Query 003145
Match_columns 844
No_of_seqs 487 out of 3102
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 17:53:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003145.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003145hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03064 alpha,alpha-trehalose 100.0 2E-169 5E-174 1507.6 88.9 803 1-806 1-808 (934)
2 PLN02205 alpha,alpha-trehalose 100.0 1E-153 2E-158 1382.9 81.2 727 93-842 59-849 (854)
3 PLN03063 alpha,alpha-trehalose 100.0 7E-152 2E-156 1369.2 84.9 748 87-843 5-789 (797)
4 PRK14501 putative bifunctional 100.0 6E-141 1E-145 1277.5 81.5 714 94-839 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 9E-118 2E-122 1039.3 60.3 707 93-835 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 9E-116 2E-120 982.5 49.7 450 94-564 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 4E-114 8E-119 980.6 50.7 454 99-561 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 2E-114 5E-119 984.8 38.6 462 95-561 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 6E-110 1E-114 929.4 48.6 464 89-562 10-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 3E-105 7E-110 913.2 52.1 452 95-560 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 5.6E-96 1E-100 843.0 51.5 456 95-559 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 1.7E-35 3.6E-40 356.2 49.7 530 232-812 311-1000(1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 3.6E-35 7.8E-40 308.4 23.6 244 576-840 3-254 (266)
14 PLN02580 trehalose-phosphatase 100.0 1.2E-33 2.6E-38 310.8 26.2 235 583-839 111-378 (384)
15 PF02358 Trehalose_PPase: Treh 100.0 6.4E-35 1.4E-39 307.7 12.9 219 595-828 1-235 (235)
16 PLN02151 trehalose-phosphatase 100.0 2.5E-32 5.4E-37 297.0 24.9 232 587-839 94-346 (354)
17 PLN03017 trehalose-phosphatase 100.0 2.7E-32 5.8E-37 297.5 24.1 236 584-840 104-361 (366)
18 PRK10187 trehalose-6-phosphate 100.0 4.2E-32 9.1E-37 290.8 25.1 224 591-839 14-245 (266)
19 TIGR00685 T6PP trehalose-phosp 100.0 4.1E-32 9E-37 287.8 24.7 227 589-838 1-243 (244)
20 cd03792 GT1_Trehalose_phosphor 99.9 1.1E-25 2.3E-30 253.3 26.8 300 210-561 65-371 (372)
21 PLN02939 transferase, transfer 99.9 9.8E-25 2.1E-29 259.8 34.4 321 211-563 590-968 (977)
22 PRK15484 lipopolysaccharide 1, 99.9 1.3E-24 2.9E-29 245.4 33.5 273 230-562 98-378 (380)
23 PRK00654 glgA glycogen synthas 99.9 9.1E-25 2E-29 253.2 31.6 310 217-562 104-463 (466)
24 PLN02316 synthase/transferase 99.9 2.4E-24 5.2E-29 261.0 34.7 311 210-563 688-1035(1036)
25 TIGR02472 sucr_P_syn_N sucrose 99.9 9.9E-25 2.1E-29 251.1 29.4 312 215-559 98-438 (439)
26 PRK14098 glycogen synthase; Pr 99.9 2.2E-24 4.7E-29 250.6 30.7 323 207-562 117-486 (489)
27 TIGR02095 glgA glycogen/starch 99.9 2.3E-24 4.9E-29 250.6 30.1 312 214-561 111-472 (473)
28 PRK15427 colanic acid biosynth 99.9 9.9E-24 2.1E-28 240.2 31.3 277 231-561 118-405 (406)
