BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003142
(844 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73625|MUTS2_SYNY3 MutS2 protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mutSB PE=3 SV=1
Length = 822
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 247/824 (29%), Positives = 394/824 (47%), Gaps = 144/824 (17%)
Query: 42 SDDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN 101
SD + E+L +LEW +LC +S+F +T LG A + +++S LL +T
Sbjct: 2 SDSTNLTIAEETLALLEWPRLCQHLSTFTQTPLG--AIAARYLLPPSQWEESRELLAQTQ 59
Query: 102 AAIEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRA 161
A ++ + G+ + + + V R + E LA+ L LR
Sbjct: 60 AVESIENSPESNWHFKGI--ADITEPLARVERGGLVTGLELLAIAGTLAGVR----RLRR 113
Query: 162 AIKEDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQML 221
I+E DL I L ++ ++ L ++I + EDG + + ASP L + R +++ +
Sbjct: 114 VIEERDDLEI----LQTLVAEVRTLPELEQAIHHCLGEDGKVAERASPKLGEIRQKLKAV 169
Query: 222 ERKLYQLMDMLIRNENNESLFLEVSSIHGR-----LCIRTGADQLSFKGLLL-SSSSGIG 275
++ Q + +I+ ++N L+ + I R L I+ G + G++ SS+SG
Sbjct: 170 REQIQQKLQKIIQRQSN---ALQEAVITQRGDRFVLPIKAGYKE-QMPGIVHDSSASGNT 225
Query: 276 SVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNAR 335
+EP + V L ++L+QAR EE +L L++++ L ++E +L +LD+ AR
Sbjct: 226 LYVEPQAIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLAIATRLDLATAR 285
Query: 336 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 395
YS G P P D K P+T L + HPLL Q +++
Sbjct: 286 VRYSFWLGAHPPQWLTPGDEK------PIT-------------LRQLRHPLLHWQAEKE- 325
Query: 396 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 455
GG A VPI + I +
Sbjct: 326 --------------------GGPAV------------------------VPITLTIDSQI 341
Query: 456 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 515
RV+ ITGPNTGGKT+ LKT+GL +MAK GL+I + E ++PWF + ADIGDEQSL Q+
Sbjct: 342 RVIAITGPNTGGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQN 401
Query: 516 LSTFSGHLKQIGNIISQSTS------------------QSLVLLDEIGAGTNPLEGTALG 557
LSTFSGH+ +I I+ S SLVLLDE+GAGT+P EG+AL
Sbjct: 402 LSTFSGHICRIIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALA 461
Query: 558 MSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRS 617
++LL A+ LT+ATTH+GELK LKY + FENA +EFD+ L PTY++LWG+PGRS
Sbjct: 462 IALLRHLADQ-PCLTVATTHYGELKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRS 520
Query: 618 SAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRN 677
+A+ IA+RLGLP +V+ A+ G S +IN+VI +E + + + A+ L +
Sbjct: 521 NALAIAQRLGLPLAIVEQAKDKLGGFSEDINQVIAGLESQRREQEQKAANAQKLLQETEI 580
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 737
++ ++ + AS + R+ + +S + QQ +A + + V ++
Sbjct: 581 FYQ-------QVSQKAASLQARERE--------LKSYQDQEVQQAIAAAKEEIAKVIRQL 625
Query: 738 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 797
Q+ +PSA ++ T++ Q KV +P+ +
Sbjct: 626 QRGKPSAQKAQQATEI-------LGQIQAEQKAKV----------------APKPIGYQ- 661
Query: 798 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
P VG+ + + SFG+ V +V + + + V +G MK + DI
Sbjct: 662 PTVGERIRIPSFGQTAEVTQVNATAQTVNVTLGLMKMTVPMADI 705
>sp|C0Z9F1|MUTS2_BREBN MutS2 protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=mutS2 PE=3 SV=1
Length = 785
Score = 270 bits (689), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 243/804 (30%), Positives = 387/804 (48%), Gaps = 144/804 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + A + G+E ++L LRL DE A + + +
Sbjct: 6 LKTLEYDKIVALLIDKASCTYGKEKA-SELIPF-------LRL-DEVINAQQGTEQAATV 56
Query: 114 LDLTGVDLSLVKSAIREVRRASPL---RPNEALAVVALLQFSETLQLSLRAA-----IKE 165
L L G S+ IR++R P+ R N LA + LL + T+ R + +
Sbjct: 57 LRLKG---SVPLGGIRDIR--GPVQRARLNAMLAPMELLDIASTVMAGRRLKTFLLDMCD 111
Query: 166 DADLYIRFMPLTQMIMQLFVN-RSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERK 224
D +L PL Q + R L I + VDE+G I DSAS L+Q R +++ LE +
Sbjct: 112 DHEL-----PLLQQQAERIEGLRELETEIRRCVDENGDILDSASLELRQVRQEIRQLESR 166
Query: 225 LYQLMDMLIRNENNESLFLE-VSSIHG-RLCIRTGADQLSFKGLLL--SSSSGIGSVIEP 280
+ + +D + R+ + + +E + +I G R I + S G ++ S+SG IEP
Sbjct: 167 IREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPVKQEYRSVFGGIVHDQSASGATLFIEP 226
Query: 281 LSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 340
V +N++L++ R + E +L LTE++ ++ + + + +LD + A+A +
Sbjct: 227 EVIVEMNNKLRELRLREEREVERILYVLTEQVSFAVEALVENTEALTELDFMFAKAQLAW 286
Query: 341 SFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWK 400
S P I ++R + + + KA HPL+
Sbjct: 287 SMKAICPRI---------------------NDRGY-VNMRKARHPLI------------- 311
Query: 401 DLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVI 460
P E+ V P+D+ + + + +V+
Sbjct: 312 ------------------------------PREVVV---------PVDVELGGEYQAIVV 332
Query: 461 TGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFS 520
TGPNTGGKT+ LKT+GL +M +GLHI + E +++ F S+FADIGDEQS+ QSLSTFS
Sbjct: 333 TGPNTGGKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFS 392
Query: 521 GHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGE 580
H+ I I+++ +SLVL DE+GAGT+P EG AL MS+++ +SG+ L +ATTH+ E
Sbjct: 393 SHMTNIIQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARL-VATTHYSE 451
Query: 581 LKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLY 640
LK Y NA +EFD L+PTY++L GVPGRS+A IA RLGLP ++ AR
Sbjct: 452 LKAYAYDRPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVAR--- 508
Query: 641 GAASAEINEV---IIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
G+ S E N+V I +ER + A+ + L L R + A ++
Sbjct: 509 GSISEEDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEEERAQF----AEEK 564
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
+++++ D A IA L + A+ + R L A+ + + + K
Sbjct: 565 NKRMERAEDEARIAVQLAKEEAETII------RELREMMAEGMEIKEHRLIDAKK----- 613
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L + + +KV+ PA A V+ T++ VGD V V+SFG+KGTV++
Sbjct: 614 -RLGNAVLELEKEKVKKPAKA-------------VRATQI-KVGDEVMVTSFGQKGTVLE 658
Query: 818 VEPSKEEIVVQVGNMKWIMKFTDI 841
+ + EE +VQ+G MK +K D+
Sbjct: 659 -KVNNEEFLVQIGIMKMKVKRDDM 681
>sp|Q49WR1|MUTS2_STAS1 MutS2 protein OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=mutS2 PE=3 SV=1
Length = 782
Score = 262 bits (670), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 233/797 (29%), Positives = 383/797 (48%), Gaps = 126/797 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
+SL VLE+DK+ + + + LG+E + + + T + + DE + KH
Sbjct: 4 KSLNVLEFDKIKALIENETISDLGKEKVVDMAPATDFNTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ + + I + L +E + L+Q + + E+
Sbjct: 62 MPSL--SG--LAKISTYIHRAKIGGVLSVSELNVIKRLIQIQNQYKTFYNNLLNEEET-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
I + L + QL V L +SI Q D + D+AS L+ R ++ +++ Q +D
Sbjct: 116 INYPILNDRMEQLPVLSDLYQSIHQKCDT-YDLYDNASYELQGIRSKISSTNQRIKQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPL 286
+++++ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 KIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSIVEM 234
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDE--IEKMLNGIIQLDVVNARATYSLSFGG 344
++++ + + E +L ALT ++ + D I + + G Q+D + A+A Y+ S G
Sbjct: 235 SNQISRLKNDEAIERERILSALTVEVAEEADACLISESIMG--QIDFLTAKARYASSIKG 292
Query: 345 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 404
T P ++ T+YLPKA+HPLL KQ
Sbjct: 293 TKPQFT----------------------KDRTVYLPKAFHPLL---DKQTV--------V 319
Query: 405 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 464
ANT I A+ ++ITGPN
Sbjct: 320 ANT-----------------------------------------IEFAQDIETVIITGPN 338
Query: 465 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 524
TGGKT+ LKT+GL ++MA+SG+ I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K
Sbjct: 339 TGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 525 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 584
I I+ +T SL+L DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK
Sbjct: 399 NIVEILQDTTKNSLILFDELGAGTDPSEGAALAMSILDHVHEIGSLV-MATTHYPELKAY 457
Query: 585 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 644
Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL V+Q A+ + G
Sbjct: 458 SYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISKKLGLNMKVIQKAKSMIGQDE 517
Query: 645 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 704
EINE+I +E + E E + L +++ H L + + H + Q +
Sbjct: 518 QEINEMIASLESNSKRVDEQRIELDYLLREAQDTHDALAKQYEQYQNH-------EKQLM 570
Query: 705 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 764
++A + A Q SA++ + K ++LR + +H L
Sbjct: 571 NEAK--------EKANQRVKSATKEADDILKELRELRDQKGADV-------KEHELIDKK 615
Query: 765 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 824
+Q D+ E K +KQ+ + K+ + N GD V V ++G+KG V+++ E
Sbjct: 616 KQLD-DQYE---------AKSLKQNVQKKKWDEINAGDEVKVLTYGQKGEVLEL-IDNNE 664
Query: 825 IVVQVGNMKWIMKFTDI 841
VVQ+G +K + D+
Sbjct: 665 AVVQMGIIKMKLPLEDL 681
>sp|Q4L5E9|MUTS2_STAHJ MutS2 protein OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=mutS2 PE=3 SV=1
Length = 783
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 235/795 (29%), Positives = 373/795 (46%), Gaps = 121/795 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE+DK+ V+S + LGRE + + +T + + DE + KH
Sbjct: 4 KTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ + I L E V L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKISPLIHRANIGGVLNVTELNLVKRLIQVQNQFKTFYNQLLEEDEQV- 116
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + QL + L + I + D + DSAS L+ R ++ +++ Q +D
Sbjct: 117 VKYPILNDKMNQLPILSDLFQEINEKCDTH-DLYDSASYELQGIRSKISSTNQRIRQNLD 175
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPL 286
+++++ N+ + ++ + R I A+ + FKG++ S+SG IEP S V +
Sbjct: 176 RIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEM 235
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+++ + R E +L LT + + D + + Q+D + A+A Y+ S GT
Sbjct: 236 NNQISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKARYARSIKGTK 295
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
P + ++ T+YLP AYHPLL KD AN
Sbjct: 296 PTFY----------------------KDRTVYLPNAYHPLL-----------NKDTVVAN 322
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
T I ++ITGPNTG
Sbjct: 323 T-----------------------------------------IEFVDDIETVIITGPNTG 341
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 342 GKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNI 401
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
I+ ++ SLVL DE+GAGT+P EG AL MS+L+ E GSL+ +ATTH+ ELK Y
Sbjct: 402 VEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLV-MATTHYPELKAYSY 460
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
+ + NA +EFD L PTYK+L GVPGRS+A +I+ +LGL ++ A+ + G E
Sbjct: 461 NREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKTMIGTDEQE 520
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 706
IN +I +E+ + E E L +R H + LEH Q +K+ D
Sbjct: 521 INSMIESLEKNSKRVDEQRIELDRLLKEARKTHDD--------LEHQYEQYKSYEKKLMD 572
Query: 707 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 766
A + A Q SA++ + K + LR + +H L +Q
Sbjct: 573 EAK-------EKANQRVKSATKEADSILKELRTLRDQKGADV-------KEHELIDKKKQ 618
Query: 767 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 826
D+ E K +KQ+ + ++ + + GD V V S+G+KG V S+EE V
Sbjct: 619 LD-DQYE---------AKSLKQNVQKQKYDEIHAGDEVKVLSYGQKGEV-LELVSEEEAV 667
Query: 827 VQVGNMKWIMKFTDI 841
VQ+G +K + D+
Sbjct: 668 VQMGIIKMKLPIEDL 682
>sp|A7Z7E7|MUTS2_BACA2 MutS2 protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutS2
PE=3 SV=1
Length = 785
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 310/636 (48%), Gaps = 94/636 (14%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQ--TYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ +++ A +SLGRE L QL + Q L ++E +A + ++ H
Sbjct: 6 LSSLEFHKVKEQITAHAASSLGRE-KLLQLKPLTDLSDIQKQLDEVEEASAVMRLRGHAP 64
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L+ ++SA+R S L P E + LL + ++ + + + ED
Sbjct: 65 FG------GLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFI-SQMTEDG---- 113
Query: 172 RFMPLTQM-IMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+PL Q +L L + I +D+ G + D ASPAL+ R Q++ LE ++ ++
Sbjct: 114 VGIPLIQAHAEELITLGDLEREINSCIDDHGEVLDHASPALRGIRTQLRTLESRVRDRLE 173
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL--SSSSGIGSVIEPLSAVPL 286
++R+ + + + V+ + R I + S G ++ +SSSG IEP + V +
Sbjct: 174 SMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDM 233
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+ LQQA+ + E +L LTE EI + + + LD + A+A Y+ + T
Sbjct: 234 NNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQDVEVLQTLDFIFAKARYAKAMKATK 293
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
P + + I L KA HPLL Q Q D+E
Sbjct: 294 PLM----------------------NGDGFIRLKKARHPLLPQD-----QVVANDIE--- 323
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
GG+ + +VITGPNTG
Sbjct: 324 --------LGGDYS------------------------------------TIVITGPNTG 339
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKT+ LKT+GL +MA++GLHI + E ++ FD+VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
NI+ + SLVL DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y
Sbjct: 400 VNILKDVSENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARV-LATTHYPELKAYGY 458
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
+ NA +EFD L PTYK+L GVPGRS+A I+ RLGLP ++ A+ A E
Sbjct: 459 NRQGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEMTAEHNE 518
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNL 682
++ +I +E+ K + E + E + LHK+L
Sbjct: 519 VDLMIASLEKSKKRADEELSETESIRKEAEKLHKDL 554
>sp|B9DPU2|MUTS2_STACT MutS2 protein OS=Staphylococcus carnosus (strain TM300) GN=mutS2
PE=3 SV=1
Length = 782
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 225/797 (28%), Positives = 380/797 (47%), Gaps = 126/797 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGR--EATLTQLWSINQTYQDSLRLLDETNAAIEM-QK 108
++L VL++DK+ V + A + LGR A +T Y+ + ++ET+ ++ K
Sbjct: 4 KTLDVLDFDKIKAQVENEAVSDLGRVKAAAMTPASD----YETVVFQMNETDELSQIYNK 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
