.|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 44468887 5422 1 11 2235899999999999987777999999999999999999988888999999999999
Q ss_pred ccCCCCCCCCCCccCCCCccceeecccccccCCCC-ccccCccCCCEEEccCCC-CCCCCccccCCCCCcceeecccccc
Q 003140 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRHFHMNNNS-ISGQIPPELSRLPSLVHMLLDNNNL 214 (845)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l 214 (845)
|++|++++..+..|.++++|++|+|++|++++..+ ..+.++++|++|++++|+ +....+..+..+++|++|++++|++
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 99999996555559999999999999999995544 489999999999999994 7766678899999999999999999
Q ss_pred ccCCCcccCCCCCCcEEEccCCcCCCCCCcc-ccccCCCccEEEcccCCCCCCCCC----CCCCCCccEEEcccccCCcC
Q 003140 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPA-SYSNMSKLLKLSLRNCSLQGPMPD----LSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~----l~~l~~L~~L~Ls~N~l~~~ 289 (845)
++..|..+..+++|++|++++|+++. +|. .+..+++|+.|++++|++++.... ......++.+++++|.+++.
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~--~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHIL--LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTT--HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred CccCHHHHhccccCCeecCCCCcccc--chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 99999999999999999999999974 444 456689999999999999986543 33456778888888877642
Q ss_pred ----CCCCC-CccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCC
Q 003140 290 ----IPPGR-LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIP 338 (845)
Q Consensus 290 ----ip~~~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 338 (845)
+|..+ ...+|+.|+|++|+|+...+..|..+++|++|+|++|++++..|
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 33322 22367777777777774333335777777777777777776554
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=8.3e-29 Score=268.28 Aligned_cols=226 Identities=19% Similarity=0.251 Sum_probs=148.3
Q ss_pred ccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCC-CCCCCCccC-------CCCccceeecccccccCCCCcc
Q 003140 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL-TGSLPEELG-------YLPKLDRIQIDQNYISGSLPKS 173 (845)
Q Consensus 102 l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~ 173 (845)
++..++|+.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566778888888888 677766654 88888888887 345666555 6788888888888888777776
Q ss_pred c--cCccCCCEEEccCCCCCCCCccccCCC-----CCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC-CCcc
Q 003140 174 F--ANLNKTRHFHMNNNSISGQIPPELSRL-----PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPA 245 (845)
Q Consensus 174 ~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~p~ 245 (845)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. ..+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7788888888888888766 6666666 7788888888888777777777788888888888876541 1233
Q ss_pred cc--ccCCCccEEEcccCCCCCCCC---C-CCCCCCccEEEcccccCCcCCCCCCC--ccccCEEEccCCcCCCCccccc
Q 003140 246 SY--SNMSKLLKLSLRNCSLQGPMP---D-LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNF 317 (845)
Q Consensus 246 ~~--~~l~~L~~L~Ls~N~l~~~~~---~-l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls~N~l~~~~p~~~ 317 (845)
.+ .++++|++|+|++|++++.+. . +..+++|+.|++++|++++.+|.... ..+|+.|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 33 667777777777777764221 1 34556666666666666655432211 234555555555555 344433
Q ss_pred CCCCCCCeEecccccCcc
Q 003140 318 SGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~ 335 (845)
. ++|++|+|++|+|++
T Consensus 273 ~--~~L~~L~Ls~N~l~~ 288 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDR 288 (312)
T ss_dssp C--SEEEEEECCSSCCCS
T ss_pred c--CCceEEECCCCCCCC
Confidence 3 445555555555543
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.7e-28 Score=279.25 Aligned_cols=230 Identities=24% Similarity=0.214 Sum_probs=190.0
Q ss_pred ccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCC
Q 003140 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (845)
Q Consensus 102 l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (845)
...+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~ 102 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIE 102 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcC
Confidence 3344589999999999998888899999999999999999987665 8999999999999999985432 38999
Q ss_pred EEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccc-cCCCccEEEccc
Q 003140 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS-NMSKLLKLSLRN 260 (845)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-~l~~L~~L~Ls~ 260 (845)
.|++++|.|++..+. .+++|+.|+|++|++++..|..++.+++|++|+|++|.+++ ..|..+. .+++|+.|+|++
T Consensus 103 ~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 103 TLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-VNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp EEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-EEGGGGGGGTTTCCEEECTT
T ss_pred EEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-cChHHHhhhCCcccEEecCC
Confidence 999999999866543 45789999999999998888889999999999999999987 4666665 789999999999
Q ss_pred CCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCc-ccCCh
Q 003140 261 CSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS-GSIPS 339 (845)
Q Consensus 261 N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~ip~ 339 (845)
|.+++.++ +..+++|+.|+|++|.|++..|......+|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|.
T Consensus 179 N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 179 NFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp SCCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred Cccccccc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 99988744 446889999999999998765554444589999999999985 6777888899999999999887 56666
Q ss_pred hhhhh
Q 003140 340 SIWQS 344 (845)
Q Consensus 340 ~l~~l 344 (845)
.+..+
T Consensus 257 ~~~~l 261 (487)
T 3oja_A 257 FFSKN 261 (487)
T ss_dssp HHTTC
T ss_pred HHHhC
Confidence 55443
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=8e-28 Score=261.12 Aligned_cols=258 Identities=22% Similarity=0.204 Sum_probs=209.1
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
++..++++++++...+...+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45666777777776555566778899999999999998888899999999999999999986554 8999999999999
Q ss_pred cccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCC
Q 003140 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (845)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 242 (845)
+|++++.. ..++|++|++++|++++..+. .+++|++|++++|++++..+..+..+++|++|+|++|++++ .
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ 159 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-V 159 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE-E
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc-c
Confidence 99998433 348999999999999865443 36789999999999998878888899999999999999986 3
Q ss_pred Ccccc-ccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 243 IPASY-SNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 243 ~p~~~-~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
.+..+ ..+++|++|+|++|++++.+ ....+++|+.|++++|++++..+......+|+.|+|++|+|+ .+|..+..++
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 45555 57899999999999998874 344588999999999999965454334458999999999998 5688889999
Q ss_pred CCCeEecccccCc-ccCChhhhhhccCCCCcceEEEcc
Q 003140 322 RLQRLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQ 358 (845)
Q Consensus 322 ~L~~L~L~~N~l~-~~ip~~l~~l~~l~~~~l~~L~ls 358 (845)
+|+.|+|++|+++ +.+|..+..+.. |+.|+++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~-----L~~l~l~ 270 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQR-----VQTVAKQ 270 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHH-----HHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhcccc-----ceEEECC
Confidence 9999999999998 666776665443 3355555
No 315
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=7.4e-26 Score=240.48 Aligned_cols=228 Identities=20% Similarity=0.252 Sum_probs=147.0
Q ss_pred EEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccc
Q 003140 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYI 166 (845)
Q Consensus 87 L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 166 (845)
++..+.++. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 455555555 3454443 4677777777777766666777777777777777777765566677777777777777777
Q ss_pred cCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccC-CCcccCCCCCCcEEEccCCcCCCCCCcc
Q 003140 167 SGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIPA 245 (845)
Q Consensus 167 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~~p~ 245 (845)
++..+..|.++++|++|++++|++++..+..+..+++|++|++++|++++. +|..+..+++|++|+|++|++++ ..+.
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~-~~~~ 167 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS-IYCT 167 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE-ECGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc-CCHH
Confidence 766666666667777777766666655554566666666666666666542 35555555555555555555554 2333
Q ss_pred ccccCCCccEEEcccCCCCCCCCCCCCCCCcc-EEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCC
Q 003140 246 SYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLG-YLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (845)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~-~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (845)
.+..+++|+ .|. .|++++|.+++..+..+...+|+.|+|++|++++..+..|..+++|+
T Consensus 168 ~~~~l~~L~--------------------~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 227 (276)
T 2z62_A 168 DLRVLHQMP--------------------LLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQ 227 (276)
T ss_dssp GGHHHHTCT--------------------TCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCC
T ss_pred Hhhhhhhcc--------------------ccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhccccccc
Confidence 444443333 222 56666666664444444444677777777777766667788899999
Q ss_pred eEecccccCcccCC
Q 003140 325 RLFIANNSLSGSIP 338 (845)
Q Consensus 325 ~L~L~~N~l~~~ip 338 (845)
.|+|++|++++..|
T Consensus 228 ~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 228 KIWLHTNPWDCSCP 241 (276)
T ss_dssp EEECCSSCBCCCTT
T ss_pred EEEccCCcccccCC
Confidence 99999999997665
No 316
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.7e-25 Score=235.39 Aligned_cols=213 Identities=21% Similarity=0.272 Sum_probs=173.6
Q ss_pred CCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCC
Q 003140 66 NWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGS 145 (845)
Q Consensus 66 ~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (845)
.|.|+.|.... ..+.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++..
T Consensus 6 ~~~~~~C~c~~------~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 6 KKDGGVCSCNN------NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp GGGTCSBEEET------TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CCCCCCCEeCC------CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 59999985431 35679999999984 666554 6799999999999977777899999999999999999866
Q ss_pred CCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCC
Q 003140 146 LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 225 (845)
Q Consensus 146 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 225 (845)
.+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 66667889999999999999987777788888999999999999987777778888889999999888887666668888
Q ss_pred CCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCc
Q 003140 226 PKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG 288 (845)
Q Consensus 226 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~ 288 (845)
++|++|+|++|++++ ..+..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|.+..
T Consensus 157 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 157 TSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 888888888888876 4555678888888888888888877664 6777788888888887764
No 317
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.2e-25 Score=238.42 Aligned_cols=218 Identities=22% Similarity=0.253 Sum_probs=131.2
Q ss_pred cCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCc
Q 003140 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (845)
Q Consensus 150 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 229 (845)
+.++++|+++++++|.++ .+|..+. ++|+.|+|++|.+++..+..+..+++|++|+|++|++++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 455666777777777776 4444433 466666666666665555666666666666666666664322 24556666
Q ss_pred EEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCc
Q 003140 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (845)
Q Consensus 230 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~ 308 (845)
+|+|++|+++ .+|..+..+++|+.|+|++|++++.++. |..+++|+.|+|++|+++
T Consensus 81 ~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~--------------------- 137 (290)
T 1p9a_G 81 TLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK--------------------- 137 (290)
T ss_dssp EEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC---------------------
T ss_pred EEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCC---------------------
Confidence 6666666665 3455555555666666666655555442 555555555555555554
Q ss_pred CCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccccc
Q 003140 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 387 (845)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-~~~~l~~l~l~~Np~~c~ 387 (845)
+..+..|..+++|+.|+|++|+|++..+..+..+ ++|+.|+|++|+|+.+|..+ ..+.+..++|++|||.|+
T Consensus 138 --~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l-----~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 138 --TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL-----ENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp --CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC-----TTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred --ccChhhcccccCCCEEECCCCcCCccCHHHhcCc-----CCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 4444445556666666666666653222223322 23446666666666666654 466788999999999999
Q ss_pred CCCccccCCCCCCCc
Q 003140 388 TNAEQFCGSHSDDDN 402 (845)
Q Consensus 388 ~~~~~~~~~~~~~~~ 402 (845)
|++.+|..|...+..
T Consensus 211 c~~~~l~~wl~~~~~ 225 (290)
T 1p9a_G 211 CEILYFRRWLQDNAE 225 (290)
T ss_dssp GGGHHHHHHHHHTGG
T ss_pred CccHHHHHHHHhCcc
Confidence 999888877654433
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-27 Score=258.09 Aligned_cols=244 Identities=20% Similarity=0.213 Sum_probs=213.3
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+|++|.+++..+..|..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + ..++|++|++
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l 106 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHA 106 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEEC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEEEC
Confidence 479999999999999888899999999999999999997554 99999999999999999843 3 3489999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccC-CCCCCcEEEccCCcCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS-ELPKLLILQLDNNNFEG 240 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~ 240 (845)
++|++++..+.. +++|+.|++++|++++..+..+..+++|++|+|++|++++..+..+. .+++|++|+|++|++++
T Consensus 107 ~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 999999765544 57899999999999988788999999999999999999988777774 78999999999999985
Q ss_pred CCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCC-CccccCEEEccCCcCC-CCcccccC
Q 003140 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSNNKLT-GTIPSNFS 318 (845)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~Ls~N~l~-~~~p~~~~ 318 (845)
. + ....+++|++|+|++|++++.++.+..+++|+.|++++|+++ .+|..+ ...+|+.|+|++|.++ +.+|..+.
T Consensus 184 ~--~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V--K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E--E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c--c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 3 3 344589999999999999998888999999999999999999 456554 3459999999999999 88899999
Q ss_pred CCCCCCeEecc-cccCcccCCh
Q 003140 319 GLPRLQRLFIA-NNSLSGSIPS 339 (845)
Q Consensus 319 ~l~~L~~L~L~-~N~l~~~ip~ 339 (845)
.+++|+.|+++ .+.++|..|.
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccccceEEECCCchhccCCchh
Confidence 99999999999 4456665554
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=8e-27 Score=268.13 Aligned_cols=235 Identities=21% Similarity=0.213 Sum_probs=209.7
Q ss_pred cceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceee
Q 003140 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (845)
Q Consensus 81 ~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (845)
..+++.|+|++|.+++..|..|+.+++|++|+|++|.+++..| |..+++|++|+|++|.|++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3479999999999999888899999999999999999997665 999999999999999998533 338999999
Q ss_pred cccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccC-CCCCCcEEEccCCcCC
Q 003140 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS-ELPKLLILQLDNNNFE 239 (845)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~ 239 (845)
|++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976664 357899999999999998899999999999999999999998888886 7999999999999998
Q ss_pred CCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCC-CccccCEEEccCCcCC-CCccccc
Q 003140 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSNNKLT-GTIPSNF 317 (845)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~-~~~~L~~L~Ls~N~l~-~~~p~~~ 317 (845)
+. ..+..+++|+.|+|++|++++.++.+..+++|+.|+|++|.|++ +|..+ ...+|+.|+|++|.+. +.+|..+
T Consensus 183 ~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DV---KGQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EE---ECCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cc---cccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 63 33456999999999999999998889999999999999999996 55544 3458999999999998 7888999
Q ss_pred CCCCCCCeEecc
Q 003140 318 SGLPRLQRLFIA 329 (845)
Q Consensus 318 ~~l~~L~~L~L~ 329 (845)
..++.|+.|+++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 999999988886
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.5e-25 Score=235.32 Aligned_cols=229 Identities=20% Similarity=0.235 Sum_probs=191.2
Q ss_pred CCCCCCCc--ceEecCCCC---CC-CcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchh
Q 003140 61 DPCTSNWT--GVLCFNTTM---DD-GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (845)
Q Consensus 61 ~~c~~~w~--Gv~C~~~~~---~~-~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 134 (845)
|+|.+.+. .+.|.+... +. ....++.|++++|++++..+..|..+++|++|+|++|++++..+..|.++++|++
T Consensus 1 ~~C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80 (276)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCE
Confidence 45644444 477865432 12 2356999999999999888889999999999999999999877888999999999
Q ss_pred hhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCC-CccccCCCCCcceeeccccc
Q 003140 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNN 213 (845)
Q Consensus 135 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 213 (845)
|+|++|++++..+..|.++++|++|++++|++++..+..+.++++|++|++++|++++. +|..+..+++|++|+|++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999999988889999999999999999999988787899999999999999999864 69999999999999999999
Q ss_pred cccCCCcccCCCCCCc----EEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCc
Q 003140 214 LTGYLPPELSELPKLL----ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG 288 (845)
Q Consensus 214 l~~~~p~~l~~l~~L~----~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~ 288 (845)
+++..+..+..+++|+ .|++++|++++ ++.......+|+.|+|++|++++.++. +..+++|+.|++++|++++
T Consensus 161 l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~--~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF--IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCEECGGGGHHHHTCTTCCEEEECCSSCCCE--ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCcCCHHHhhhhhhccccceeeecCCCcccc--cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 9988777777777776 88999999975 333333445788888888888887765 5778888888888888775
Q ss_pred CCC
Q 003140 289 SIP 291 (845)
Q Consensus 289 ~ip 291 (845)
..+
T Consensus 239 ~c~ 241 (276)
T 2z62_A 239 SCP 241 (276)
T ss_dssp CTT
T ss_pred cCC
Confidence 443
No 321
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=1.9e-26 Score=267.45 Aligned_cols=191 Identities=14% Similarity=0.184 Sum_probs=146.8
Q ss_pred CCCccccccCceEEEEEEeCCCcEEEEEEccCCChh--------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCeEEEE
Q 003140 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 627 ~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
...+.||+|+||.||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 5788899876432211 134689999999999999999666666677778999
Q ss_pred EEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCC
Q 003140 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (845)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~ 778 (845)
|||+++|+|.++++. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+|+.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999965 4579999999999999998 999999999999999 9999999999876432
Q ss_pred CCCCccccceeecccCCCCccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
...............||+.|||||++.. ..|+.++|+||..+-..+-+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1000000001235679999999999986 668888999999999999998887774
No 322
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.8e-24 Score=233.94 Aligned_cols=224 Identities=18% Similarity=0.200 Sum_probs=181.1
Q ss_pred CCccEEEecCCCCCCCCcc---cccccccchhhhccCCCCCCCCCCcc--CCCCccceeecccccccCCCC----ccccC
Q 003140 106 SYLTILDFMWNKISGSIPK---EIGNIKSLELLLLNGNELTGSLPEEL--GYLPKLDRIQIDQNYISGSLP----KSFAN 176 (845)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 176 (845)
..++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578899988887631111 12345679999999999999999988 899999999999999997655 44568
Q ss_pred ccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccC--C--CcccCCCCCCcEEEccCCcCCCCCCcc----ccc
Q 003140 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--L--PPELSELPKLLILQLDNNNFEGTTIPA----SYS 248 (845)
Q Consensus 177 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~Ls~N~l~~~~~p~----~~~ 248 (845)
+++|++|+|++|++++..+..++.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET--PTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC--HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc--hHHHHHHHHh
Confidence 99999999999999988889999999999999999998752 2 2234788999999999999973 333 357
Q ss_pred cCCCccEEEcccCCCCCCC-CCCCCC---CCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCC
Q 003140 249 NMSKLLKLSLRNCSLQGPM-PDLSRI---PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (845)
Q Consensus 249 ~l~~L~~L~Ls~N~l~~~~-~~l~~l---~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (845)
++++|++|+|++|++++.. +.+..+ ++|++|+|++|+|+ .+|.... .+|+.|+|++|+|++. |. +..+++|+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8899999999999999974 445554 79999999999999 7777665 6899999999999865 33 67788888
Q ss_pred eEecccccCcc
Q 003140 325 RLFIANNSLSG 335 (845)
Q Consensus 325 ~L~L~~N~l~~ 335 (845)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 88888888873
No 323
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.91 E-value=3.9e-28 Score=277.72 Aligned_cols=304 Identities=17% Similarity=0.161 Sum_probs=211.2
Q ss_pred eEeEEEecCCCCcccCCCCc-cCCC----CccEEEecCCCCCC----CCcccccccccchhhhccCCCCCCCCCCcc---
Q 003140 83 HLRELQLLNLNLSGNLSPEI-GRLS----YLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEEL--- 150 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l-~~L~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--- 150 (845)
+++.|+|++|.+++..+..+ ..++ +|++|+|++|+++. .++..+.++++|++|+|++|.+++..+..+
T Consensus 57 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~ 136 (461)
T 1z7x_W 57 ALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEG 136 (461)
T ss_dssp TCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHH
T ss_pred CcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHH
Confidence 57788888887765433332 2244 58888888888774 457777788888888888888764333322
Q ss_pred --CCCCccceeecccccccCC----CCccccCccCCCEEEccCCCCCCCCccccC-----CCCCcceeeccccccccC--
Q 003140 151 --GYLPKLDRIQIDQNYISGS----LPKSFANLNKTRHFHMNNNSISGQIPPELS-----RLPSLVHMLLDNNNLTGY-- 217 (845)
Q Consensus 151 --~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~-- 217 (845)
...++|++|+|++|++++. ++..+..+++|++|++++|.++...+..+. ..++|++|+|++|++++.
T Consensus 137 l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 216 (461)
T 1z7x_W 137 LLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC 216 (461)
T ss_dssp HTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH
T ss_pred HhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH
Confidence 2245788888888887753 355566678888888888887644333332 256888888888888753
Q ss_pred --CCcccCCCCCCcEEEccCCcCCCCCC----ccccccCCCccEEEcccCCCCCC-----CCCCCCCCCccEEEcccccC
Q 003140 218 --LPPELSELPKLLILQLDNNNFEGTTI----PASYSNMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQL 286 (845)
Q Consensus 218 --~p~~l~~l~~L~~L~Ls~N~l~~~~~----p~~~~~l~~L~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l 286 (845)
++..+..+++|++|+|++|++++... +..+..+++|++|++++|+++.. +..+..+++|+.|++++|.+
T Consensus 217 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i 296 (461)
T 1z7x_W 217 RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCC
T ss_pred HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCC
Confidence 45666777888888888888764211 22233578888888888888763 33356678888899988888
Q ss_pred CcCCCCCCC------ccccCEEEccCCcCCCC----cccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEE
Q 003140 287 NGSIPPGRL------SLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356 (845)
Q Consensus 287 ~~~ip~~~~------~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ 356 (845)
++..+.... ..+|+.|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.....-..+.|+.|+
T Consensus 297 ~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~ 376 (461)
T 1z7x_W 297 GDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW 376 (461)
T ss_dssp HHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred chHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEE
Confidence 644332211 13789999999988865 56677778999999999999887766666543222245778999
Q ss_pred ccCCCCC-----CCCCCC-CCCCCcEEEecCCcccc
Q 003140 357 FQNNNLT-----NISGSF-NIPPNVTVRLRGNPFCL 386 (845)
Q Consensus 357 ls~N~l~-----~i~~~~-~~~~l~~l~l~~Np~~c 386 (845)
+++|+++ .++..+ .++.++.|++++|++..
T Consensus 377 L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 377 LADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred CCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 9999988 455554 47889999999998754
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.8e-24 Score=229.30 Aligned_cols=211 Identities=19% Similarity=0.232 Sum_probs=118.6
Q ss_pred ccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCC
Q 003140 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (845)
Q Consensus 102 l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (845)
+..+++|+.|++++|.++. ++ .+..+++|++|+|++|++++ + ..+..+++|++|+|++|.+++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3445556666666666552 22 35556666666666666553 2 2455556666666666666555555555555666
Q ss_pred EEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccC
Q 003140 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (845)
+|+|++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|++++ ..+..+.++++|+.|+|++|
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCC
Confidence 66666665554444455555555555555555554444445555555555555555554 23334455555555555555
Q ss_pred CCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChh
Q 003140 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (845)
Q Consensus 262 ~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (845)
++++.++. +..+++|+.|++++|.+ .+ .+++|++|+++.|+++|.+|.+
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~-----------------------~~-------~~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPW-----------------------DC-------TCPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCB-----------------------CC-------CTTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCc-----------------------cc-------cCcHHHHHHHHHHhCCCcccCc
Confidence 55554443 44445555555444444 42 2446777788888888888877
Q ss_pred hhhhccC
Q 003140 341 IWQSRTL 347 (845)
Q Consensus 341 l~~l~~l 347 (845)
++.+...