29 TIGR03449 mycothiol_MshA UDP-N 99.9 3.4E-23 7.4E-28 235.3 33.8 289 231-562 101-402 (405)
30 PRK14099 glycogen synthase; Pr 99.9 2.3E-23 5E-28 241.7 32.7 297 231-563 133-480 (485)
31 cd03818 GT1_ExpC_like This fam 99.9 1.7E-23 3.8E-28 237.5 27.7 284 231-556 87-395 (396)
32 TIGR02470 sucr_synth sucrose s 99.9 1.5E-22 3.3E-27 240.5 34.6 331 211-559 364-745 (784)
33 cd03791 GT1_Glycogen_synthase_ 99.9 8.7E-23 1.9E-27 237.3 30.9 314 211-560 109-475 (476)
34 PLN00142 sucrose synthase 99.9 2.2E-22 4.7E-27 239.2 31.5 331 211-559 387-768 (815)
35 PLN02871 UDP-sulfoquinovose:DA 99.9 2E-22 4.4E-27 233.7 30.2 279 231-564 144-437 (465)
36 cd03796 GT1_PIG-A_like This fa 99.9 5.7E-22 1.2E-26 225.3 31.5 278 231-563 88-369 (398)
37 TIGR02149 glgA_Coryne glycogen 99.9 8E-22 1.7E-26 222.3 31.0 287 231-562 83-387 (388)
38 cd03800 GT1_Sucrose_synthase T 99.9 1.2E-21 2.6E-26 220.7 31.5 295 223-556 93-397 (398)
39 COG0561 Cof Predicted hydrolas 99.9 4.4E-23 9.5E-28 221.4 18.8 201 590-819 2-237 (264)
40 cd03813 GT1_like_3 This family 99.9 3.7E-22 8.1E-27 232.0 28.1 283 225-558 167-473 (475)
41 PLN02949 transferase, transfer 99.9 1.8E-21 3.8E-26 224.1 32.1 316 180-563 108-458 (463)
42 TIGR03088 stp2 sugar transfera 99.9 1.9E-21 4.2E-26 218.5 31.1 231 288-561 137-372 (374)
43 cd03806 GT1_ALG11_like This fa 99.9 8.4E-22 1.8E-26 225.4 28.4 274 232-551 108-416 (419)
44 PRK15126 thiamin pyrimidine py 99.9 1.4E-22 3.1E-27 218.4 19.7 217 591-838 2-262 (272)
45 TIGR01484 HAD-SF-IIB HAD-super 99.9 8.6E-23 1.9E-27 210.5 16.5 194 593-812 1-204 (204)
46 cd05844 GT1_like_7 Glycosyltra 99.9 3.5E-21 7.5E-26 214.9 29.6 275 225-556 77-365 (367)
47 cd04951 GT1_WbdM_like This fam 99.9 6.7E-21 1.4E-25 211.2 29.8 281 226-560 75-359 (360)
48 PRK15490 Vi polysaccharide bio 99.9 7.6E-21 1.7E-25 217.0 30.6 289 231-561 280-575 (578)
49 PRK10976 putative hydrolase; P 99.9 3.9E-22 8.4E-27 214.3 18.9 219 591-838 2-264 (266)
50 cd03805 GT1_ALG2_like This fam 99.9 1E-20 2.2E-25 213.7 30.6 283 230-554 93-391 (392)
51 PRK10513 sugar phosphate phosp 99.9 1E-21 2.2E-26 211.4 20.4 217 590-837 2-267 (270)
52 cd04962 GT1_like_5 This family 99.9 3E-20 6.5E-25 207.7 32.4 277 231-561 84-370 (371)
53 PRK15179 Vi polysaccharide bio 99.9 1.1E-20 2.4E-25 225.0 28.4 280 231-559 400-691 (694)
54 PRK10307 putative glycosyl tra 99.9 2.2E-20 4.8E-25 213.2 29.8 285 230-563 105-409 (412)
55 PRK01158 phosphoglycolate phos 99.9 2.3E-21 4.9E-26 203.6 20.0 188 591-819 3-205 (230)
56 TIGR02918 accessory Sec system 99.9 3.4E-20 7.3E-25 215.5 31.6 275 229-561 209-499 (500)
57 cd03819 GT1_WavL_like This fam 99.9 2.7E-20 5.8E-25 206.4 28.5 265 231-545 78-348 (355)
58 PRK03669 mannosyl-3-phosphogly 99.9 5.7E-21 1.2E-25 205.9 21.0 213 590-839 6-269 (271)
59 cd03812 GT1_CapH_like This fam 99.9 3.5E-20 7.7E-25 205.7 26.5 253 231-533 80-337 (358)