H SL +G L+ VK I + S L E + L+Q + ++E+
Sbjct: 60 HRLPSL--SG--LTEVKPLIHRAKIGSILNVRELNQIKRLIQVQNQYKTFYSQLLEEEE- 114
Query: 169 LYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQL 228
I + L + + QL + L + I Q D + D AS L+ R ++ +++ Q
Sbjct: 115 -AINYPILDERMAQLPILTDLYQEIHQKCDA-YDLFDDASHELQSIRSRIHSTSQRIKQN 172
Query: 229 MDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAV 284
+D ++++++N+ + ++ + R I A+ + F G++ SSSG IEP + V
Sbjct: 173 LDRIVKSQSNQKKLSDAIITVRNDRHVIPVKAEYRQDFNGIVHDQSSSGQTLYIEPSAVV 232
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 344
+N+++ + R E +L L+ ++ + D + + Q+D + A+A Y S G
Sbjct: 233 EMNNKISRLRNDEKVEVERILSVLSGEVAAEADACLIAESVMGQIDFLTAKARYGQSIKG 292
Query: 345 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 404
T P E +YLPKA+HPL
Sbjct: 293 TKPEFT----------------------EERNVYLPKAFHPL------------------ 312
Query: 405 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 464
L+ A V I A + ++ITGPN
Sbjct: 313 ----------------------------------LDRATVVANTIEFAEDIQTVIITGPN 338
Query: 465 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 524
TGGKT+ LKT+GL ++MA+SGL I + + +K+ FD+V+ DIGDEQS+ QSLSTFS H+K
Sbjct: 339 TGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVFDNVYCDIGDEQSIEQSLSTFSSHMK 398
Query: 525 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 584
I I+ + SL+L DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH+ ELK
Sbjct: 399 NIVEILKHADHNSLILFDELGAGTDPSEGAALAMSILDHVQKLGSLV-MATTHYPELKAY 457
Query: 585 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 644
Y+ + NA +EFD L PTYK+L GVPGRS+A I+ +LGL G +++ A+ L G
Sbjct: 458 SYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAFEISSKLGLSGNIIREAKSLIGQDE 517
Query: 645 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKI 704
EIN +I +E + + E L ++ +H +L + ++ Q + K Q +
Sbjct: 518 QEINNMIASLETNAKKVEDQRIELDRLLREAKQVHGDLNK------KYEQYQNYEK-QLM 570
Query: 705 SDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNF 764
DA K+ Q++ + +A ++ K + +R + + ++ + + L +
Sbjct: 571 DDAKV-------KANQRVKAATKEADDII-KDLRHMRDEKNAEVKEHELIEKRKHLDEQY 622
Query: 765 QQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEE 824
+ T DIKQ+ + ++ + GD V V ++G+KG V+++ +E
Sbjct: 623 EGT-----------------DIKQNVKKQKWDEIQAGDEVKVLTYGQKGEVLEI-LDDDE 664
Query: 825 IVVQVGNMKWIMKFTDI 841
VVQ+G +K + D+
Sbjct: 665 AVVQMGIIKMKLPIADL 681
>sp|Q1WT38|MUTS2_LACS1 MutS2 protein OS=Lactobacillus salivarius (strain UCC118) GN=mutS2
PE=3 SV=1
Length = 786
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 221/788 (28%), Positives = 366/788 (46%), Gaps = 134/788 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ ++ +F TS+G+ L + Y DE + ++ K G+
Sbjct: 6 LKTLEYDKVKQNLYAFTTTSMGKR--LIDKLEPSSDY-------DEISNSLAQTKDGADI 56
Query: 114 LDLTG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
L + G +L +KS ++ + L E A+ +L+ + + K+ AD
Sbjct: 57 LRIKGGIPVPNLISIKSFLKRLDIGGTLNSKELAAIGRVLRATN----EVNRFFKDLADN 112
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
I+ L + +L + K ++ ++ DG + D AS LK R Q+ + E + + +
Sbjct: 113 KIKLEVLFDDVAKLESLPEISKKLLVSIENDGHVTDDASTLLKSIRQQISVTEETIRERL 172
Query: 230 DMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLSAVPL 286
+ R N++ L V +I R + + S F G++ SSSG +EP V L
Sbjct: 173 NAYTRGTNSKYLSNAVVTIRNERYVLPVKQEYRSKFGGIVHDQSSSGQTLFVEPAVIVEL 232
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+ L+Q + + + +L L++++ E+ + LD +NA+A Y+ S T
Sbjct: 233 NNRLRQQQVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKAT- 291
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
EP+ SK E +YL + +HPL
Sbjct: 292 ---------------EPILSK------ENDVYLRQVWHPL-------------------- 310
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
L++ V DI I + + +VITGPNTG
Sbjct: 311 --------------------------------LDMKKAVKNDIMIGKDYQAIVITGPNTG 338
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKTI LKT+GL +M +SGL+I + E +++ FD +FADIGDEQS+ QSLSTFS H+ I
Sbjct: 339 GKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
I+ +SLVL DE+GAGT+P EG AL +S+L+A GS + +ATTH+ ELK +
Sbjct: 399 VEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGAKGSYV-VATTHYPELKAYGF 457
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
NA MEFD L+PTY++L G+PGRS+A +I++RLGL ++V ARQL S +
Sbjct: 458 ERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLGLDKMIVMAARQLTSQDSQD 517
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 706
+NE+I ++ + E R +L + LH + LE Q R+ + + +
Sbjct: 518 LNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHD--------LETNFHQFERQKENMLE 569
Query: 707 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 766
A + A Q+ + + ++++ SA+ ++ + Q + + Q+
Sbjct: 570 QA-------KERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQGRVNALHQE 622
Query: 767 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 826
T + K + V++ KQ + PN D V V+S+G++G +++
Sbjct: 623 TNLKK--------NKVLRKAKQQQELH----PN--DDVMVNSYGQRGVLLR--------- 659
Query: 827 VQVGNMKW 834
+ GN W
Sbjct: 660 -KAGNHAW 666
>sp|A9KR74|MUTS2_CLOPH MutS2 protein OS=Clostridium phytofermentans (strain ATCC 700394 /
DSM 18823 / ISDg) GN=mutS2 PE=3 SV=1
Length = 796
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 224/816 (27%), Positives = 375/816 (45%), Gaps = 157/816 (19%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREAT-----LTQLWSINQTYQDSLRLLDETNAAIEM 106
++LR LE+ K+ +S+ A +SLGRE L +L I Q Q++ T+A +
Sbjct: 4 KALRTLEYHKIIEKLSALAGSSLGREKCHQLLPLVKLEDIVQMQQET------TDALTRL 57
Query: 107 QKHGSCSLDLTGVDLSLVKSAIREVRRA-SPLRPNEALAVVALLQFSETLQLSLRAA--- 162
G+ S S I ++R L +L LL+ S L +LRA
Sbjct: 58 YAKGTLSF-----------SGIPDIRDTLMRLEIGASLGAGELLKISSVLTATLRAKNYG 106
Query: 163 --------IKEDAD--LYIRFM---PLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASP 209
+E A L RF PL+ +N + + I+ + I D ASP
Sbjct: 107 YNQKNNEETEEAAQDTLTERFHLLEPLSP------INNEIRRCIIS----EEEIADDASP 156
Query: 210 ALKQSRGQVQMLERKLYQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGL 266
LK R Q+++ K+++ + ++ + + + + + ++ +GR C+ + + +F+G+
Sbjct: 157 GLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYKNTFQGM 216
Query: 267 LLS-SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNG 325
+ SS+G + IEP++ V LN+EL + + E +L L+ + + ++
Sbjct: 217 MHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYNLKYNQTT 276
Query: 326 IIQLDVVNARATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHP 385
+ +LD + ARA L ++MK S H + R + I + K HP
Sbjct: 277 LAELDFIFARAG-------------LSKNMKASQPH--------FNNRHY-INIKKGRHP 314
Query: 386 LLLQQHKQKTQQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPV 445
L + P ++ V
Sbjct: 315 L------------------------------------------IDPKKV----------V 322
Query: 446 PIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFAD 505
PIDI+ K +LVITGPNTGGKT+ LKTVGL +M ++GLHI + + +++ F+ V+AD
Sbjct: 323 PIDIYFGDKFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYAD 382
Query: 506 IGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFA 565
IGDEQS+ QSLSTFS H+ +I+ + SLVL DE+GAGT+P EG AL M++L ++
Sbjct: 383 IGDEQSIEQSLSTFSSHMTNTVSILEHANENSLVLFDELGAGTDPTEGAALAMAIL-SYL 441
Query: 566 ESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAER 625
+ T+ATTH+ ELK S D NAC EF L+PTY++L G+PG+S+A I+ +
Sbjct: 442 HQRKIRTMATTHYSELKIFALSTDGVSNACCEFSVETLQPTYRLLIGIPGKSNAFAISSK 501
Query: 626 LGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRT 685
LGL +++ AR+ G +VI +E + + EA + K +
Sbjct: 502 LGLSNYIIEKAREFIGTKDESFEDVISNLEASRIAMEKDKAEAEQY-------KKEVEEL 554
Query: 686 RRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSAS 745
+RK+ E K KI DA + + + A + +AR+++ Q+ + A
Sbjct: 555 KRKLAE--------KNSKIDDA----KDRILREANE------KARTIL----QEAKDYAD 592
Query: 746 QSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVH 805
+++ + E SS+V K++ + + VGD VH
Sbjct: 593 ETIRKYNKWGAGGANNKEMENERAALREKLGDTDSSLVSKAKKNRKQHKPSDFKVGDSVH 652
Query: 806 VSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
V S KG+V + +K ++ VQ+G ++ ++ +D+
Sbjct: 653 VISLNLKGSVSTLPNAKGDLYVQMGILRSLVNISDL 688
>sp|A4XK62|MUTS2_CALS8 MutS2 protein OS=Caldicellulosiruptor saccharolyticus (strain ATCC
43494 / DSM 8903) GN=mutS2 PE=3 SV=1
Length = 787
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 222/796 (27%), Positives = 382/796 (47%), Gaps = 123/796 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L+ LE+DK+ + + A+++ +E + S N ++ L +DE + K+G
Sbjct: 4 KTLKALEYDKIVEILKNMAKSTPAKEYFENLIPSTNLADIENELNKVDEGYRYV--LKYG 61
Query: 111 SC-SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ +L+ + SL KS + + L P+E L + +L+ S +R+ + D
Sbjct: 62 NPPTLEFENILPSLKKSKL-----GATLNPHEILQIGKVLKLS----YEMRSYLSYTQD- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
F L M +L + +I I Q I D+ASP LK+ R +++ LE ++ +
Sbjct: 112 ---FSFLESMKKRLVNLKEVISRIDQTFLTADEILDTASPRLKEIRDRIRKLESRIRDEL 168
Query: 230 DMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVP 285
+ +IR+ + E + +I G +L + A+ + KG++ S++G +EP V
Sbjct: 169 NSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVEPFVCVE 228
Query: 286 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 345
++++++ ++ + E +L ++ + DEIE +++LD+V +A ++ +
Sbjct: 229 ISNQIRILKSQEKEEIERILQEISSLIASYCDEIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 346 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 405
+PV +++S I L KA HPL+
Sbjct: 289 ----------------KPV---INTS---GIINLKKARHPLI------------------ 308
Query: 406 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 465
+KD VPIDI + + VL+ITGPNT
Sbjct: 309 ------------------QKD----------------KVVPIDIHLGKDFDVLIITGPNT 334
Query: 466 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 525
GGKT+ LKTVGL ++ +SG+ I + E +++ F +FADIGD+QS+ QSLSTFS H+K
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 526 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 585
I I + ++LVLLDEIGAGT+P EG AL ++L+ +E GS + IATTH+GELK
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKV-IATTHYGELKIFA 453
Query: 586 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 645
D FENA EFD LKPTY++L G+PGRS+A+ I+ LGL +V+ AR +
Sbjct: 454 QQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTI 513
Query: 646 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS 705
+++ +I EME+ + + E++ AR + ++ L +++ +R RK
Sbjct: 514 DLDRIINEMEQKRKEAEENLELARKLKLEAQALKAAYEEEKKRF--ETERERIRK----- 566
Query: 706 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 765
A A+ +V ++ ++ R L A+ L+ K + + ++ S Q
Sbjct: 567 KAINEAKEIVERAQYEIENLFKDLRKL----AENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 766 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 825
Q + + + +++I+ +G V+V SF G V + SK +
Sbjct: 623 QEK----QEAESKTKKTLQNIR------------LGQKVYVRSFDAVGFVESLPDSKGNL 666
Query: 826 VVQVGNMKWIMKFTDI 841
VQ+G MK + +DI
Sbjct: 667 TVQIGIMKLNVNISDI 682
>sp|Q5WEK0|MUTS2_BACSK MutS2 protein OS=Bacillus clausii (strain KSM-K16) GN=mutS2 PE=3
SV=1
Length = 787
Score = 252 bits (643), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 223/794 (28%), Positives = 377/794 (47%), Gaps = 122/794 (15%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA---IEMQKHGS 111
RVLE++K+ + +SLGR+ + S + ++ L DET A + ++ H
Sbjct: 6 RVLEYNKMKQQLLEHVASSLGRQKVNELVPST--SLEEVRHLQDETAEAANVLRLKGH-- 61
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
+ L G+ S V+ I+ L E + + + L + ++ + I+ D +I
Sbjct: 62 --VPLGGI--SDVRPHIKRAAIGGVLSATELIEIASTLYGGKRVKQFIETIIE---DGHI 114
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
L + Q+ + K+I Q +D++G + DSAS +L+ R Q++ E + +D
Sbjct: 115 EVPILAGHVEQIEPLSPIEKAIKQCIDDNGYVLDSASTSLRTVRHQIRSYESGIKSKLDQ 174
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPLN 287
L R+ N + + V+ R + + + +F G++ SSSG IEP + V LN
Sbjct: 175 LTRSSNTRKMLSDAIVTIRSDRYVLPVKQEYRGTFGGIVHDQSSSGATLFIEPAAIVTLN 234
Query: 288 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 347
++L +A+A + E +L L+ K+ + +++ ++ + QLD + A+A Y+ + P
Sbjct: 235 NQLTEAKAKEKREIERILRELSAKVAEESEQLLLNVDKLAQLDFICAKAYYAKAVKAVKP 294
Query: 348 NIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANT 407
+ ++R + + L +A HPLL
Sbjct: 295 TL---------------------NDRGY-LDLRQARHPLL-------------------- 312
Query: 408 ELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGG 467
+ PS+M + + R LVITGPNTGG
Sbjct: 313 -----------------PPDKVVPSDMAI---------------GDQVRSLVITGPNTGG 340
Query: 468 KTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIG 527
KT+ LKT+GL +MA+SGL + ++E ++ F+ +FADIGDEQS+ QSLSTFS H+K I
Sbjct: 341 KTVTLKTIGLLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIV 400
Query: 528 NIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYS 587
+I+++ SL+L DE+GAGT+P EG AL +S+L+ + G+ L +ATTH+ ELK Y+
Sbjct: 401 SILNEMNENSLILFDELGAGTDPTEGAALAISILDHVYKRGA-LAVATTHYSELKGYAYN 459
Query: 588 NDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEI 647
+ NA +EFD L+PTY++L GVPGRS+A I+ RLGL ++ A+ + ++++
Sbjct: 460 REGALNASVEFDVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQAKLQIDSDASQV 519
Query: 648 NEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 707
++I +E + A + L ++L +R +++ +A
Sbjct: 520 EKMIASLEDSQKSAQSEWSRAEAVRREAEALKRDL------------EKRMASFEEMKEA 567
Query: 708 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 767
A + A+++ +A + L+ +LR L V +H L +Q
Sbjct: 568 AL---QKAEQKAEKVVAAAQENAELI---ISELR-----DLQKQGVAVKEHQLIEARKQL 616
Query: 768 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 827
+ P S + KQ+ + KR LP GD V V SF +KGTV+K + E V
Sbjct: 617 ---EEAAPKLVSKKRKQVKKQAEKAKR--LPEPGDEVKVLSFNQKGTVVK-KIGDNEYQV 670
Query: 828 QVGNMKWIMKFTDI 841
Q+G MK + DI
Sbjct: 671 QLGIMKMAVPIDDI 684
>sp|Q5HQ30|MUTS2_STAEQ MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=mutS2 PE=3 SV=1
Length = 782
Score = 249 bits (636), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 227/795 (28%), Positives = 369/795 (46%), Gaps = 122/795 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE++K+ V+ + LGRE + N T + + DE + KH