T Consensus 242 ~~~~~~~ 248 (272)
T 3rfs_A 242 AGSVAPD 248 (272)
T ss_dssp TSCBCGG
T ss_pred ccccCCC
Confidence 7665543
No 325
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=4.8e-23 Score=241.82 Aligned_cols=240 Identities=25% Similarity=0.320 Sum_probs=199.4
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 57999999999999 4555 5799999999999999 5675 67899999999999994 555 6789999999
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|+|++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++ +| ..+++|+.|+|++|++++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999995 5554 4899999999999995 454 35789999999999995 55 457899999999999985
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
+|.. +++|+.|++++|.++..+.. +++|+.|++++|.|++ +|. ...+|+.|+|++|+|+. +|. .++
T Consensus 196 -l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp~--~l~~L~~L~Ls~N~L~~-lp~---~~~ 261 (622)
T 3g06_A 196 -LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LPV--LPSELKELMVSGNRLTS-LPM---LPS 261 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred -CCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CCC--CCCcCcEEECCCCCCCc-CCc---ccc
Confidence 4443 47899999999999976643 4789999999999995 662 33589999999999994 555 678
Q ss_pred CCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCC
Q 003140 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (845)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~ 366 (845)
+|+.|+|++|+|+ .+|..+..+.+ |+.|+|++|.|++..
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~-----L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSS-----ETTVNLEGNPLSERT 300 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCT-----TCEEECCSCCCCHHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccc-----cCEEEecCCCCCCcC
Confidence 9999999999999 88988876654 559999999998643
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.1e-24 Score=228.84 Aligned_cols=222 Identities=21% Similarity=0.239 Sum_probs=165.4
Q ss_pred cccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceee
Q 003140 129 IKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 208 (845)
Q Consensus 129 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 208 (845)
+.++..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|.+++. ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 45666777777766643 235567777777777777763 2 2467777777888887777752 3677778888888
Q ss_pred ccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCC
Q 003140 209 LDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 209 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~ 287 (845)
|++|++++..+..|..+++|++|+|++|++++ ..+..|.++++|++|+|++|++++.++. +..+++|+.|++++|+++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCc-cCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 88888887666667778888888888888875 4555677888888888888888877665 677888888888888888
Q ss_pred cCCCCCCC-ccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCC-CC
Q 003140 288 GSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-NI 365 (845)
Q Consensus 288 ~~ip~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~-~i 365 (845)
+..+..+. ..+|+.|+|++|++++..+..|..+++|++|+|++|.+.+..| .++.|+++.|+++ .+
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~------------~l~~l~~~~n~~~g~i 238 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP------------GIRYLSEWINKHSGVV 238 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT------------TTHHHHHHHHHTGGGB
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc------------HHHHHHHHHHhCCCcc
Confidence 55554433 3588889999999998888889999999999999999997655 2456788889887 45
Q ss_pred CCCC
Q 003140 366 SGSF 369 (845)
Q Consensus 366 ~~~~ 369 (845)
|..+
T Consensus 239 p~~~ 242 (272)
T 3rfs_A 239 RNSA 242 (272)
T ss_dssp BCTT
T ss_pred cCcc
Confidence 5544
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.7e-23 Score=223.71 Aligned_cols=203 Identities=24% Similarity=0.270 Sum_probs=112.0
Q ss_pred ccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCC
Q 003140 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (845)
Q Consensus 102 l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (845)
++.+++|+++++++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|.|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455566666666666666 4444443 4566666666666655555566666666666666666533221 4555566
Q ss_pred EEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccC
Q 003140 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (845)
+|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhcccccCCCEEECCCC
Confidence 6666666555 445555555555555555555554444455555555555555555553 23334455555555555555
Q ss_pred CCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcc
Q 003140 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 262 ~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (845)
+++..++. +..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+..
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~------------------------~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY------------------------TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC------------------------ccChhhcccccCCeEEeCCCCccC
Confidence 55544443 344444554444444444 445555556677777777777653
No 328
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=4.1e-27 Score=269.24 Aligned_cols=303 Identities=17% Similarity=0.171 Sum_probs=225.4
Q ss_pred ceEeEEEecCCCCcccCCCC-ccCCCCccEEEecCCCCCC----CCcccccccccchhhhccCCCCCCCCCCcc-CCCC-
Q 003140 82 LHLRELQLLNLNLSGNLSPE-IGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEEL-GYLP- 154 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~-l~~L~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 154 (845)
.+++.|+|++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|++++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 47889999999887654333 7788899999999999875 356677888999999999999875434333 2344
Q ss_pred ---ccceeecccccccC----CCCccccCccCCCEEEccCCCCCCCCcccc-----CCCCCcceeeccccccccCC----
Q 003140 155 ---KLDRIQIDQNYISG----SLPKSFANLNKTRHFHMNNNSISGQIPPEL-----SRLPSLVHMLLDNNNLTGYL---- 218 (845)
Q Consensus 155 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~---- 218 (845)
+|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ...++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 69999999999884 458888999999999999999875433332 23567999999999988643
Q ss_pred CcccCCCCCCcEEEccCCcCCCCCCccccc-----cCCCccEEEcccCCCCCC-----CCCCCCCCCccEEEcccccCCc
Q 003140 219 PPELSELPKLLILQLDNNNFEGTTIPASYS-----NMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLNG 288 (845)
Q Consensus 219 p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l~~ 288 (845)
+..+..+++|++|+|++|.+++ ..+..+. .+++|++|+|++|.++.. +..+..+++|+.|++++|.+++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE-AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH-HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHhhCCCCCEEECcCCCcch-HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 5556677899999999999864 2333332 356899999999998874 2236677899999999998875
Q ss_pred CCC----CC-C-CccccCEEEccCCcCCCC----cccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEcc
Q 003140 289 SIP----PG-R-LSLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ 358 (845)
Q Consensus 289 ~ip----~~-~-~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls 358 (845)
... .. . ...+|+.|+|++|+++.. ++..+..+++|++|+|++|++++..+..+.....-..+.|+.|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 321 11 1 245899999999999865 6777778899999999999998776666665543344578899999
Q ss_pred CCCCCCCC-----CCC-CCCCCcEEEecCCccc
Q 003140 359 NNNLTNIS-----GSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 359 ~N~l~~i~-----~~~-~~~~l~~l~l~~Np~~ 385 (845)
+|.++... ..+ ..+.++.|++++|.+.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccc
Confidence 99987642 222 3688899999988764
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=9.1e-23 Score=215.90 Aligned_cols=204 Identities=22% Similarity=0.319 Sum_probs=125.5
Q ss_pred CccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEcc
Q 003140 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (845)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (845)
.++.+++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4567777777777 4565443 467777777777775555567777777777777777765555555666666666666
Q ss_pred CCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCC
Q 003140 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (845)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (845)
+|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc-cCHhHccCCcccceeEecCCcCcEe
Confidence 666665555555666666666666666665555555556666666666666553 2333345555555555555555544
Q ss_pred CCC-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccC
Q 003140 267 MPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI 337 (845)
Q Consensus 267 ~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i 337 (845)
++. +..++ +|+.|+|++|+|++..+..|..+++|+.|+|++|.+...-
T Consensus 173 ~~~~~~~l~-----------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 173 PEGAFDKLT-----------------------ELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CTTTTTTCT-----------------------TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred ChhHhccCC-----------------------CcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 432 34444 4555555555555455556777888888888888887543
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.2e-23 Score=218.09 Aligned_cols=191 Identities=20% Similarity=0.264 Sum_probs=118.5
Q ss_pred CCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCC
Q 003140 62 PCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE 141 (845)
Q Consensus 62 ~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (845)
.|+ .|.|++|.. ..+.+++++++++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+
T Consensus 3 ~Cp-~~~gC~C~~--------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 70 (251)
T 3m19_A 3 TCE-TVTGCTCNE--------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQ 70 (251)
T ss_dssp -CH-HHHSSEEEG--------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cCC-CCCceEcCC--------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCc
Confidence 354 589999943 2456778877777 4555554 567777777777777666667777777777777777
Q ss_pred CCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcc
Q 003140 142 LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPE 221 (845)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 221 (845)
+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|++++..+..
T Consensus 71 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 71 LQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHH
Confidence 77666666677777777777777776555556666666666666666666444444555555555555555555444434
Q ss_pred cCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcC
Q 003140 222 LSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 222 l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 289 (845)
|..+++|++|+|++|++ ++.++ .+..+++|+.|+|++|.+++.
T Consensus 151 ~~~l~~L~~L~L~~N~l-------------------------~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQL-------------------------QSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCC-------------------------SCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcC-------------------------CccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44455555555555544 44444 245555566666666666543
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.8e-23 Score=215.66 Aligned_cols=195 Identities=16% Similarity=0.187 Sum_probs=143.2
Q ss_pred CccEEEecCCCCCCCCcccccccccchhhhccCCC-CCCCCCCccCCCCccceeeccc-ccccCCCCccccCccCCCEEE
Q 003140 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LTGSLPEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFH 184 (845)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 184 (845)
+|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67788888888876666677778888888888886 7755555777788888888887 778766667777888888888
Q ss_pred ccCCCCCCCCccccCCCCCcc---eeecccc-ccccCCCcccCCCCCCc-EEEccCCcCCCCCCccccccCCCccEEEcc
Q 003140 185 MNNNSISGQIPPELSRLPSLV---HMLLDNN-NLTGYLPPELSELPKLL-ILQLDNNNFEGTTIPASYSNMSKLLKLSLR 259 (845)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls 259 (845)
+++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++. +|......++|+.|+|+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~--i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS--VQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE--ECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc--cCHhhcCCCCCCEEEcC
Confidence 88888775 555 77777777 8888888 77766666678888888 88888888863 44433233778888888
Q ss_pred cCC-CCCCCCC-CCCC-CCccEEEcccccCCcCCCCCCCccccCEEEccCC
Q 003140 260 NCS-LQGPMPD-LSRI-PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNN 307 (845)
Q Consensus 260 ~N~-l~~~~~~-l~~l-~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N 307 (845)
+|+ +++.++. +..+ ++|+.|++++|+++ .+|.. ...+|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~-~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK-GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT-TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh-HhccCceeeccCc
Confidence 884 7776554 6777 78888888888887 45544 3347888888776
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=6e-23 Score=221.93 Aligned_cols=225 Identities=20% Similarity=0.196 Sum_probs=186.0
Q ss_pred ceEeEEEecCCCCcccCCC---CccCCCCccEEEecCCCCCCCCcccc--cccccchhhhccCCCCCCCCC----CccCC
Q 003140 82 LHLRELQLLNLNLSGNLSP---EIGRLSYLTILDFMWNKISGSIPKEI--GNIKSLELLLLNGNELTGSLP----EELGY 152 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~---~l~~L~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 152 (845)
.+++.+.+.++.++...-. .+..+++|++|+|++|++++.+|..+ .++++|++|+|++|++++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3578888988887653111 12345679999999999999999888 999999999999999997666 34567
Q ss_pred CCccceeecccccccCCCCccccCccCCCEEEccCCCCCCC--C--ccccCCCCCcceeeccccccccCCCc----ccCC
Q 003140 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ--I--PPELSRLPSLVHMLLDNNNLTGYLPP----ELSE 224 (845)
Q Consensus 153 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p~----~l~~ 224 (845)
+++|++|+|++|++++..+..+.++++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 99999999999999988889999999999999999998742 2 2334789999999999999973 233 2577
Q ss_pred CCCCcEEEccCCcCCCCCCccccccC---CCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCE
Q 003140 225 LPKLLILQLDNNNFEGTTIPASYSNM---SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITT 301 (845)
Q Consensus 225 l~~L~~L~Ls~N~l~~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~ 301 (845)
+++|++|+|++|++++ ..|..+..+ ++|++|+|++|+++..+..+. ++|+.|+|++|+|++. |......+|+.
T Consensus 223 l~~L~~L~Ls~N~l~~-~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRA-TVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCC-CCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSC
T ss_pred CCCCCEEECCCCCCCc-cchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccE
Confidence 8999999999999997 567777776 699999999999997766664 7999999999999953 44444568999
Q ss_pred EEccCCcCCC
Q 003140 302 IKLSNNKLTG 311 (845)
Q Consensus 302 L~Ls~N~l~~ 311 (845)
|+|++|.|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999974
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=6.8e-25 Score=242.68 Aligned_cols=253 Identities=18% Similarity=0.161 Sum_probs=147.8
Q ss_pred EEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCc----ccccccc-cchhhhccCCCCCCCCCCccCCC-----Ccc
Q 003140 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP----KEIGNIK-SLELLLLNGNELTGSLPEELGYL-----PKL 156 (845)
Q Consensus 87 L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 156 (845)
.++++++++|.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4567777777777666666668888888887776555 5666676 77777777777776666666654 777
Q ss_pred ceeecccccccCCCCccccC----c-cCCCEEEccCCCCCCCCcccc----CC-CCCcceeeccccccccCCCc----cc
Q 003140 157 DRIQIDQNYISGSLPKSFAN----L-NKTRHFHMNNNSISGQIPPEL----SR-LPSLVHMLLDNNNLTGYLPP----EL 222 (845)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~l----~~-l~~L~~L~L~~N~l~~~~p~----~l 222 (845)
++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+ .. .++|++|+|++|++++.... .+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 77777777777665554433 3 677777777777765554433 22 24677777777777643322 23
Q ss_pred CCCC-CCcEEEccCCcCCCCCCcccc----ccC-CCccEEEcccCCCCCCCC-----CCCC-CCCccEEEcccccCCcCC
Q 003140 223 SELP-KLLILQLDNNNFEGTTIPASY----SNM-SKLLKLSLRNCSLQGPMP-----DLSR-IPNLGYLDLSSNQLNGSI 290 (845)
Q Consensus 223 ~~l~-~L~~L~Ls~N~l~~~~~p~~~----~~l-~~L~~L~Ls~N~l~~~~~-----~l~~-l~~L~~L~Ls~N~l~~~i 290 (845)
..++ +|++|+|++|++++ ..+..+ ..+ ++|+.|+|++|.+++... .+.. .++|+.|+|++|.+++..
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLAS-KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HTSCTTCCEEECTTSCGGG-SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred hcCCccccEeeecCCCCch-hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 3343 67777777777664 233322 333 466666666666665221 1222 236666666666665332
Q ss_pred CCC-----CCccccCEEEccCCcCCCCc-------ccccCCCCCCCeEecccccCcccCChh
Q 003140 291 PPG-----RLSLNITTIKLSNNKLTGTI-------PSNFSGLPRLQRLFIANNSLSGSIPSS 340 (845)
Q Consensus 291 p~~-----~~~~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (845)
+.. ....+|+.|+|++|.+.+.. +..+..+++|++|++++|++.+..+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~ 303 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIP 303 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHH
Confidence 211 11224555555555533222 224445555555555555555444433
No 334
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.3e-22 Score=210.30 Aligned_cols=178 Identities=21% Similarity=0.258 Sum_probs=132.9
Q ss_pred cchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecc
Q 003140 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (845)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (845)
..++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4455666666666 4555444 466667777777666666666777777777777777776666667777777777777
Q ss_pred ccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcC
Q 003140 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ 289 (845)
+|++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|++++.
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 777776666677778888888888888875 345567888888889999998888777 488999999999999999966
Q ss_pred CCCCCC-ccccCEEEccCCcCCCC
Q 003140 290 IPPGRL-SLNITTIKLSNNKLTGT 312 (845)
Q Consensus 290 ip~~~~-~~~L~~L~Ls~N~l~~~ 312 (845)
.+..+. ..+|+.|+|++|.+++.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 654443 35899999999999876
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.7e-22 Score=209.74 Aligned_cols=196 Identities=16% Similarity=0.141 Sum_probs=121.4
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCC-CCCCCcccccccccchhhhccC-CCCCCCCCCccCCCCccceee
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK-ISGSIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQ 160 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 160 (845)
.++.|++++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666666555566666666666666665 6654455666666666666666 666655555666666666666
Q ss_pred cccccccCCCCccccCccCCC---EEEccCC-CCCCCCccccCCCCCcc-eeeccccccccCCCcccCCCCCCcEEEccC
Q 003140 161 IDQNYISGSLPKSFANLNKTR---HFHMNNN-SISGQIPPELSRLPSLV-HMLLDNNNLTGYLPPELSELPKLLILQLDN 235 (845)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 235 (845)
|++|++++ +|. +..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 66666664 444 66666666 6666666 66655555566666666 6666666666 3333322225666666666
Q ss_pred Cc-CCCCCCccccccC-CCccEEEcccCCCCCCCCCCCCCCCccEEEcccc
Q 003140 236 NN-FEGTTIPASYSNM-SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 284 (845)
Q Consensus 236 N~-l~~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N 284 (845)
|+ +++ ..+..|.++ ++|+.|++++|++++.++. .+++|+.|+++++
T Consensus 189 n~~l~~-i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTV-IDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCE-ECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCccc-CCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 63 653 334556666 6666666666666655543 4556666666654
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=2e-22 Score=233.70 Aligned_cols=224 Identities=28% Similarity=0.350 Sum_probs=137.4
Q ss_pred cchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecc
Q 003140 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (845)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (845)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55555555555553 444332 45555555555555 344 334566666666666664 444 443 66666666
Q ss_pred ccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCC
Q 003140 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSI 290 (845)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~i 290 (845)
+|+|++ +|. .+++|+.|+|++|++++ +|. .+++|+.|+|++|+|++.+. +. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-ch
Confidence 666665 444 45667777777777764 343 45677777777777777555 44 77888888888887 66
Q ss_pred CCCCCcccc-------CEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCC--cceEEEccCCC
Q 003140 291 PPGRLSLNI-------TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNAT--ETFILDFQNNN 361 (845)
Q Consensus 291 p~~~~~~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~--~l~~L~ls~N~ 361 (845)
|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.....- ....+++++|+
T Consensus 196 p~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~~~~~~~~~~~~l~~~~ 272 (571)
T 3cvr_A 196 PA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDGQ 272 (571)
T ss_dssp CC-CC---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHHSCC---CEEECCC----
T ss_pred hh-HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhcCccccCCeeEEeecccc
Confidence 66 333 66 99999999999 578888889999999999999999999999887653210 11123444444
Q ss_pred CCCCCCCCCCCCCcEEEecCCcccccCCCccccCCC
Q 003140 362 LTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (845)
Q Consensus 362 l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~~~~~~~ 397 (845)
+.. ..|| .|+|...|+-...
T Consensus 273 ~~~---------------~~~p-~~~~~~~Wl~~~~ 292 (571)
T 3cvr_A 273 QNT---------------LHRP-LADAVTAWFPENK 292 (571)
T ss_dssp ---------------------C-CSHHHHTTCC---
T ss_pred ccc---------------cccc-chhhHHHHhhhhc
Confidence 432 2345 6888888774433
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=5.8e-22 Score=218.00 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=190.3
Q ss_pred CCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCC
Q 003140 63 CTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL 142 (845)
Q Consensus 63 c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 142 (845)
|.|.|..|.|.+ ++|+ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++
T Consensus 7 C~C~~~~v~C~~-----------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i 66 (350)
T 4ay9_X 7 CHCSNRVFLCQE-----------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66 (350)
T ss_dssp SEEETTEEEEES-----------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTT
T ss_pred cEeeCCEEEecC-----------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCC
Confidence 655666677743 4555 456655 36789999999999965556789999999999999998
Q ss_pred CCCCC-CccCCCCccce-eecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccc-cccccCCC
Q 003140 143 TGSLP-EELGYLPKLDR-IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLP 219 (845)
Q Consensus 143 ~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p 219 (845)
.+.+| ..|.++++|++ +.++.|+|+...|..|.++++|++|++++|+++...+..+....++..|++.+ |++....+
T Consensus 67 ~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp CCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT
T ss_pred CCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc
Confidence 76665 46788888775 66777999988888999999999999999999877666777778888888865 56776656
Q ss_pred cccCCCC-CCcEEEccCCcCCCCCCccccccCCCccEEEccc-CCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCc
Q 003140 220 PELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (845)
Q Consensus 220 ~~l~~l~-~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~ 296 (845)
..|..+. .++.|+|++|+|+. ++.......+|+.|++++ |.++..+++ |..+++|+.|||++|+|+ .+|...+
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~--i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~- 222 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQE--IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGL- 222 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCE--ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSC-
T ss_pred cchhhcchhhhhhccccccccC--CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhh-
Confidence 6677764 68899999999974 555555667899999975 677777664 788999999999999998 6665432
Q ss_pred cccCEEEccCCcCCCCcccccCCCCCCCeEecccccCc
Q 003140 297 LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (845)
Q Consensus 297 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (845)
.+|+.|.+.++.--..+| .+.++++|+.++++++.-.
T Consensus 223 ~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSHC 259 (350)
T ss_dssp TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHHH
T ss_pred ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCccc
Confidence 378888877765444666 4788999999999876543
No 338
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.5e-22 Score=214.73 Aligned_cols=195 Identities=22% Similarity=0.388 Sum_probs=121.0
Q ss_pred ccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcc
Q 003140 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (845)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 205 (845)
+.++++|++|++++|.++ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 344555555556655555 233 35555666666666666653333 55666666666666666532 2 456666666
Q ss_pred eeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEccccc
Q 003140 206 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQ 285 (845)
Q Consensus 206 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~ 285 (845)
+|+|++|++++. + .+..+++|++|+|++|++++ ++. +..+++|+.|+|++|++++.++ +..+++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITN--ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCc--Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 666666666643 2 26666677777777776664 222 6666777777777777766544 6667777777777777
Q ss_pred CCcCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcc
Q 003140 286 LNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 286 l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (845)
+++ ++......+|+.|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 185 l~~-~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISD-ISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCC-CGGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cCc-ChhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 763 3333333467777777777775543 7788888888888888873
No 339
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=6.8e-23 Score=217.84 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=128.6
Q ss_pred HHHHHHhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCCh------------------hhHHHHHHHHHHHHhcC
Q 003140 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------------------QGEKEFLTEIQFLSRLH 678 (845)
Q Consensus 617 ~~~~~~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~------------------~~~~~~~~Ei~~l~~l~ 678 (845)
..+......|...+.||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344445566777899999999999999997799999999864321 13457899999999999
Q ss_pred CCceeeEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEE
Q 003140 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (845)
Q Consensus 679 H~nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl 758 (845)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+.+ |+||||||+|||+
T Consensus 163 ~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl 226 (282)
T 1zar_A 163 G---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV 226 (282)
T ss_dssp T---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred C---CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence 4 555554433 45699999999999988 421 123469999999999999999 9999999999999
Q ss_pred cCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcC----------CCCCchhhHHHH
Q 003140 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----------HKLTDKSDVYSL 818 (845)
Q Consensus 759 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~DvwS~ 818 (845)
+ ++.+||+|||+|+.. ..|+|||++.+ .+++..+|+|.+
T Consensus 227 ~-~~~vkl~DFG~a~~~--------------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~~ 275 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV--------------------GEEGWREILERDVRNIITYFSRTYRTEKDINSA 275 (282)
T ss_dssp E-TTEEEECCCTTCEET--------------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_pred E-CCcEEEEECCCCeEC--------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHHH
Confidence 9 999999999998642 35789998754 345555666653
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=4.2e-24 Score=236.33 Aligned_cols=255 Identities=15% Similarity=0.156 Sum_probs=196.4
Q ss_pred EEEecCCCCCCCCcccccccccchhhhccCCCCCCCCC----CccCCCC-ccceeecccccccCCCCccccCc-----cC
Q 003140 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLP-KLDRIQIDQNYISGSLPKSFANL-----NK 179 (845)
Q Consensus 110 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 179 (845)
.++|++|+++|.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999877777789999999999997666 7788888 89999999999998888877776 99
Q ss_pred CCEEEccCCCCCCCCccccC----CC-CCcceeeccccccccCCCccc----CC-CCCCcEEEccCCcCCCC---CCccc
Q 003140 180 TRHFHMNNNSISGQIPPELS----RL-PSLVHMLLDNNNLTGYLPPEL----SE-LPKLLILQLDNNNFEGT---TIPAS 246 (845)
Q Consensus 180 L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~~p~~l----~~-l~~L~~L~Ls~N~l~~~---~~p~~ 246 (845)
|++|+|++|++++..+..+. .+ ++|++|+|++|++++..+..+ .. .++|++|+|++|++++. .++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999977766544 34 899999999999997665543 34 36999999999999752 12334
Q ss_pred cccCC-CccEEEcccCCCCCCCCC-----CCCC-CCccEEEcccccCCcC----CCCCCC--ccccCEEEccCCcCCCCc
Q 003140 247 YSNMS-KLLKLSLRNCSLQGPMPD-----LSRI-PNLGYLDLSSNQLNGS----IPPGRL--SLNITTIKLSNNKLTGTI 313 (845)
Q Consensus 247 ~~~l~-~L~~L~Ls~N~l~~~~~~-----l~~l-~~L~~L~Ls~N~l~~~----ip~~~~--~~~L~~L~Ls~N~l~~~~ 313 (845)
+..++ +|++|+|++|++++..+. +..+ ++|+.|+|++|.+++. ++..+. ..+|+.|+|++|.|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 999999999999876652 4455 5999999999999853 222222 237999999999998765
Q ss_pred c----cccCCCCCCCeEecccccCcccCChhhhhhcc--CCCCcceEEEccCCCCCC
Q 003140 314 P----SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT--LNATETFILDFQNNNLTN 364 (845)
Q Consensus 314 p----~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~--l~~~~l~~L~ls~N~l~~ 364 (845)
+ ..+..+++|+.|+|++|.+.+..+..+..+.. -....|+.||+++|+|..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4 44567889999999999977555554443321 134557778888887764
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=7.7e-25 Score=239.48 Aligned_cols=265 Identities=15% Similarity=0.194 Sum_probs=166.4
Q ss_pred CCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCC--CCccEEEecCCCCCCCCcccccccccchhhhccC
Q 003140 62 PCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL--SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNG 139 (845)
Q Consensus 62 ~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 139 (845)
.|. .|.++.|... .++.|+++++.+. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++
T Consensus 35 vc~-~W~~~~~~~~-------~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~ 102 (336)
T 2ast_B 35 VCK-RWYRLASDES-------LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSN 102 (336)
T ss_dssp SCH-HHHHHHTCST-------TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTT
T ss_pred HHH-HHHHHhcCch-------hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccC
Confidence 343 6999887432 3567888877766 3455666 7788888888887766554 55677788888887
Q ss_pred CCCCCC-CCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC-CCCCC-CccccCCCCCcceeecccc-ccc
Q 003140 140 NELTGS-LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN-SISGQ-IPPELSRLPSLVHMLLDNN-NLT 215 (845)
Q Consensus 140 N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~ 215 (845)
|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .++
T Consensus 103 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 103 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 777654 6666777777777777777777667777777777777777777 56542 4555666777777777777 766
Q ss_pred cC-CCcccCCCC-CCcEEEccCC--cCCCCCCccccccCCCccEEEcccCC-CCC-CCCCCCCCCCccEEEcccccCCcC
Q 003140 216 GY-LPPELSELP-KLLILQLDNN--NFEGTTIPASYSNMSKLLKLSLRNCS-LQG-PMPDLSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 216 ~~-~p~~l~~l~-~L~~L~Ls~N--~l~~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~l~~l~~L~~L~Ls~N~l~~~ 289 (845)
+. ++..+..++ +|++|+|++| .+++..++..+.++++|+.|++++|. +++ .++.+..+++|+.|++++|.