60 cd04946 GT1_AmsK_like This fam 99.9 1.3E-19 2.9E-24 206.6 31.4 272 231-556 127-406 (407)
61 cd03809 GT1_mtfB_like This fam 99.9 2.1E-20 4.5E-25 206.7 24.1 276 230-556 84-364 (365)
62 PF08282 Hydrolase_3: haloacid 99.9 5.1E-21 1.1E-25 201.9 18.0 193 594-821 1-236 (254)
63 cd03821 GT1_Bme6_like This fam 99.9 8.8E-20 1.9E-24 201.1 28.6 278 229-556 85-374 (375)
64 cd03793 GT1_Glycogen_synthase_ 99.9 1.2E-19 2.6E-24 207.4 30.0 308 230-562 147-587 (590)
65 PRK10125 putative glycosyl tra 99.9 6.3E-20 1.4E-24 208.7 27.2 188 326-561 212-404 (405)
66 PLN02887 hydrolase family prot 99.9 1.4E-20 3E-25 219.3 22.0 224 582-837 300-578 (580)
67 cd03822 GT1_ecORF704_like This 99.9 8.7E-20 1.9E-24 201.8 27.1 280 231-559 76-365 (366)
68 cd04949 GT1_gtfA_like This fam 99.9 8.2E-20 1.8E-24 205.0 26.4 268 229-554 97-371 (372)
69 TIGR01482 SPP-subfamily Sucros 99.8 1.5E-20 3.2E-25 196.7 17.4 188 594-819 1-197 (225)
70 cd03799 GT1_amsK_like This is 99.8 3.2E-19 7E-24 197.3 28.8 267 231-554 79-354 (355)
71 cd03807 GT1_WbnK_like This fam 99.8 3.4E-19 7.4E-24 195.6 28.7 279 231-559 80-364 (365)
72 PLN02846 digalactosyldiacylgly 99.8 9.8E-20 2.1E-24 207.3 24.2 186 331-562 201-392 (462)
73 PHA01633 putative glycosyl tra 99.8 3.2E-19 6.9E-24 195.8 27.1 191 331-556 118-334 (335)
74 TIGR01485 SPP_plant-cyano sucr 99.8 1.8E-20 4E-25 199.4 16.5 222 591-841 1-247 (249)
75 cd03817 GT1_UGDG_like This fam 99.8 4.2E-19 9.1E-24 195.9 27.6 272 231-558 84-370 (374)
76 cd03801 GT1_YqgM_like This fam 99.8 6E-19 1.3E-23 192.7 28.5 279 231-559 85-373 (374)
77 cd03794 GT1_wbuB_like This fam 99.8 7.8E-19 1.7E-23 194.3 29.4 280 229-556 97-394 (394)
78 PRK09922 UDP-D-galactose:(gluc 99.8 3.5E-19 7.5E-24 199.7 26.7 264 231-561 84-355 (359)
79 PRK10530 pyridoxal phosphate ( 99.8 7.4E-20 1.6E-24 197.0 20.3 217 590-837 2-270 (272)
80 cd03798 GT1_wlbH_like This fam 99.8 7E-19 1.5E-23 193.1 28.2 282 230-561 92-376 (377)
81 cd03814 GT1_like_2 This family 99.8 3.3E-19 7.2E-24 196.7 25.6 272 231-559 83-363 (364)
82 cd03820 GT1_amsD_like This fam 99.8 7.8E-19 1.7E-23 191.1 25.5 262 231-556 83-347 (348)
83 TIGR03087 stp1 sugar transfera 99.8 1.5E-18 3.2E-23 197.3 28.0 279 219-560 90-395 (397)
84 PLN02501 digalactosyldiacylgly 99.8 1.5E-18 3.3E-23 199.9 27.6 264 231-559 434-707 (794)
85 cd03823 GT1_ExpE7_like This fa 99.8 3.3E-18 7.1E-23 188.2 29.4 259 231-559 96-357 (359)
86 PHA01630 putative group 1 glyc 99.8 1.3E-18 2.8E-23 192.5 26.0 214 287-561 94-330 (331)
87 TIGR00099 Cof-subfamily Cof su 99.8 1.6E-19 3.4E-24 193.0 18.1 198 593-819 1-236 (256)
88 TIGR01487 SPP-like sucrose-pho 99.8 2.3E-19 5E-24 186.6 17.7 191 591-821 1-197 (215)
89 cd03808 GT1_cap1E_like This fa 99.8 5.9E-18 1.3E-22 185.0 27.3 273 231-556 80-358 (359)
90 cd03802 GT1_AviGT4_like This f 99.8 4.9E-18 1.1E-22 186.7 26.5 243 231-558 87-333 (335)