Sbjct: 4 KTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ V + L E + L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKVSPLVHRASIGGVLNVAELNRIKRLVQVQNQFKTFYNQMLEEDEE-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + L + L K I + D + D AS L+ R ++ +++ Q +D
Sbjct: 116 VKYPILHDKMNHLPILTDLFKEINETCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPL 286
+++N+ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 RIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEM 234
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+++ + R E +L LT + + D + + + Q+D + A+A Y+ + GT
Sbjct: 235 NNQISRLRNDEAVERERILTELTGFVSAEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
P + + TIYLP A+HPLL KD AN
Sbjct: 295 PTF----------------------KEDRTIYLPNAFHPLL-----------DKDTVVAN 321
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
T +E V ++ITGPNTG
Sbjct: 322 T-------------------------------IEFIDDV----------ETVIITGPNTG 340
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 341 GKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNI 400
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y
Sbjct: 401 VEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSY 459
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+ + G E
Sbjct: 460 NREGVMNASVEFDVETLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQE 519
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 706
IN +I +E+ + + E + ++ H L + ++ + S + D
Sbjct: 520 INAMIESLEQNSKRVDQQRIELDRLVREAQQTHDALSKQYQQYQNYETS--------LMD 571
Query: 707 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 766
A + A Q SA++ + K + LR + +H L +Q
Sbjct: 572 EAK-------EKANQRVKSATKEADEILKELRNLRDHKGAEV-------KEHELIDKKKQ 617
Query: 767 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 826
D+ E VK IKQ + K+ + + GD V V S+G+KG V+++ EE V
Sbjct: 618 LD-DQYE---------VKSIKQHVQKKKYDTIHTGDEVKVLSYGQKGEVLEL-VGDEEAV 666
Query: 827 VQVGNMKWIMKFTDI 841
VQ+G +K + D+
Sbjct: 667 VQMGIIKMKLPIEDL 681
>sp|Q8CPL6|MUTS2_STAES MutS2 protein OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=mutS2 PE=3 SV=1
Length = 782
Score = 249 bits (635), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 228/798 (28%), Positives = 371/798 (46%), Gaps = 128/798 (16%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L VLE++K+ V+ + LGRE + N T + + DE + KH
Sbjct: 4 KTLDVLEFEKIKSFVADETISDLGREKVQEMAPASNFDTVEFQMNETDEISQI--YNKHR 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY 170
SL +G L+ V + L E + L+Q + ++ED +
Sbjct: 62 LPSL--SG--LAKVSPLVHRASIGGVLNVGELNRIKRLVQVQNQFKTFYNQMLEEDEE-- 115
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+++ L + L + L K I + D + D AS L+ R ++ +++ Q +D
Sbjct: 116 VKYPILHDKMNHLPILTDLFKEINEKCDAH-DLFDHASYTLQSIRSKISRTNQRIRQNLD 174
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPL 286
+++N+ N+ + V+ + R I A+ + F G++ S+SG IEP S V +
Sbjct: 175 RIVKNQGNQKKLSDAIVTVRNDRNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPNSVVEM 234
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+++ + R E +L LT + + D + + + Q+D + A+A Y+ + GT
Sbjct: 235 NNQISRLRNDEAVERERILTELTGLVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
P + E TIYLP A+HPLL KD AN
Sbjct: 295 PTF----------------------KEERTIYLPNAFHPLL-----------DKDTVVAN 321
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
T +E V ++ITGPNTG
Sbjct: 322 T-------------------------------IEFIDDV----------ETVIITGPNTG 340
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKT+ LKT+GL ++MA+SGL I + + +++ F++V+ DIGDEQS+ QSLSTFS H+K I
Sbjct: 341 GKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFENVYCDIGDEQSIEQSLSTFSSHMKNI 400
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
I+ + SL+L DE+GAGT+P EG AL MS+L+ GSL+ +ATTH+ ELK Y
Sbjct: 401 VEILQDADQNSLILFDELGAGTDPSEGAALAMSILDYVRRLGSLV-MATTHYPELKAYSY 459
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+ + G E
Sbjct: 460 NREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEQE 519
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 706
IN +I +E + + E + ++ H L S+++++ Q
Sbjct: 520 INAMIESLEHNSKRVDQQRIELDRLVREAQETHDAL------------SKQYQQYQNYE- 566
Query: 707 AAAIARSLVHKS---AQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSN 763
+SL+ ++ A Q SA++ + K + LR + +H L
Sbjct: 567 -----KSLMEEAKEKANQRVKSATKEADEILKELRNLRDHKGAEV-------KEHELIDK 614
Query: 764 FQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKE 823
+Q D+ E K IKQ + K+ + + GD V V S+G+KG V+++ E
Sbjct: 615 KKQLD-DQYE---------AKSIKQHVQKKKYDTIHAGDEVKVLSYGQKGEVLEL-VGNE 663
Query: 824 EIVVQVGNMKWIMKFTDI 841
E VVQ+G +K + D+
Sbjct: 664 EAVVQMGIIKMKLPIEDL 681
>sp|Q67QE3|MUTS2_SYMTH MutS2 protein OS=Symbiobacterium thermophilum (strain T / IAM
14863) GN=mutS2 PE=3 SV=1
Length = 793
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 228/802 (28%), Positives = 354/802 (44%), Gaps = 139/802 (17%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGRE-----ATLTQLWSINQTYQDSLRLLDETNAAIEMQ 107
+LR LE+ K+ ++ TSLGRE A T + ET+ A +
Sbjct: 5 TLRTLEFAKIKEMLAERTATSLGREVVESLAPATDFLEVQHRQA-------ETSEARRLY 57
Query: 108 KHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDA 167
+ G ++ L G L +++ ++ R L P + L V S L+ L +E
Sbjct: 58 E-GGHAIPLGG--LHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRRLKRFL----EEQE 110
Query: 168 DLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQ 227
L I LT + L L I Q VDE G ++D ASPAL + R +++L+ ++ +
Sbjct: 111 GLPI----LTALSRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAEIRRSMRILQNRMKE 166
Query: 228 LMDMLIRNENNESLFLEVSSI-HGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAV 284
+D +R + L + +I GR + + + G++ S+SG IEP++ V
Sbjct: 167 RLDAFVRGSAAKYLQDPIVTIREGRFVVPVKIEYRAQVPGIVHDQSASGSTLFIEPMAIV 226
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 344
+N++L++ + E +L L+ + + D + L + Q+D +A+ SL
Sbjct: 227 EMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQAVAQIDFASAKGKLSLDLDC 286
Query: 345 TSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLES 404
T P + RE + + K HPLL
Sbjct: 287 TEPELV----------------------REPILEIHKGRHPLL----------------- 307
Query: 405 ANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPN 464
KG + P ++ + + D + ITGPN
Sbjct: 308 -----------------KG----RVVPIDVHIG-------ITFDTLV--------ITGPN 331
Query: 465 TGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLK 524
TGGKT+ LKT+GL V+MA++GLH+ + +V F VF DIGDEQS+ QSLSTFSGH+
Sbjct: 332 TGGKTVALKTMGLFVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMT 391
Query: 525 QIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTL 584
I I+ +LVLLDE+GAGT+P EG AL MS+LE + G+ T+ATTH+ ELKT
Sbjct: 392 NIIRILDALEGPALVLLDELGAGTDPTEGAALAMSILEHLHKRGA-KTVATTHYSELKTY 450
Query: 585 KYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAAS 644
Y+ ENA +EFD L+PT+++L GVPG S+A I+ RLGL +V ARQ
Sbjct: 451 AYTRSRVENASVEFDVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQF----- 505
Query: 645 AEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRK--VQ 702
+ E ER + ++ +H R L R L +QR R+ +
Sbjct: 506 -----LTQEQERVE-DLIQGIHATRAELEKERAEAHRL---------RAEAQRMREEYER 550
Query: 703 KISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTS 762
+ DA A V K+ Q A Q + + A+ + Q+L + + + S
Sbjct: 551 RYGDAQRKAAETVEKARAQ----AQQILATARREAEAVIAELKQALREQREAERMQAIQS 606
Query: 763 NFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP---NVGDLVHVSSFGKKGTVIKVE 819
+ A A +V ++ +R E+P GD V V S G V+
Sbjct: 607 ARSRL--------ARARQAVEPTEEEQRARRRGEVPRGLKPGDKVRVVSLDTTGYVLSEP 658
Query: 820 PSKEEIVVQVGNMKWIMKFTDI 841
+ ++VQ G +K + TD+
Sbjct: 659 DADGNVLVQAGILKMTVSLTDL 680
>sp|Q74KU8|MUTS2_LACJO MutS2 protein OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1
/ NCC 533) GN=mutS2 PE=3 SV=1
Length = 788
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 222/793 (27%), Positives = 377/793 (47%), Gaps = 131/793 (16%)
Query: 57 LEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCSLDL 116
LE++++ +S A T +E LT + S N DE +I+ + S L +
Sbjct: 9 LEYNRIIKQLSDLAITVPAKEQALTLMPSSN---------FDEVKKSIDQTRVLSNVLRV 59
Query: 117 TG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
G D V+++++ ++ + L E + +L ++ +S A E+ ++ R
Sbjct: 60 KGPMPITDFKDVRASLKRLKVKANLNGEELGNIFLILSLAK--DVSQFTADLEEREIDTR 117
Query: 173 FMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDML 232
P+ + + L + L K + Q ++ DG++KD+AS L Q R +Q E + M+
Sbjct: 118 --PIEKTLKNLAIPEDLFKKLNQAIEYDGTVKDTASSKLMQLRHDIQSNETDIKNHMNDY 175
Query: 233 IRNENNESLFLEVSSIH-GRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPLNDE 289
I ++ + L + +I GR + + + F G++ S+SG +EP + + LN+
Sbjct: 176 ISGKHTQYLSENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQTLFVEPQAVLVLNNR 235
Query: 290 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 349
Q A + +L+ L+E + EI+ + + QLD ++A++ + + T P
Sbjct: 236 QQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP-- 293
Query: 350 FLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESANTEL 409
L QD I L KA HPL+
Sbjct: 294 VLNQD--------------------HVIKLRKARHPLI---------------------- 311
Query: 410 RRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTGGKT 469
P ++ VP +I + ++ITGPNTGGKT
Sbjct: 312 --------------------DPKKV----------VPNNIELGTSFDTMLITGPNTGGKT 341
Query: 470 ICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNI 529
I LKT+GL +MA++GL I + E +++ F+ ++ADIGDEQS+ QSLSTFS H+ QI I
Sbjct: 342 ITLKTLGLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKI 401
Query: 530 ISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSND 589
+ T LVL+DE+GAGT+P EG +L +++L+ + + + I TTH+ ELK Y+
Sbjct: 402 MKDVTEDDLVLIDELGAGTDPEEGASLAIAILDDLRGAQAKIAI-TTHYPELKLYGYNRA 460
Query: 590 FFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINE 649
NA MEFD KL PTY++ G+PG+S+A IA +LG+ +VV AR L ++IN+
Sbjct: 461 RTTNASMEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEVVVDKARSLMNDEDSDINK 520
Query: 650 VIIEMERF--KTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDA 707
+I ER +T+ E +HE L +N+ +++ T ++ L++ ++VQK +
Sbjct: 521 MI---ERLTEQTKAAEQLHET-----LKQNVDQSI--TLKRQLQNGLDWYNQQVQKQLEK 570
Query: 708 AAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQT 767
A K+ + L +A +++ +Q R A + KV + + L
Sbjct: 571 AQ------EKADEMLAKKRQKADKIINDLEEQRR--AGGQVRTNKVIEAKGALNKL---- 618
Query: 768 TVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVV 827
+ E+ A + V++ R KR +VGD V V S+G++G + K + + E V
Sbjct: 619 ---ERENQNLAQNKVLQ------REKRRHDVSVGDTVKVLSYGQQGVITK-KLADHEFEV 668
Query: 828 QVGNMKWIMKFTD 840
Q+G +K +K TD
Sbjct: 669 QIGILK--VKVTD 679
>sp|Q88V16|MUTS2_LACPL MutS2 protein OS=Lactobacillus plantarum (strain ATCC BAA-793 /
NCIMB 8826 / WCFS1) GN=mutS2 PE=3 SV=1
Length = 787
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 234/803 (29%), Positives = 384/803 (47%), Gaps = 142/803 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L LE+ ++ ++ + ++ G++A L +L + + D R LDETN
Sbjct: 6 LNTLEYQQVKQQLAPYLVSATGQQA-LNELHPMT-SVADIQRALDETN------------ 51
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQFSETLQLS--LR---------A 161
G ++ +K I V R + ++P+ + LA+ A L SE Q+ LR A
Sbjct: 52 ---DGAEVYRLKGGI-PVARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFA 107
Query: 162 AIKEDA-DLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQM 220
+ EDA + IR L + +L + K + ++ DG I D ASP L + R ++
Sbjct: 108 ELLEDAPENDIRH--LFDEVAELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRR 165
Query: 221 LERKLYQLMDMLIRNENNESLFLEVSSI-HGRLCIRTGADQLS-FKGLLLS-SSSGIGSV 277
E ++ M R + + L + +I + R I A+ S F G++ S+SG
Sbjct: 166 TETEIRNQMGHYTRGHDAKYLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLF 225
Query: 278 IEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARAT 337
IEP + + +ND L+Q + + + E+ +L L+ + DEI + D +NA+A
Sbjct: 226 IEPQAVMAMNDRLRQNQVAEKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKAR 285
Query: 338 YSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQ 397
Y+ T P + PQ+ +YL +A HPL
Sbjct: 286 YAHDMKATEPAVS-PQN---------------------EVYLRQARHPL----------- 312
Query: 398 AWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRV 457
+ P ++ V DI + +
Sbjct: 313 -------------------------------IDPRKV----------VANDISLGTDYQA 331
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
+VITGPNTGGKTI LKT+GL +MA+SGL I ++V ++ +FADIGDEQS+ Q+LS
Sbjct: 332 MVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H++ I + ++Q + SLVL+DE+GAGT+P EG AL +++L+A G+ + +ATTH
Sbjct: 392 TFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQV-VATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK ++ NA MEFDE LKPTY++L G+PGRS+A++IA+RLG+P +V AR
Sbjct: 451 YPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQAR 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
L S ++N +I ++ + Q + + + S LH+ L E A Q+
Sbjct: 511 SLTDTDSQDLNAMIADLVTKRKQVEDEQLHLKTQVADSEKLHRQLKS------EFNAYQQ 564
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
RK Q I DA A ++V + S ++A +++ ++ S + ++ ++ +
Sbjct: 565 -RKDQLIEDAKVQANTIVEQ-------SKTKADAIISDLRKKQLASGTATVKENELIDAK 616
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L + QQ P + V++ R K + GD V V S+G++G +++
Sbjct: 617 GALNALEQQ--------PKLKKNRVLR------RAKAQHDFHEGDDVLVKSYGQRGVLMR 662
Query: 818 VEPSKEEIVVQVGNMKWIMKFTD 840
+ K E VQ+G +K MK +D
Sbjct: 663 -QMGKHEWEVQLGILK--MKISD 682
>sp|B8D298|MUTS2_HALOH MutS2 protein OS=Halothermothrix orenii (strain H 168 / OCM 544 /
DSM 9562) GN=mutS2 PE=3 SV=1
Length = 791
Score = 236 bits (603), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 225/395 (56%), Gaps = 42/395 (10%)
Query: 444 PVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVF 503
PVPIDI + + + LVITGPNTGGKT+ LKTVGL V+M ++GLHI + E + F+ V+
Sbjct: 321 PVPIDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVY 380
Query: 504 ADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEA 563
ADIGDEQS+ Q+LSTFS H+ +I + ++ ++SLVLLDEIG GT+P EG ALG+++LE
Sbjct: 381 ADIGDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEH 440