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~---- 258 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY---- 258 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT----
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC----
Confidence 43 455566677 7777777777 34422455566667777777777776 443 23345555666666666654
Q ss_pred CCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC
Q 003140 290 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS 368 (845)
Q Consensus 290 ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~ 368 (845)
.+.......+.++++|++|++++| ++.. .+..+. ..+..|++++|+++++.+.
T Consensus 259 ------------------~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~----~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 259 ------------------DIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLK----EALPHLQINCSHFTTIARP 311 (336)
T ss_dssp ------------------TCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHH----HHSTTSEESCCCSCCTTCS
T ss_pred ------------------CCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHH----hhCcceEEecccCccccCC
Confidence 111111124556677777777766 3321 222221 1123455677777655443
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=1.8e-24 Score=241.40 Aligned_cols=241 Identities=19% Similarity=0.251 Sum_probs=144.8
Q ss_pred CCCCccCCCCccEEEecCCCCCCCCc----ccccccccchhhhccCC---CCCCCCCCcc-------CCCCccceeeccc
Q 003140 98 LSPEIGRLSYLTILDFMWNKISGSIP----KEIGNIKSLELLLLNGN---ELTGSLPEEL-------GYLPKLDRIQIDQ 163 (845)
Q Consensus 98 ~~~~l~~L~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~ 163 (845)
++..+..+++|++|+|++|++++..+ ..|.++++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45566677778888888887776433 33567777888877775 3444555544 5677777777777
Q ss_pred ccccC----CCCccccCccCCCEEEccCCCCCCCCccccC----CC---------CCcceeeccccccc-cCCC---ccc
Q 003140 164 NYISG----SLPKSFANLNKTRHFHMNNNSISGQIPPELS----RL---------PSLVHMLLDNNNLT-GYLP---PEL 222 (845)
Q Consensus 164 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N~l~-~~~p---~~l 222 (845)
|.+++ .+|..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 77775 3566677777777777777777533332222 22 66777777777665 2333 245
Q ss_pred CCCCCCcEEEccCCcCCCC----CCccccccCCCccEEEcccCCCC----C-CCCCCCCCCCccEEEcccccCCcC----
Q 003140 223 SELPKLLILQLDNNNFEGT----TIPASYSNMSKLLKLSLRNCSLQ----G-PMPDLSRIPNLGYLDLSSNQLNGS---- 289 (845)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~----~~p~~~~~l~~L~~L~Ls~N~l~----~-~~~~l~~l~~L~~L~Ls~N~l~~~---- 289 (845)
..+++|++|+|++|+++.. ..+..+..+++|+.|+|++|.++ . .+..+..+++|+.|+|++|.+++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 5566677777777666521 12225566666666666666664 2 222355666666666666666543
Q ss_pred CCCCC---CccccCEEEccCCcCCC----Cccccc-CCCCCCCeEecccccCcccCC
Q 003140 290 IPPGR---LSLNITTIKLSNNKLTG----TIPSNF-SGLPRLQRLFIANNSLSGSIP 338 (845)
Q Consensus 290 ip~~~---~~~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~ip 338 (845)
++... ...+|+.|+|++|.+++ .+|..+ .++++|++|+|++|++++..|
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 22221 13356666666666665 355555 446666666666666665553
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=7.6e-22 Score=200.17 Aligned_cols=186 Identities=19% Similarity=0.247 Sum_probs=128.6
Q ss_pred CCCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCC
Q 003140 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (845)
+.|.|.|++|.|.... ++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 3 ~~C~C~~~~v~c~~~~-----------------l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 62 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQG-----------------RT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGN 62 (208)
T ss_dssp TTCEEETTEEECCSSC-----------------CS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCEECCCEEEecCCC-----------------cc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCC
Confidence 4677789999996532 22 233322 346777777777777655556677777777777777
Q ss_pred CCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCc
Q 003140 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (845)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 220 (845)
++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+.
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 63 KLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 77755555667777777777777777766666677777777777777777766566677777777777777777766555
Q ss_pred ccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCC
Q 003140 221 ELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIP 274 (845)
Q Consensus 221 ~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~ 274 (845)
.+..+++|++|+|++|.+.+ .+++|+.|+++.|+++|..|. ++.++
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~--------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC--------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HhccCCCccEEEecCCCeec--------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 67777777777777777654 245677777777777775553 44443
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=1.2e-21 Score=215.62 Aligned_cols=242 Identities=17% Similarity=0.165 Sum_probs=135.5
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCC-ccccCccCCCE-EEcc
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRH-FHMN 186 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~ 186 (845)
++++.++++++ .+|..+. ++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666666 4555442 456666666666663333445666666666666666544333 23455555443 3344
Q ss_pred CCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEccc-CCCCC
Q 003140 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQG 265 (845)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~-N~l~~ 265 (845)
.|+|+...|..|..+++|++|++++|+++...+.. +....++..|++.+ |++..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~-------------------------~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVH-------------------------KIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCT-------------------------TCCBSSCEEEEEESCTTCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchh-------------------------hcccchhhhhhhcccccccc
Confidence 45554444444444455555555555444333333 33444455555533 34444
Q ss_pred CCC-CCCCC-CCccEEEcccccCCcCCCCCCCccccCEEEccC-CcCCCCcccccCCCCCCCeEecccccCcccCCh-hh
Q 003140 266 PMP-DLSRI-PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS-SI 341 (845)
Q Consensus 266 ~~~-~l~~l-~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~-~l 341 (845)
.++ .+..+ ..++.|++++|+|+...+..+...+|+.|++++ |.++...+..|.++++|++|+|++|+|+ .+|. .+
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~ 222 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGL 222 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSC
T ss_pred ccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhh
Confidence 333 23333 246667777777763333333444677777764 5555444566788888888888888888 4554 33
Q ss_pred hhhccCCCCcceEEEcc-CCCCCCCCCCCCCCCCcEEEecCCcccccC
Q 003140 342 WQSRTLNATETFILDFQ-NNNLTNISGSFNIPPNVTVRLRGNPFCLNT 388 (845)
Q Consensus 342 ~~l~~l~~~~l~~L~ls-~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~ 388 (845)
.. |+.|.+. .++++.+|....++.+..+++. ||+.|+|
T Consensus 223 ~~--------L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~~ 261 (350)
T 4ay9_X 223 EN--------LKKLRARSTYNLKKLPTLEKLVALMEASLT-YPSHCCA 261 (350)
T ss_dssp TT--------CCEEECTTCTTCCCCCCTTTCCSCCEEECS-CHHHHHH
T ss_pred cc--------chHhhhccCCCcCcCCCchhCcChhhCcCC-CCccccc
Confidence 32 3344433 3567888865578899999985 7777765
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=5e-24 Score=237.86 Aligned_cols=241 Identities=18% Similarity=0.270 Sum_probs=180.2
Q ss_pred CCcccccccccchhhhccCCCCCCCC----CCccCCCCccceeecccc---cccCCCCccc-------cCccCCCEEEcc
Q 003140 121 SIPKEIGNIKSLELLLLNGNELTGSL----PEELGYLPKLDRIQIDQN---YISGSLPKSF-------ANLNKTRHFHMN 186 (845)
Q Consensus 121 ~~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~ 186 (845)
.++..+..+++|++|+|++|++++.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 56778888999999999999998653 344778999999999995 4555666655 788999999999
Q ss_pred CCCCCC----CCccccCCCCCcceeeccccccccCCCcccC----CC---------CCCcEEEccCCcCCCCCCc---cc
Q 003140 187 NNSISG----QIPPELSRLPSLVHMLLDNNNLTGYLPPELS----EL---------PKLLILQLDNNNFEGTTIP---AS 246 (845)
Q Consensus 187 ~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~Ls~N~l~~~~~p---~~ 246 (845)
+|.++. .+|..+..+++|++|+|++|++++..+..+. .+ ++|++|+|++|+++...++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999986 3677888899999999999998754333333 33 8999999999999743455 46
Q ss_pred cccCCCccEEEcccCCCC--C---CCC-CCCCCCCccEEEcccccCC----cCCCCCCC-ccccCEEEccCCcCCCC---
Q 003140 247 YSNMSKLLKLSLRNCSLQ--G---PMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRL-SLNITTIKLSNNKLTGT--- 312 (845)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~--~---~~~-~l~~l~~L~~L~Ls~N~l~----~~ip~~~~-~~~L~~L~Ls~N~l~~~--- 312 (845)
+..+++|+.|+|++|+++ + ..+ .+..+++|+.|+|++|.++ +.+|..+. ..+|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 778889999999999887 2 233 6778888999999999885 34554332 34788888888888765
Q ss_pred -ccccc--CCCCCCCeEecccccCcc----cCChhh-hhhccCCCCcceEEEccCCCCCCCC
Q 003140 313 -IPSNF--SGLPRLQRLFIANNSLSG----SIPSSI-WQSRTLNATETFILDFQNNNLTNIS 366 (845)
Q Consensus 313 -~p~~~--~~l~~L~~L~L~~N~l~~----~ip~~l-~~l~~l~~~~l~~L~ls~N~l~~i~ 366 (845)
++..+ +.+++|++|+|++|++++ .+|..+ .++ +.|+.|++++|+++...
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l-----~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM-----PDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHC-----TTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcC-----CCceEEEccCCcCCcch
Confidence 55666 337888888888888886 366665 223 34457777777777544
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=2.9e-21 Score=208.46 Aligned_cols=190 Identities=21% Similarity=0.363 Sum_probs=117.8
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
.+++.|++.++.++. ++ .+..+++|++|+|++|++++. +. +.++++|++|+|++|++++ ++ .+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEEC
Confidence 356667777776664 23 566677777777777777643 32 6667777777777777664 22 5666677777777
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCC
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (845)
++|++++. +. +..+++|++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 115 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~- 187 (308)
T 1h6u_A 115 TSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD- 187 (308)
T ss_dssp TTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc-
Confidence 77776643 22 6666677777777776664322 6666666666666666664322 6666666666666666654
Q ss_pred CCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCC
Q 003140 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (845)
++. +..+++|++|+|++|++++.++ +..+++|+.|++++|+++
T Consensus 188 -~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 188 -ISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp -CGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEE
T ss_pred -Chh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeee
Confidence 222 5666666666666666665543 555666666666666655
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.6e-21 Score=226.19 Aligned_cols=202 Identities=27% Similarity=0.364 Sum_probs=146.8
Q ss_pred CCC-CCCCCCC---CCcce-EecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccc
Q 003140 56 NWN-RGDPCTS---NWTGV-LCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIK 130 (845)
Q Consensus 56 ~W~-~~~~c~~---~w~Gv-~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~ 130 (845)
+|. ..++|.. .|.|+ .|... +++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..++
T Consensus 35 ~W~~~~~~~~~~~~~~~~l~~C~~~-------~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~ 100 (571)
T 3cvr_A 35 KWEKQALPGENRNEAVSLLKECLIN-------QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPA 100 (571)
T ss_dssp HHHTTCCTTCCHHHHHHHHHHHHHT-------TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCT
T ss_pred HHhccCCccccccchhhhccccccC-------CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccC
Confidence 453 2345632 48998 78542 68899999999987 777663 78999999999998 677 4578
Q ss_pred cchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecc
Q 003140 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (845)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (845)
+|++|+|++|+|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|+
T Consensus 101 ~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 101 SLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVR 168 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECC
Confidence 89999999999986 777 665 89999999999886 555 67888888888888885 555 56788888888
Q ss_pred ccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCc-------cEEEcccCCCCCCCCCCCCCCCccEEEccc
Q 003140 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL-------LKLSLRNCSLQGPMPDLSRIPNLGYLDLSS 283 (845)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~ 283 (845)
+|+|++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+..+..+..+++|+.|+|++
T Consensus 169 ~N~L~~-lp~-l~--~~L~~L~Ls~N~L~--~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~ 239 (571)
T 3cvr_A 169 NNQLTF-LPE-LP--ESLEALDVSTNLLE--SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILED 239 (571)
T ss_dssp SSCCSC-CCC-CC--TTCCEEECCSSCCS--SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCS
T ss_pred CCCCCC-cch-hh--CCCCEEECcCCCCC--chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeC
Confidence 888886 565 55 78888888888887 3555 443 55 666666666666555555566666666666
Q ss_pred ccCCcCCCC
Q 003140 284 NQLNGSIPP 292 (845)
Q Consensus 284 N~l~~~ip~ 292 (845)
|.|++.+|.
T Consensus 240 N~l~~~~p~ 248 (571)
T 3cvr_A 240 NPLSSRIRE 248 (571)
T ss_dssp SSCCHHHHH
T ss_pred CcCCCcCHH
Confidence 666655444
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=5.7e-23 Score=224.61 Aligned_cols=247 Identities=16% Similarity=0.204 Sum_probs=164.6
Q ss_pred CccEEEecCCCCCCCCccccccc--ccchhhhccCCCCCCCCCCccCCCCccceeecccccccCC-CCccccCccCCCEE
Q 003140 107 YLTILDFMWNKISGSIPKEIGNI--KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS-LPKSFANLNKTRHF 183 (845)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 183 (845)
.++.|++++|.+. +..+..+ ++|+.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788999988877 5667777 7888888888888866555 55788888888888888755 67777778888888
Q ss_pred EccCCCCCCCCccccCCCCCcceeecccc-ccccC-CCcccCCCCCCcEEEccCC-cCCCCCCccccccCC-CccEEEcc
Q 003140 184 HMNNNSISGQIPPELSRLPSLVHMLLDNN-NLTGY-LPPELSELPKLLILQLDNN-NFEGTTIPASYSNMS-KLLKLSLR 259 (845)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~~~p~~~~~l~-~L~~L~Ls 259 (845)
+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++..++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888777666667777777777777777 56542 4444566666777777766 665422455555666 66666666
Q ss_pred cCCCCCCCCCCCCCCCccEEEcccccCC-cCCCCCC-CccccCEEEccCCc-CCCCcccccCCCCCCCeEecccccCccc
Q 003140 260 NCSLQGPMPDLSRIPNLGYLDLSSNQLN-GSIPPGR-LSLNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (845)
Q Consensus 260 ~N~l~~~~~~l~~l~~L~~L~Ls~N~l~-~~ip~~~-~~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (845)
+|.+ .++ +.+|... ...+|+.|+|++|. +++..+..+..+++|++|+|++|. +.
T Consensus 204 ~~~~---------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~ 260 (336)
T 2ast_B 204 GYRK---------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DI 260 (336)
T ss_dssp SCGG---------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TC
T ss_pred CCcc---------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CC
Confidence 5521 122 1122111 12256666666666 566677788999999999999996 34
Q ss_pred CChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CC-CCCcEEEecCCcccc
Q 003140 337 IPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NI-PPNVTVRLRGNPFCL 386 (845)
Q Consensus 337 ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~-~~l~~l~l~~Np~~c 386 (845)
.+..+..+.. .++|+.|++++| ++... .+ ..+..|++++|.+..
T Consensus 261 ~~~~~~~l~~--~~~L~~L~l~~~----i~~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 261 IPETLLELGE--IPTLKTLQVFGI----VPDGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp CGGGGGGGGG--CTTCCEEECTTS----SCTTCHHHHHHHSTTSEESCCCSCC
T ss_pred CHHHHHHHhc--CCCCCEEeccCc----cCHHHHHHHHhhCcceEEecccCcc
Confidence 4554333332 456789999999 44432 12 235566688887754
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.4e-20 Score=190.75 Aligned_cols=179 Identities=18% Similarity=0.246 Sum_probs=88.1
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 35566666655 344333 235566666666665444444555555555555555555444444455555555555555
Q ss_pred CCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC
Q 003140 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (845)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 268 (845)
++++..+..+..+++|++|+|++|++++..+..| .++++|+.|+|++|++++.++
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-------------------------~~l~~L~~L~l~~N~l~~~~~ 141 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVF-------------------------DKLTQLKDLRLYQNQLKSVPD 141 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT-------------------------TTCTTCCEEECCSSCCSCCCT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHh-------------------------ccCCcCCEEECCCCccceeCH
Confidence 5554333344444445555544444443333334 444444444444444444443
Q ss_pred C-CCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCCCC
Q 003140 269 D-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (845)
Q Consensus 269 ~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (845)
. +..+++|+.|++++|.+.+..| +|+.|+++.|+++|.+|..++.++
T Consensus 142 ~~~~~l~~L~~L~l~~N~~~~~~~------~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 142 GVFDRLTSLQYIWLHDNPWDCTCP------GIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCTT------TTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HHhccCCCccEEEecCCCeecCCC------CHHHHHHHHHhCCceeeccCcccc
Confidence 3 4445555555555554443222 334444444444455555444443
No 350
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.7e-19 Score=185.80 Aligned_cols=154 Identities=22% Similarity=0.278 Sum_probs=124.6
Q ss_pred CCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCC
Q 003140 66 NWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGS 145 (845)
Q Consensus 66 ~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (845)
.|.+|.|... +++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+..
T Consensus 20 s~~~v~c~~~-----------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 20 SGTTVDCRSK-----------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp ETTEEECTTS-----------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred eCCEeEccCC-----------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 5999999543 232 4555443 7899999999999988888899999999999999999866
Q ss_pred CCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCC
Q 003140 146 LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 225 (845)
Q Consensus 146 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 225 (845)
.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 6667788999999999999998777777888888888888888888 677788888888888888888886666667778
Q ss_pred CCCcEEEccCCcCCC
Q 003140 226 PKLLILQLDNNNFEG 240 (845)
Q Consensus 226 ~~L~~L~Ls~N~l~~ 240 (845)
++|+.|+|++|.+.+
T Consensus 159 ~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTCCEEECTTSCBCT
T ss_pred CCCCEEEeeCCCccC
Confidence 888888888887765
No 351
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.2e-19 Score=185.52 Aligned_cols=150 Identities=19% Similarity=0.210 Sum_probs=113.7
Q ss_pred EecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeeccccccc
Q 003140 88 QLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYIS 167 (845)
Q Consensus 88 ~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 167 (845)
++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|+
T Consensus 17 ~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 93 (220)
T 2v9t_B 17 DCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 93 (220)
T ss_dssp ECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC
T ss_pred EcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC
Confidence 33444555 3555544 67888888888888776777888888888888888888777888888888888888888888
Q ss_pred CCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 168 GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 168 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 94 ~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 6666667778888888888888887777777777778888887777776666667777777777777777754
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.1e-19 Score=200.75 Aligned_cols=185 Identities=21% Similarity=0.233 Sum_probs=91.0
Q ss_pred ceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccC-CCCCcceeeccccccccCCCcccCCCCCCcEEEccC
Q 003140 157 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDN 235 (845)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 235 (845)
+.+++++|+|+ .+|..+. +.++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45566666555 3443332 2345555555555544444444 455555555555555544444455555555555555
Q ss_pred CcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcc
Q 003140 236 NNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIP 314 (845)
Q Consensus 236 N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p 314 (845)
|++++ ..+..|.++++|+.|+|++|++++..+ .|..+++|+.|+|++|+|+ +..+
T Consensus 98 N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-----------------------~l~~ 153 (361)
T 2xot_A 98 NHLHT-LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-----------------------RFPV 153 (361)
T ss_dssp SCCCE-ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-----------------------SCCG
T ss_pred CcCCc-CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-----------------------eeCH
Confidence 55543 223334444444444444444444322 2333444444444433333 2222
Q ss_pred ccc---CCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCCc
Q 003140 315 SNF---SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAE 391 (845)
Q Consensus 315 ~~~---~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~~~~~l~~l~l~~Np~~c~~~~~ 391 (845)
..| ..+++|+.|+|++|+|++..+..+..+..+ .+..|+|.+|||.|||.+.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~-------------------------~l~~l~l~~N~~~C~C~l~ 208 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAW-------------------------VKNGLYLHNNPLECDCKLY 208 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHH-------------------------HHTTEECCSSCEECCHHHH
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHh-------------------------hcceEEecCCCccCCcCcH
Confidence 222 345666666666666663333333332211 0256889999999999987
Q ss_pred cc
Q 003140 392 QF 393 (845)
Q Consensus 392 ~~ 393 (845)
++
T Consensus 209 ~~ 210 (361)
T 2xot_A 209 QL 210 (361)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=8e-20 Score=214.15 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=15.5
Q ss_pred ccCEEEccCCcCCCCcccccCCCCCCCeEecccccCc
Q 003140 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (845)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (845)
+|+.|+|++|+|++. ..+..+++|+.|+|++|+++
T Consensus 176 ~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 176 KLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp TCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 344444444444332 23444555555555555544
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.6e-19 Score=183.11 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=119.2
Q ss_pred EEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCc-ccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP-KEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 86 ~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
.++++++.++. +|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 46666777764 566554 356889999999887654 45788888888888888888777778888888888888888
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+.+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 8887777778888888888888888887777778888888888888888887777777777788888888877765
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=1.6e-19 Score=193.13 Aligned_cols=171 Identities=25% Similarity=0.359 Sum_probs=82.0
Q ss_pred CCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEE
Q 003140 152 YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLIL 231 (845)
Q Consensus 152 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 231 (845)
.+++|+.|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 344444444444444422 1 23444444444444444443222 44444444444444444431 224444444455
Q ss_pred EccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCC
Q 003140 232 QLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTG 311 (845)
Q Consensus 232 ~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~ 311 (845)
+|++|++++ + ..+..+++|+.|++++|++++. +.+..+++|+.|++++|.+++..+ .....+|+.|+|++|.|++
T Consensus 118 ~L~~n~i~~--~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 118 SLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp ECTTSCCCC--C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB
T ss_pred ECCCCcCCC--C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC
Confidence 554444443 1 2344445555555555554443 334445555555555555543322 2223355555555555554
Q ss_pred CcccccCCCCCCCeEecccccCcc
Q 003140 312 TIPSNFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 312 ~~p~~~~~l~~L~~L~L~~N~l~~ 335 (845)
. + .+..+++|+.|++++|+++.