91 PTZ00174 phosphomannomutase; P 99.8 1.1E-18 2.3E-23 185.7 20.4 205 589-819 3-237 (247)
92 TIGR02471 sucr_syn_bact_C sucr 99.8 5.1E-19 1.1E-23 186.8 17.8 194 593-822 1-210 (236)
93 cd03795 GT1_like_4 This family 99.8 8.3E-18 1.8E-22 186.2 27.7 266 230-549 82-354 (357)
94 TIGR01486 HAD-SF-IIB-MPGP mann 99.8 1.4E-18 3.1E-23 185.7 20.5 186 593-817 1-224 (256)
95 cd03816 GT1_ALG1_like This fam 99.8 6E-18 1.3E-22 193.5 27.0 270 230-544 94-400 (415)
96 cd04955 GT1_like_6 This family 99.8 1.6E-17 3.6E-22 184.5 26.3 268 231-559 84-362 (363)
97 cd03804 GT1_wbaZ_like This fam 99.8 1.2E-17 2.6E-22 186.1 25.1 249 230-555 82-350 (351)
98 PRK00192 mannosyl-3-phosphogly 99.8 3.6E-18 7.9E-23 184.3 19.0 192 591-820 4-240 (273)
99 PLN02382 probable sucrose-phos 99.8 1.6E-18 3.4E-23 196.5 15.4 206 587-822 5-230 (413)
100 TIGR02463 MPGP_rel mannosyl-3- 99.8 3.6E-18 7.8E-23 178.4 15.7 186 593-812 1-220 (221)
101 cd03825 GT1_wcfI_like This fam 99.8 6.1E-17 1.3E-21 179.8 26.1 196 326-561 159-364 (365)
102 cd03811 GT1_WabH_like This fam 99.8 4.7E-17 1E-21 177.2 24.3 246 231-527 81-332 (353)
103 PLN02423 phosphomannomutase 99.8 4.8E-17 1E-21 172.5 21.8 210 591-838 7-244 (245)
104 PLN02275 transferase, transfer 99.8 1.7E-16 3.6E-21 178.9 26.2 241 230-525 99-371 (371)
105 COG0297 GlgA Glycogen synthase 99.7 4.6E-16 1E-20 177.5 27.2 300 231-563 130-479 (487)
106 PRK14502 bifunctional mannosyl 99.7 9E-17 2E-21 186.5 19.5 194 589-819 414-663 (694)
107 PF05116 S6PP: Sucrose-6F-phos 99.7 1.8E-17 4E-22 175.9 11.0 218 591-841 2-246 (247)
108 PRK05749 3-deoxy-D-manno-octul 99.7 2.8E-15 6.1E-20 172.0 27.2 285 223-560 117-418 (425)
109 PF00534 Glycos_transf_1: Glyc 99.7 2.6E-16 5.7E-21 156.9 15.0 156 361-541 13-171 (172)
110 TIGR02461 osmo_MPG_phos mannos 99.7 3.2E-16 6.9E-21 164.2 13.0 187 593-813 1-225 (225)
111 PRK12702 mannosyl-3-phosphogly 99.6 4.9E-15 1.1E-19 156.7 18.2 191 591-815 1-254 (302)
112 KOG1111 N-acetylglucosaminyltr 99.6 2E-14 4.3E-19 152.5 16.8 202 324-565 167-370 (426)
113 cd04950 GT1_like_1 Glycosyltra 99.6 2E-13 4.3E-18 154.1 25.1 264 231-561 102-371 (373)
114 PLN02605 monogalactosyldiacylg 99.5 2.7E-12 6E-17 145.3 26.1 194 326-558 173-378 (382)
115 KOG0853 Glycosyltransferase [C 99.5 2.3E-12 4.9E-17 145.4 21.4 220 328-560 236-466 (495)
116 KOG1387 Glycosyltransferase [C 99.4 1.2E-10 2.5E-15 123.2 26.1 310 211-562 126-459 (465)
117 COG0438 RfaG Glycosyltransfera 99.4 2.9E-11 6.3E-16 130.3 21.9 199 327-562 173-377 (381)
118 PRK13609 diacylglycerol glucos 99.4 2.2E-10 4.8E-15 129.5 27.7 270 222-564 96-374 (380)
119 PRK00726 murG undecaprenyldiph 99.3 1.2E-10 2.6E-15 130.5 21.4 252 231-560 91-356 (357)
120 cd03785 GT1_MurG MurG is an N- 99.3 2.3E-10 5E-15 127.4 22.4 247 225-550 84-346 (350)
121 cd01635 Glycosyltransferase_GT 99.3 7.2E-11 1.6E-15 121.2 17.0 118 368-509 109-229 (229)