Query: 564 FAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIA 623
E G + TIATTH+ E+K+ YS D ENA +EFD L+PTY++L G+PG S+A IA
Sbjct: 441 LRERG-VTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIA 499
Query: 624 ERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLL 683
+LGLP ++++ ++L ++ +I ++ E + + L + + L
Sbjct: 500 LKLGLPHDIIKDGKELMSGDDIKVENIISDLN----------EERKKYEQLKIEIEERLE 549
Query: 684 RTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 743
++K Q++ + ++D + L+ ++ ++ Q ++ +
Sbjct: 550 AVKKK------EQKYDSL--LTDLEKRKKKLITEAREEAL--------------QIIKKT 587
Query: 744 ASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATAS-SSVVKDI--KQSPRVKRTELPNV 800
+S + KN+ + ++ +D+VE+ + K+I K+ + RT + +
Sbjct: 588 RKESKEILRRLKNKEFAS----RSDIDRVENEINLNLKETEKEISEKRQNKDGRTRVKEI 643
Query: 801 --GDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 833
GD V + G+KG VI V+ K E V+Q G MK
Sbjct: 644 SCGDQVRLKKTGQKGEVISVDREKGEAVIQAGIMK 678
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 12/303 (3%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
SL +LE+DK+ V FA T +G+E +++L ++ +L + ++A ++++G
Sbjct: 5 SLEILEFDKIIDRVQEFAATIIGKE-IISRLQPVDNLNYVKNKLREVSSAREILEEYGRP 63
Query: 113 SLDLTGV-DLSLVKSAIREVRRASPLRPNEALAVVALLQ-FSETLQLSLRAAIKEDADLY 170
G+ DL + I + + L E + V + L+ E + S D +L
Sbjct: 64 PF--GGIRDL---REIIEKADKGIVLSVKEVMDVRSTLEGVRELKKYSREIGTGIDDELQ 118
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+ +T+ +L + L I + +DE G IKDSAS L+ R ++ +E K+ ++
Sbjct: 119 DIYSIITEKFDRLTPLKQLENEINRCIDEHGEIKDSASRKLRSIRREMDRIEGKINDKLN 178
Query: 231 MLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVPL 286
+I N + + + + +I G R + + + +F G++ S+SG+ +EP++ V L
Sbjct: 179 SIINNTRYQEMLQDKLVTIRGNRYVVPVKSSYKNTFSGIVHDQSTSGLTYFMEPMAIVKL 238
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+ L + + + + +L L+E ++ ++ L + LDV ARA +S+ G
Sbjct: 239 NNRLGELKRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIE 298
Query: 347 PNI 349
P I
Sbjct: 299 PGI 301
>sp|P94545|MUTS2_BACSU MutS2 protein OS=Bacillus subtilis (strain 168) GN=mutSB PE=3 SV=2
Length = 785
Score = 236 bits (602), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 232/795 (29%), Positives = 371/795 (46%), Gaps = 126/795 (15%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREA--TLTQLWSINQTYQDSLRLLDETNAAIEMQKHGS 111
L LE+ K+ V A +SLG+E L SI++ + L +DE + I ++
Sbjct: 6 LSALEFHKVKEQVIGHAASSLGKEMLLELKPSASIDEI-KKQLDEVDEASDIIRLRGQAP 64
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L ++ A+R S L P+E + LL + ++ + ++ D+
Sbjct: 65 FG------GLVDIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAEDGVDI-- 116
Query: 172 RFMPLT-QMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
PL Q QL L + I +D+ G + D AS L+ R Q++ LE ++ ++
Sbjct: 117 ---PLIHQHAEQLITLSDLERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRVRDRLE 173
Query: 231 MLIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL--SSSSGIGSVIEPLSAVPL 286
++R+ + + + V+ + R I + S G ++ +SSSG IEP + V +
Sbjct: 174 SMLRSSSASKMLSDTIVTIRNDRFVIPVKQEYRSSYGGIVHDTSSSGATLFIEPQAIVDM 233
Query: 287 NDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTS 346
N+ LQQA+ + E +L LTEK +E+ L + LD + A+A Y+ + T
Sbjct: 234 NNSLQQAKVKEKQEIERILRVLTEKTAEYTEELFLDLQVLQTLDFIFAKARYAKAVKAT- 292
Query: 347 PNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESAN 406
+P+ + I L KA HPLL
Sbjct: 293 ---------------KPIMNDTG------FIRLKKARHPLL------------------- 312
Query: 407 TELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNTG 466
P ++ V DI + R +VITGPNTG
Sbjct: 313 -----------------------PPDQV----------VANDIELGRDFSTIVITGPNTG 339
Query: 467 GKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQI 526
GKT+ LKT+GL +MA+SGLHI + E ++ F+ VFADIGDEQS+ QSLSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 527 GNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKY 586
I+ Q SLVL DE+GAGT+P EG AL MS+L+ + + + +ATTH+ ELK Y
Sbjct: 400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARV-LATTHYPELKAYGY 458
Query: 587 SNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAE 646
+ + NA +EFD L PTYK+L GVPGRS+A I++RLGLP ++ A+ A E
Sbjct: 459 NREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEMTAEHNE 518
Query: 647 INEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISD 706
++ +I +E+ K + E + E + LHK L +++I+E + +K + + +
Sbjct: 519 VDTMIASLEQSKKRAEEELSETESIRKEAEKLHKEL---QQQIIELNS----KKDKMLEE 571
Query: 707 AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQ 766
A ++A+++ + +A ++H +LR K +H + +
Sbjct: 572 AE-------QQAAEKVKAAMKEAEDIIH----ELRTI-----------KEEHKSFKDHEL 609
Query: 767 TTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIV 826
K A + K ++ KR P GD V V +FG+KGT+++ + E
Sbjct: 610 INAKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQKGTLLE-KTGGNEWN 666
Query: 827 VQVGNMKWIMKFTDI 841
VQ+G +K +K D+
Sbjct: 667 VQIGILKMKVKEKDL 681
>sp|A3DE67|MUTS2_CLOTH MutS2 protein OS=Clostridium thermocellum (strain ATCC 27405 / DSM
1237) GN=mutS2 PE=3 SV=1
Length = 793
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 216/392 (55%), Gaps = 32/392 (8%)
Query: 445 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 504
VPID +I LV+TGPNTGGKT+ LKTVGL +M ++GLHI ++E K+ F V+A
Sbjct: 318 VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYA 377
Query: 505 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 564
DIGDEQS+ QSLSTFS H+K I I+ SLVL DE+GAGT+P EG AL MS+LE
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVLFDELGAGTDPTEGAALAMSILEYL 437
Query: 565 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 624
GS T+ATTH+ +LK + F ENAC EF+ L+PTY++L GVPG+S+A I++
Sbjct: 438 RNKGS-TTVATTHYSQLKAYAVTTKFVENACCEFNVETLRPTYRLLIGVPGKSNAFAISK 496
Query: 625 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
RLGL +++ A++ + ++++ +E+ Q +A + + + L K L
Sbjct: 497 RLGLFDDIIEKAKEFLTQDDIKFEDMLMSIEKNLNQSENEKMKAESYRLEAEKLKKELEE 556
Query: 685 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 744
+RK+ E+ R R +Q +A A AR ++ ++ ++ S+ R L
Sbjct: 557 QKRKLAEN----RERLIQ---EARAEARKILLEARKEAEEIISKMRRL------------ 597
Query: 745 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPR---VKRTELPNVG 801
Q +H + K L ++ VD +E ++ +P+ VK E G
Sbjct: 598 EQEVHNAQRQKEAEELRLKLKR-KVDSIEETL--------ELPLAPKNALVKPPENLKPG 648
Query: 802 DLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 833
D V + + +KGTVI E+VVQ G MK
Sbjct: 649 DSVLIVNLDQKGTVITPPDKDGEVVVQAGIMK 680
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 146/303 (48%), Gaps = 19/303 (6%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHG 110
++L++LE++K+ + S A +SLG+E L + + R ET+ A+ + + G
Sbjct: 4 KTLKILEFNKIIDKLVSLATSSLGKE--LAEKLVPDTDLNRVERAQKETSDAVAFIARRG 61
Query: 111 SCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQ-LSLRAAIKEDADL 169
+ + + ++ +++ V + L P E L +L+ L+ + IK D D
Sbjct: 62 TPPMG----GIHDIRDSLKRVEIGAILNPGELLKTADVLRAVRNLKSYASNDRIKTDEDN 117
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSI-MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQL 228
+ +++I L N+ + I M ++ ED I D+ASP L R Q++ + +
Sbjct: 118 IV-----SELIGCLESNKRIEDRIYMSILSED-EIADNASPTLANIRRQIRNAQESIKDK 171
Query: 229 MDMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLL-SSSSGIGSVIEPLSAV 284
++ +IR+ + E + ++ G R I + + GL+ SS+SG IEP++ V
Sbjct: 172 LNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIPGLIHDSSASGATIFIEPMAVV 231
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 344
N+ +++ + E +L LT +++ +D ++ ++ + +LD + A+A SL +
Sbjct: 232 EANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILGRLDFIFAKARLSLDYNC 291
Query: 345 TSP 347
P
Sbjct: 292 VCP 294
>sp|B9DVK7|MUTS2_STRU0 MutS2 protein OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J)
GN=mutS2 PE=3 SV=1
Length = 777
Score = 233 bits (595), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 232/401 (57%), Gaps = 45/401 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L +PV D+ A V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ E +K+ FD
Sbjct: 307 LKNPVANDLHFADDLAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFD 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
+++ADIGDEQS+ QSLSTFS H+ I +I+ +S S SLVL DE+GAGT+P EG +L M++
Sbjct: 367 AIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNSNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE + ++ T+ATTH+ ELK +D+ ENA MEFD LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMER---FKTQFLEHVHEARHFLMLSRN 677
IA RLGL +V+ A Q+ S ++N +I E+ER + L+H+ E N
Sbjct: 486 EIARRLGLAETIVKEAEQMTDTDS-DVNRIIEELERQTLSSRRRLDHIREVEQ-----EN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 737
+ N R +K+ + + ++++K S A L ++++ S +H++A
Sbjct: 540 IKFN--RAVKKLYNEFSLAKDKEIEKASQEAQAIVELALTESEEIL-------SKLHEKA 590
Query: 738 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 797
+L+P H K++ ++ V + + K +++
Sbjct: 591 -ELKP------HEIIEAKSK-------LKSLVPQRDLSKNKVLKKAKKLRE--------- 627
Query: 798 PNVGDLVHVSSFGKKGTVI-KVEPSKEEIVVQVGNMKWIMK 837
P +GD + VS++G++GT+I +V+ +K E QVG +K +K
Sbjct: 628 PRIGDDIIVSAYGQRGTLIGQVKGNKWE--AQVGLIKMTLK 666
>sp|B9MK78|MUTS2_CALBD MutS2 protein OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888
/ DSM 6725 / Z-1320) GN=mutS2 PE=3 SV=1
Length = 787
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 218/796 (27%), Positives = 371/796 (46%), Gaps = 123/796 (15%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSIN-QTYQDSLRLLDETNAAIEMQKHG 110
++L+ LE+DK+ + + A+++ +E + S N ++ L +DE+ + K+G
Sbjct: 4 KTLKALEYDKIVEILKNMAKSTPAKEYFENLIPSTNVADIENELNKVDESYRYV--LKYG 61
Query: 111 SC-SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
+ +L+ + SL KS + + L P+E L + +L+ S ++ L + +D
Sbjct: 62 NLPTLEFENILPSLKKSKL-----GATLNPHEILQIGKVLKLSYEMRTYL--SFTQD--- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
F L M +L + +I I Q I D+AS LK+ R +++ LE K+ +
Sbjct: 112 ---FSFLESMKKRLVNLKEVISRIDQTFLTPDEILDTASSKLKEIRDKIRKLENKIRDEL 168
Query: 230 DMLIRNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLLS-SSSGIGSVIEPLSAVP 285
+ +IR+ + E + +I G +L + A+ + KG++ S++G +EP V
Sbjct: 169 NSMIRDPKIQRFLQEPIITIRGEKLLLPVKAEFRNEVKGIVHDQSATGATLFVEPFVCVE 228
Query: 286 LNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGT 345
++++++ + + E +L ++ + + IE +++LD+V +A ++ +
Sbjct: 229 ISNQIKILKNQEKEEIERILQEISSLIASYCEVIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 346 SPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLESA 405
P I I L KA HPL+
Sbjct: 289 KPII----------------------NASGIINLKKARHPLI------------------ 308
Query: 406 NTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGPNT 465
+KD +V +++ D+ I ITGPNT
Sbjct: 309 ------------------QKD--------KVVPIDIHLGKDFDVLI--------ITGPNT 334
Query: 466 GGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQ 525
GGKT+ LKTVGL ++ +SG+ I + E +++ F +FADIGD+QS+ QSLSTFS H+K
Sbjct: 335 GGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIFQKIFADIGDDQSIVQSLSTFSAHMKN 394
Query: 526 IGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLK 585
I I + ++LVLLDEIGAGT+P EG AL ++L+ +E GS + IATTH+GELK
Sbjct: 395 IIEITKNADDKTLVLLDEIGAGTDPEEGAALAKAILKYLSEKGSKV-IATTHYGELKIFA 453
Query: 586 YSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASA 645
D FENA EFD LKPTY++L G+PGRS+A+ I+ LGL +V+ AR +
Sbjct: 454 QQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNALVISSNLGLDKGIVEMARGYLSQKTI 513
Query: 646 EINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKIS 705
+++ +I EME+ + + E++ A+ ++ L +++ +R RK
Sbjct: 514 DLDRIINEMEQKRKEAEENLELAQKLKHEAQALKAAYEEEKKRF--ETERERIRK----- 566
Query: 706 DAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQ 765
A A+ +V S ++ R L A+ L+ K + + ++ S Q
Sbjct: 567 KAINEAKEIVESSQYEIENLFKDLRKL----AENLKEKEVLKELEEKKREYERLIQSISQ 622
Query: 766 QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEI 825
Q VK +S K + +G V+V SF +G V + SK +
Sbjct: 623 Q----------------VKQEAESKTKKTIQNLRLGQKVYVRSFDAEGFVESLPDSKGNL 666
Query: 826 VVQVGNMKWIMKFTDI 841
VQ+G MK + +DI
Sbjct: 667 TVQIGIMKINVNLSDI 682
>sp|Q045P1|MUTS2_LACGA MutS2 protein OS=Lactobacillus gasseri (strain ATCC 33323 / DSM
20243) GN=mutS2 PE=3 SV=1
Length = 791
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 220/807 (27%), Positives = 380/807 (47%), Gaps = 135/807 (16%)
Query: 43 DDKKSRVVYESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNA 102
+D S+++ + LE++++ +S A T+ + L + S + DE
Sbjct: 2 EDMNSKIIEK----LEYNRIIRQLSDLAITAPAKAQALKLMPSSD---------FDEVKK 48
Query: 103 AIEMQKHGSCSLDLTG----VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLS 158
+I+ + S L + G D V+ +++ ++ + L E + +L ++ +
Sbjct: 49 SIDQTRVLSNILRVKGPMPITDFKDVRPSLKRLKVKANLNGEELGNIFLVLSLAK--DVG 106
Query: 159 LRAAIKEDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQV 218
A+ E+ ++ R P+ + + L V L K + Q ++ DG++KD+AS L Q R +
Sbjct: 107 QFASDLEEREIDTR--PIEKYLKNLAVPEDLFKKLNQAIEYDGTVKDTASSKLMQLRHDI 164
Query: 219 QMLERKLYQLMDMLIRNENNESLFLEVSSIH-GRLCIRTGAD-QLSFKGLLLS-SSSGIG 275
Q E + M+ I ++ + L + +I GR + + + F G++ S+SG
Sbjct: 165 QSNETDIKNHMNDYISGKHTQYLSENIVTIRDGRYVLPVKQEYKNKFGGVVHDQSASGQT 224
Query: 276 SVIEPLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNAR 335
+EP + + LN+ Q A + +L+ L+E EI + QLD ++A+
Sbjct: 225 LFVEPQAVLVLNNRQQNLLAQERQEIHRILIELSELAGAYQKEINNNALALTQLDFLSAK 284
Query: 336 ATYSLSFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKT 395
+ + T P L QD I L KA HPL+
Sbjct: 285 SKLAKKMKATEP--VLNQD--------------------HIIKLRKARHPLI-------- 314
Query: 396 QQAWKDLESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKT 455
P ++ VP +I +
Sbjct: 315 ----------------------------------DPKKV----------VPNNIELGTTF 330
Query: 456 RVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQS 515
++ITGPNTGGKTI LKT+GL +MA++GL I + E +++ F+ ++ADIGDEQS+ QS
Sbjct: 331 DTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQS 390
Query: 516 LSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIAT 575
LSTFS H+ QI I++ T LVL+DE+GAGT+P EG +L +++L+ ++ + + I T