T Consensus 193 l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 L-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp C-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-h-hhccCCCCCEEECcCCcccC
Confidence 3 2 36777788888888887774
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=1.5e-20 Score=225.90 Aligned_cols=231 Identities=18% Similarity=0.216 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHhccCC-CCCCCCCCCC-CCCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCc---
Q 003140 34 PIEVSALRSIKKSLVDD-YSKLSNWNRG-DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYL--- 108 (845)
Q Consensus 34 ~~~~~al~~~k~~~~~~-~~~l~~W~~~-~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L--- 108 (845)
..++++|.++..+.... ...-..|... .++ ..|.++.++.. +++.|+|.++++... +..+.....|
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~-------~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~ 201 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPS-GTATNSAVSTP-------LTPKIELFANGKDEA-NQALLQHKKLSQY 201 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCcc-ccCCCceecCC-------ccceEEeeCCCCCcc-hhhHhhcCccCcc
Confidence 45688899998777432 2233467443 333 35888888653 688999998888863 3333222222
Q ss_pred --cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEcc
Q 003140 109 --TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (845)
Q Consensus 109 --~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (845)
..++++.|.+. ..|..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.+|++|++|+|+
T Consensus 202 ~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 202 SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 22233334444 45677788888888888888887 67777778888888888888888 777778888888888888
Q ss_pred CCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCC-ccEEEcccCCCCC
Q 003140 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQG 265 (845)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~-L~~L~Ls~N~l~~ 265 (845)
+|+|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++ .+|..+..+.. +..|+|++|.+++
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK-QFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS-HHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC-CChHHHhhcchhhhHHhhccCcccC
Confidence 88888 66888888888888888888887 667778888888888888888876 56666654422 2235666776666
Q ss_pred CCCCCCCCCCccEEEcccc
Q 003140 266 PMPDLSRIPNLGYLDLSSN 284 (845)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N 284 (845)
.+|. .|+.|+++.|
T Consensus 356 ~~p~-----~l~~l~l~~n 369 (727)
T 4b8c_D 356 PLPH-----ERRFIEINTD 369 (727)
T ss_dssp CCCC-----C---------
T ss_pred cCcc-----ccceeEeecc
Confidence 5442 4455555555
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=3.3e-19 Score=190.54 Aligned_cols=189 Identities=21% Similarity=0.369 Sum_probs=120.0
Q ss_pred ccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccC
Q 003140 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (845)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (845)
+..+.+..+.+++.. .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344455555555432 24556667777777777663 33 36667777777777777765443 66777777777777
Q ss_pred CCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCC
Q 003140 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (845)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (845)
|++++ + ..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++.+
T Consensus 100 n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 100 NKVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI---TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SCCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CcCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc---hhhccCCCCCEEEccCCccccch
Confidence 77764 2 2366677777777777777653 4566667777777777777642 45666777777777777776655
Q ss_pred CCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCC
Q 003140 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTG 311 (845)
Q Consensus 268 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~ 311 (845)
+ +..+++|+.|++++|.+++ ++......+|+.|++++|+++.
T Consensus 173 ~-l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 P-LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G-GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEEC
T ss_pred h-hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccC
Confidence 5 6666777777777777763 4443334467777777776664
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=4.1e-19 Score=208.11 Aligned_cols=200 Identities=21% Similarity=0.346 Sum_probs=144.4
Q ss_pred CCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEE
Q 003140 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (845)
Q Consensus 105 L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (845)
+..+..+.|..+.+.+.++ +..|++|+.|+|++|.+. .+| .+..+++|+.|+|++|+|++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3345556677777765443 567788888888888887 344 47788888888888888886554 77888888888
Q ss_pred ccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCC
Q 003140 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (845)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 264 (845)
|++|.|++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l---~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI---TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC---GGGGSCTTCSEEECCSSCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc---hhhcccCCCCEEECcCCcCC
Confidence 88888874 33 677788888888888888753 4577788888888888888752 56777888888888888887
Q ss_pred CCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCcccccCC
Q 003140 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSG 319 (845)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (845)
+.++ +..+++|+.|+|++|.|++ +|......+|+.|+|++|++++.....+..
T Consensus 167 ~~~~-l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 167 DIVP-LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CCGG-GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred Cchh-hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCcCcCCccccccc
Confidence 7666 7777888888888888874 454444557888888888877654433333
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=3.7e-19 Score=196.39 Aligned_cols=152 Identities=22% Similarity=0.296 Sum_probs=100.2
Q ss_pred EEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCccccc-ccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 86 ~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
.+++++++|+. +|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 46666677764 555443 3477788888888766666666 7777777777777777666667777777777777777
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCccc---CCCCCCcEEEccCCcCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL---SELPKLLILQLDNNNFEG 240 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~ 240 (845)
+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 7776666667777777777777777766556666666666666666666664333333 345555555555555553
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.9e-19 Score=179.12 Aligned_cols=150 Identities=21% Similarity=0.318 Sum_probs=87.9
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45777777777 5565544 46777777777777555556667777777777777776666666666666666666666
Q ss_pred CCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCC
Q 003140 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (845)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (845)
+|+...+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~ 163 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT-IAKGTFSPLRAIQTMHLAQNP 163 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE-ECHHHHhCCCCCCEEEeCCCC
Confidence 6664444445555666666666665555555555555555555555555543 222333334334333333333
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=178.73 Aligned_cols=151 Identities=23% Similarity=0.295 Sum_probs=91.6
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCC-CccCCCCccceeecccccccCCCCccccCccCCCEEEccC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP-EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (845)
+++++++|.++ .+|..+. ..+++|+|++|+|++..| ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777777 4665553 245677777777775543 3466677777777777777665566666666666666666
Q ss_pred CCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCC
Q 003140 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (845)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (845)
|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++ ..|..|..+++|+.|+|++|.+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT-VAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC-BCTTTTTTCTTCCEEECCSCCE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE-ECHHHhcCCCCCCEEEecCcCC
Confidence 66665555556666666666666666665555555555555555555555554 2344444444444444444443
No 362
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=7.2e-19 Score=184.42 Aligned_cols=137 Identities=19% Similarity=0.105 Sum_probs=107.5
Q ss_pred CCCCccccccCceEEEEEEe-CCCcE--EEEEEccCCChh------------------------hHHHHHHHHHHHHhcC
Q 003140 626 FNSSTQIGQGGYGKVYKGIL-PDGTV--VAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (845)
Q Consensus 626 f~~~~~LG~G~fG~Vy~~~~-~~g~~--vAVK~~~~~~~~------------------------~~~~~~~Ei~~l~~l~ 678 (845)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 68999 999987543111 1236889999999998
Q ss_pred CCce--eeEEEEEeeCCeEEEEEEcCCC-C----CHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEecC
Q 003140 679 HRNL--VSLVGYCDEEGEQMLVYEFMSN-G----TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRD 750 (845)
Q Consensus 679 H~nI--v~l~g~~~~~~~~~LV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~iiHrD 750 (845)
|+++ +.++++ +..+|||||+.+ | +|.++... .++.....++.|+++||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8754 444443 356899999942 4 78776543 123456789999999999999 888 99999
Q ss_pred CCCCCEEEcCCCcEEEEecCCcccCC
Q 003140 751 IKASNILLDHKFTAKVADFGLSRLAP 776 (845)
Q Consensus 751 Lk~~NILl~~~~~~kl~DFGla~~~~ 776 (845)
|||+|||+++ .++|+|||+|....
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999998 99999999997653
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=4.2e-19 Score=186.81 Aligned_cols=171 Identities=20% Similarity=0.337 Sum_probs=115.8
Q ss_pred CCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEE
Q 003140 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (845)
Q Consensus 104 ~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (845)
.+.++..++|++|.+++ ++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|+|++..+ +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 34556666677777663 33 4666777777777777776 444 56677777777777777775444 6777777777
Q ss_pred EccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCC
Q 003140 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (845)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (845)
+|++|++++ +|... . ++|++|+|++|++++. +.+..+++|+.|+|++|++++ ++ .+..+++|+.|+|++|++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcC
Confidence 777777764 33322 2 6777777777777753 357777777777777777765 22 577777777777777777
Q ss_pred CCCCCCCCCCCCccEEEcccccCCcC
Q 003140 264 QGPMPDLSRIPNLGYLDLSSNQLNGS 289 (845)
Q Consensus 264 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ 289 (845)
++. ..+..+++|+.|++++|.+++.
T Consensus 163 ~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred cch-HHhccCCCCCEEeCCCCcccCC
Confidence 776 5577777777777777777643
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=6.5e-18 Score=173.84 Aligned_cols=133 Identities=19% Similarity=0.226 Sum_probs=74.4
Q ss_pred CccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEc
Q 003140 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQL 233 (845)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 233 (845)
++|++|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 34444444444444444444444444444444444444333334455555555555555555444444555666666666
Q ss_pred cCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCc
Q 003140 234 DNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG 288 (845)
Q Consensus 234 s~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~ 288 (845)
++|+++ .+|..+..+++|+.|+|++|++++.++. +..+++|+.|+|++|.+.+
T Consensus 120 s~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666665 3566666666777777777777665543 6666777777777777664
No 365
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.76 E-value=7.3e-21 Score=224.49 Aligned_cols=295 Identities=15% Similarity=0.098 Sum_probs=160.2
Q ss_pred EeEEEecCCC-Ccc-cCCCCccCCCCccEEEecCCCCCCC----CcccccccccchhhhccCCCCCC----CCCCccCCC
Q 003140 84 LRELQLLNLN-LSG-NLSPEIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTG----SLPEELGYL 153 (845)
Q Consensus 84 v~~L~L~~~~-l~~-~~~~~l~~L~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l 153 (845)
++.|+|.+|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7777777765 211 1222234667777777777776654 33344566777777777777762 223334566
Q ss_pred CccceeecccccccCCCCccccCccCCCEEEccCCCC--------------------------CCCCccccCCCCCccee
Q 003140 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI--------------------------SGQIPPELSRLPSLVHM 207 (845)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l--------------------------~~~~p~~l~~l~~L~~L 207 (845)
++|++|+|++|.+.+ ++..+.++++|+.|+++.+.. .+.+|..+..+++|++|
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L 298 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKL 298 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEE
Confidence 777777777776663 445555555555555543211 12345555566677777
Q ss_pred eccccccccCCC-cccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEccc-----------CCCCCCC-CC-CCCC
Q 003140 208 LLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-----------CSLQGPM-PD-LSRI 273 (845)
Q Consensus 208 ~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~-----------N~l~~~~-~~-l~~l 273 (845)
+|++|.+++... ..+..+++|++|+|+ |.+.+..++..+..+++|++|+|++ |.+++.. .. ...+
T Consensus 299 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (592)
T 3ogk_B 299 DLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC 377 (592)
T ss_dssp EETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHC
T ss_pred ecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhC
Confidence 777776553322 224566667777666 4443323344445566677777762 4444311 11 2335
Q ss_pred CCccEEEcccccCCcCCCCCCC--ccccCEEEcc----CCcCCCC-----cccccCCCCCCCeEecccc--cCcccCChh
Q 003140 274 PNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS----NNKLTGT-----IPSNFSGLPRLQRLFIANN--SLSGSIPSS 340 (845)
Q Consensus 274 ~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~ip~~ 340 (845)
++|++|+++.|.+++..+.... ..+|+.|+|+ .|.+++. ++..+.++++|++|+|++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 6677777766666644333221 2356666664 5566643 3333555666666666532 255444444
Q ss_pred hhhhccCCCCcceEEEccCCCCCC--CCCCC-CCCCCcEEEecCCcc
Q 003140 341 IWQSRTLNATETFILDFQNNNLTN--ISGSF-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 341 l~~l~~l~~~~l~~L~ls~N~l~~--i~~~~-~~~~l~~l~l~~Np~ 384 (845)
+.. ..++|+.|++++|+++. ++..+ .++.++.|++++|++
T Consensus 458 ~~~----~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 458 IGQ----YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHH----SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHH----hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 332 12345566666666653 22211 356666666666664
No 366
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.75 E-value=1.3e-20 Score=222.41 Aligned_cols=298 Identities=12% Similarity=0.082 Sum_probs=199.8
Q ss_pred ceEeEEEecCCCCccc----CCCCccCCCCccEEEecCCCCCC----CCcccccccccchhhhccCCCCCC---------
Q 003140 82 LHLRELQLLNLNLSGN----LSPEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTG--------- 144 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~----~~~~l~~L~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~--------- 144 (845)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~ 243 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAA 243 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCT
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhh
Confidence 3567777777766544 22334556677777777776652 233344556667777777766553
Q ss_pred -----------------CCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCc-cccCCCCCcce
Q 003140 145 -----------------SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVH 206 (845)
Q Consensus 145 -----------------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~ 206 (845)
..+..+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|++
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~ 322 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEV 322 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCE
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCE
Confidence 222344455555555555543 23677788889999999999999764433 34688999999
Q ss_pred eeccccccccCCCcccCCCCCCcEEEcc-----------CCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCC-C
Q 003140 207 MLLDNNNLTGYLPPELSELPKLLILQLD-----------NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSR-I 273 (845)
Q Consensus 207 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls-----------~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~-l 273 (845)
|+++++...+.++..+..+++|++|+|+ .|.+++..++.....+++|++|+++.|++++... .+.. +
T Consensus 323 L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~ 402 (592)
T 3ogk_B 323 LETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYL 402 (592)
T ss_dssp EEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHC
T ss_pred EeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhC
Confidence 9999443333334444668899999999 4667643344445678999999999999976433 2433 7
Q ss_pred CCccEEEcc----cccCCcCCCC-----C-CCccccCEEEccCC--cCCCCcccccCC-CCCCCeEecccccCcccC-Ch
Q 003140 274 PNLGYLDLS----SNQLNGSIPP-----G-RLSLNITTIKLSNN--KLTGTIPSNFSG-LPRLQRLFIANNSLSGSI-PS 339 (845)
Q Consensus 274 ~~L~~L~Ls----~N~l~~~ip~-----~-~~~~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~i-p~ 339 (845)
++|+.|+++ .|.+++...+ . ....+|+.|+|++| .+++..+..+.. +++|++|+|++|++++.. +.
T Consensus 403 ~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 482 (592)
T 3ogk_B 403 KNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLME 482 (592)
T ss_dssp CSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHH
T ss_pred CCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHH
Confidence 899999996 7778753211 1 11348999999854 477666666554 889999999999988633 22
Q ss_pred hhhhhccCCCCcceEEEccCCCCCC--CCCCC-CCCCCcEEEecCCccc
Q 003140 340 SIWQSRTLNATETFILDFQNNNLTN--ISGSF-NIPPNVTVRLRGNPFC 385 (845)
Q Consensus 340 ~l~~l~~l~~~~l~~L~ls~N~l~~--i~~~~-~~~~l~~l~l~~Np~~ 385 (845)
.+.. .++|+.|++++|.++. ++... .++.++.|++++|++.
T Consensus 483 ~~~~-----~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 483 FSRG-----CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHTC-----CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred HHhc-----CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 2222 3567799999999863 22222 4889999999999864
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=5.9e-21 Score=222.44 Aligned_cols=203 Identities=16% Similarity=0.134 Sum_probs=109.3
Q ss_pred cCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCE
Q 003140 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (845)
Q Consensus 103 ~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (845)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|.....+| ..+..+.+.+.+|..+.++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~-----------~ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII-----------LLMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH-----------HHHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH-----------HHHHhcccccCCHHHHHHHHhccc
Confidence 45677777777777776 667777777777777776554100000 000011123344444555555555
Q ss_pred EE-ccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccC
Q 003140 183 FH-MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (845)
Q Consensus 183 L~-L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (845)
|+ ++.|.+ .+|..+.+++|.++...+ ..|+.|+|++|++++ +|. ++++++|+.|+|++|
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~--lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS--CCC-GGGGTTCCEEECCSS
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC--CcC-ccccccCcEeecCcc
Confidence 54 333322 234444444454442211 125555555555553 333 555555555555555
Q ss_pred CCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCccccCEEEccCCcCCCCc-ccccCCCCCCCeEecccccCcccCC
Q 003140 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSGSIP 338 (845)
Q Consensus 262 ~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ip 338 (845)
+|+..+..+..+++|+.|+|++|.|++ +|......+|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|++..|
T Consensus 474 ~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLRALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cccccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 555444445555555555555555553 442223335666666666666665 7777777777777777777775544
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.5e-18 Score=172.53 Aligned_cols=131 Identities=17% Similarity=0.264 Sum_probs=59.4
Q ss_pred cCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCE
Q 003140 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (845)
Q Consensus 103 ~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (845)
+.+++|++|+|++|.++ .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34445555555555555 333 3555555555555555443 1224444555555555555554444444444444444
Q ss_pred EEccCCCCCCCCccccCCCCCcceeeccccc-cccCCCcccCCCCCCcEEEccCCcCC
Q 003140 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNN-LTGYLPPELSELPKLLILQLDNNNFE 239 (845)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (845)
|+|++|++++..+..+..+++|++|++++|+ ++ .++ .+..+++|++|++++|+++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc
Confidence 4444444444334444444444444444444 22 222 3333444444444444443
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.4e-18 Score=171.57 Aligned_cols=154 Identities=17% Similarity=0.273 Sum_probs=105.4
Q ss_pred ccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcc
Q 003140 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (845)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 205 (845)
...+++|++|+|++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677777777777777 555 5777777777777777654 233667777777777777777766666777777777
Q ss_pred eeeccccccccCCCcccCCCCCCcEEEccCCc-CCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccc
Q 003140 206 HMLLDNNNLTGYLPPELSELPKLLILQLDNNN-FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 284 (845)
Q Consensus 206 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N 284 (845)
+|+|++|++++..+..+..+++|++|+|++|+ ++. ++ .+..+++|+.|++++|++++.. .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~--~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD--IM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC--CG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc--cH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCc
Confidence 77777777776666677777777777777776 542 33 5677777777777777776644 5666667777777777
Q ss_pred cCC
Q 003140 285 QLN 287 (845)
Q Consensus 285 ~l~ 287 (845)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 664
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=1.4e-20 Score=219.40 Aligned_cols=199 Identities=21% Similarity=0.241 Sum_probs=151.1
Q ss_pred CCccceeecccccccCCCCccccCccCCCEEEccCCC-------------CCCCCccccCCCCCcceee-ccccccccCC
Q 003140 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-------------ISGQIPPELSRLPSLVHML-LDNNNLTGYL 218 (845)
Q Consensus 153 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~~~ 218 (845)
+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 348 ~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~--- 423 (567)
T 1dce_A 348 DEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD--- 423 (567)
T ss_dssp TTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH---
T ss_pred CccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc---
Confidence 444444444444444 344444444444444443332 4556778888889999998 7777654
Q ss_pred CcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCCc-c
Q 003140 219 PPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-L 297 (845)
Q Consensus 219 p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~-~ 297 (845)
+|..+.+++|.++. ++. ..|+.|+|++|+|++.+. +..+++|+.|+|++|.|+ .+|..+.. .
T Consensus 424 --------~L~~l~l~~n~i~~--l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 --------DLRSKFLLENSVLK--MEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp --------HHHHHHHHHHHHHH--HHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred --------hhhhhhhhcccccc--cCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCC
Confidence 56677788888864 222 358999999999999765 999999999999999999 78876544 4
Q ss_pred ccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccC-ChhhhhhccCCCCcceEEEccCCCCCCCCCCC-----CC
Q 003140 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSF-----NI 371 (845)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i-p~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~-----~~ 371 (845)
+|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.+ |..+..+..| +.|+|++|+|+++|+.. .+
T Consensus 487 ~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L-----~~L~L~~N~l~~~~~~~~~l~~~l 559 (567)
T 1dce_A 487 CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRL-----VLLNLQGNSLCQEEGIQERLAEML 559 (567)
T ss_dssp TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTC-----CEEECTTSGGGGSSSCTTHHHHHC
T ss_pred CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCC-----CEEEecCCcCCCCccHHHHHHHHC
Confidence 89999999999997 56 8999999999999999999887 9998876654 59999999999988754 27
Q ss_pred CCCcEEEe
Q 003140 372 PPNVTVRL 379 (845)
Q Consensus 372 ~~l~~l~l 379 (845)
|.+..|++
T Consensus 560 p~L~~L~l 567 (567)
T 1dce_A 560 PSVSSILT 567 (567)
T ss_dssp TTCSEEEC
T ss_pred cccCccCC
Confidence 88888753
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=6.5e-18 Score=177.67 Aligned_cols=171 Identities=22% Similarity=0.305 Sum_probs=122.0
Q ss_pred ccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCccee
Q 003140 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (845)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 207 (845)
++.+++.+++++|.+++ ++ .+..+++|++|++++|.++. ++ .+..+++|+.|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 57788899999999884 44 57788899999999998884 44 67888888888888888885443 7788888888
Q ss_pred eccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCC
Q 003140 208 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 208 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~ 287 (845)
+|++|++++. |. +.. ++|++|+|++|++++ + ..+.++++|+.|+|++|++++.+ .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~--~-~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD--T-DSLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB--S-GGGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCC--C-hhhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCc
Confidence 8888888753 32 222 677777777777764 2 34666777777777777766542 4555555555555555554
Q ss_pred cCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCccc
Q 003140 288 GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (845)
Q Consensus 288 ~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (845)
+. ..+..+++|+.|++++|++++.
T Consensus 164 -----------------------~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 -----------------------NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -----------------------BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -----------------------ch--HHhccCCCCCEEeCCCCcccCC
Confidence 33 4566778888888888888754
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1e-18 Score=209.78 Aligned_cols=195 Identities=17% Similarity=0.174 Sum_probs=96.5
Q ss_pred CCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEc
Q 003140 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (845)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (845)
+.++.|+|.+|.+.. ++.. .|+.++|+.|.|.+ ++++.|.+. ..+..+..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA-----LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chhh-----HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 457788888888774 3322 34555566655542 234445554 55666677777777777
Q ss_pred cCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCC
Q 003140 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (845)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (845)
++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+.+++|++|+|++|+|+ .+|..|+++++|++|+|++|.|+.