122 TIGR01133 murG undecaprenyldip 99.2 6.2E-10 1.3E-14 123.8 21.0 181 329-553 153-346 (348)
123 TIGR00236 wecB UDP-N-acetylglu 99.2 1.4E-09 3.1E-14 122.3 23.9 248 232-535 87-341 (365)
124 PRK13608 diacylglycerol glucos 99.2 2.3E-09 4.9E-14 122.0 25.3 260 231-563 104-373 (391)
125 TIGR02094 more_P_ylases alpha- 99.2 9.5E-09 2.1E-13 121.7 29.8 182 362-558 388-597 (601)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.2 4.3E-09 9.3E-14 117.9 23.5 242 231-529 88-339 (363)
127 COG3769 Predicted hydrolase (H 99.1 9.2E-10 2E-14 109.9 13.9 200 590-821 6-243 (274)
128 TIGR03713 acc_sec_asp1 accesso 99.1 1.6E-08 3.5E-13 118.2 24.3 274 214-548 203-508 (519)
129 PRK09814 beta-1,6-galactofuran 99.1 2.8E-08 6.1E-13 110.5 24.1 241 225-546 58-316 (333)
130 PF13692 Glyco_trans_1_4: Glyc 99.0 9.9E-10 2.1E-14 104.9 10.0 129 363-526 2-134 (135)
131 PRK00025 lpxB lipid-A-disaccha 99.0 4.9E-08 1.1E-12 110.2 23.4 150 356-539 176-352 (380)
132 KOG3189 Phosphomannomutase [Li 98.9 1.7E-08 3.7E-13 99.3 14.6 202 586-814 6-238 (252)
133 PF05693 Glycogen_syn: Glycoge 98.9 1.8E-07 3.9E-12 107.6 24.9 322 219-563 129-583 (633)
134 cd04299 GT1_Glycogen_Phosphory 98.9 3.2E-07 6.9E-12 110.8 25.8 182 364-560 479-688 (778)
135 PF03332 PMM: Eukaryotic phosp 98.8 3.4E-08 7.3E-13 100.5 11.5 190 627-837 1-218 (220)
136 PF13524 Glyco_trans_1_2: Glyc 98.5 6.8E-07 1.5E-11 79.8 10.1 88 462-556 1-91 (92)
137 TIGR00215 lpxB lipid-A-disacch 98.5 1.8E-05 4E-10 89.8 23.0 135 362-528 190-348 (385)
138 PRK09484 3-deoxy-D-manno-octul 98.3 1E-06 2.2E-11 89.5 7.8 59 769-834 97-168 (183)
139 cd01427 HAD_like Haloacid deha 98.3 1.3E-06 2.9E-11 82.3 7.4 63 593-662 1-63 (139)
140 TIGR01670 YrbI-phosphatas 3-de 98.3 2.1E-06 4.5E-11 84.7 8.5 66 768-840 76-151 (154)
141 TIGR02919 accessory Sec system 98.3 0.00012 2.5E-09 84.2 23.3 121 379-529 291-413 (438)
142 PRK11133 serB phosphoserine ph 98.2 3.7E-07 8.1E-12 100.5 1.2 64 766-838 246-316 (322)
143 smart00775 LNS2 LNS2 domain. T 98.2 3.1E-06 6.6E-11 83.8 6.4 77 593-673 1-88 (157)
144 COG1519 KdtA 3-deoxy-D-manno-o 98.0 0.003 6.4E-08 70.6 26.9 221 277-546 166-404 (419)
145 TIGR01689 EcbF-BcbF capsule bi 98.0 1.2E-05 2.7E-10 76.0 6.3 54 592-654 2-55 (126)
146 TIGR02726 phenyl_P_delta pheny 98.0 1.8E-05 3.9E-10 79.1 7.5 47 768-821 82-132 (169)
147 TIGR01684 viral_ppase viral ph 97.8 4.6E-05 1E-09 81.5 7.3 73 589-674 124-201 (301)
148 PHA03398 viral phosphatase sup 97.4 0.00027 5.8E-09 75.8 7.1 71 590-673 127-202 (303)
149 COG0560 SerB Phosphoserine pho 97.4 0.00097 2.1E-08 69.3 10.6 61 760-827 136-202 (212)
150 TIGR00338 serB phosphoserine p 97.2 0.0032 7E-08 65.4 11.8 51 768-825 152-208 (219)
151 TIGR01662 HAD-SF-IIIA HAD-supe 96.9 0.001 2.3E-08 63.4 4.7 65 592-663 1-73 (132)
152 KOG2941 Beta-1,4-mannosyltrans 96.8 0.13 2.7E-06 56.1 19.1 138 362-526 254-404 (444)