Sbjct: 391 LSTFSSHMDQIIKIMNNVTEDDLVLIDELGAGTDPEEGASLAIAILDDLRQTQAKIAI-T 449
Query: 576 THHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQN 635
TH+ ELK Y+ NA MEFD KL PTY++ G+PG+S+A IA +LG+ VV
Sbjct: 450 THYPELKLYGYNRKRTTNASMEFDLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEAVVDK 509
Query: 636 ARQLYGAASAEINEVIIEMERF--KTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHC 693
AR L ++IN++I ER +T+ E +HE L +N+ +++ T ++ L++
Sbjct: 510 ARDLMNDEDSDINKMI---ERLTEQTKAAEQLHET-----LKQNVDQSI--TLKRQLQNG 559
Query: 694 ASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKV 753
++VQK + + K+ + L QA +++ +Q R A + KV
Sbjct: 560 LDWYNQQVQKQLEKSQ------EKADEMLAKKRKQAEKIINDLEEQRR--AGGQVRTNKV 611
Query: 754 GKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKG 813
+ + L + E+ A++ V++ R K+ +VGD V V S+G++G
Sbjct: 612 IEAKGALNKL-------ERENQNLANNKVLQ------REKKRHDVSVGDNVKVLSYGQQG 658
Query: 814 TVIKVEPSKEEIVVQVGNMKWIMKFTD 840
+ K + + E VQ+G +K +K TD
Sbjct: 659 VITK-KLGEHEFEVQIGILK--VKVTD 682
>sp|Q189Q3|MUTS2_CLOD6 MutS2 protein OS=Clostridium difficile (strain 630) GN=mutS2 PE=3
SV=1
Length = 792
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 222/392 (56%), Gaps = 31/392 (7%)
Query: 449 IFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGD 508
I++ R LVITGPNTGGKT+ +KTVGL +M +SGLHI + + + +D+VFADIGD
Sbjct: 322 IYLGRDFHTLVITGPNTGGKTVTIKTVGLFALMTQSGLHIPADYGSSMCVYDNVFADIGD 381
Query: 509 EQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESG 568
EQS+ QSLSTFS H+ I +I+ T+ SLV+ DE+GAGT+P+EG AL +++LE G
Sbjct: 382 EQSIEQSLSTFSSHMTNIVSILQNVTADSLVIFDELGAGTDPVEGAALAIAVLEDINSVG 441
Query: 569 SLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGL 628
+ IATTH+ ELK + ENA +EFD L PTYK+L GVPG+S+A I+ +LGL
Sbjct: 442 A-KCIATTHYSELKNYALTKSGVENAAVEFDIETLSPTYKLLIGVPGKSNAFEISRKLGL 500
Query: 629 PGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRK 688
V+ A++ + + +V+ +E+ + + +E EA L + K + K
Sbjct: 501 SDYVISRAKEYINTENIALEDVLQNVEKNRIKAVEDREEAER---LKEEIEKLKVEYDEK 557
Query: 689 ILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSL 748
LE SQR + ++K A + A S++ ++ +++ + RSL +RA + + + L
Sbjct: 558 -LEKLVSQRDKMIEK---AKSEAFSIIRQAKEEVDIIIKELRSLEQERASKEKNRKIEEL 613
Query: 749 HCTKVGKNQHVLTSNFQ--QTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHV 806
+ LTS+ Q TV + P S+ +KD+K G+ V V
Sbjct: 614 --------RKELTSSMGSLQPTVKSMIVPK-VSNKEIKDLKP------------GEEVKV 652
Query: 807 SSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKF 838
+ + G+V+ V+ ++E VVQ+G MK + F
Sbjct: 653 ITLNQNGSVVSVDKKRKEAVVQIGIMKMTLPF 684
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 160/348 (45%), Gaps = 29/348 (8%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSI--NQTYQDSLRLLDETNAAIEMQ-K 108
+SLRVLE++K+ + A +SLG L + ++ N + + +L+ET+ A + K
Sbjct: 4 KSLRVLEYNKIIDLLKKKASSSLG----LKYIENLVPNTDFVEVKSMLEETSEAQSIIIK 59
Query: 109 HGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDAD 168
GS L+ + ++ ++ + L P + + L+ + L+ SL ++ +ED +
Sbjct: 60 RGSVGLE----GIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARRLRNSLSSSDEEDFN 115
Query: 169 LYIRFMPLTQMIMQ-LFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQ 227
P+ Q + L+V + + I + + I D+AS L+ R ++ + +
Sbjct: 116 -----YPIIQSLSNSLYVYKDIEDQIYNAIISEVEISDNASSILRDIRRRIAQKNQSIRS 170
Query: 228 LMDMLIRNENNESLFLE-VSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLSA 283
++ +I + + + + S+ G R + ++ S G++ SSSG IEP++
Sbjct: 171 KLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVAGIVHDQSSSGATLFIEPMTI 230
Query: 284 VPLNDELQQARASVTKAEEDV---LLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 340
V +N+EL+Q + + E + L A+ ++ DL +++L +LD ++ S+
Sbjct: 231 VEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG---RLDFAFSKGKLSI 287
Query: 341 SFGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLL 388
G P + + + P+ K TIYL + +H L++
Sbjct: 288 QMRGIEPTLNEDKYLNIKNGRHPLLDKKKVVAN--TIYLGRDFHTLVI 333
>sp|Q38YN3|MUTS2_LACSS MutS2 protein OS=Lactobacillus sakei subsp. sakei (strain 23K)
GN=mutS2 PE=3 SV=1
Length = 787
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 38/417 (9%)
Query: 432 SEMQVSALELAHP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKS 484
+E V + HP V DI I + +V+TGPNTGGKTI LKT+GL +MA+S
Sbjct: 297 AENHVDLKQARHPLIDATKVVANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQS 356
Query: 485 GLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEI 544
GL I + E ++V F +FADIGDEQS+ Q+LSTFS H++ I I+ Q +SLVLLDE+
Sbjct: 357 GLFITAREESQVGVFSDIFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDEL 416
Query: 545 GAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLK 604
GAGT+P EG AL +++L+ G+ + +A+TH+ ELK Y+ NA MEFD L+
Sbjct: 417 GAGTDPQEGAALAIAILDQIGIVGANV-VASTHYPELKIYGYNRPQTINASMEFDVATLQ 475
Query: 605 PTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEH 664
PTY++L GVPGRS+A +I+ RLGLP +V A+QL S ++N +I ++E +
Sbjct: 476 PTYRLLIGVPGRSNAFDISTRLGLPNSIVDQAKQLMNDESQDLNNMITDLENQRKAAETE 535
Query: 665 VHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCP 724
RH L + +LH+ L ++ E ++ + +K A ++V K+ +
Sbjct: 536 YQALRHELTEATDLHQQLSTAYQQFFEDRETEMTKAKEK-------ANAIVEKAEVKADK 588
Query: 725 SASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVK 784
++ R + + Q++ + Q K E + +K
Sbjct: 589 VITKLRDMQMNQGAQIKEN----------------------QLIDAKAELGQLHQETTLK 626
Query: 785 DIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
K R KR + VGD V V+S+G++GT+I+ SK VQ+G +K + D+
Sbjct: 627 KNKVLQRAKRRQTLKVGDDVLVTSYGQRGTLIRQVDSK-NWEVQMGIIKMKIANDDL 682
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 34/310 (10%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + +A T+ G+E T L IN+ +RL ++T
Sbjct: 6 LKTLEYDKIKQMLQGYAITAFGQEQIAT-LEPINEADLIQIRL-NQTK------------ 51
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPN-EALAVVALLQFSETLQLS--LRAAIK------ 164
GVD+ +K I + + +RP+ + + + A+L SE Q+ LRA
Sbjct: 52 ---DGVDIERLKGGI-PLPQLENIRPHLKRIEIGAMLNGSELAQIGRVLRATSAVVRFFD 107
Query: 165 --EDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLE 222
E +L ++ +P +++ Q L + I V +DG+I D+AS L+ R ++ LE
Sbjct: 108 DLEKDELELKALP--ELVAQFVTLPQLTERIRSSVADDGAILDTASTKLRGLRTGLKQLE 165
Query: 223 RKLYQLMDMLIRNENNESLFLEVSSI-HGRLCIRTGAD-QLSFKGLLLS-SSSGIGSVIE 279
++ M + L + +I + R I + + F G++ S+SG +E
Sbjct: 166 GQIRSRMASYTHGAKAKYLSDPIVTIRNDRYVIPVKQEYRGQFGGVVHDQSASGQTLFME 225
Query: 280 PLSAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYS 339
P + + LN+ L+Q + + E +L L+E + + I + QLD VNA+A +
Sbjct: 226 PQAIMELNNRLRQLQIEEQQEIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLA 285
Query: 340 LSFGGTSPNI 349
+ T P I
Sbjct: 286 KALKATEPLI 295
>sp|Q0TP77|MUTS2_CLOP1 MutS2 protein OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=mutS2 PE=3 SV=1
Length = 786
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 201/698 (28%), Positives = 327/698 (46%), Gaps = 120/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L ++ + + D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNMLSVTRKLS-----DFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLSA 283
++ ++R+ N + L + ++ G R I A+ S GL+ SS+G IEP +
Sbjct: 169 DKVNSIVRS-NAQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 284 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 343
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 344 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 403
GT P + E I L A HPL+
Sbjct: 288 GTMPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 404 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 463
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 464 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 523
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 524 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 583
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 584 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 643
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL V++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTE 512
Query: 644 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 703
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 704 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 740
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>sp|Q8XJ80|MUTS2_CLOPE MutS2 protein OS=Clostridium perfringens (strain 13 / Type A)
GN=mutS2 PE=3 SV=1
Length = 786
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 202/698 (28%), Positives = 327/698 (46%), Gaps = 120/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L A ++ +D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNML-----AVTRKLSDFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLSA 283
++ ++R+ N + L + ++ G R I A+ S GL+ SS+G IEP +
Sbjct: 169 DKVNSIVRS-NTQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 284 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 343
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSVLVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 344 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 403
GT P + E I L A HPL+
Sbjct: 288 GTLPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 404 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 463
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 464 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 523
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 524 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 583
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVRIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 584 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 643
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL V++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTE 512
Query: 644 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 703
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 704 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 740
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADAILKNMRDL 594
>sp|A5D0W6|MUTS2_PELTS MutS2 protein OS=Pelotomaculum thermopropionicum (strain DSM 13744
/ JCM 10971 / SI) GN=mutS2 PE=3 SV=1
Length = 785
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 218/397 (54%), Gaps = 30/397 (7%)
Query: 445 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 504
VPIDI + LVITGPNTGGKT+ LKT GL V+MA+SGLHI + E +++ F VFA
Sbjct: 314 VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAGEGSRLGIFRQVFA 373
Query: 505 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 564
DIGDEQS+ QSLSTFS H+ I II ++ SLVLLDE+GAGT+P EG AL S+LE
Sbjct: 374 DIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPAEGAALAQSILEKL 433
Query: 565 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 624
+G+ T+ATTH+GELK + + ENA +EFD + L+PTY++L G PGRS+A IA
Sbjct: 434 HSAGA-KTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIGKPGRSNAFEIAA 492
Query: 625 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
RLGLP VV+ AR A + E++ +E+ + + A +R L +
Sbjct: 493 RLGLPEEVVKRARSFLTAEHIQAEELMRSLEKTQQEAEAERRRAAELASEARALKERY-- 550
Query: 685 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 744
KI AS+R +S AA A++LV + + + + R + + A + R +A
Sbjct: 551 --EKIEADLASKR---ESILSKAAEEAQALVRAARLEAEAAVRELREKMAEEAARERENA 605
Query: 745 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 804
+ K+ K Q + + TV P A + + G+ V
Sbjct: 606 IREAR-EKLRKLQQRVGRAVPEKTV-----PGEAPAGL----------------RPGEEV 643
Query: 805 HVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
++ + +KG V++ + E++VQVG +K + ++
Sbjct: 644 FLTRYNQKGYVLEPPGAGGEVLVQVGVIKMNVPLREL 680
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 30/306 (9%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
+L+ LE+ K+ +++ + +SLGRE + ++ LD A + Q+ S
Sbjct: 5 ALKRLEYHKVLEQLAACSGSSLGREKIM------------AMEPLDNLQAILRKQEETSE 52
Query: 113 SLDLTGVD-------LSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKE 165
L ++ +++ +R+ + + L P E LAV L T+ R ++
Sbjct: 53 GRKLLRLEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTI----RKFFQD 108
Query: 166 DADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKL 225
+ Y ++ ++ L L + I + G + D ASP L Q R ++ + ++
Sbjct: 109 RQEQYPLLYEVSSALVSL---PELERKIKNAILPGGEVADGASPELAQIRRRLAAAQAQV 165
Query: 226 YQLMDMLIRNENNESLFLE--VSSIHGRLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPL 281
+ ++ +IR+ + + E V+ GR + + S G++ S+SG IEP+
Sbjct: 166 KEHLEHIIRSPSYQKYLQEPIVTIREGRYVVPVKIEHRSQVPGIVHDQSASGATLFIEPM 225
Query: 282 SAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLS 341
+ V N+EL++ A+ + + +L L+ + I L + +LD + ARA YS
Sbjct: 226 AVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELDFIMARARYSQK 285
Query: 342 FGGTSP 347
+P
Sbjct: 286 LDAWAP 291
>sp|Q0SRU6|MUTS2_CLOPS MutS2 protein OS=Clostridium perfringens (strain SM101 / Type A)
GN=mutS2 PE=3 SV=1
Length = 786
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 200/698 (28%), Positives = 327/698 (46%), Gaps = 120/698 (17%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSC 112
LRVLE++K+ V +A T +E L L + Y D L+ET A++ + + G+
Sbjct: 6 LRVLEFNKIKELVKGYAITKSAKEMVL-DLKPYDSVY-DVKEHLEETKEALDILMRKGNP 63
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
+ L VK AI + L++ LL+ L ++ + + D R
Sbjct: 64 PFE----GLYDVKEAITRAEKGG------VLSIEGLLRIGNMLSVTRKLS-----DFLAR 108
Query: 173 FMP------LTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLY 226
L M L V R + +I + + + I DSAS L R ++ +
Sbjct: 109 KEEEEEHRILEGMREGLIVLRGVESAISKAIVSEDEIADSASDKLYSIRRSLKEKNSSIR 168
Query: 227 QLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLSA 283
++ ++R+ N + L + ++ G R I A+ S GL+ SS+G IEP +
Sbjct: 169 DKVNSIVRS-NAQYLQDSLYTVRGDRYVIPVKAEYKSQVPGLVHDQSSTGATLFIEPTAL 227
Query: 284 VPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFG 343
V LN+E+++ E +L L+ + ++D I+ N I++LD + A+A Y G
Sbjct: 228 VNLNNEIKELMLKERAEIERILAELSALVYKNIDVIKVNFNIIVELDFIFAKAKYGSDLG 287