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS--SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC--ccChhhcCCCCCCEEECCCCCCCc
Confidence 777776 56666667777777777777777 66777777777777777777776 457777777777777777777776
Q ss_pred CCCCCCCCCCccEEEcccccCCcCCCCCCCcc--ccCEEEccCCcCCCCcccccCCCCCCCeEecccc
Q 003140 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331 (845)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 331 (845)
.+..|..+++|+.|+|++|.|++.+|..+... .+..|+|++|.+++.+|.. |+.|++++|
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 66667777777777777777777666654332 2234567777777766653 344555555
No 373
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.67 E-value=3.1e-19 Score=210.63 Aligned_cols=296 Identities=16% Similarity=0.150 Sum_probs=159.7
Q ss_pred ceEeEEEecCCCCcccCCCCcc-CCCCccEEEecCC-CCCCC-CcccccccccchhhhccCCCCCCCCCCccC----CCC
Q 003140 82 LHLRELQLLNLNLSGNLSPEIG-RLSYLTILDFMWN-KISGS-IPKEIGNIKSLELLLLNGNELTGSLPEELG----YLP 154 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~-~L~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~ 154 (845)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3688899998888876666665 6888999999888 55432 444455788899999998887765544443 566
Q ss_pred ccceeeccccc--ccC-CCCccccCccCCCEEEccCC-CCCCCCccccCCC-----------------------------
Q 003140 155 KLDRIQIDQNY--ISG-SLPKSFANLNKTRHFHMNNN-SISGQIPPELSRL----------------------------- 201 (845)
Q Consensus 155 ~L~~L~Ls~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l----------------------------- 201 (845)
+|++|+|++|. ++. .++..+.++++|+.|+|++| .+.+ ++..+..+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 88888888886 221 11222344578888888877 2221 33333333
Q ss_pred -------------------------CCcceeeccccccccCCC-cccCCCCCCcEEEccCCcCCCCCCccccccCCCccE
Q 003140 202 -------------------------PSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLK 255 (845)
Q Consensus 202 -------------------------~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~ 255 (845)
++|++|+|++|.+++... ..+..+++|++|++++| +....++.....+++|++
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 445555555554432211 11334445555555544 221111222223455555
Q ss_pred EEccc---------CCCCCCCC-CC-CCCCCccEEEcccccCCcCCCCCCC--ccccCEEEcc--C----CcCCCC----
Q 003140 256 LSLRN---------CSLQGPMP-DL-SRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS--N----NKLTGT---- 312 (845)
Q Consensus 256 L~Ls~---------N~l~~~~~-~l-~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls--~----N~l~~~---- 312 (845)
|++++ +.+++... .+ ..+++|+.|+++.|.+++....... ..+|+.|+|+ + |.++..
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~ 422 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDI 422 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHH
T ss_pred EEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhh
Confidence 55522 22221100 01 1245666666666666543222211 2366677776 3 444421
Q ss_pred -cccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C--CCCCCcEEEecCCcc
Q 003140 313 -IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F--NIPPNVTVRLRGNPF 384 (845)
Q Consensus 313 -~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~--~~~~l~~l~l~~Np~ 384 (845)
++..+..+++|+.|+|++ .+++..+..+.. ..++|+.|+|++|.++..... + .++.++.|++++|++
T Consensus 423 ~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~----~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 423 GFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGT----YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEECCS-SCCHHHHHHHHH----HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhhCCCccEEeecC-cccHHHHHHHHH----hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 122245566666666655 555444444433 123466788888777532111 1 367778888887775
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.4e-16 Score=159.05 Aligned_cols=129 Identities=22% Similarity=0.244 Sum_probs=63.1
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcc-cccccccchhhhccCCCCCCCCCCccCCCCccceeeccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPK-EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (845)
+.|++++++|+ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34566666653 34443332 555555555555543332 244555555555555555544444444444444444444
Q ss_pred ccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
|+|++..+ ..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++
T Consensus 88 N~l~~~~~------------------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISN------------------------KMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECS------------------------SSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCH------------------------HHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 44444333 334444444444444444444444445555555555555555543
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=1.2e-16 Score=159.62 Aligned_cols=105 Identities=15% Similarity=0.264 Sum_probs=54.4
Q ss_pred hhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCc-cccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccc
Q 003140 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPK-SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (845)
Q Consensus 133 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (845)
++|++++|+++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666665 55554432 556666666665544433 255555555555555555544455555555555555555
Q ss_pred cccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 212 NNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 212 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
|+|++..+..|..+++|++|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 116 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISC 116 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCE
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCe
Confidence 55554444444444444444444444443
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.5e-16 Score=154.93 Aligned_cols=136 Identities=20% Similarity=0.260 Sum_probs=84.4
Q ss_pred CCCCCCCcceEecCCCCCCCcceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCC
Q 003140 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (845)
Q Consensus 61 ~~c~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (845)
+.|.|.|+++.|... +++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 3 ~~C~C~~~~l~~~~~-----------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 62 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK-----------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQN 62 (177)
T ss_dssp TTCEEETTEEECCSS-----------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCEeCCCEEEecCC-----------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCC
Confidence 457667888888542 333 233332 257777788777777655556677777777777777
Q ss_pred CCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccccc
Q 003140 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (845)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (845)
++++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 63 QIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 7775555556667777777777777665555556666666666666666664444344555555555555555553
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.7e-16 Score=154.67 Aligned_cols=133 Identities=23% Similarity=0.241 Sum_probs=91.2
Q ss_pred CCCccEEEecCCCCC-CCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEE
Q 003140 105 LSYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (845)
Q Consensus 105 L~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (845)
.++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 366777777777776 66777777777777777777777754 667777777777777777776666666667777777
Q ss_pred EccCCCCCCCC-ccccCCCCCcceeeccccccccCCC---cccCCCCCCcEEEccCCcCC
Q 003140 184 HMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLP---PELSELPKLLILQLDNNNFE 239 (845)
Q Consensus 184 ~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~ 239 (845)
+|++|++++.. +..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776432 2566666666777776666664433 35666666666666666654
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.8e-16 Score=153.20 Aligned_cols=132 Identities=21% Similarity=0.307 Sum_probs=64.8
Q ss_pred Cccceeeccccccc-CCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEE
Q 003140 154 PKLDRIQIDQNYIS-GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQ 232 (845)
Q Consensus 154 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 232 (845)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444444444444 33444444444444444444444432 3444445555555555555544444444455555555
Q ss_pred ccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC----CCCCCCCccEEEcccccCC
Q 003140 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP----DLSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 233 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~l~~l~~L~~L~Ls~N~l~ 287 (845)
|++|++++...+..+..+++|+.|++++|++++.++ .+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 555555432122445555555555555555555544 3555555666666655555
No 379
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.64 E-value=1.6e-18 Score=204.36 Aligned_cols=295 Identities=12% Similarity=0.103 Sum_probs=191.5
Q ss_pred ceEeEEEecCC-CCccc-CCCCccCCCCccEEEecCCCCCCCCccccc----ccccchhhhccCCCCCCCCC-Cc----c
Q 003140 82 LHLRELQLLNL-NLSGN-LSPEIGRLSYLTILDFMWNKISGSIPKEIG----NIKSLELLLLNGNELTGSLP-EE----L 150 (845)
Q Consensus 82 ~~v~~L~L~~~-~l~~~-~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~Ls~N~l~~~~p-~~----~ 150 (845)
.+++.|+|.+| .++.. ++..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|. . .+. .. +
T Consensus 130 ~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~-~~~~~~l~~l~ 207 (594)
T 2p1m_B 130 KNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-S-EVSFSALERLV 207 (594)
T ss_dssp TTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-S-CCCHHHHHHHH
T ss_pred CCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-C-cCCHHHHHHHH
Confidence 46777888777 44432 333344677788888877777655444333 45577777777775 1 111 11 2
Q ss_pred CCCCccceeeccccc--------------------------------------------------ccC----CCCccccC
Q 003140 151 GYLPKLDRIQIDQNY--------------------------------------------------ISG----SLPKSFAN 176 (845)
Q Consensus 151 ~~l~~L~~L~Ls~N~--------------------------------------------------l~~----~~p~~~~~ 176 (845)
..+++|++|+|++|. +.. .++..+..
T Consensus 208 ~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~ 287 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSV 287 (594)
T ss_dssp HHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHH
T ss_pred HhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHh
Confidence 334666666666551 111 12223336
Q ss_pred ccCCCEEEccCCCCCCCC-ccccCCCCCcceeeccccccccC-CCcccCCCCCCcEEEcc---------CCcCCCCCCcc
Q 003140 177 LNKTRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGY-LPPELSELPKLLILQLD---------NNNFEGTTIPA 245 (845)
Q Consensus 177 l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls---------~N~l~~~~~p~ 245 (845)
+++|+.|+|++|.+++.. ...+..+++|++|++++| ++.. ++.....+++|++|+|+ .+.+++..+..
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 789999999999976432 233568899999999998 4422 22223357899999994 35555422222
Q ss_pred ccccCCCccEEEcccCCCCCCCC-CC-CCCCCccEEEcc--c----ccCCcCCCC------CCCccccCEEEccCCcCCC
Q 003140 246 SYSNMSKLLKLSLRNCSLQGPMP-DL-SRIPNLGYLDLS--S----NQLNGSIPP------GRLSLNITTIKLSNNKLTG 311 (845)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~-~l-~~l~~L~~L~Ls--~----N~l~~~ip~------~~~~~~L~~L~Ls~N~l~~ 311 (845)
...++++|+.|+++.|.+++... .+ ..+++|+.|+++ + |.+++...+ .....+|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 23458999999999999876433 23 257899999999 4 556522111 11124899999987 7777
Q ss_pred CcccccCC-CCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCC--CC-CCCCCcEEEecCCcc
Q 003140 312 TIPSNFSG-LPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG--SF-NIPPNVTVRLRGNPF 384 (845)
Q Consensus 312 ~~p~~~~~-l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~--~~-~~~~l~~l~l~~Np~ 384 (845)
..+..+.. +++|++|+|++|.+++..+..+.. ..++|+.|+|++|.++.... .. .++.++.|++++|+.
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~----~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLS----GCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHH----HCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHh----cCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 66666666 899999999999998766655522 13457799999999954222 12 378999999999986
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.2e-15 Score=152.47 Aligned_cols=125 Identities=24% Similarity=0.315 Sum_probs=66.1
Q ss_pred EEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeeccccc
Q 003140 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (845)
Q Consensus 86 ~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 165 (845)
.+++++++|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4666666666 3444332 45666666666665 455556666666666666666665555555555555555555555
Q ss_pred ccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccc
Q 003140 166 ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL 214 (845)
Q Consensus 166 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 214 (845)
|++..+..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5544444455555555555555554433333334444444444444433
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.7e-15 Score=151.17 Aligned_cols=128 Identities=24% Similarity=0.340 Sum_probs=116.7
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
+.+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57999999998 6776664 58999999999998 78899999999999999999999888889999999999999999
Q ss_pred CCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+|++..+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9998888899999999999999999997777779999999999999999975
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=2.1e-16 Score=150.73 Aligned_cols=109 Identities=23% Similarity=0.256 Sum_probs=54.2
Q ss_pred CCccEEEecCCCCC-CCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEE
Q 003140 106 SYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (845)
Q Consensus 106 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (845)
++|++|++++|.++ +.+|..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 44555555555555555555555533 4455555555555555555544444444455555555
Q ss_pred ccCCCCCCC-CccccCCCCCcceeecccccccc
Q 003140 185 MNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTG 216 (845)
Q Consensus 185 L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~ 216 (845)
+++|++++. .+..+..+++|++|++++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~ 127 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN 127 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc
Confidence 555555431 12344444444444444444443
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=8.3e-16 Score=167.53 Aligned_cols=139 Identities=17% Similarity=0.192 Sum_probs=102.3
Q ss_pred cCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCCh-----h---------hH--------HHHHHHHHHHHhcCCCc
Q 003140 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----Q---------GE--------KEFLTEIQFLSRLHHRN 681 (845)
Q Consensus 624 ~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~-----~---------~~--------~~~~~Ei~~l~~l~H~n 681 (845)
.-|.+.+.||+|+||.||+|...+|+.||||+++.... . .. ....+|...|.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999999999999998753210 0 00 11245677777775544
Q ss_pred ee--eEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEc
Q 003140 682 LV--SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD 759 (845)
Q Consensus 682 Iv--~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~ 759 (845)
+. ..+++ . ..+|||||+++++|.++... .....++.|++.+|.|||+.+ ||||||||.|||++
T Consensus 175 v~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEE--E--TTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE
T ss_pred CCCCeeeec--c--CceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEe
Confidence 32 23322 1 23799999999888654321 123467899999999999998 99999999999998
Q ss_pred CCC----------cEEEEecCCcccCCC
Q 003140 760 HKF----------TAKVADFGLSRLAPV 777 (845)
Q Consensus 760 ~~~----------~~kl~DFGla~~~~~ 777 (845)
+++ .+.|+||+-+.....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred CCCCcccccccccceEEEEeCCcccCCC
Confidence 876 389999998765443
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=4.4e-15 Score=146.03 Aligned_cols=130 Identities=22% Similarity=0.247 Sum_probs=94.2
Q ss_pred ccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccC
Q 003140 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (845)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (845)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466788888877 4554443 5788888888888766666677788888888888888766666677777777888877
Q ss_pred CCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
|+|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 77776666666777777777777777775555556667777777777777765
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=6.1e-16 Score=147.54 Aligned_cols=127 Identities=19% Similarity=0.259 Sum_probs=76.9
Q ss_pred ccchhhhccCCCCC-CCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceee
Q 003140 130 KSLELLLLNGNELT-GSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHML 208 (845)
Q Consensus 130 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 208 (845)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56677777777766 56666666677777777777766644 5566666666666666666655555555566666666
Q ss_pred ccccccccC-CCcccCCCCCCcEEEccCCcCCCCCCc---cccccCCCccEEEcc
Q 003140 209 LDNNNLTGY-LPPELSELPKLLILQLDNNNFEGTTIP---ASYSNMSKLLKLSLR 259 (845)
Q Consensus 209 L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~~p---~~~~~l~~L~~L~Ls 259 (845)
+++|++++. .+..+..+++|++|++++|++++ ..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN-LNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG-STTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc-hHHHHHHHHHHCCCcccccCC
Confidence 666666542 22455556666666666666654 122 245555555555544
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=7.5e-15 Score=144.25 Aligned_cols=134 Identities=18% Similarity=0.223 Sum_probs=87.9
Q ss_pred CCccCCCCccEEEecCCCCCCCCcccccccc-cchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCcc
Q 003140 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN 178 (845)
Q Consensus 100 ~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 178 (845)
+.+..+.+|++|+|++|+++. +|. +..+. +|++|+|++|++++. ..+..+++|++|+|++|+|++..+..+..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345667777888888887773 443 44444 777777777777753 5677777777777777777755444557777
Q ss_pred CCCEEEccCCCCCCCCcc--ccCCCCCcceeeccccccccCCCcc----cCCCCCCcEEEccCCcCC
Q 003140 179 KTRHFHMNNNSISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPPE----LSELPKLLILQLDNNNFE 239 (845)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l~ 239 (845)
+|++|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.|++++|.+.
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777777775 4454 56666667777777666663 3332 555666666666666553
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=1.1e-14 Score=158.20 Aligned_cols=213 Identities=15% Similarity=0.180 Sum_probs=105.5
Q ss_pred CCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccc----ccCCCcccCCCCCC
Q 003140 153 LPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNL----TGYLPPELSELPKL 228 (845)
Q Consensus 153 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l----~~~~p~~l~~l~~L 228 (845)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+....+.+|..+.++..+.+..+.. .......|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 55544555566666666666666666544455555555555555544221 11112233333344
Q ss_pred c-EEEccCCcCCCCCCcccc----ccCCCccEEEcccCCCCCCCCCC-CCCCCccEEEcccccCCcCCCCCCCc--cccC
Q 003140 229 L-ILQLDNNNFEGTTIPASY----SNMSKLLKLSLRNCSLQGPMPDL-SRIPNLGYLDLSSNQLNGSIPPGRLS--LNIT 300 (845)
Q Consensus 229 ~-~L~Ls~N~l~~~~~p~~~----~~l~~L~~L~Ls~N~l~~~~~~l-~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~ 300 (845)
+ .+.+....- ++..+ ....++..+.+.++-.......+ ..+++|+.|+|++|+++ .+|...+. .+|+
T Consensus 179 ~~~i~~~~~~~----l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~ 253 (329)
T 3sb4_A 179 ETTIQVGAMGK----LEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNAT-TIPDFTFAQKKYLL 253 (329)
T ss_dssp EEEEEECTTCC----HHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCC-EECTTTTTTCTTCC
T ss_pred ceeEEecCCCc----HHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcc-eecHhhhhCCCCCC
Confidence 3 222221110 01100 01223333333322110000000 12456666666666666 44443322 2666
Q ss_pred EEEccCCcCCCCcccccCCCCCCC-eEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEE
Q 003140 301 TIKLSNNKLTGTIPSNFSGLPRLQ-RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTV 377 (845)
Q Consensus 301 ~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l 377 (845)
.|+|.+| ++...+..|.++++|+ .|++.+ .++...+..|..+ .+|+.+++++|+++.|+.. | ..+.++.+
T Consensus 254 ~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c-----~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 254 KIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGC-----DNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTC-----TTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred EEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCC-----ccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 6666666 5555566677777777 777766 5554444455443 3345777777777777664 2 35666666
Q ss_pred E
Q 003140 378 R 378 (845)
Q Consensus 378 ~ 378 (845)
+
T Consensus 327 y 327 (329)
T 3sb4_A 327 Y 327 (329)
T ss_dssp E
T ss_pred c
Confidence 5
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=6.2e-17 Score=162.50 Aligned_cols=130 Identities=20% Similarity=0.296 Sum_probs=63.3
Q ss_pred CCccEEEecCCCCCCCCcc------cccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccC
Q 003140 106 SYLTILDFMWNKISGSIPK------EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNK 179 (845)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 179 (845)
..++.++|+.+.++|.+|. .|.++++|++|+|++|++++ +| .+..+++|++|+|++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3444444444444444443 45555555555555555553 34 4555555555555555555 34444444455
Q ss_pred CCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCC-cccCCCCCCcEEEccCCcCCC
Q 003140 180 TRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 180 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 5555555555543 22 34445555555555555543211 234555555555555555543
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=6.2e-17 Score=162.53 Aligned_cols=155 Identities=22% Similarity=0.304 Sum_probs=116.9
Q ss_pred ccccccchhhhccCCCCCCCCCC------ccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccC
Q 003140 126 IGNIKSLELLLLNGNELTGSLPE------ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS 199 (845)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 199 (845)
+.....++.++++.+.++|.+|. .+..+++|++|+|++|++++ +| .+.++++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55667888999999999888887 78888889999999888886 56 7888888888888888888 6677777
Q ss_pred CCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC----------
Q 003140 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD---------- 269 (845)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~---------- 269 (845)
.+++|++|+|++|++++ +| .+..+++|++|+|++|++++......+..+++|++|++++|.+++..+.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 77888888888888885 33 5777778888888888886421123677777788888877777665443
Q ss_pred -CCCCCCccEEEcccccCC
Q 003140 270 -LSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 270 -l~~l~~L~~L~Ls~N~l~ 287 (845)
+..+++|+.|| +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 55666777665 45544
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=1.5e-14 Score=142.01 Aligned_cols=132 Identities=23% Similarity=0.265 Sum_probs=72.8
Q ss_pred cccccccchhhhccCCCCCCCCCCccCCCC-ccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCC
Q 003140 125 EIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS 203 (845)
Q Consensus 125 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 203 (845)
.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3556667777777777776 3443 33333 677777777766643 45566666666666666666433333455566
Q ss_pred cceeeccccccccCCCc--ccCCCCCCcEEEccCCcCCCCCCccc----cccCCCccEEEcccCCC
Q 003140 204 LVHMLLDNNNLTGYLPP--ELSELPKLLILQLDNNNFEGTTIPAS----YSNMSKLLKLSLRNCSL 263 (845)
Q Consensus 204 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~~p~~----~~~l~~L~~L~Ls~N~l 263 (845)
|++|+|++|+++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.|++++|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~--~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN--KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG--STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC--cHhHHHHHHHHCCccceeCCCcCCH
Confidence 666666666554 2333 45555555555555555542 3332 44455555555544443
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.46 E-value=4.9e-14 Score=153.22 Aligned_cols=238 Identities=13% Similarity=0.101 Sum_probs=142.0
Q ss_pred CCCccEEEecCCCCC--------------------CCCcccccc--------cccchhhhccCCCCCCCCCCccCCCCcc
Q 003140 105 LSYLTILDFMWNKIS--------------------GSIPKEIGN--------IKSLELLLLNGNELTGSLPEELGYLPKL 156 (845)
Q Consensus 105 L~~L~~L~L~~N~l~--------------------~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 156 (845)
+++|++|||++|++. ...+..|.+ +++|+.|+|.+ .++..-+..|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 566666666666665 122356777 99999999999 8886667789999999
Q ss_pred ceeecccccccCCCCccccCccCCCEEEccCCCC----CCCCccccCCCCCcc-eeeccccc-cccCCCcccCCCCCCcE
Q 003140 157 DRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI----SGQIPPELSRLPSLV-HMLLDNNN-LTGYLPPELSELPKLLI 230 (845)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~l~~l~~L~-~L~L~~N~-l~~~~p~~l~~l~~L~~ 230 (845)
+.|+|++|.++...+..|.++.++..+.+..+.. .......|..+..|+ .+.+.... +...+...-....++..
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999999877888999988888877766322 222234455556666 34443221 00000001112334555
Q ss_pred EEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCC-CCCCCCccEEEcccccCCcCCCCCCCc--cccC-EEEccC
Q 003140 231 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS--LNIT-TIKLSN 306 (845)
Q Consensus 231 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~-~L~Ls~ 306 (845)
+.+.++-... ........+++|+.|+|++|+++..++. |..+++|+.|+|.+| ++ .++...+. .+|+ .|+|.+
T Consensus 207 l~~~~~l~~~-~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~ 283 (329)
T 3sb4_A 207 LTIEGKLDNA-DFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA 283 (329)
T ss_dssp EEEEECCCHH-HHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT
T ss_pred EEEeeeecHH-HHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc
Confidence 5554432210 1111112356666666666666665553 666666666666666 44 34443322 2566 666666
Q ss_pred CcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccC
Q 003140 307 NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (845)
Q Consensus 307 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l 347 (845)
.++...+..|.++++|+.|++++|+++..-+..|..+.+|
T Consensus 284 -~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 284 -SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp -TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCC
T ss_pred -cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcch
Confidence 5665556677777777777777777764444555554443
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=1.2e-12 Score=145.86 Aligned_cols=254 Identities=9% Similarity=0.130 Sum_probs=191.5
Q ss_pred CCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCc
Q 003140 93 NLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPK 172 (845)
Q Consensus 93 ~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 172 (845)
+++..-..+|.+. +|+.+.|..| ++..-..+|.+. +|+.+.|.. .++..-+..|.++++|+.++|++|+++.....
T Consensus 123 ~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 4444445577764 7999999876 765666778774 799999986 66656667899999999999999999855555
Q ss_pred cccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCC
Q 003140 173 SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSK 252 (845)
Q Consensus 173 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~ 252 (845)
.|. ..+|+.+.|.++ ++..-..+|.++++|+.+++.+| ++..-..+|.. .+|+.+.|. |.++. .....|.++++
T Consensus 199 aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~-I~~~aF~~c~~ 272 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN-IASRAFYYCPE 272 (401)
T ss_dssp TTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE-ECTTTTTTCTT
T ss_pred hEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE-EChhHhhCCCC
Confidence 666 689999999854 66566778999999999999875 56555667777 789999994 55653 45678999999
Q ss_pred ccEEEcccCCCC-----CCCC-CCCCCCCccEEEcccccCCcCCCCCCC-c-cccCEEEccCCcCCCCcccccCCCCCCC
Q 003140 253 LLKLSLRNCSLQ-----GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-S-LNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (845)
Q Consensus 253 L~~L~Ls~N~l~-----~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~-~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (845)
|+.+++.+|.+. .... .|..+++|+.++|.+ .++ .++...+ . .+|+.|+|..| ++.....+|.++ +|+
T Consensus 273 L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~ 348 (401)
T 4fdw_A 273 LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIK 348 (401)
T ss_dssp CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCC
T ss_pred CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCC
Confidence 999999998876 2222 488999999999994 476 5555443 3 58999999655 776778889999 999
Q ss_pred eEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCC
Q 003140 325 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (845)
Q Consensus 325 ~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~ 364 (845)
.|++.+|.+....+..|..+. ..+..|.+..|.+..