Query: 344 GTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDLE 403
GT P + E I L A HPL+
Sbjct: 288 GTMPIV----------------------NEEGVIDLMDARHPLI---------------- 309
Query: 404 SANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITGP 463
P + VS+ DI++ R+ L+ITGP
Sbjct: 310 ---------------------------PKDKVVSS---------DIYLGREFSTLLITGP 333
Query: 464 NTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHL 523
NTGGKT+ LKT GL +M SGL I +SE + + +F+ +FADIGDEQS+ QSLSTFS H+
Sbjct: 334 NTGGKTVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHM 393
Query: 524 KQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKT 583
I I+ ++ ++S VL DE+GAGT+P EG AL +S+LE G + ++TTH+ ELK
Sbjct: 394 TNIVKIMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRI-MSTTHYSELKG 452
Query: 584 LKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAA 643
+ ENA +EF+ L+PTY++L GVPG+S+A I+ RLGL +++ A+++
Sbjct: 453 YALKTENVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTE 512
Query: 644 SAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQK 703
S + ++I + + + ++ ++AR +L + K + R K ++F +++
Sbjct: 513 SLQFEDLI---QSLQEKSIKAENDAREAAILRNDAEK--YKNRYK-------EKFERIES 560
Query: 704 ISD-AAAIARSLVHKSAQQLCPSASQARSLVHKRAQQL 740
+ D A AR + A+Q+ SA + + K + L
Sbjct: 561 VRDNVYADAR----REAKQILDSAKEEADTILKNMRDL 594
>sp|Q65GE2|MUTS2_BACLD MutS2 protein OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=mutS2 PE=3 SV=1
Length = 785
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 217/403 (53%), Gaps = 33/403 (8%)
Query: 439 LELAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPW 498
L L VP DI + + +VITGPNTGGKT+ LKT+GL MMA+SGLH+ + E ++
Sbjct: 312 LPLDEVVPNDIELGGEYTTIVITGPNTGGKTVTLKTLGLLTMMAQSGLHVPAEEGSETAV 371
Query: 499 FDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGM 558
FD VFADIGDEQS+ QSLSTFS H+ I +I+ T SLVL DE+GAGT+P EG AL +
Sbjct: 372 FDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKDMTENSLVLFDELGAGTDPQEGAALAI 431
Query: 559 SLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSS 618
S+L+ ++G+ + IATTH+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+
Sbjct: 432 SILDEVCQTGARV-IATTHYPELKAYGYNRENVINASVEFDIDTLSPTYKLLIGVPGRSN 490
Query: 619 AINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNL 678
A I++RLGLP ++ A+ A E++ +I +E K + + E + L
Sbjct: 491 AFEISKRLGLPDYLIGRAKAEMTAEHNEVDTMIASLEDSKKRAEAELKETEAIRAEAEAL 550
Query: 679 HKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQ 738
H++ L+ S+ K K+ + A K+A+++ + +A ++
Sbjct: 551 HRD--------LQQQISEWQEKKDKLYEEAE------QKAAEKVKAAMKEADDII----- 591
Query: 739 QLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELP 798
QSL K H + + K A S K Q KR P
Sbjct: 592 -------QSLRMI---KEDHKAFKDHELIEAKKRLEEAVPSFEKAKKPAQKKTDKRELKP 641
Query: 799 NVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
GD V V +FG+KGT+++ + E VQ+G +K +K D+
Sbjct: 642 --GDEVKVLTFGQKGTLLE-KTGAAEWNVQIGILKMKVKEKDL 681
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 126/264 (47%), Gaps = 15/264 (5%)
Query: 53 SLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETN-AAIEMQKHGS 111
+L LE+ K+ ++ A +SLG+E L +++ ++ +L +E + A ++ GS
Sbjct: 5 ALSALEFHKVKEQLTEHAASSLGKEMLLE--LKPSRSLEEVKKLQEEVDEAGTVLRLKGS 62
Query: 112 CSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYI 171
L+ ++ A+R S L P E + LL ++ ++ L ++ ++
Sbjct: 63 APFG----GLTDIRKALRRAEIGSILSPAELTEISGLLYAAKQMKHFLEGLFEDGVEIPY 118
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
L Q +L L + I +D+ G + D AS L+ R Q++ LE ++ ++
Sbjct: 119 ----LHQYAEKLIPLSELERDINSCIDDHGEVLDHASETLRGIRTQLRTLESRIRDRLES 174
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLL--SSSSGIGSVIEPLSAVPLN 287
++R+ + + + + ++ + R I + S G ++ SSSG IEP + V +N
Sbjct: 175 MLRSSSAQKMLSDTIITIRNDRFVIPVKQEYRSSYGGIVHDQSSSGATLFIEPQAIVDMN 234
Query: 288 DELQQARASVTKAEEDVLLALTEK 311
+ L+QA+ + + E +L LTEK
Sbjct: 235 NALRQAKVNEKQEIERILRVLTEK 258
>sp|B9KYW4|MUTS2_THERP MutS2 protein OS=Thermomicrobium roseum (strain ATCC 27502 / DSM
5159 / P-2) GN=mutS2 PE=3 SV=1
Length = 792
Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 292/615 (47%), Gaps = 91/615 (14%)
Query: 52 ESLRVLEWDKL-------C-HSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA 103
E LR+LE+DK+ C +SV+S + A Q+ + + +++ RLL+E
Sbjct: 4 ELLRLLEFDKIRELLAARCQYSVASERAREIAPTADRDQVAYLLRVTREAARLLNE---- 59
Query: 104 IEMQKHGSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAI 163
S + G ++S ++ +R + L P + V+ L+ + SLR
Sbjct: 60 -------RPSFTIGG--FRDIRSVVQAAQRGNILAPADVRTVLDTLEAAA----SLRRQF 106
Query: 164 KEDADLYIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLER 223
D R+ L + ++ + L + + + G + D+ASP L R ++
Sbjct: 107 MADERWSERYPALAEFVLAMVDLPGLRADLARSIGPRGEVLDTASPELAAIRRSLKEAHE 166
Query: 224 KLYQLMDMLIRNENNESLFLEVSSIHGRLCIRTGADQLSFKGLLLSSSSGIGSV--IEPL 281
+L + + L+ V+ GR I AD+ + SG G +EP
Sbjct: 167 RLLERLRRLLAERQEAIQDAYVTIRDGRYVIPVRADRRQAVPGITHDVSGSGQTLFVEPF 226
Query: 282 SAVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLS 341
+ LN+ ++ +A+ T+ E +L LT+++ DE+ +++ LD+ A+A +
Sbjct: 227 EVLELNNRWRELQAAETREIERILRVLTQRIADAADELLQIVEAGAALDLALAKARLAYD 286
Query: 342 FGGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKD 401
P + EP V + L A HPLL ++T
Sbjct: 287 LDAVEPELL-----------EPSGPTVPEGHPFLRVRLRAARHPLL----DRRT------ 325
Query: 402 LESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVIT 461
A P+ ++ + + R+LVIT
Sbjct: 326 ----------------------------------------AVPIDVE--LGERFRILVIT 343
Query: 462 GPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSG 521
GPNTGGKT+ LKTVGL +MA++GL I ++ + + F ++F DIGDEQS+ Q+LSTFS
Sbjct: 344 GPNTGGKTVALKTVGLLALMAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSS 403
Query: 522 HLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGEL 581
H+++I + Q+ + SLVLLDEI AGT+P EG AL ++LE E G+ L I TTH+ EL
Sbjct: 404 HMRRIVATLQQADASSLVLLDEIAAGTDPQEGAALARAILERLLEIGA-LGIVTTHYPEL 462
Query: 582 KTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYG 641
K ENA +EFD V L PTY++L G+PGRS A+ +A RLGLP V+ AR+L G
Sbjct: 463 KVFATGTPGLENASVEFDPVTLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLG 522
Query: 642 AASAEINEVIIEMER 656
+ + +++ +I EM+R
Sbjct: 523 SGAPQLDRLIAEMQR 537
>sp|B4U143|MUTS2_STREM MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain
MGCS10565) GN=mutS2 PE=3 SV=1
Length = 778
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/400 (37%), Positives = 232/400 (58%), Gaps = 43/400 (10%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++ADIGDEQS+ QSLSTFS H+ I I+ Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 677
+IA RLGL +V+ A Q A + ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATNHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 737
L N R +K+ + + ++++K AA AR +V + L S S S +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDMA---LAESES-ILSQLHEKA 590
Query: 738 QQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTEL 797
+ L+P ++ + +H L V + + + V+K + K+
Sbjct: 591 E-LKPH--------EIIEAKHRLKQ--------LVPEQSLSQNKVLK------KAKKWRA 627
Query: 798 PNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 837
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 628 PRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
>sp|A8AUW9|MUTS2_STRGC MutS2 protein OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=mutS2 PE=3 SV=1
Length = 777
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/388 (38%), Positives = 218/388 (56%), Gaps = 40/388 (10%)
Query: 436 VSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILS 490
+ L++ HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL IL+
Sbjct: 297 IQLLQVRHPLIQNAVANDLHFGPDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLPILA 356
Query: 491 SEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNP 550
+ ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAGT+P
Sbjct: 357 DKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAGTDP 416
Query: 551 LEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKIL 610
EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY+ +
Sbjct: 417 QEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTYRFM 475
Query: 611 WGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARH 670
GVPGRS+A IA RLGL ++V +A++ S ++N++I ER + Q L E+R
Sbjct: 476 QGVPGRSNAFEIARRLGLSEVIVSHAQEQTNTDS-DVNQII---ERLEEQTL----ESRK 527
Query: 671 FLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQAR 730
L R + + L+ R + + K +++ A A+ +V L S S+
Sbjct: 528 RLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSESE-- 580
Query: 731 SLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSP 790
S ++LH K ++ + Q + P T S K +KQ+
Sbjct: 581 ------------SILKNLHAKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLKQA- 623
Query: 791 RVKRTELPNVGDLVHVSSFGKKGTVIKV 818
K+ P VGD + V+S+G++GT++K+
Sbjct: 624 --KKNRAPKVGDDILVTSYGQRGTLVKL 649
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 171 IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMD 230
+R L + I + V+ I+ + V++ G I+ AS L + R ++Q E K+ L+
Sbjct: 112 VRLQELNR-IFENLVDFPAIQGSLLAVNDGGFIESFASEELGRIRRKIQENESKVRDLLQ 170
Query: 231 MLIRNENNESLFLEVSSIHGRLCIRT-GADQLSFKGLLLS-SSSGIGSVIEPLSAVPLND 288
+++N+ + V+S +GR + + G++ S+SG IEP + V LN+
Sbjct: 171 EILKNKGDMLADQVVASRNGRNVLPVKNTYRNRIPGVVHDISASGTTIYIEPRAVVNLNE 230
Query: 289 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 348
E+ +A +L L+ ++ EI I LD+V A+ + G P
Sbjct: 231 EISNYKADERYELLRILQELSAMIRPHAAEIANNAWIIGHLDLVMAKLAFMRERGAVVPA 290
Query: 349 I 349
I
Sbjct: 291 I 291
>sp|C0MEM8|MUTS2_STRS7 MutS2 protein OS=Streptococcus equi subsp. zooepidemicus (strain
H70) GN=mutS2 PE=3 SV=1
Length = 778
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 230/401 (57%), Gaps = 45/401 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 677
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 737
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 738 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 796
+ L+P ++ H K + L+ N K +KQ+ K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN--------------------KVLKQA---KKWR 626
Query: 797 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 837
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 194 MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNEN---NESLFLEVSSIHG 250
+Q +++ G ++ ASP L+ R Q+ E QL+ +++ + +ESL ++S +G
Sbjct: 134 LQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDILKKQAAYLSESL---IASRNG 190
Query: 251 R--LCIRTGADQLSFKGLLLSSSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLAL 308
R L ++ + S+SG IEP + V LN+EL Q +A +L L
Sbjct: 191 RSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQADERHEIGRILHEL 250
Query: 309 TEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 349
+E+++ + + LD+V A+ Y + T P I
Sbjct: 251 SEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVPVI 291
>sp|Q03ES2|MUTS2_PEDPA MutS2 protein OS=Pediococcus pentosaceus (strain ATCC 25745 /
183-1w) GN=mutS2 PE=3 SV=1
Length = 785
Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 191/642 (29%), Positives = 301/642 (46%), Gaps = 103/642 (16%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L VLE+DK+ S+ F T G + LR L ++ E++ +
Sbjct: 6 LDVLEYDKIKQSIRQFIATENGTK---------------ELRELVPSSDETEVRNALKQT 50
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQL-----SLRAAIKEDAD 168
LD V++ +K+ I R + L + A L E Q+ + R I D
Sbjct: 51 LD--AVNIYRLKNGIPVPRLEDVTEALQRLKIDAALNGQELAQIGRILRATRTVINFFDD 108
Query: 169 LY---IRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKL 225
L I + L Q+I QL + + + ++ +G + +SAS L++ R + +E +
Sbjct: 109 LENEEIEIIALDQVIEQLVTIPEVEERLSNSIEGNGHLLNSASSELRRIRASITRIESDV 168
Query: 226 YQLMDMLIRNENNESLFLEVSSIHG-RLCIRTGADQLS-FKGLLLS-SSSGIGSVIEPLS 282
M+ R N + L + +I R I + S F G++ SSSG +EP S
Sbjct: 169 RSRMEKFTRGNNVKYLSEPIVTIRNERYVIPARVEYRSKFGGVVHDQSSSGQTLYVEPES 228
Query: 283 AVPLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSF 342
V LN+EL+Q + + E+ +L L+ + D ++ + LD++NA+A Y+
Sbjct: 229 VVDLNNELRQNQVAEVHEEQRILQELSALVAPYTDTLKDNSRILGHLDLLNAKAQYAHQL 288
Query: 343 GGTSPNIFLPQDMKRSLTHEPVTSKVSSSEREWTIYLPKAYHPLLLQQHKQKTQQAWKDL 402
T P I S ++E I L +A HPL+ Q
Sbjct: 289 KATEPQI--------SASNE--------------INLREARHPLIDQ------------- 313
Query: 403 ESANTELRRRKLYGGNAARKGEKDTNLSPSEMQVSALELAHPVPIDIFIARKTRVLVITG 462
+K+ + GE +T LVITG
Sbjct: 314 ---------KKVVSNDIRLGGEYET------------------------------LVITG 334
Query: 463 PNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGH 522
PNTGGKTI LKTVGL +MA+SG+ I ++E + V F+ +FADIGDEQS+ Q+LSTFS H
Sbjct: 335 PNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADIGDEQSIEQNLSTFSSH 394
Query: 523 LKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELK 582
+ I+ +SL L DE+GAGT+P EG AL +++L+ +G+ +++ TTH+ ELK
Sbjct: 395 MDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRSTGA-VSMTTTHYPELK 453
Query: 583 TLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGA 642
T Y NA MEFD L+PTYK+L G+PG+S+A I++RLGL ++ AR L
Sbjct: 454 TYGYERMGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISKRLGLDSDIISQARGLVDQ 513
Query: 643 ASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
S ++N +I ++ + + + +A L + H+ L++
Sbjct: 514 DSQDLNNMIKDLTTRQKRAQKINQQAVELLKQAEEYHQTLVK 555
>sp|C0MAV6|MUTS2_STRE4 MutS2 protein OS=Streptococcus equi subsp. equi (strain 4047)
GN=mutS2 PE=3 SV=1
Length = 778
Score = 222 bits (566), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 229/401 (57%), Gaps = 45/401 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
+ +PV D+ A V+VITGPNTGGKTI LKT+GLA +MA+SGL IL+ + ++V F+
Sbjct: 307 IQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++ADIGDEQS+ QSLSTFS H+ I I++Q+ S SL+L DE+GAGT+P EG +L M++
Sbjct: 367 GIYADIGDEQSIEQSLSTFSSHMTHIVEILNQADSDSLILFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE + ++ T+ATTH+ ELK + ENA M FD V LKPTY+ + GVPGRS+A
Sbjct: 427 LEQLRLT-NIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQF---LEHVHEARHFLMLSRN 677
+IA RLGL +V+ A Q A ++N +I ++E+ + LEH+ E N
Sbjct: 486 DIARRLGLAEHIVKEA-QAMTATDHDVNRIIEQLEQQTLESRKRLEHIKEVEQ-----DN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRA 737
L N R +K+ + + ++++K AA AR +V + + SQ +H++A
Sbjct: 540 LKFN--RAVKKLYNEFSHAKDKELEK---AALEAREIVDIALAESDSILSQ----LHEKA 590
Query: 738 QQLRP-SASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 796
+ L+P ++ H K + L+ N V+K + K+
Sbjct: 591 E-LKPHEIIEAKHRLKQLAPEQSLSQN-----------------KVLK------KAKKWR 626
Query: 797 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMK 837
P VGD + V+++G++GT++ + + QVG +K +K
Sbjct: 627 APRVGDDIIVTAYGQRGTLL-AQLKDKRWEAQVGLIKLTLK 666
Score = 34.3 bits (77), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 22/302 (7%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGR-EATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSC 112
L LE++K+ + +T G+ E L + + Q L+E AAI ++ H
Sbjct: 6 LEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEM-AAIFVEHH--- 61
Query: 113 SLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIR 172
L G LS V +++ + + L E LAV LLQ S ++ A E+ DL
Sbjct: 62 HFALGG--LSDVSESMQRLDLEADLSIQELLAVKKLLQVSA--EVCRFYADLENVDL--- 114
Query: 173 FMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDML 232
+ L + ++ SL S +Q +++ G ++ ASP L+ R Q+ E QL+ +
Sbjct: 115 -VALKALFEKIESFPSLQGS-LQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDI 172
Query: 233 IRNEN---NESLFLEVSSIHGR--LCIRTGADQLSFKGLLLSSSSGIGSVIEPLSAVPLN 287
++ + +ESL ++S +GR L ++ + S+SG IEP + V LN
Sbjct: 173 LKKQAAYLSESL---IASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLN 229
Query: 288 DELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSP 347
+EL Q + +L L+E+++ + + LD+V A+ Y + T P
Sbjct: 230 EELTQLQTDERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQATVP 289
Query: 348 NI 349
I
Sbjct: 290 VI 291
>sp|B8I1Z8|MUTS2_CLOCE MutS2 protein OS=Clostridium cellulolyticum (strain ATCC 35319 /
DSM 5812 / JCM 6584 / H10) GN=mutS2 PE=3 SV=1
Length = 792
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 222/397 (55%), Gaps = 42/397 (10%)
Query: 445 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 504
VPID +I K L++TGPNTGGKT+ LKTVGL +M +SGL + +++ ++ F+ ++A
Sbjct: 317 VPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMMQSGLLVPANDGTEMSVFEKIYA 376
Query: 505 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 564
DIGDEQS+ QSLSTFS H+K I +I+S ++SL+LLDE+GAGT+P EG AL MS+LE
Sbjct: 377 DIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGTDPTEGAALAMSILECL 436
Query: 565 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 624
+ G+ T+ATTH+ ELK S ENA EFD L+PTY++L GVPG+S+A I++
Sbjct: 437 HQMGA-TTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISK 495
Query: 625 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
RLGL +++ +++ ++++ +E+ +++ + A + + L K+L
Sbjct: 496 RLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAESYRQEAERLKKDLED 555
Query: 685 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSL--------VHKR 736
+R++ A+Q+ +++K A AR ++ S +Q S+ + L V ++
Sbjct: 556 QKRRL----AAQKESELRK---AREEARRILTDSKRQADELVSEMKRLAKEQEEAEVRRQ 608
Query: 737 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 796
++LR ++S++ N + V+ + P K++K
Sbjct: 609 TEELRQKLNKSIN-------------NLDDSLVESI-MPRQGLVKPPKNLKP-------- 646
Query: 797 LPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMK 833
GD V + + +KGTV+ + E VQ G MK
Sbjct: 647 ----GDTVLIVNLNQKGTVLTLPDKNGEAQVQAGIMK 679
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 141/300 (47%), Gaps = 16/300 (5%)
Query: 55 RVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIE-MQKHGSCS 113
RVLE+DK+ + + LGRE L + Y+ ++L ETN + + + GS
Sbjct: 7 RVLEFDKILDKLKGLTASELGRELVLE--LTPQTDYRVVEKMLSETNDGVSCIMRRGSPP 64
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
L ++ ++ +++ + L P E L + +L+ + L+ + + E+ ++
Sbjct: 65 LG----GITDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLKGYINDKLDENNASVVK- 119
Query: 174 MPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLI 233
++I L N+ L + I + + I D+ASPAL R Q++ + + ++ +I
Sbjct: 120 ----ELISCLESNQRLEQKIDNCILSEDEIADNASPALSSIRRQIKEQQASIKDKLNSII 175
Query: 234 RNENNESLFLE-VSSIHG-RLCIRTGAD-QLSFKGLLL-SSSSGIGSVIEPLSAVPLNDE 289
R+ + E V ++ G R I + + GL+ SS+SG IEP++ V N+
Sbjct: 176 RSTKYQKYIQESVVTMRGDRYVIPVKQEHKGDIPGLVHDSSASGATLFIEPMAVVEANNS 235
Query: 290 LQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 349
++Q R + +L L++ + L ++ ++ + +LD + A++ ++ + P I
Sbjct: 236 IKQLRVKEQTEIDRILAELSQDASLVLPQLNANMSIMARLDFIFAKSKLAIDYNCICPKI 295
>sp|A3CKV4|MUTS2_STRSV MutS2 protein OS=Streptococcus sanguinis (strain SK36) GN=mutS2
PE=3 SV=1
Length = 777
Score = 221 bits (564), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 217/390 (55%), Gaps = 40/390 (10%)
Query: 433 EMQVSALELAHP-----VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLH 487
E + L + HP V D+ +VITGPNTGGKTI LKT+GLA +MA+SGL
Sbjct: 294 EQDIQLLSVRHPLIENAVANDLHFGLDLTEIVITGPNTGGKTIMLKTLGLAQIMAQSGLP 353
Query: 488 ILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAG 547
IL+ + ++V F +FADIGDEQS+ QSLSTFS H+ I +I+ Q S+SLVLLDE+GAG
Sbjct: 354 ILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVDSESLVLLDELGAG 413
Query: 548 TNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTY 607
T+P EG AL +++LE + T+ATTH+ ELK D+ ENA MEFD L+PTY
Sbjct: 414 TDPQEGAALAIAILEDL-RLRQIKTMATTHYPELKAYGIETDWVENASMEFDTDSLRPTY 472
Query: 608 KILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHE 667
+ + GVPGRS+A IA+RLGL ++V +A++ S ++N +I ER + Q L E
Sbjct: 473 RFMQGVPGRSNAFEIAQRLGLSEVIVGHAQEQTDTDS-DVNRII---ERLEEQTL----E 524
Query: 668 ARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSAS 727
+R L R + + L+ R + + K +++ A A+ +V L S S
Sbjct: 525 SRKRLDNIREVEQENLKFNRALKKLYNEFNREKETELNKARLEAQEIV-----DLALSES 579
Query: 728 QARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIK 787
+ S ++LH K ++ + Q + P T S K +K
Sbjct: 580 E--------------SILKNLHDKSSLKPHEIIEAKAQLKKL----APETVDLSKNKVLK 621
Query: 788 QSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
Q+ K+ P VGD + V+S+G++GT++K
Sbjct: 622 QA---KKNRAPKVGDDILVTSYGQRGTLVK 648
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 194 MQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNENNESLFLEVSSIHGRLC 253
+Q V++ G I+ AS +L + R ++Q E ++ +++ +++N+ V+S +GR
Sbjct: 134 LQAVNDGGFIESFASESLSRIRRKIQENENQVREILQEILKNKGEMLADQVVASRNGRNV 193
Query: 254 I---RTGADQLSFKGLLLS-SSSGIGSVIEPLSAVPLNDELQQARASVTKAEEDVLLALT 309
+ T +++S G++ S+SG IEP + V LN+E+ +RA + +L L+
Sbjct: 194 LPVKNTYRNRIS--GVVHDISASGNTVYIEPRAVVNLNEEIASSRADERYEIQRILQELS 251
Query: 310 EKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNIFLPQDMK 356
+ + EI I LD+V A+ + G P++ QD++
Sbjct: 252 DLFRPHAAEIANNAWIIGHLDLVRAKVRFMQETGAVVPDLSEEQDIQ 298
>sp|Q8RIK8|MUTS2_FUSNN MutS2 protein OS=Fusobacterium nucleatum subsp. nucleatum (strain
ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=mutS2
PE=3 SV=1
Length = 778
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 225/418 (53%), Gaps = 41/418 (9%)
Query: 432 SEMQVSALELA-HP-------VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAK 483
S ++ +LE A HP P+ I + +L+ITGPNTGGKT+ LKT GL +MA
Sbjct: 294 SNKEILSLEKARHPFIDKDKVTPLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMAL 353
Query: 484 SGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDE 543
SG+ I +SE +K+ +F+ VFADIGDEQS+ QSLS+FS HLK + I+ T SLVLLDE
Sbjct: 354 SGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSFSAHLKNVKEILEAVTKNSLVLLDE 413
Query: 544 IGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKL 603
+G+GT+P+EG A M++++ E + TTH+ ++K Y+ + E A MEF+ L
Sbjct: 414 LGSGTDPIEGAAFAMAVIDYLNEK-KCKSFITTHYSQVKAYGYNEEGIETASMEFNTDTL 472
Query: 604 KPTYKILWGVPGRSSAINIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLE 663
PTY++L G+PG S+A+ IA+R+GLP ++ AR+ + ++ E +IE + K+Q L+
Sbjct: 473 SPTYRLLVGIPGESNALTIAQRMGLPESIISKAREYISEDNKKV-EKMIENIKTKSQELD 531
Query: 664 HVHEARHFLMLSRNLHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLC 723
+ E L L + + I+E ++ I +S ++ + +
Sbjct: 532 EMRERFARLQEEARLDRERAKQETLIIEKQKNE-------------IIKSAYEEAEKMMN 578
Query: 724 PSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVV 783
++A +LV K ++ ++ KN ++L++ ++ VE VV
Sbjct: 579 EMRAKASALVEK----IQHEEKNKEDAKQIQKNLNMLSTALREEKNKTVE--------VV 626
Query: 784 KDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
K IK K VGD V V S + ++K+ SKE +VQ G +K + F +I
Sbjct: 627 KKIKTKVNFK------VGDRVFVKSINQFANILKINTSKESAMVQSGILKLEVPFDEI 678
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 172 RFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDM 231
++ L +MI + R + I + ++ + IKD AS L+ R + L + + +
Sbjct: 112 KYKQLREMIGNIPNLRVIEDVINKTINPEKEIKDDASLDLRDIRLHKKTLNMNIKRKFEE 171
Query: 232 LIRNENNESLFLE--VSSIHGRLCIRTGADQLSFKGLLLS-----SSSGIGSVIEPLSAV 284
L + + F E ++ GR+ D FKGL+ SSSG IEPLS V
Sbjct: 172 LFEEPSLSNAFQEKIITERDGRMVTPVKYD---FKGLIKGIEHDRSSSGQTVFIEPLSIV 228
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSL 340
LN+++++ + +LL + E ++ + D+I + ++ LD++NA++ Y++
Sbjct: 229 SLNNKMRELETKEKEEIRKILLRIAELLRNNKDDILIIGEKVMYLDILNAKSIYAV 284
>sp|A6TNX0|MUTS2_ALKMQ MutS2 protein OS=Alkaliphilus metalliredigens (strain QYMF)
GN=mutS2 PE=3 SV=1
Length = 789
Score = 221 bits (562), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 217/418 (51%), Gaps = 70/418 (16%)
Query: 445 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 504
VP +++I + LVITGPNTGGKT+ LKT+GL MMA+SGLH+ + ++ FD +FA
Sbjct: 317 VPTNLWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFA 376
Query: 505 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 564
DIGDEQS+ QSLSTFS H+ I NI+ + TS SLVL DE+GAGT+P EG ALGM++L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHL 436
Query: 565 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 624
E ++ T+ATTH+ ELK +N+ ENA +EFD L PTY++L GVPG+S+A I++
Sbjct: 437 REM-NVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISK 495
Query: 625 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
+LGLP +VQ A+ RF +Q + HF L +N+ KN
Sbjct: 496 KLGLPDGLVQRAK------------------RFLSQ------DTIHFEDLLQNIEKN--- 528
Query: 685 TRRKILEHCASQRFR-KVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPS 743
R +E ++R R + +K ++ + + L +R Q LR +
Sbjct: 529 RRESEIERQEAKRIRLEAEKFAEGY-----------------EDRKQRLEAQRDQILRDA 571
Query: 744 ASQSLHCTKVGK--NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPN-- 799
++ K K ++H++ + K E A + ++D K K +L +
Sbjct: 572 KKEAYRLVKEAKMDSEHIIKGLREM----KFELEAKEMNKKMEDAKNQLTGKMNDLSDHH 627
Query: 800 ----------------VGDLVHVSSFGKKGTVIKVEPSKEEIVVQVGNMKWIMKFTDI 841
GD V + S + G V+ K E+ VQ G MK M +++
Sbjct: 628 QQILNKKNKKPPKNLKPGDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISNL 685
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 20/303 (6%)
Query: 52 ESLRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAA--IEMQKH 109
+S+RVLE+ K+ + +++ +E +L I Q++ + +L ET+ A I +Q+
Sbjct: 4 KSIRVLEYGKMIDRLEERCLSAMAKEKA-RELRPI-QSFGEITQLQSETSEAQSILIQR- 60
Query: 110 GSCSLDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL 169
++ L G+ +K +R+ S L P E L V L+ + +L++ KE D
Sbjct: 61 --GNIPLGGI--HDIKQYLRKTEIGSYLDPKELLLVKDTLRTAR----NLKSFFKEGDD- 111
Query: 170 YIRFMPLTQMIMQLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
+ ++ +I L R++ I + D I D AS LK R Q+ + +
Sbjct: 112 QTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTEISDHASSTLKNIRRQISSKNDAVRNKL 171
Query: 230 DMLIRNENNESLFLEVSSI---HGRLCIRTGADQL-SFKGLLLS-SSSGIGSVIEPLSAV 284
+ +I N + +L+ + I R + + + GL+ SSSG +EP++ V
Sbjct: 172 NGII-NSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVPGLIHDQSSSGATLFVEPMAVV 230
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 344
LN+EL++ + E +L+ + E + E+ + +D V A+ SL G
Sbjct: 231 QLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKG 290
Query: 345 TSP 347
P
Sbjct: 291 VEP 293
>sp|Q8E3J5|MUTS2_STRA3 MutS2 protein OS=Streptococcus agalactiae serotype III (strain
NEM316) GN=mutS2 PE=3 SV=1
Length = 779
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 218/379 (57%), Gaps = 41/379 (10%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSR-NLH 679
IA RLGL +V+ A+Q+ + S ++N +I E+ + Q LE H + + NL
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRII---EQLEAQTLETRRRLDHIKEIEQENLK 541
Query: 680 KNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR--- 736
N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 542 FN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKLND 588
Query: 737 AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTE 796
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 589 KSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKAAR 629
Query: 797 LPNVGDLVHVSSFGKKGTV 815
P +GD + V+S+G++GT+
Sbjct: 630 APRIGDDIIVTSYGQRGTL 648
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E L + +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLVIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDML-- 173
Query: 235 NENNESLFLE--VSSIHGRLCI---RTGADQLSFKGLLLS-SSSGIGSVIEPLSAVPLND 288
+ L E ++S GR + T +++S G++ SSSG IEP + V LN+
Sbjct: 174 -KEKAELLSENLIASRSGRSVLPVKNTYRNRIS--GVVHDISSSGSTVYIEPRAVVTLNE 230
Query: 289 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 348
E+ Q RA E +L A ++ ++ + I + LD V A+ + T P
Sbjct: 231 EITQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPE 290
Query: 349 I 349
I
Sbjct: 291 I 291
>sp|Q8DXX6|MUTS2_STRA5 MutS2 protein OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=mutS2 PE=3 SV=1
Length = 779
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 677
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 736
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 737 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 794
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 795 TELPNVGDLVHVSSFGKKGTV 815