T Consensus 349 ~l~l~~n~~~~l~~~~F~~~~----~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 349 EVKVEGTTPPQVFEKVWYGFP----DDITVIRVPAESVEK 384 (401)
T ss_dssp EEEECCSSCCBCCCSSCCCSC----TTCCEEEECGGGHHH
T ss_pred EEEEcCCCCcccccccccCCC----CCccEEEeCHHHHHH
Confidence 999999988755455554432 245678888877654
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=2.6e-13 Score=132.33 Aligned_cols=104 Identities=20% Similarity=0.251 Sum_probs=55.4
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
+.|++++++|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455666666553 444332 55555555555555555555555555555555555555444444555555555555555
Q ss_pred cccCCCCccccCccCCCEEEccCCCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSIS 191 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (845)
+|++..+..|.++++|+.|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555444444555555555555555544
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=4.3e-13 Score=130.78 Aligned_cols=86 Identities=20% Similarity=0.295 Sum_probs=38.6
Q ss_pred CccceeecccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEc
Q 003140 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQL 233 (845)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 233 (845)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 33444444444444433444444444444444444444333333444444444444444444433334444444555555
Q ss_pred cCCcCC
Q 003140 234 DNNNFE 239 (845)
Q Consensus 234 s~N~l~ 239 (845)
++|.++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 555444
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=5e-13 Score=130.85 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=64.7
Q ss_pred eEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccc
Q 003140 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (845)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (845)
+.++++++.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45677777664 4555443 66667777777776666666666666666666666666544444566666666666666
Q ss_pred cccCCCCccccCccCCCEEEccCCCCC
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSIS 191 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (845)
+|++..+..|..+++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666444444666666666666666655
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.40 E-value=2.7e-12 Score=142.91 Aligned_cols=263 Identities=11% Similarity=0.102 Sum_probs=203.9
Q ss_pred cCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCE
Q 003140 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (845)
Q Consensus 103 ~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (845)
.....++.+.+.+ .++.+-..+|.+. +|+.++|..| ++..-...|.+ .+|+.+.|.. .++...+.+|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3447788888864 5665666778875 7999999877 66555667777 5799999986 777677789999999999
Q ss_pred EEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCccEEEcccCC
Q 003140 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (845)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (845)
++|.+|+++......|. ..+|+.+.|.++ ++..-..+|.++++|+.+++..| ++. .-..+|.+ .+|+.+.| .++
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~-I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST-IGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE-ECTTTTTT-CCCSEEEE-ETT
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC-cccccccc-CCccEEEe-CCC
Confidence 99999999955555666 689999999855 77677788999999999999876 543 34566777 89999999 566
Q ss_pred CCCCCC-CCCCCCCccEEEcccccCC----cCCCCCCCc--cccCEEEccCCcCCCCcccccCCCCCCCeEecccccCcc
Q 003140 263 LQGPMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (845)
Q Consensus 263 l~~~~~-~l~~l~~L~~L~Ls~N~l~----~~ip~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (845)
++.... .|..+++|+.+++.+|.+. ..++...+. .+|+.++|. |.++......|.++++|+.|.|.+| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 766554 5999999999999998875 124444333 389999999 5588778889999999999999665 664
Q ss_pred cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCC-CCcEEEecCCcc
Q 003140 336 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIP-PNVTVRLRGNPF 384 (845)
Q Consensus 336 ~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~~-~l~~l~l~~Np~ 384 (845)
.-+..|..+ +|+.+++++|.+..++... .++ .+..|++..|..
T Consensus 337 I~~~aF~~~------~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 337 INFSAFNNT------GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp ECTTSSSSS------CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EcHHhCCCC------CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 444555443 5669999999999888763 454 667899887764
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=9.1e-13 Score=129.00 Aligned_cols=80 Identities=21% Similarity=0.360 Sum_probs=38.0
Q ss_pred cEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4444332 44555555555555444444555555555555555444333333344444444444444
Q ss_pred CCC
Q 003140 189 SIS 191 (845)
Q Consensus 189 ~l~ 191 (845)
+|+
T Consensus 92 ~l~ 94 (174)
T 2r9u_A 92 HLK 94 (174)
T ss_dssp CCC
T ss_pred ccc
Confidence 444
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.7e-12 Score=142.11 Aligned_cols=111 Identities=17% Similarity=0.262 Sum_probs=92.7
Q ss_pred CC-CCCCcceEecCCCCCCCcceEeEEEecCC-CCcccCCCCccCCCCccEEEecC-CCCCCCCcccccccccchhhhcc
Q 003140 62 PC-TSNWTGVLCFNTTMDDGYLHLRELQLLNL-NLSGNLSPEIGRLSYLTILDFMW-NKISGSIPKEIGNIKSLELLLLN 138 (845)
Q Consensus 62 ~c-~~~w~Gv~C~~~~~~~~~~~v~~L~L~~~-~l~~~~~~~l~~L~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls 138 (845)
.| .|.|..|.|. ++ +|++ +|. |..+++|++|+|++ |.|++..+..|.+|++|++|+|+
T Consensus 4 ~c~~C~~~~v~~~-----------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~ 64 (347)
T 2ifg_A 4 ACCPHGSSGLRCT-----------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIV 64 (347)
T ss_dssp SSCCSSSSCEECC-----------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECC
T ss_pred cCccccCCEEEcC-----------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECC
Confidence 46 5567777774 33 5664 777 99999999999996 99998888889999999999999
Q ss_pred CCCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCCCCCC
Q 003140 139 GNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG 192 (845)
Q Consensus 139 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 192 (845)
+|+|++..|..|.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.|..
T Consensus 65 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 65 KSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9999988888999999999999999999976666676666 9999999998874
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=1.8e-11 Score=128.13 Aligned_cols=145 Identities=14% Similarity=0.081 Sum_probs=113.6
Q ss_pred HhcCCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEEE
Q 003140 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 622 ~~~~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~E 700 (845)
..+.|.....++.|+.+.||+.... ++.+++|+..........++.+|+++++.+. |..+.++++++.+.+..++|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 3456777888898999999999764 6889999986522222346889999999984 6778899999999899999999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------------------------------------- 741 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 741 (845)
|++|.+|.+.+.. ......++.++++++..||+.
T Consensus 91 ~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 9999999876321 112346788999999999981
Q ss_pred -----------------CCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 742 -----------------ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 742 -----------------~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
..+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 114489999999999998776678999998753
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=8.1e-12 Score=136.63 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=51.8
Q ss_pred EEecCC-CCCCCCcccccccccchhhhccC-CCCCCCCCCccCCCCccceeecccccccCCCCccccCccCCCEEEccCC
Q 003140 111 LDFMWN-KISGSIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (845)
Q Consensus 111 L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (845)
++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.+|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 555 3454 55555555555553 5555444455555555555555555555555555555555555555555
Q ss_pred CCCCCCccccCCCCCcceeeccccccc
Q 003140 189 SISGQIPPELSRLPSLVHMLLDNNNLT 215 (845)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (845)
+|++..+..+..++ |+.|+|.+|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55533333333333 444444444443
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=1e-13 Score=152.88 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=28.4
Q ss_pred ccCEEEccCCcCCCC----cccccCCCCCCCeEecccccCcccCChhhhhh
Q 003140 298 NITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQS 344 (845)
Q Consensus 298 ~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l 344 (845)
+|+.|+|++|.|+.. ++..+...++|++|+|++|.|+......+..+
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 455555555555432 33445556778888888888876555555543
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.9e-13 Score=150.69 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=33.0
Q ss_pred CCCCCCcEEEccCCcCCCC---CCccccccCCCccEEEcccCCCCCCCC-----CCCCCCCccEEEcccccCC
Q 003140 223 SELPKLLILQLDNNNFEGT---TIPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~ 287 (845)
..+++|++|+|++|.+++. .++..+...++|+.|+|++|.++.... .+...++|++|+|++|.|+
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 3444555555555554321 113334455556666666666543211 1334456777777777665
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.07 E-value=1.8e-10 Score=120.15 Aligned_cols=129 Identities=21% Similarity=0.152 Sum_probs=98.3
Q ss_pred cccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc--eeeEEEEEeeCCeEEEEEEcCCCCCHHHH
Q 003140 633 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQ 710 (845)
Q Consensus 633 G~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~g~~~~~~~~~LV~E~~~~gsL~~~ 710 (845)
+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 456669999998877888999997654 2245788999999985444 456889888888899999999998884
Q ss_pred HhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 003140 711 LSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------------------------------------------------ 742 (845)
Q Consensus 711 l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------------ 742 (845)
... .+ ...++.++++.+..||+..
T Consensus 104 ~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 211 11 2356777888888888642
Q ss_pred -------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 743 -------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 743 -------~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.+.++|||++|.||++++++.+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12289999999999998877778999998754
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.01 E-value=9.7e-09 Score=114.18 Aligned_cols=279 Identities=13% Similarity=0.012 Sum_probs=147.2
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
.++++.+.. +++..-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+- ...-...|.+...++.....
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l-~~i~~~aF~~~~~~~~~~~~ 148 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLML-KSIGVEAFKGCDFKEITIPE 148 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTC-CEECTTTTTTCCCSEEECCT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCce-eeecceeeecccccccccCc
Confidence 466666643 355444556777777777777543 443344556666666666554331 11112222222111111111
Q ss_pred cccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCC----------------
Q 003140 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP---------------- 226 (845)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~---------------- 226 (845)
. +......+|.++++|+.+.+.++... .....|..+++|+.+.+..| ++......|.++.
T Consensus 149 ~--~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~ 224 (394)
T 4fs7_A 149 G--VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGD 224 (394)
T ss_dssp T--CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECT
T ss_pred c--ccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeeh
Confidence 1 11112234455555555555433221 22334444555555555443 2222223344444
Q ss_pred ------CCcEEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCC--Cccc
Q 003140 227 ------KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGR--LSLN 298 (845)
Q Consensus 227 ------~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~--~~~~ 298 (845)
+|+.+.+..+. +. .....|.++.+|+.+.+..+..+-....+.....|+.+.+..+.+ +... ...+
T Consensus 225 ~~~~~~~l~~i~ip~~~-~~-i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~~~~F~~~~~ 298 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDSF-TE-LGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----PEKTFYGCSS 298 (394)
T ss_dssp TTTTTCCCCEEEECTTC-CE-ECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----CTTTTTTCTT
T ss_pred hhcccCCCceEEECCCc-ee-cccccccccccceeEEcCCCcceeeccccccccccceeccCceee----cccccccccc
Confidence 45555443322 11 223345666677777776665443344566667777776665543 2322 2347
Q ss_pred cCEEEccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcE
Q 003140 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVT 376 (845)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~ 376 (845)
|+.+.+.++ ++.....+|.++.+|+.++|.++ ++..-...|..+. +|+.+++..| ++.|... + ..+.|++
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~-----~L~~i~lp~~-l~~I~~~aF~~C~~L~~ 370 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT-----SLSNINFPLS-LRKIGANAFQGCINLKK 370 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT-----TCCEECCCTT-CCEECTTTBTTCTTCCE
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC-----CCCEEEECcc-ccEehHHHhhCCCCCCE
Confidence 888888765 66566778889999999999754 6533344555443 4557888776 8887765 3 4678888
Q ss_pred EEecCC
Q 003140 377 VRLRGN 382 (845)
Q Consensus 377 l~l~~N 382 (845)
+++..|
T Consensus 371 i~lp~~ 376 (394)
T 4fs7_A 371 VELPKR 376 (394)
T ss_dssp EEEEGG
T ss_pred EEECCC
Confidence 887544
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.94 E-value=1.5e-09 Score=119.24 Aligned_cols=141 Identities=23% Similarity=0.326 Sum_probs=106.0
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEcc--CCC-hhhHHHHHHHHHHHHhcC--CCceeeEEEEEeeC---CeEEEEEE
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGS-LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE---GEQMLVYE 700 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~--~~~-~~~~~~~~~Ei~~l~~l~--H~nIv~l~g~~~~~---~~~~LV~E 700 (845)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678999999999988754 577888765 322 123457888999999996 45678999998776 45899999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 742 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 742 (845)
|++|..+.+. ....++...+..++.++++.|..||+..
T Consensus 122 ~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9998776431 1223678888899999999999999731
Q ss_pred -----------------CCCeEecCCCCCCEEEcCCCc--EEEEecCCccc
Q 003140 743 -----------------DPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 774 (845)
Q Consensus 743 -----------------~~~iiHrDLk~~NILl~~~~~--~kl~DFGla~~ 774 (845)
.+.++|||+++.|||++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245899999999999997753 68999998864
No 406
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.87 E-value=2e-09 Score=115.15 Aligned_cols=193 Identities=17% Similarity=0.161 Sum_probs=122.9
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCc--eeeEEEEEeeCC---eEEEEEEcC
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRN--LVSLVGYCDEEG---EQMLVYEFM 702 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~n--Iv~l~g~~~~~~---~~~LV~E~~ 702 (845)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+.+......+ ..++|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999863 45888885432 34567899999999883 333 445555544333 348899999
Q ss_pred CCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 003140 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------------------------------------- 741 (845)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 741 (845)
+|.++..... ..++...+..++.++++.+..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988865332 1356777778888888888888861
Q ss_pred --------------CCCCeEecCCCCCCEEEcC--CCcEEEEecCCcccCCCC-CCCCcccc------ceeecccCCCCc
Q 003140 742 --------------ADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVP-DIEGIVPA------HVSTVVKGTPGY 798 (845)
Q Consensus 742 --------------~~~~iiHrDLk~~NILl~~--~~~~kl~DFGla~~~~~~-~~~~~~~~------~~~~~~~gt~~y 798 (845)
..+.++|+|+++.||++++ +..+.|+||+.+..-... |....... ..........+.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 556889999988653210 00000000 000000000111
Q ss_pred cc-hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 799 LD-PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 799 ~a-PE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
.. |+..... ....+.|++|.++|++.+|..+|.
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 12 2221111 223689999999999999998873
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.81 E-value=6.1e-08 Score=107.68 Aligned_cols=179 Identities=9% Similarity=-0.055 Sum_probs=122.6
Q ss_pred cccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecccccccCCCCccc
Q 003140 95 SGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSF 174 (845)
Q Consensus 95 ~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 174 (845)
+..-..+|.++++|+.+.|.. .++.+-..+|.++++|+.++|.++ ++..-...|.++++|+.+.+..+ +......+|
T Consensus 60 tsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF 136 (394)
T 4fs7_A 60 VSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAF 136 (394)
T ss_dssp EEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTT
T ss_pred eEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceee
Confidence 333456899999999999974 577566778999999999999865 55455677899999999888765 443556677
Q ss_pred cCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCcc
Q 003140 175 ANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLL 254 (845)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 254 (845)
.++..++......... ....+|..+++|+.+.+.++. .......|..+.+|+.+.+..| ++. .....|.++..|+
T Consensus 137 ~~~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~-I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 137 KGCDFKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKI-IRDYCFAECILLE 211 (394)
T ss_dssp TTCCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCE-ECTTTTTTCTTCC
T ss_pred ecccccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceE-eCchhhccccccc
Confidence 7776544444333322 334678899999999998764 3355667899999999999877 432 3445677778888
Q ss_pred EEEcccCCCCCCCCCCCCCCCccEEEcc
Q 003140 255 KLSLRNCSLQGPMPDLSRIPNLGYLDLS 282 (845)
Q Consensus 255 ~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls 282 (845)
.+.+..+...- ........+|+.+.+.
T Consensus 212 ~i~~~~~~~~i-~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 212 NMEFPNSLYYL-GDFALSKTGVKNIIIP 238 (394)
T ss_dssp BCCCCTTCCEE-CTTTTTTCCCCEEEEC
T ss_pred eeecCCCceEe-ehhhcccCCCceEEEC
Confidence 77766554321 1112223455555544
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=1.1e-09 Score=119.72 Aligned_cols=141 Identities=18% Similarity=0.243 Sum_probs=73.2
Q ss_pred ccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccc--cCCCccEEEccc--CCCCCC------
Q 003140 197 ELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS--NMSKLLKLSLRN--CSLQGP------ 266 (845)
Q Consensus 197 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~------ 266 (845)
.+..+|+|+.|+|++|.-. .++. +. +++|+.|+|..+.+.. .....+. .+++|+.|+|+. |...+.
T Consensus 167 ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 167 VLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 3444556666666555211 1222 22 5566666666666543 1222222 566666666642 111111
Q ss_pred CCCC--CCCCCccEEEcccccCCcCCCCC----CCccccCEEEccCCcCCCC----cccccCCCCCCCeEecccccCccc
Q 003140 267 MPDL--SRIPNLGYLDLSSNQLNGSIPPG----RLSLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGS 336 (845)
Q Consensus 267 ~~~l--~~l~~L~~L~Ls~N~l~~~ip~~----~~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 336 (845)
.+.+ ..+++|+.|+|++|.+.+..+.. ....+|++|+|+.|.|++. ++..+..+++|+.|+|++|.++..
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 0112 24677778888777776432211 1234677777777777653 233334567788888887777644
Q ss_pred CChhh
Q 003140 337 IPSSI 341 (845)
Q Consensus 337 ip~~l 341 (845)
.-..+
T Consensus 323 ~~~~l 327 (362)
T 2ra8_A 323 MKKEL 327 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 33333
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.78 E-value=1.1e-09 Score=119.64 Aligned_cols=182 Identities=12% Similarity=0.220 Sum_probs=90.6
Q ss_pred ceEeEEEecCCCCcc-c-------CCCCccCCCCccEEEecCCCCC---------CCCcccccccccchhhhccCCC-CC
Q 003140 82 LHLRELQLLNLNLSG-N-------LSPEIGRLSYLTILDFMWNKIS---------GSIPKEIGNIKSLELLLLNGNE-LT 143 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~-~-------~~~~l~~L~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~-l~ 143 (845)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.+...+..+++|+.|+|++|. +.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 357777777655442 1 1334566778888887654321 1222333445555555555542 11
Q ss_pred CCCCCccCCCCccceeecccccccCCCCcccc--CccCCCEEEccC--CCCCCCCccccCCCCCcceeeccccccccCCC
Q 003140 144 GSLPEELGYLPKLDRIQIDQNYISGSLPKSFA--NLNKTRHFHMNN--NSISGQIPPELSRLPSLVHMLLDNNNLTGYLP 219 (845)
Q Consensus 144 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 219 (845)
++. + .+++|+.|+|..+.++......+. .+++|+.|+|+. |...+.. .+. .+.
T Consensus 187 --l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~------------------~~~-~l~ 243 (362)
T 2ra8_A 187 --IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDG------------------DMN-VFR 243 (362)
T ss_dssp --CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCS------------------CGG-GTG
T ss_pred --ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccch------------------hHH-HHH
Confidence 122 2 245555555555444322222221 344454444431 1111000 000 000
Q ss_pred ccc--CCCCCCcEEEccCCcCCCCCCcccc---ccCCCccEEEcccCCCCCC-----CCCCCCCCCccEEEcccccCC
Q 003140 220 PEL--SELPKLLILQLDNNNFEGTTIPASY---SNMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLN 287 (845)
Q Consensus 220 ~~l--~~l~~L~~L~Ls~N~l~~~~~p~~~---~~l~~L~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l~ 287 (845)
..+ ..+++|++|+|.+|.+.+ ..+..+ ..+++|+.|+|+.|.+++. ...+..+++|+.|+|++|.|+
T Consensus 244 ~~l~~~~~p~Lr~L~L~~~~i~~-~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 244 PLFSKDRFPNLKWLGIVDAEEQN-VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGSCTTTCTTCCEEEEESCTTHH-HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHhcCCCCCcCEEeCCCCCCch-HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 112 235677777777777653 122222 2467788888888777652 122345678888888888776
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.69 E-value=4.2e-07 Score=100.84 Aligned_cols=282 Identities=13% Similarity=0.139 Sum_probs=147.8
Q ss_pred EeEEEecCCCCcccCCCCccCCCCccEEEecCCC---CCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceee
Q 003140 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK---ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (845)
Q Consensus 84 v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (845)
++.+.+.. +++..-..+|.++++|+.+.+..|. ++..-..+|.++.+|+.+.+..+ ++..-...|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 45555543 2444444567777777777776653 44344556777777777776654 3324445567777777777
Q ss_pred cccccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCC
Q 003140 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (845)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (845)
+..+ ++......|.++.+|+.+.+.++ +...-..+|.. ..|+.+.+..+-.. .....|..+.+|.......+....
T Consensus 144 lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred ccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 7643 33244556777777777777654 33222334433 45666666544322 334456666666666554443321
Q ss_pred CCCcccc--------------ccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCC--ccccCEEE
Q 003140 241 TTIPASY--------------SNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIK 303 (845)
Q Consensus 241 ~~~p~~~--------------~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~ 303 (845)
....+ .....+..+.+. +.++.... .|..+.+|+.+.+.++..+ +....+ ..+|+.+.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 220 --IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIE 294 (394)
T ss_dssp --SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEE
T ss_pred --ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce--ecCccccccccccccc
Confidence 11100 011112222221 11111111 3556667777776655432 333222 23677777
Q ss_pred ccCCcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecC
Q 003140 304 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRG 381 (845)
Q Consensus 304 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~ 381 (845)
+. +.++......|.++.+|+.++|..+ ++..-...|..+. +|+.+.|..+ ++.|... | ....|+.+++.+
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~-----~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE-----QLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT-----TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC-----CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 65 4455455566777777777777654 4422233444333 3446666533 6666554 3 356777777777
Q ss_pred Ccc
Q 003140 382 NPF 384 (845)
Q Consensus 382 Np~ 384 (845)
|..
T Consensus 367 ~~~ 369 (394)
T 4gt6_A 367 SRS 369 (394)
T ss_dssp CHH
T ss_pred cee
Confidence 653
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=1.5e-10 Score=120.18 Aligned_cols=78 Identities=27% Similarity=0.374 Sum_probs=36.7
Q ss_pred ccCCCEEEccCCCCCC--CCccccCCCCCcceeeccccccccCCCcccCCCC--CCcEEEccCCcCCCCCCc-------c
Q 003140 177 LNKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP--KLLILQLDNNNFEGTTIP-------A 245 (845)
Q Consensus 177 l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~~p-------~ 245 (845)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+ ..| .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~-~~~~~~~y~~~ 245 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD-TFRDQSTYISA 245 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG-GCSSHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc-ccCcchhHHHH
Confidence 4444444444444443 2223334445555555555555433 1222222 56666666666654 222 2
Q ss_pred ccccCCCccEEE
Q 003140 246 SYSNMSKLLKLS 257 (845)
Q Consensus 246 ~~~~l~~L~~L~ 257 (845)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 355666666665
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.59 E-value=2.5e-06 Score=94.57 Aligned_cols=267 Identities=11% Similarity=0.100 Sum_probs=180.5
Q ss_pred CCCccCCC-CccEEEecCCCCCCCCcccccccccchhhhccCCC---CCCCCCCccCCCCccceeecccccccCCCCccc
Q 003140 99 SPEIGRLS-YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE---LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSF 174 (845)
Q Consensus 99 ~~~l~~L~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 174 (845)
..+|.+.. .|+.+.|-. .++.+-..+|.++++|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 45677764 599999975 4776667889999999999998774 55444567888999999988765 454556788
Q ss_pred cCccCCCEEEccCCCCCCCCccccCCCCCcceeeccccccccCCCcccCCCCCCcEEEccCCcCCCCCCccccccCCCcc
Q 003140 175 ANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLL 254 (845)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 254 (845)
.++.+|+.+.+..+. .......|....+|+.+.+.++ ++..-..+|.. .+|+.+.+..+-.. .....|.++.+|.
T Consensus 134 ~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~--i~~~af~~c~~l~ 208 (394)
T 4gt6_A 134 HHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR--IGTNAFSECFALS 208 (394)
T ss_dssp TTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE--ECTTTTTTCTTCC
T ss_pred hhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc--cccchhhhccccc
Confidence 999999999997553 3345667888899999999765 44344445544 67999998766543 3456788888888
Q ss_pred EEEcccCCCCCCCCC--------------CCCCCCccEEEcccccCCcCCCCCCC--ccccCEEEccCCcCCCCcccccC
Q 003140 255 KLSLRNCSLQGPMPD--------------LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFS 318 (845)
Q Consensus 255 ~L~Ls~N~l~~~~~~--------------l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls~N~l~~~~p~~~~ 318 (845)
......+........ +.....+..+.+..+ ++ .+....+ ..+|+.+.+.++..+ .....|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~-~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~ 285 (394)
T 4gt6_A 209 TITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VA-RIETHAFDSCAYLASVKMPDSVVS-IGTGAFM 285 (394)
T ss_dssp EEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EE-EECTTTTTTCSSCCEEECCTTCCE-ECTTTTT
T ss_pred eecccccccccccceeecccccccccccccccccccceEEcCCc-ce-EcccceeeecccccEEecccccce-ecCcccc
Confidence 887776655432221 111223333433222 22 1222222 247999999876543 5667899
Q ss_pred CCCCCCeEecccccCcccCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCC
Q 003140 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGN 382 (845)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~-~-~~~~l~~l~l~~N 382 (845)
+++.|+.+.+. +.++..-...|..+ .+|+.++|..| ++.|... | ....|+++.+..+
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c-----~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGC-----ISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTC-----TTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cccccccccCC-CcccccCceeecCC-----CCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 99999999996 45653333345444 44568999754 8888765 4 4688999998654
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.52 E-value=1.9e-07 Score=98.64 Aligned_cols=140 Identities=19% Similarity=0.186 Sum_probs=94.0
Q ss_pred CCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCC---ceeeEEEEEeeCCeEEEEEEcCCC
Q 003140 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSN 704 (845)
Q Consensus 628 ~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~LV~E~~~~ 704 (845)
..+.|+.|.++.||++...+|+.++||+...........|.+|++.|+.+++. .+++++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35679999999999999889999999996543333345789999999999765 577888764 36899999999
Q ss_pred CCHH--------HH---HhccCCC-------------------CCCHHHHHH--------------------HHHHHHHH
Q 003140 705 GTLR--------DQ---LSAKSKE-------------------PLGFAMRLS--------------------IALGSSRG 734 (845)
Q Consensus 705 gsL~--------~~---l~~~~~~-------------------~l~~~~~~~--------------------i~~~ia~g 734 (845)
+++. .. +|..... .-+|..... ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 8742 11 2322111 013332110 01111122
Q ss_pred HHHHH----hCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 735 ILYLH----TEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 735 L~yLH----~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23332 2345679999999999999984 5889999 654
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.46 E-value=6.6e-07 Score=96.27 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=100.7
Q ss_pred CCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCC----CceeeEEEEEeeCCeEEEEEE
Q 003140 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYCDEEGEQMLVYE 700 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H----~nIv~l~g~~~~~~~~~LV~E 700 (845)
.....+.++.|....||+. |..+++|+... ......+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5556788999999999997 66788887643 2224568899999988865 234455555 56689999
Q ss_pred cCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 003140 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 742 (845)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 742 (845)
|++|.++..... ..++...+..++.++++.+..||+..
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864321 12556666777778888888887432
Q ss_pred ----------------------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 743 ----------------------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 743 ----------------------~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.+.++|+|+++.||+++.+..+.|+||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 22359999999999999976789999999864
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=2.1e-08 Score=104.05 Aligned_cols=105 Identities=18% Similarity=0.260 Sum_probs=62.0
Q ss_pred ccccccchh--hhccCCCCC---CCCCCccCCCCccceeecccccccC--CCCccccCccCCCEEEccCCCCCCCCcccc
Q 003140 126 IGNIKSLEL--LLLNGNELT---GSLPEELGYLPKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSISGQIPPEL 198 (845)
Q Consensus 126 ~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (845)
|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444555655 566666433 1111122456677777777777776 3445666777777777777777643 223
Q ss_pred CCCC--CcceeeccccccccCCCc-------ccCCCCCCcEEE
Q 003140 199 SRLP--SLVHMLLDNNNLTGYLPP-------ELSELPKLLILQ 232 (845)
Q Consensus 199 ~~l~--~L~~L~L~~N~l~~~~p~-------~l~~l~~L~~L~ 232 (845)
..+. +|++|+|++|.+.+.+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 777777777777765542 245566776665
No 416
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=2.4e-06 Score=89.25 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=97.4
Q ss_pred cccccCce-EEEEEEeC-CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEEEcCCCCCH
Q 003140 631 QIGQGGYG-KVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (845)
Q Consensus 631 ~LG~G~fG-~Vy~~~~~-~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~E~~~~gsL 707 (845)
.+..|..| .||+.... ++..+.+|+.... ...++.+|.+.|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34555555 68987765 4677888986542 3457888999998884 44577899999999999999999999888
Q ss_pred HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 003140 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--------------------------------------------- 742 (845)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------- 742 (845)
.+..... ......++.++++.|.-||+..
T Consensus 108 ~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 7755321 1123345556666666666421
Q ss_pred ----------CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 743 ----------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 743 ----------~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.+.++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12378999999999999887778999998754
No 417
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=3.2e-06 Score=90.20 Aligned_cols=136 Identities=21% Similarity=0.204 Sum_probs=93.2
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCC---ceeeEEEEEe-eCCeEEEEEEcCCC
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCD-EEGEQMLVYEFMSN 704 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~---nIv~l~g~~~-~~~~~~LV~E~~~~ 704 (845)
.+.++.|....||+. |..+++|+.. .......+.+|.++|+.+.+. .+.+.+.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888999999987 5667888743 233456789999999999642 3567777764 45567899999999
Q ss_pred CCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 003140 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------------------------------------------- 741 (845)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 741 (845)
..+.+.... .++...+..++.++++.|..||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 887653211 123334444444444444444432
Q ss_pred --------------CCCCeEecCCCCCCEEEcC---CCc-EEEEecCCccc
Q 003140 742 --------------ADPPVFHRDIKASNILLDH---KFT-AKVADFGLSRL 774 (845)
Q Consensus 742 --------------~~~~iiHrDLk~~NILl~~---~~~-~kl~DFGla~~ 774 (845)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 58999998764
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.31 E-value=3e-07 Score=84.56 Aligned_cols=69 Identities=20% Similarity=0.280 Sum_probs=50.9
Q ss_pred eEecccccCc-ccCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCCccccCCCCCC
Q 003140 325 RLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDD 400 (845)
Q Consensus 325 ~L~L~~N~l~-~~ip~~l~~l~~l~~~~l~~L~ls~N~l~~i~~~~--~~~~l~~l~l~~Np~~c~~~~~~~~~~~~~~ 400 (845)
.++.+++.|+ ..+|..+ ..+++.|+|++|+|+.++... .++.++.|+|.+|||.|||.+.+|..|....
T Consensus 12 ~v~Cs~~~L~~~~vP~~l-------p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~ 83 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF-------PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGR 83 (130)
T ss_dssp EEECCSSCCCTTTSCSCC-------CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTS
T ss_pred EEEeCCCCCccccCCCCC-------CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhC
Confidence 4556666654 3455433 124567888888888888764 4888999999999999999999999887543
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.27 E-value=3.2e-08 Score=97.44 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=36.0
Q ss_pred CCCccCCCCccEEEecCC-CCCCC----CcccccccccchhhhccCCCCCCC----CCCccCCCCccceeeccccccc
Q 003140 99 SPEIGRLSYLTILDFMWN-KISGS----IPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYIS 167 (845)
Q Consensus 99 ~~~l~~L~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 167 (845)
...+...+.|++|+|++| .+... +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 344566777777777777 76532 223344445566666666665521 1122223344555555555544
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.19 E-value=1.1e-07 Score=93.59 Aligned_cols=14 Identities=36% Similarity=0.223 Sum_probs=6.4
Q ss_pred cccccchhhhccCC
Q 003140 127 GNIKSLELLLLNGN 140 (845)
Q Consensus 127 ~~l~~L~~L~Ls~N 140 (845)
...++|++|+|++|
T Consensus 33 ~~~~~L~~L~L~~n 46 (185)
T 1io0_A 33 NNDPDLEEVNLNNI 46 (185)
T ss_dssp TTCTTCCEEECTTC
T ss_pred hcCCCCCEEEecCC
Confidence 33444444444444
No 421
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.16 E-value=6.4e-05 Score=82.57 Aligned_cols=239 Identities=10% Similarity=0.035 Sum_probs=110.6
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeecc
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (845)
+++++.+.. +++..-..+|.++.+|+.++|.. .++.+-..+|.++ +|+.+.+..+ ++..-...|.. .+|+.+.+.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCC
Confidence 455555543 45544456778888888888864 3554445566665 5666665543 34222333433 467777776
Q ss_pred cccccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccccccc------------CCCcccCCCCCCcE
Q 003140 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG------------YLPPELSELPKLLI 230 (845)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~------------~~p~~l~~l~~L~~ 230 (845)
.+- +......|.+. +|+.+.+..+ ++......+.....++.+.+..+.... .....+.....+..
T Consensus 122 ~~~-~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 122 GAT-TEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp TTC-CEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred Ccc-ccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 542 21223334433 4555544332 222333445555555555544332210 11112233333444
Q ss_pred EEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCCCCCCCCCccEEEcccccCCcCCCCCCC--ccccCEEEccCCc
Q 003140 231 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNK 308 (845)
Q Consensus 231 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~--~~~L~~L~Ls~N~ 308 (845)
+.+..+... .....+....+|+.+.+..+--.-....+....+|+.+.+..+ ++ .+....+ ..+|+.+.+..+
T Consensus 199 ~~~~~~~~~--i~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 199 FTIPSTVKT--VTAYGFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EECCTTCCE--ECTTTTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-
T ss_pred cccccceeE--EeecccccccccceeeeccceeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-
Confidence 443332221 2223344445555555543321111123445555555555444 32 2222222 124555555433
Q ss_pred CCCCcccccCCCCCCCeEecccccCc
Q 003140 309 LTGTIPSNFSGLPRLQRLFIANNSLS 334 (845)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (845)
+.......|.++.+|+.+.+.++.++
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred ceeccccccccccccccccccccccc
Confidence 33333445555666666666555555
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.16 E-value=7e-06 Score=89.74 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=90.0
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc--eeeEEEEEeeC-CeEEEEEEcCCCC
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEE-GEQMLVYEFMSNG 705 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~g~~~~~-~~~~LV~E~~~~g 705 (845)
.+.++.|....+|+... +|..+++|..... ..+..|.++++.+.... +.++++++... +..++||||+++.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 56789999999999876 5788999987542 25888999999886433 56778777654 6789999999975
Q ss_pred CHHH---------------H---HhccCCCC---------------CCHHHH---------------------HHHHHHH
Q 003140 706 TLRD---------------Q---LSAKSKEP---------------LGFAMR---------------------LSIALGS 731 (845)
Q Consensus 706 sL~~---------------~---l~~~~~~~---------------l~~~~~---------------------~~i~~~i 731 (845)
++.+ . ||...... -.|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 5431 1 11111000 011111 0111112
Q ss_pred HHHHHHHHhC-CCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 732 SRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 732 a~gL~yLH~~-~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
...++++... ..+.++|+|+++.||++++++.+.|+||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222233211 125589999999999998887889999998865
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=2.9e-06 Score=92.68 Aligned_cols=79 Identities=4% Similarity=-0.010 Sum_probs=55.4
Q ss_pred Cccc-cccCceEEEEEEeC-------CCcEEEEEEccCCC---hhhHHHHHHHHHHHHhcC-C--CceeeEEEEEeeC--
Q 003140 629 STQI-GQGGYGKVYKGILP-------DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-H--RNLVSLVGYCDEE-- 692 (845)
Q Consensus 629 ~~~L-G~G~fG~Vy~~~~~-------~g~~vAVK~~~~~~---~~~~~~~~~Ei~~l~~l~-H--~nIv~l~g~~~~~-- 692 (845)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88989999988764 26778888865422 111245778888888884 3 3567888887665
Q ss_pred -CeEEEEEEcCCCCCH
Q 003140 693 -GEQMLVYEFMSNGTL 707 (845)
Q Consensus 693 -~~~~LV~E~~~~gsL 707 (845)
+..++||||++|..+
T Consensus 105 ~g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVP 120 (357)
T ss_dssp TSSCEEEEECCCCBCC
T ss_pred cCCceEEEEecCCCCh
Confidence 356899999988654
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.96 E-value=0.00043 Score=75.87 Aligned_cols=251 Identities=10% Similarity=0.043 Sum_probs=151.9
Q ss_pred ceEeEEEecCCCCcccCCCCccCCCCccEEEecCCCCCCCCcccccccccchhhhccCCCCCCCCCCccCCCCccceeec
Q 003140 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (845)
Q Consensus 82 ~~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (845)
..++.++|.. +++..-..+|.+. +|+.+.+..+ ++..-...|.. .+|+.+.+..+-.. .-...|.+ .+|+.+.+
T Consensus 69 ~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~~~-i~~~~F~~-~~l~~~~~ 142 (379)
T 4h09_A 69 YNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGATTE-IGNYIFYN-SSVKRIVI 142 (379)
T ss_dssp TTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTCCE-ECTTTTTT-CCCCEEEE
T ss_pred CCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcccc-cccccccc-ceeeeeec
Confidence 4688888864 4665555677776 6888887643 55344455655 47888888765322 33334444 35666666
Q ss_pred ccccccCCCCccccCccCCCEEEccCCCCCC------------CCccccCCCCCcceeeccccccccCCCcccCCCCCCc
Q 003140 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISG------------QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (845)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 229 (845)
..+ ++......|.++.+++.+.+..+.... .....+.....+..+.+..+.- ......+....+|+
T Consensus 143 ~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~ 220 (379)
T 4h09_A 143 PKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLK 220 (379)
T ss_dssp CTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCS
T ss_pred cce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccccccccccee-EEeecccccccccc
Confidence 543 343556677888888888776654321 1112233344455554443322 23345566677788
Q ss_pred EEEccCCcCCCCCCccccccCCCccEEEcccCCCCCCCC-CCCCCCCccEEEcccccCCcCCCCCCCc--cccCEEEccC
Q 003140 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSN 306 (845)
Q Consensus 230 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~~--~~L~~L~Ls~ 306 (845)
.+.+..+- +. .....|.++..|+.+.+..+ ++.... .+..+.+|+.+.+..+ ++ .++...+. .+|+.+.+.+
T Consensus 221 ~i~~~~~~-~~-i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~ 295 (379)
T 4h09_A 221 KITITSGV-TT-LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDN 295 (379)
T ss_dssp EEECCTTC-CE-ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECC
T ss_pred eeeeccce-eE-EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccc
Confidence 88876553 21 33456777788888888665 444333 4677778888887654 44 34443332 4788888888
Q ss_pred CcCCCCcccccCCCCCCCeEecccccCcccCChhhhhhcc
Q 003140 307 NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (845)
Q Consensus 307 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~l~~l~~ 346 (845)
+.++......|.++.+|+.+.|..+ ++..-..+|..+.+
T Consensus 296 ~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 334 (379)
T 4h09_A 296 SAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKA 334 (379)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCC
Confidence 8887677778888888888888654 55333344544433
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.91 E-value=2.7e-05 Score=86.32 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=49.8
Q ss_pred CccccccCceEEEEEEeC-CCcEEEEEEccCCCh-------hhHHHHHHHHHHHHhcCC--C-ceeeEEEEEeeCCeEEE
Q 003140 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHH--R-NLVSLVGYCDEEGEQML 697 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~-~g~~vAVK~~~~~~~-------~~~~~~~~Ei~~l~~l~H--~-nIv~l~g~~~~~~~~~L 697 (845)
.+.||.|.++.||++... +++.++||....... ....++..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457999999999999764 468899997653221 123456788888888732 3 34456654 3445689
Q ss_pred EEEcCCCC
Q 003140 698 VYEFMSNG 705 (845)
Q Consensus 698 V~E~~~~g 705 (845)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.86 E-value=3.9e-05 Score=82.83 Aligned_cols=140 Identities=19% Similarity=0.199 Sum_probs=80.1
Q ss_pred ccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC--CCceeeEEE------EEeeCCeEEEEEEc
Q 003140 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--HRNLVSLVG------YCDEEGEQMLVYEF 701 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~--H~nIv~l~g------~~~~~~~~~LV~E~ 701 (845)
+.|+.|..+.||+....+| .+++|+.... ..++..|.++++.+. .-.+.+++. +....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987655 4889988752 223344555555442 112333332 12346778999999
Q ss_pred CCCCCHH-----------H---HHhcc-C----C-------CCCCHHHHH------------------------------
Q 003140 702 MSNGTLR-----------D---QLSAK-S----K-------EPLGFAMRL------------------------------ 725 (845)
Q Consensus 702 ~~~gsL~-----------~---~l~~~-~----~-------~~l~~~~~~------------------------------ 725 (845)
++|..+. . .+|.. . . ..-.|....
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986431 1 11211 0 0 011232210
Q ss_pred -HHHHHHHHHHHHHHh----------CCCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 726 -SIALGSSRGILYLHT----------EADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 726 -~i~~~ia~gL~yLH~----------~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
.+...+.+++++|++ ...+.++|+|+++.|||++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 011123345667763 1234599999999999998888999999998754
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.75 E-value=6.7e-05 Score=79.08 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=57.8
Q ss_pred CCCCCccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-C--CceeeEEEEEeeCCeEEEEEEc
Q 003140 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H--RNLVSLVGYCDEEGEQMLVYEF 701 (845)
Q Consensus 625 ~f~~~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H--~nIv~l~g~~~~~~~~~LV~E~ 701 (845)
.....+.+|.|..+.||+....||+.|.||+...........|..|.+.|+.+. . --+.+.+++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 344567899999999999999999999999876544444456888999998884 2 2345555542 23689999
Q ss_pred CCCCC
Q 003140 702 MSNGT 706 (845)
Q Consensus 702 ~~~gs 706 (845)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.74 E-value=0.00011 Score=78.25 Aligned_cols=137 Identities=16% Similarity=0.147 Sum_probs=92.7
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC---CCceeeEEEEEeeCCeEEEEEEcCCCC
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~---H~nIv~l~g~~~~~~~~~LV~E~~~~g 705 (845)
.+.|+.|....+|+... ++..+++|+.... ....|..|.+.|+.+. ...+++.++++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999886 4677888986542 3557889999988883 367888999988888999999999987
Q ss_pred CHH--------H---HHhccCC-C-------------------CCCHHHHH-----HHHH--------------HHH-HH
Q 003140 706 TLR--------D---QLSAKSK-E-------------------PLGFAMRL-----SIAL--------------GSS-RG 734 (845)
Q Consensus 706 sL~--------~---~l~~~~~-~-------------------~l~~~~~~-----~i~~--------------~ia-~g 734 (845)
.+. . -+|.... . .-+|.... .-.. .+. +.