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 25/241 (10%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKE 175
Query: 235 NEN--NESLFLEVSSIHGRLCI---RTGADQLSFKGLLLS-SSSGIGSVIEPLSAVPLND 288
+E+L ++S GR + T +++S G++ SSSG IEP + V LN+
Sbjct: 176 KAELLSENL---IASRSGRSVLPVKNTYRNRIS--GVVHDISSSGSTVYIEPRAVVTLNE 230
Query: 289 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 348
E+ Q RA E +L A ++ ++ + I + LD V A+ + T P
Sbjct: 231 EITQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPE 290
Query: 349 I 349
I
Sbjct: 291 I 291
>sp|Q3JZH6|MUTS2_STRA1 MutS2 protein OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=mutS2 PE=3 SV=1
Length = 779
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 220/381 (57%), Gaps = 45/381 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L++PV D+ + +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDQDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKIAVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADHNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE S ++ T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-NIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 677
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 736
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 737 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 794
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 795 TELPNVGDLVHVSSFGKKGTV 815
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 25/241 (10%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADL-YIRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL + F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLDNVSFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDMLKE 175
Query: 235 NEN--NESLFLEVSSIHGRLCI---RTGADQLSFKGLLLS-SSSGIGSVIEPLSAVPLND 288
+E+L ++S GR + T +++S G++ SSSG IEP + V LN+
Sbjct: 176 KAELLSENL---IASRSGRSVLPVKNTYRNRIS--GVVHDISSSGSTVYIEPRAVVTLNE 230
Query: 289 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 348
E+ Q RA E +L A ++ ++ + I + LD V A+ + T P
Sbjct: 231 EITQLRADERHEESRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPE 290
Query: 349 I 349
I
Sbjct: 291 I 291
>sp|Q835H3|MUTS2_ENTFA MutS2 protein OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=mutS2 PE=3 SV=1
Length = 788
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 222/389 (57%), Gaps = 28/389 (7%)
Query: 445 VPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFA 504
V DI I + + +VITGPNTGGKTI LKT+GL +M ++GL I E +K+ F VFA
Sbjct: 317 VANDIVIGEEYQAIVITGPNTGGKTITLKTLGLLQLMGQAGLPIPVEEESKMGIFTEVFA 376
Query: 505 DIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAF 564
DIGDEQS+ QSLSTFS H+ I +++ + QSLVL DE+GAGT+P EG AL +++L++
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVSVLKKVDHQSLVLFDELGAGTDPQEGAALAIAILDSL 436
Query: 565 AESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAE 624
G+ + +ATTH+ ELK Y+ NA MEFD L PTY++L GVPGRS+A I++
Sbjct: 437 GAKGAYV-MATTHYPELKVYGYNRAGTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISK 495
Query: 625 RLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLR 684
RLGL +++ A+Q+ S ++NE+I ++E + EARH++ S LHK L
Sbjct: 496 RLGLDNSIIEAAKQIMDGESQDLNEMIEDLENRRKMAETEYLEARHYVDESAALHKELKE 555
Query: 685 TRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSA 744
+ E +R +++QK K A ++ A + + ++++ +
Sbjct: 556 AYQVFFE----EREKELQK-----------ARKEANKIIAEAEENAETIISDIRKMQLES 600
Query: 745 SQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLV 804
Q + G +H L +T + ++ H T + K+ K + K + GD V
Sbjct: 601 GQ-----QGGVKEHQLID--AKTQLSQLHHEET---KLAKN-KVLKKAKEQKKLKAGDEV 649
Query: 805 HVSSFGKKGTVIKVEPSKEEIVVQVGNMK 833
V+++G++GT++K + K + VQ+G +K
Sbjct: 650 IVNTYGQRGTLLK-DNGKGQWQVQLGILK 677
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 182 QLFVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLMDMLIRNENNESL 241
QL V L + + Q +D+DG + D ASPALK R ++ E+ + + +D +IR +N L
Sbjct: 125 QLEVLPELNRQLKQAIDDDGYVTDEASPALKAIRQNIRRSEQTIREELDSIIRGKNARYL 184
Query: 242 FLEVSSIHG-RLCIRTGADQLSFKGLLL--SSSSGIGSVIEPLSAVPLNDELQQARASVT 298
+ ++ R I + + G ++ S+SG IEP + +N+ L+Q + +
Sbjct: 185 SDALVTMRNERYVIPVKQEYKNIFGGVVHDQSASGQTLFIEPKQILEMNNRLRQQQIAER 244
Query: 299 KAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPNI 349
+L L+ ++ EI I +LD +NA+A P I
Sbjct: 245 NEITRILAELSAELVPYRREITHNAYVIGKLDFINAKARLGKELKAVVPEI 295
>sp|Q6GHU1|MUTS2_STAAR MutS2 protein OS=Staphylococcus aureus (strain MRSA252) GN=mutS2
PE=3 SV=1
Length = 782
Score = 220 bits (560), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 698 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 755
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 562 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 613
Query: 756 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 815
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 614 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 656
Query: 816 IKVEPSKEEIVVQVGNMKWIMKFTDI 841
+++ + EE +VQ+G +K + D+
Sbjct: 657 LEI-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|Q9ZEH5|MUTS2_STAAU MutS2 protein (Fragment) OS=Staphylococcus aureus GN=mutSB PE=3
SV=1
Length = 719
Score = 219 bits (559), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 218/386 (56%), Gaps = 38/386 (9%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 269 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 328
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 329 TFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 387
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 388 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 447
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 448 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 498
Query: 698 FRKVQK--ISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGK 755
F+ +K I DA K+ Q++ + +A ++ K +QLR + ++
Sbjct: 499 FQNYEKSLIEDAK-------EKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELID 550
Query: 756 NQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTV 815
+ L +++ K IKQ+ + ++ + GD V V S+G+KG V
Sbjct: 551 KKKRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEV 593
Query: 816 IKVEPSKEEIVVQVGNMKWIMKFTDI 841
+++ + EE +VQ+G +K + D+
Sbjct: 594 LEI-VNDEEAIVQMGIIKMKLPIEDL 618
>sp|Q8DSD1|MUTS2_STRMU MutS2 protein OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=mutS2 PE=3 SV=1
Length = 776
Score = 219 bits (558), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 173/297 (58%), Gaps = 22/297 (7%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L++P+ D+ T ++ITGPNTGGKTI LKT+G+ +MA+SGL IL+ E +KV F
Sbjct: 307 LSNPIANDLHFEHDTTAILITGPNTGGKTIMLKTLGITQLMAQSGLPILADEGSKVAVFK 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
+FADIGDEQS+ QSLSTFS H+ I I+ ++ SLVL DE+GAGT+P EG AL MS+
Sbjct: 367 DIFADIGDEQSIEQSLSTFSSHMTHIVEILQKANKDSLVLFDELGAGTDPQEGAALAMSI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE S + T+ TTH+ ELK +F ENA MEFD V L PTY + GVPGRS+A
Sbjct: 427 LEHLRLS-DIKTMITTHYPELKAYGIETEFIENASMEFDMVTLSPTYHFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHK 680
IA RLGL I+V A L S ++N++I ER + Q + E+R L R + +
Sbjct: 486 EIARRLGLSEIIVAEAENLTNTDS-DVNKII---ERLENQTI----ESRRRLDNIREVEQ 537
Query: 681 NLLRTRRKI------LEHCASQRFR----KVQKISDAAAIARSLVHKSAQ---QLCP 724
L+ R + H + R K Q+I D A + K+ Q QL P
Sbjct: 538 ENLKFNRAVKKLYNEFSHAQDKELRKAKLKAQEIVDKALAESDFILKNLQDKAQLKP 594
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 138/322 (42%), Gaps = 28/322 (8%)
Query: 54 LRVLEWDKLCHSVSSFARTSLGREATLTQLWSINQTYQDSLRLLDETNAAIEMQKHGSCS 113
L+ LE+DK+ + F ++ G + L L + + + + A Q++ S
Sbjct: 6 LKALEFDKVKKQFTHFLQSEQG-QMELNDLLPMTNQEKIERSFAEIADVAQIFQEYASFG 64
Query: 114 LDLTGVDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLYIRF 173
+ D+S ++R + + L E LAV +LQ S L+ D Y
Sbjct: 65 FGHSQ-DIS---ESLRRLELGADLNTQELLAVKRILQMSAELK-----------DFYDNL 109
Query: 174 MPLTQMIMQLFVNR----SLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM 229
+ I+ + ++ +Q +++ G I+D ASP L + R + E+++ Q++
Sbjct: 110 ENVDLQILDCLFEKIETFPDLQGSLQAINDGGFIEDFASPELTKIRHHIHQNEQQIRQIL 169
Query: 230 DMLIRNENN---ESLFLEVSSIHGRLCIRT-GADQLSFKGLLLS-SSSGIGSVIEPLSAV 284
+++ + + E+L ++S GR + + G++ S+SG IEP + V
Sbjct: 170 QEMLKKQGDLLAENL---IASRSGRSVLPVKNTYRHRIAGVIHDISASGNTVYIEPRAVV 226
Query: 285 PLNDELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGG 344
LN+E+ QARA +L L+++++ D I + +D V + Y
Sbjct: 227 NLNEEMTQARADERHEMTRILHDLSDRLRSQTDIIGNNAWLLGHIDFVRGKYLYMRENQA 286
Query: 345 TSPNIFLPQDMKRSLTHEPVTS 366
+ P++ Q ++ P+ S
Sbjct: 287 SLPSLTTDQTIRLLSVRHPLLS 308
>sp|B5XI46|MUTS2_STRPZ MutS2 protein OS=Streptococcus pyogenes serotype M49 (strain NZ131)
GN=mutS2 PE=3 SV=1
Length = 779
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 218/381 (57%), Gaps = 45/381 (11%)
Query: 441 LAHPVPIDIFIARKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFD 500
L++PV D+ +VITGPNTGGKTI LKT+GLA +M +SGL +L+ + +K+ F+
Sbjct: 307 LSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQSGLPVLADKGSKITVFN 366
Query: 501 SVFADIGDEQSLSQSLSTFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSL 560
++FADIGDEQS+ QSLSTFS H+ I +I++++ SLVL DE+GAGT+P EG +L M++
Sbjct: 367 NIFADIGDEQSIEQSLSTFSSHMTHIVSILNEADRNSLVLFDELGAGTDPQEGASLAMAI 426
Query: 561 LEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAI 620
LE S + T+ATTH+ ELK +F ENA MEFD L PTY+ + GVPGRS+A
Sbjct: 427 LEHLRLS-HIKTMATTHYPELKAYGIETNFVENASMEFDAETLSPTYRFMQGVPGRSNAF 485
Query: 621 NIAERLGLPGIVVQNARQLYGAASAEINEVI--IEMERFKTQF-LEHVHEARHFLMLSRN 677
IA RLGL +V+ A+Q+ + S ++N +I +E + +T+ L+H+ E N
Sbjct: 486 EIASRLGLAPFIVKQAKQMTDSDS-DVNRIIEQLEAQTLETRRRLDHIKEVEQ-----EN 539
Query: 678 LHKNLLRTRRKILEHCASQRFRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKR- 736
L N R +K+ + +R ++++KI ++ AQ++ A + K+
Sbjct: 540 LKFN--RAVKKLYNEFSHERDKELEKI-----------YQEAQEIVDMALNESDTILKKL 586
Query: 737 --AQQLRPSASQSLHCTKVGKNQHVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKR 794
QL+P H K Q + K+ S + V + ++ ++K
Sbjct: 587 NDKSQLKP------HEIIDAKAQ-----------IKKLAPQVDLSKNKV--LNKAKKIKA 627
Query: 795 TELPNVGDLVHVSSFGKKGTV 815
P +GD + V+S+G++GT+
Sbjct: 628 ARAPRIGDDIIVTSYGQRGTL 648
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 25/241 (10%)
Query: 119 VDLSLVKSAIREVRRASPLRPNEALAVVALLQFSETLQLSLRAAIKEDADLY-IRFMPLT 177
V LS + +++ + ++ L E LA+ +LQ S + I +DL I F L
Sbjct: 66 VSLSSISESLKRLELSADLNIQELLAIKKVLQSSSDM-------IHFYSDLNNISFQSLD 118
Query: 178 QMIMQL--FVNRSLIKSIMQVVDEDGSIKDSASPALKQSRGQVQMLERKLYQLM-DMLIR 234
++ L F N ++ Q +++ G ++ ASP L++ R Q+ ER++ Q++ DML
Sbjct: 119 RLFENLEQFPN---LQGSFQAINDGGFLEHFASPELERIRRQLTNSERRVRQILQDML-- 173
Query: 235 NENNESLFLE--VSSIHGRLCI---RTGADQLSFKGLLLS-SSSGIGSVIEPLSAVPLND 288
+ L E ++S GR + T +++S G++ SSSG IEP + V LN+
Sbjct: 174 -KEKAELLSENLIASRSGRSVLPVKNTYRNRIS--GVVHDISSSGTTVYIEPRAVVTLNE 230
Query: 289 ELQQARASVTKAEEDVLLALTEKMQVDLDEIEKMLNGIIQLDVVNARATYSLSFGGTSPN 348
E+ Q RA E +L A ++ ++ + I + LD V A+ + T P
Sbjct: 231 EITQLRADERHEEGRILHAFSDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPK 290
Query: 349 I 349
I
Sbjct: 291 I 291
>sp|P65496|MUTS2_STAAN MutS2 protein OS=Staphylococcus aureus (strain N315) GN=mutS2 PE=1
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 818 VEPSKEEIVVQVGNMKWIMKFTDI 841
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|P65495|MUTS2_STAAM MutS2 protein OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=mutS2 PE=1 SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 818 VEPSKEEIVVQVGNMKWIMKFTDI 841
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|A5IS30|MUTS2_STAA9 MutS2 protein OS=Staphylococcus aureus (strain JH9) GN=mutS2 PE=3
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 818 VEPSKEEIVVQVGNMKWIMKFTDI 841
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
>sp|A6U0W1|MUTS2_STAA2 MutS2 protein OS=Staphylococcus aureus (strain JH1) GN=mutS2 PE=3
SV=1
Length = 782
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 217/384 (56%), Gaps = 34/384 (8%)
Query: 458 LVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSVFADIGDEQSLSQSLS 517
++ITGPNTGGKT+ LKT+GL ++MA+SGL I + + +++ F +V+ DIGDEQS+ QSLS
Sbjct: 332 VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLS 391
Query: 518 TFSGHLKQIGNIISQSTSQSLVLLDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTH 577
TFS H+ I I+ + SLVL DE+GAGT+P EG AL MS+L+ + GSL+ +ATTH
Sbjct: 392 TFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLV-MATTH 450
Query: 578 HGELKTLKYSNDFFENACMEFDEVKLKPTYKILWGVPGRSSAINIAERLGLPGIVVQNAR 637
+ ELK Y+ + NA +EFD L PTYK+L GVPGRS+A +I+++LGL ++ A+
Sbjct: 451 YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAK 510
Query: 638 QLYGAASAEINEVIIEMERFKTQFLEHVHEARHFLMLSRNLHKNLLRTRRKILEHCASQR 697
+ G EINE+I +ER + E + + +H +L + Q+
Sbjct: 511 TMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSK---------QYQQ 561
Query: 698 FRKVQKISDAAAIARSLVHKSAQQLCPSASQARSLVHKRAQQLRPSASQSLHCTKVGKNQ 757
F+ +K ++ K+ Q++ + +A ++ K +QLR + ++ +
Sbjct: 562 FQNYEK-----SLIEEAKEKANQKIKAATKEADDII-KDLRQLREQKGADVKEHELIDKK 615
Query: 758 HVLTSNFQQTTVDKVEHPATASSSVVKDIKQSPRVKRTELPNVGDLVHVSSFGKKGTVIK 817
L +++ K IKQ+ + ++ + GD V V S+G+KG V++
Sbjct: 616 KRLDDHYE-----------------AKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLE 658
Query: 818 VEPSKEEIVVQVGNMKWIMKFTDI 841
+ + EE +VQ+G +K + D+
Sbjct: 659 I-VNDEEAIVQMGIIKMKLPIEDL 681
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,446,359
Number of Sequences: 539616
Number of extensions: 10927308
Number of successful extensions: 40176
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 37522
Number of HSP's gapped (non-prelim): 1343
length of query: 844
length of database: 191,569,459
effective HSP length: 126
effective length of query: 718
effective length of database: 123,577,843
effective search space: 88728891274
effective search space used: 88728891274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)