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 541 1 1232211 0 12454321 1111 111 11
Q ss_pred HHHHHh-CCCCCeEecCCCCCCEEEcCCCcEEEEecC
Q 003140 735 ILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFG 770 (845)
Q Consensus 735 L~yLH~-~~~~~iiHrDLk~~NILl~~~~~~kl~DFG 770 (845)
...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223432 2356799999999999999887 8999984
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.51 E-value=1.4e-05 Score=76.92 Aligned_cols=34 Identities=6% Similarity=0.066 Sum_probs=18.7
Q ss_pred eEeEEEecCCCCcccCCCCccCCCCccEEEecCC
Q 003140 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWN 116 (845)
Q Consensus 83 ~v~~L~L~~~~l~~~~~~~l~~L~~L~~L~L~~N 116 (845)
.++.||++++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4566666666555433334455555666666555
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00042 Score=77.22 Aligned_cols=73 Identities=10% Similarity=0.122 Sum_probs=45.7
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCC----Ch-----hhHHHHHHHHHHHH-hcCCCceeeEEEEEeeCCeEEEE
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG----SL-----QGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLV 698 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~----~~-----~~~~~~~~Ei~~l~-~l~H~nIv~l~g~~~~~~~~~LV 698 (845)
.+.+|.|....||++.. +++.++||...+. .. .....+..|+..+. ...+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 46789999999999965 5678999943221 11 12223444443322 22334566777765 4667899
Q ss_pred EEcC-CC
Q 003140 699 YEFM-SN 704 (845)
Q Consensus 699 ~E~~-~~ 704 (845)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.34 E-value=3.6e-05 Score=74.02 Aligned_cols=82 Identities=18% Similarity=0.145 Sum_probs=33.8
Q ss_pred ccceeecccccccCCCCccccCccCCCEEEccCCC-CCCCCccccCCC----CCcceeeccccc-cccCCCcccCCCCCC
Q 003140 155 KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQIPPELSRL----PSLVHMLLDNNN-LTGYLPPELSELPKL 228 (845)
Q Consensus 155 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~L 228 (845)
+|+.|||+++.|+..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443322334444555555555543 331111122222 245555555542 442222234444555
Q ss_pred cEEEccCC
Q 003140 229 LILQLDNN 236 (845)
Q Consensus 229 ~~L~Ls~N 236 (845)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.13 E-value=0.0021 Score=69.03 Aligned_cols=140 Identities=15% Similarity=0.119 Sum_probs=74.0
Q ss_pred ccccccCceE-EEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-C-CceeeEEEEEeeCCeEEEEEEcCCCCC
Q 003140 630 TQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-RNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (845)
Q Consensus 630 ~~LG~G~fG~-Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H-~nIv~l~g~~~~~~~~~LV~E~~~~gs 706 (845)
+.|+.|+... +|+....+|..+++|....... .++..|+++++.+. + -.+.+++.+..+.+ ++|||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566565544 6677654467777776544221 23445666666663 2 23556777654443 68999998767
Q ss_pred HHHHHhcc---------------------CC---CCCCHHHHH-------H-------------HHHHHHHHHHHHH---
Q 003140 707 LRDQLSAK---------------------SK---EPLGFAMRL-------S-------------IALGSSRGILYLH--- 739 (845)
Q Consensus 707 L~~~l~~~---------------------~~---~~l~~~~~~-------~-------------i~~~ia~gL~yLH--- 739 (845)
+.+++... .. ..++..... . ....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65544211 00 011111100 0 0011112223331
Q ss_pred hCCCCCeEecCCCCCCEEEcCC----CcEEEEecCCccc
Q 003140 740 TEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 774 (845)
Q Consensus 740 ~~~~~~iiHrDLk~~NILl~~~----~~~kl~DFGla~~ 774 (845)
....+.++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1223458999999999999875 6899999998865
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.10 E-value=0.0021 Score=68.45 Aligned_cols=158 Identities=13% Similarity=0.116 Sum_probs=86.7
Q ss_pred cchHHHHHHhcCCCC-----CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc--eeeEE
Q 003140 614 FTYGEMALATNNFNS-----STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLV 686 (845)
Q Consensus 614 ~~~~~~~~~~~~f~~-----~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--Iv~l~ 686 (845)
++.+++......|.. .+.|+.|....+|+....+| .+++|...... ...++..|+++++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 334444444445544 34567788899999987666 57788876521 1234556777777663212 23333
Q ss_pred EE------EeeCCeEEEEEEcCCCCCHH-----H---------HHhccC----CC---C---CCHHHHHH----------
Q 003140 687 GY------CDEEGEQMLVYEFMSNGTLR-----D---------QLSAKS----KE---P---LGFAMRLS---------- 726 (845)
Q Consensus 687 g~------~~~~~~~~LV~E~~~~gsL~-----~---------~l~~~~----~~---~---l~~~~~~~---------- 726 (845)
.. ....+..+++|+|++|..+. . -+|... .. . ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 21 12346678999999875431 1 112110 00 0 11322111
Q ss_pred --HHHHHHHHHHHHHhC----CCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 727 --IALGSSRGILYLHTE----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 727 --i~~~ia~gL~yLH~~----~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
+...+.+.++++++. ....++|+|+++.|||++.+..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011234455666532 234589999999999999876678999998753
No 434
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.91 E-value=0.0018 Score=70.65 Aligned_cols=141 Identities=18% Similarity=0.179 Sum_probs=82.7
Q ss_pred CccccccCceEEEEEEeC--------CCcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEE
Q 003140 629 STQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~--------~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.+.+..|-...+|+.... +++.+.+|+.... ........+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 345777888889998864 2478999986432 233456678999998884 3334577777654 2999
Q ss_pred EcCCCCCHH--------------HH---HhccC---CCCCC--HHHHHHHHHHHH-------------------HHHHHH
Q 003140 700 EFMSNGTLR--------------DQ---LSAKS---KEPLG--FAMRLSIALGSS-------------------RGILYL 738 (845)
Q Consensus 700 E~~~~gsL~--------------~~---l~~~~---~~~l~--~~~~~~i~~~ia-------------------~gL~yL 738 (845)
||++|..|. +. +|... ..... |.+..++..++. +.++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 999875432 11 12211 11222 334443433321 123333
Q ss_pred ----HhC-CCCCeEecCCCCCCEEEcCC----CcEEEEecCCccc
Q 003140 739 ----HTE-ADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 774 (845)
Q Consensus 739 ----H~~-~~~~iiHrDLk~~NILl~~~----~~~kl~DFGla~~ 774 (845)
... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 222 23357899999999999876 7899999998853
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.89 E-value=0.0015 Score=72.94 Aligned_cols=70 Identities=14% Similarity=0.130 Sum_probs=49.2
Q ss_pred CccccccCceEEEEEEeCC--------CcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEE
Q 003140 629 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.+.|+.|-...||+....+ +..+.+|+..... ....+.+|..+++.+. +.-..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568888889999998753 5789999885421 1245668999888884 3333577776543 2899
Q ss_pred EcCCC
Q 003140 700 EFMSN 704 (845)
Q Consensus 700 E~~~~ 704 (845)
||+++
T Consensus 152 e~l~G 156 (429)
T 1nw1_A 152 EYIPS 156 (429)
T ss_dssp CCCCE
T ss_pred EEeCC
Confidence 99986
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.87 E-value=0.0054 Score=65.48 Aligned_cols=141 Identities=17% Similarity=0.173 Sum_probs=81.8
Q ss_pred ccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCC--ceeeEEEE-----EeeCCeEEEEEEcC
Q 003140 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR--NLVSLVGY-----CDEEGEQMLVYEFM 702 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~--nIv~l~g~-----~~~~~~~~LV~E~~ 702 (845)
..++ |....||+....+|+.+++|...... ....++..|.++++.+... .+++++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 78889999887778789999986432 2345667788888777421 23444432 22355678999999
Q ss_pred CCCCHH-----H------H---Hhcc----C---CCCCCHHHH----HHH---------------HHHHHHHHHHHHhC-
Q 003140 703 SNGTLR-----D------Q---LSAK----S---KEPLGFAMR----LSI---------------ALGSSRGILYLHTE- 741 (845)
Q Consensus 703 ~~gsL~-----~------~---l~~~----~---~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~- 741 (845)
+|..+. . . +|.. . ....++... ..+ ...+.+.++.+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 874321 1 1 1210 0 011222211 000 00111223333221
Q ss_pred ---CCCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 742 ---ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 742 ---~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234478999999999999 4 899999988754
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=9.5e-05 Score=72.42 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=34.9
Q ss_pred CccCCCCccEEEecCC-CCCC----CCcccccccccchhhhccCCCCCCC----CCCccCCCCccceeeccccccc
Q 003140 101 EIGRLSYLTILDFMWN-KISG----SIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYIS 167 (845)
Q Consensus 101 ~l~~L~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 167 (845)
.+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|... +-..+..-+.|++|+|++|.|+
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3445567777777774 6642 1233444455666666666666522 1112223344555555555554
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.78 E-value=0.0021 Score=67.87 Aligned_cols=137 Identities=12% Similarity=0.075 Sum_probs=74.6
Q ss_pred CccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCce-eeEEEEEeeCCeEEEEEEcC-CCCC
Q 003140 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFM-SNGT 706 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~E~~-~~gs 706 (845)
.+.|+.|....+|+. ..+++|+....... ..+..+|.++++.+....+ .++++++ .+.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 677999999999998 55788887643211 1123457777777642222 4666553 33346899999 5543
Q ss_pred HHH---------------H---HhccCC---CCCCHHHHH-HHHH--------------HHHHHH----HHHHh-CCCCC
Q 003140 707 LRD---------------Q---LSAKSK---EPLGFAMRL-SIAL--------------GSSRGI----LYLHT-EADPP 745 (845)
Q Consensus 707 L~~---------------~---l~~~~~---~~l~~~~~~-~i~~--------------~ia~gL----~yLH~-~~~~~ 745 (845)
+.. . +|.... ...+...++ .+.. .+.+.+ +.+.. ...+.
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 321 0 111111 001111111 1100 011111 12211 22344
Q ss_pred eEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 746 VFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 746 iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
++|+|+.+.||+ ..++.+.++||..+..
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 789999999999 6667789999998764
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.70 E-value=0.00052 Score=67.16 Aligned_cols=35 Identities=26% Similarity=0.219 Sum_probs=15.1
Q ss_pred CCCcceeeccccccccC----CCcccCCCCCCcEEEccC
Q 003140 201 LPSLVHMLLDNNNLTGY----LPPELSELPKLLILQLDN 235 (845)
Q Consensus 201 l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~ 235 (845)
-+.|++|+|+.|+|... +.+.+..-+.|++|+|++
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCC
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCC
Confidence 34445555555544421 112333334455555543
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.44 E-value=0.0085 Score=67.11 Aligned_cols=73 Identities=12% Similarity=-0.024 Sum_probs=47.3
Q ss_pred CccccccCceEEEEEEeCC-CcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCce-eeEEEEEeeCCeEEEEEEcCCCCC
Q 003140 629 STQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFMSNGT 706 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~-g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~E~~~~gs 706 (845)
.+.|+.|-...+|+....+ +..+++|+....... .-+-.+|..+++.+...++ .++++++. + .+||||+++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4568889899999998765 578889987542211 1112578888888864444 57777763 2 25999998743
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.42 E-value=0.0042 Score=56.60 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=40.9
Q ss_pred EEEcccccCC-cCCCCCCCccccCEEEccCCcCCCCcccccCCCCCCCeEecccccCc
Q 003140 278 YLDLSSNQLN-GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (845)
Q Consensus 278 ~L~Ls~N~l~-~~ip~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (845)
.++.+++.|+ ..+|.. ...+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666664 244433 2336788888888888777778888999999999999886
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.21 E-value=0.018 Score=61.91 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=27.9
Q ss_pred CCCeEecCCCCCCEEEcCCCcEEEEecCCccc
Q 003140 743 DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (845)
Q Consensus 743 ~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~ 774 (845)
...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34589999999999999888899999988754
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.13 E-value=0.007 Score=65.90 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=43.2
Q ss_pred ccccccCceEEEEEEeCC---------CcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc-eeeEEEEEeeCCeEEEEE
Q 003140 630 TQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~~---------g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~n-Iv~l~g~~~~~~~~~LV~ 699 (845)
+.++.|..-.+|+....+ +..+++|+....... ..+...|.++++.+...+ ..++++.. .+ ++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--cEEE
Confidence 457788888999988654 268888887653221 112356788887774223 44666554 22 6899
Q ss_pred EcCCCCC
Q 003140 700 EFMSNGT 706 (845)
Q Consensus 700 E~~~~gs 706 (845)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998743
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.61 E-value=0.016 Score=63.52 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=81.5
Q ss_pred ccccccCceEEEEEEeCC--------CcEEEEEEccCCChh------------hH------HHHHHHHHHHHhcC-CCce
Q 003140 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQ------------GE------KEFLTEIQFLSRLH-HRNL 682 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~------------~~------~~~~~Ei~~l~~l~-H~nI 682 (845)
+.|..|-...+|+...++ +..|.+++.-..... .+ +....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667888899988754 367888886543211 11 12335888888884 4445
Q ss_pred eeEEEEEeeCCeEEEEEEcCCCCCHH--------------HHH---hccC---CCCCC--HHHHHHHHHHHH--------
Q 003140 683 VSLVGYCDEEGEQMLVYEFMSNGTLR--------------DQL---SAKS---KEPLG--FAMRLSIALGSS-------- 732 (845)
Q Consensus 683 v~l~g~~~~~~~~~LV~E~~~~gsL~--------------~~l---~~~~---~~~l~--~~~~~~i~~~ia-------- 732 (845)
.++++++... +|+||+++-+|. ..+ |... ..... |....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6788776532 899999864331 111 1111 11122 223333332221
Q ss_pred --------------HHH----HHHHhC-CCCCeEecCCCCCCEEEcCC------CcEEEEecCCcc
Q 003140 733 --------------RGI----LYLHTE-ADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 773 (845)
Q Consensus 733 --------------~gL----~yLH~~-~~~~iiHrDLk~~NILl~~~------~~~kl~DFGla~ 773 (845)
+-+ ++|... ....++|+|+.+.||+++++ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 233332 23347799999999999887 789999999875
No 445
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=94.05 E-value=0.026 Score=38.68 Aligned_cols=30 Identities=20% Similarity=0.491 Sum_probs=21.8
Q ss_pred CCCCCccceeehhHHHHHHHHHHHHHHHHH
Q 003140 554 NSGISKAALAGIILGAIAGAVTISAIVSLL 583 (845)
Q Consensus 554 ~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~ 583 (845)
+++.+..+++||++|+++++.++.+++.++
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 445677889999999888877766655444
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.81 E-value=0.18 Score=55.52 Aligned_cols=73 Identities=10% Similarity=0.007 Sum_probs=47.1
Q ss_pred CccccccCceEEEEEEeCC--------CcEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCeEEEEE
Q 003140 629 STQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (845)
Q Consensus 629 ~~~LG~G~fG~Vy~~~~~~--------g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~ 699 (845)
.+.+..|-...+|+....+ +..+++|+...... ..-+-.+|.++++.+. +.-..++++.+. + ++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEEE
Confidence 3457778888999988753 57889998654321 1112356778877774 333456665432 2 6899
Q ss_pred EcCCCCC
Q 003140 700 EFMSNGT 706 (845)
Q Consensus 700 E~~~~gs 706 (845)
||++|..
T Consensus 150 efI~G~~ 156 (424)
T 3mes_A 150 EFIDGEP 156 (424)
T ss_dssp ECCCSEE
T ss_pred EEeCCcc
Confidence 9999855
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.91 E-value=0.69 Score=50.59 Aligned_cols=29 Identities=34% Similarity=0.458 Sum_probs=24.6
Q ss_pred eEecCCCCCCEEE------cCCCcEEEEecCCccc
Q 003140 746 VFHRDIKASNILL------DHKFTAKVADFGLSRL 774 (845)
Q Consensus 746 iiHrDLk~~NILl------~~~~~~kl~DFGla~~ 774 (845)
++|+|+.+.|||+ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567899999998854
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.80 E-value=0.54 Score=33.22 Aligned_cols=8 Identities=25% Similarity=0.484 Sum_probs=3.1
Q ss_pred ceeehhHH
Q 003140 561 ALAGIILG 568 (845)
Q Consensus 561 ~~~~ii~~ 568 (845)
+|++-++|
T Consensus 12 ~IA~gVVg 19 (44)
T 2ks1_B 12 SIATGMVG 19 (44)
T ss_dssp SSTHHHHH
T ss_pred eEEeehhH
Confidence 34333333
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.25 E-value=0.48 Score=33.39 Aligned_cols=8 Identities=50% Similarity=0.825 Sum_probs=3.3
Q ss_pred hhHHHHHH
Q 003140 565 IILGAIAG 572 (845)
Q Consensus 565 ii~~~~~~ 572 (845)
|+.|++.+
T Consensus 12 IA~gVVgG 19 (44)
T 2l2t_A 12 IAAGVIGG 19 (44)
T ss_dssp HHHHHHHH
T ss_pred EEEeehHH
Confidence 44444443
No 450
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=86.58 E-value=2.4 Score=41.58 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=64.7
Q ss_pred CCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcccCCCCCCCCc
Q 003140 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (845)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~~~~~~~~~~~ 783 (845)
.-||.+.|+.. +.++++.++|.++.|.++.|.-+-...++ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 32 ~vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 32 ALSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred cccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc----------
Confidence 34789988764 46899999999999999887665211111 1233446889999999998764 2110
Q ss_pred cccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHh
Q 003140 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 827 (845)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~ellt 827 (845)
.....+.+||... ...+.+.=|||+|+++|.-+-
T Consensus 98 ---------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 ---------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ------------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred ---------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0113467888653 355788999999999999874
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=82.25 E-value=1.3 Score=31.10 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=11.6
Q ss_pred ceeehhHHHHHHHHHHHHHHHHHHHhh
Q 003140 561 ALAGIILGAIAGAVTISAIVSLLIVRA 587 (845)
Q Consensus 561 ~~~~ii~~~~~~~~~~~~~~~~~~~~~ 587 (845)
.++++++| +..++++++.+.++++|+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehh
Confidence 45666666 333333333333444333
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.54 E-value=4.2 Score=39.75 Aligned_cols=116 Identities=9% Similarity=0.075 Sum_probs=78.0
Q ss_pred CCCceeeEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEecCCCCCCEE
Q 003140 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 757 (845)
Q Consensus 678 ~H~nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iiHrDLk~~NIL 757 (845)
.||++++. .+-.+++...+.|+.-++ ..+|- .-..++...+++++.+|+....+++. =+|--|.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~---~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD---NIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG---GGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHH---HHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEE
Confidence 68888866 566667777776765432 22221 12346788999999999987766654 368889999999
Q ss_pred EcCCCcEEEEecCCcccCCCCCCCCccccceeecccCCCCccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 003140 758 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (845)
Q Consensus 758 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwS~Gvvl~elltG~~Pf~ 833 (845)
++.++.+++.-.|+-..+ +|. ..+...=.-.+=+++..+++++..|.
T Consensus 112 f~~~~~p~i~~RGik~~l------------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV------------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTTB------------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccCC------------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999877763222 111 12222223347788888888888875
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=75.98 E-value=8.8 Score=37.63 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=59.2
Q ss_pred CCCceeeEEEEEeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHH-HHHhCCCCCeEecCCCCCCE
Q 003140 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL-YLHTEADPPVFHRDIKASNI 756 (845)
Q Consensus 678 ~H~nIv~l~g~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~iiHrDLk~~NI 756 (845)
.||.+ -...-.+++...+.|+.-+++.=...++ .++...+++++.+++.... +++. -+|--++|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57877 4445577788888887653432222332 3678889999988777555 4433 56888999999
Q ss_pred EEcCCCcEEEEecCCc
Q 003140 757 LLDHKFTAKVADFGLS 772 (845)
Q Consensus 757 Ll~~~~~~kl~DFGla 772 (845)
++|.++.++|.-.|+-
T Consensus 116 ~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 116 MFNRALEPFFLHVGVK 131 (219)
T ss_dssp EECTTCCEEESCCEET
T ss_pred EEeCCCcEEEEEcCCc
Confidence 9999999999887763
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.95 E-value=0.37 Score=53.83 Aligned_cols=60 Identities=5% Similarity=0.041 Sum_probs=17.6
Q ss_pred CCccccccCceEEEEEEeCC-CcEEEE------EEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEe
Q 003140 628 SSTQIGQGGYGKVYKGILPD-GTVVAV------KRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (845)
Q Consensus 628 ~~~~LG~G~fG~Vy~~~~~~-g~~vAV------K~~~~~~~--~~~~~~~~Ei~~l~~l~H~nIv~l~g~~~ 690 (845)
..+.|| ||.||+|.+.. ..+||| |..+.... +..+.|.+|..+++..+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 355676 99999999854 467888 76665332 23357889999999999999999887653
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=69.99 E-value=5.7 Score=27.99 Aligned_cols=20 Identities=10% Similarity=0.310 Sum_probs=14.2
Q ss_pred cceeehhHHHHHHHHHHHHH
Q 003140 560 AALAGIILGAIAGAVTISAI 579 (845)
Q Consensus 560 ~~~~~ii~~~~~~~~~~~~~ 579 (845)
+...+|++|++.+++.++++
T Consensus 8 s~~~~IA~gVVgGv~~~~ii 27 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVV 27 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHH
Confidence 56888888888877664443
No 456
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=66.08 E-value=7.1 Score=27.48 Aligned_cols=32 Identities=13% Similarity=0.243 Sum_probs=19.1
Q ss_pred CccceeehhHHHHHHHHHHHHHHHHHHHhhhc
Q 003140 558 SKAALAGIILGAIAGAVTISAIVSLLIVRAHM 589 (845)
Q Consensus 558 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ 589 (845)
...++++-++|-+++++++++.+.++++|++.
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 34567777777666666666555555544433
No 457
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=60.58 E-value=10 Score=25.49 Aligned_cols=30 Identities=30% Similarity=0.430 Sum_probs=22.0
Q ss_pred CccceeehhHHHHHHHHHHHHHHHHHHHhh
Q 003140 558 SKAALAGIILGAIAGAVTISAIVSLLIVRA 587 (845)
Q Consensus 558 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 587 (845)
+...++.||.+++++++....++.+.+.|.
T Consensus 8 s~p~i~lII~~vmaGiIG~IllI~y~I~rl 37 (40)
T 1afo_A 8 SEPEITLIIFGVMAGVIGTILLISYGIRRL 37 (40)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778889999988888777766666543
No 458
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=59.46 E-value=4 Score=28.23 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=9.5
Q ss_pred eeehhHHHHHHHHHHH
Q 003140 562 LAGIILGAIAGAVTIS 577 (845)
Q Consensus 562 ~~~ii~~~~~~~~~~~ 577 (845)
+.+|+++++++++.++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 4456666666666555
No 459
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=54.63 E-value=8.4 Score=25.31 Aligned_cols=23 Identities=35% Similarity=0.548 Sum_probs=15.5
Q ss_pred CCccceeehhHHHHHHHHHHHHH
Q 003140 557 ISKAALAGIILGAIAGAVTISAI 579 (845)
Q Consensus 557 ~~~~~~~~ii~~~~~~~~~~~~~ 579 (845)
.+..+++||++|.+++.+.+.+.
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~ 26 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALA 26 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHH
Confidence 34567888888887776655443
No 460
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=52.19 E-value=90 Score=35.46 Aligned_cols=46 Identities=20% Similarity=0.124 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 721 FAMRLSIALGSS--RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 721 ~~~~~~i~~~ia--~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
+..+..++...| ..+.|+=.-+ |=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGig-------DRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGVG-------DRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCC-------CCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeecc-------CCCCcceeEcCCCCEeeeehHHhh
Confidence 556666666554 4567775444 888999999999999999999873
No 461
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=42.48 E-value=37 Score=23.02 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=19.3
Q ss_pred CccceeehhHHHHHHHHHHHHHHHHHHHhh
Q 003140 558 SKAALAGIILGAIAGAVTISAIVSLLIVRA 587 (845)
Q Consensus 558 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~ 587 (845)
+...-.|.|+|+++++++.++++..+.+..
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 344557778888888877666555555443
No 462
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=39.66 E-value=2.3e+02 Score=32.72 Aligned_cols=45 Identities=22% Similarity=0.133 Sum_probs=33.8
Q ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCeEecCCCCCCEEEcCCCcEEEEecCCcc
Q 003140 722 AMRLSIALGSS--RGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (845)
Q Consensus 722 ~~~~~i~~~ia--~gL~yLH~~~~~~iiHrDLk~~NILl~~~~~~kl~DFGla~ 773 (845)
..+..++...| ..+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 44555665554 456676444 4889999999999999999999863
No 463
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=35.09 E-value=39 Score=25.77 Aligned_cols=21 Identities=29% Similarity=0.518 Sum_probs=14.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 003140 565 IILGAIAGAVTISAIVSLLIV 585 (845)
Q Consensus 565 ii~~~~~~~~~~~~~~~~~~~ 585 (845)
|++|.+++++.+..+.+++..
T Consensus 12 ivlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHhh
Confidence 778887777776666555444
No 464
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.13 E-value=28 Score=27.97 Aligned_cols=21 Identities=14% Similarity=0.260 Sum_probs=11.7
Q ss_pred eeehhHHHHHHHHHHHHHHHH
Q 003140 562 LAGIILGAIAGAVTISAIVSL 582 (845)
Q Consensus 562 ~~~ii~~~~~~~~~~~~~~~~ 582 (845)
+++|++|++++++++++++++
T Consensus 10 ~~~Iv~gvi~gilliGlllll 30 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALL 30 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHH
Confidence 456666666665555544433
No 465
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.25 E-value=97 Score=25.88 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=16.1
Q ss_pred CccCCCCccceeecccccccCCCCccccCccCCCEEEcc
Q 003140 148 EELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (845)
Q Consensus 148 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (845)
..|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444432 222333344444444444443
No 466
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.35 E-value=1.3e+02 Score=25.01 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=30.1
Q ss_pred cccCCCCccccCccCCCEEEccCCCCCCCCccccCCCCCcceeecccc
Q 003140 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (845)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 212 (845)
.++.+-...|.++++|+.+.|-.+ ++..-..+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445455567777888887777654 34344556777777777776553
No 467
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=27.26 E-value=60 Score=22.77 Aligned_cols=31 Identities=10% Similarity=0.176 Sum_probs=20.0
Q ss_pred ceeehhHHHHHHHHHHHHHHHHHHHhhhccc
Q 003140 561 ALAGIILGAIAGAVTISAIVSLLIVRAHMKN 591 (845)
Q Consensus 561 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (845)
.....|++.++++++++++...+..+.++++
T Consensus 9 ~~~~~Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 9 SPLTSIISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhheehhh
Confidence 3466678888886655555566667766653
No 468
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.19 E-value=83 Score=32.77 Aligned_cols=138 Identities=18% Similarity=0.166 Sum_probs=68.4
Q ss_pred ccccccCceEEEEEEeCCCcEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEE---------------------
Q 003140 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY--------------------- 688 (845)
Q Consensus 630 ~~LG~G~fG~Vy~~~~~~g~~vAVK~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~l~g~--------------------- 688 (845)
+..-.|.. .||.+.. ++..|.||-.. ....+.|..++...=.+.-|+.--+.-.
T Consensus 75 ~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 44455554 4555444 57889999431 1222334444443333444443222110
Q ss_pred -EeeCCeEEEEEEcCCCCCHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-CCeEe-cCCCCCCEEEcCCC-cE
Q 003140 689 -CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEAD-PPVFH-RDIKASNILLDHKF-TA 764 (845)
Q Consensus 689 -~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~iiH-rDLk~~NILl~~~~-~~ 764 (845)
....+..+++|||.+|..|.+.-+......+....... .+-+-++.++..+.+ .|.+. .--.+.|||+++++ .+
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~--LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~ 227 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQ--LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATV 227 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHH--HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCE
T ss_pred HHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHh--hchhheehhhhcCCccCcccccCCCChhheEEeCCCCeE
Confidence 00122467999999875554321110001122222221 122334666665542 22221 23578899998755 48
Q ss_pred EEEecCCccc
Q 003140 765 KVADFGLSRL 774 (845)
Q Consensus 765 kl~DFGla~~ 774 (845)
.++|-+++..
T Consensus 228 ~~IDhn~af~ 237 (342)
T 1cja_A 228 VPIDSKIIPL 237 (342)
T ss_dssp EECSCCCCCC
T ss_pred EEEcCCcccc
Confidence 9999999865
Done!