153 TIGR01681 HAD-SF-IIIC HAD-supe 96.7 0.0024 5.2E-08 60.9 5.5 65 592-659 1-66 (128)
154 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.7 0.002 4.4E-08 68.7 5.4 65 592-672 2-74 (249)
155 PRK10444 UMP phosphatase; Prov 96.7 0.0015 3.3E-08 69.6 4.0 54 591-660 1-54 (248)
156 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.6 0.0015 3.2E-08 70.2 3.8 56 592-659 2-57 (257)
157 PRK13225 phosphoglycolate phos 96.6 0.041 8.9E-07 59.6 14.5 64 768-838 196-271 (273)
158 TIGR01672 AphA HAD superfamily 96.5 0.0071 1.5E-07 63.9 7.4 84 577-662 49-157 (237)
159 PLN02645 phosphoglycolate phos 96.4 0.0025 5.4E-08 70.4 3.9 55 590-660 27-81 (311)
160 TIGR01452 PGP_euk phosphoglyco 96.4 0.0029 6.2E-08 68.7 4.0 52 591-658 2-53 (279)
161 PRK13226 phosphoglycolate phos 96.1 0.024 5.2E-07 59.6 9.4 61 769-836 153-226 (229)
162 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.0093 2E-07 59.6 5.3 69 590-662 12-93 (166)
163 COG1778 Low specificity phosph 96.0 0.011 2.5E-07 57.1 5.5 70 588-662 5-74 (170)
164 PF02684 LpxB: Lipid-A-disacch 95.9 0.55 1.2E-05 53.0 19.3 235 230-530 81-343 (373)
165 COG2179 Predicted hydrolase of 95.9 0.026 5.6E-07 55.4 7.5 66 586-665 23-88 (175)
166 PF06437 ISN1: IMP-specific 5' 95.6 0.88 1.9E-05 50.5 18.6 215 577-817 133-403 (408)
167 TIGR01656 Histidinol-ppas hist 95.6 0.016 3.5E-07 56.5 5.0 54 592-650 1-54 (147)
168 PF13844 Glyco_transf_41: Glyc 95.5 0.35 7.6E-06 55.9 16.1 203 331-562 248-467 (468)
169 COG0763 LpxB Lipid A disacchar 95.4 0.68 1.5E-05 51.7 17.2 157 356-546 178-365 (381)
170 PF08323 Glyco_transf_5: Starc 95.4 0.055 1.2E-06 57.6 8.7 94 211-304 113-232 (245)
171 TIGR01668 YqeG_hyp_ppase HAD s 95.3 0.059 1.3E-06 54.0 7.8 60 589-662 23-83 (170)
172 PF13439 Glyco_transf_4: Glyco 95.2 0.043 9.3E-07 53.7 6.6 92 231-341 80-177 (177)
173 PRK11009 aphA acid phosphatase 95.2 0.052 1.1E-06 57.4 7.3 71 577-649 49-140 (237)
174 PF07429 Glyco_transf_56: 4-al 95.1 2.2 4.8E-05 47.1 19.5 168 326-527 160-333 (360)
175 PRK13223 phosphoglycolate phos 94.9 0.11 2.5E-06 56.1 9.5 65 764-835 154-230 (272)
176 TIGR00213 GmhB_yaeD D,D-heptos 94.9 0.026 5.7E-07 56.8 4.1 52 592-650 2-53 (176)
177 PF13344 Hydrolase_6: Haloacid 94.8 0.025 5.5E-07 51.6 3.3 50 594-659 1-50 (101)
178 COG0546 Gph Predicted phosphat 94.7 0.11 2.4E-06 54.3 8.3 59 770-835 148-218 (220)
179 COG1778 Low specificity phosph 94.6 0.024 5.1E-07 55.0 2.6 49 767-822 82-134 (170)
180 TIGR03568 NeuC_NnaA UDP-N-acet 94.5 4.5 9.7E-05 45.7 21.2 72 441-526 264-338 (365)
181 PTZ00445 p36-lilke protein; Pr 94.5 0.11 2.4E-06 53.3 7.2 71 578-652 30-104 (219)
182 PLN02954 phosphoserine phospha 94.4 0.082 1.8E-06 55.0 6.6 60 766-834 153-223 (224)
183 PF09419 PGP_phosphatase: Mito 94.3 0.11 2.5E-06 51.7 6.9 65 586-663 36-108 (168)
184 PRK08942 D,D-heptose 1,7-bisph 94.3 0.066 1.4E-06 54.0 5.4 53 591-649 3-55 (181)
185 PHA02530 pseT polynucleotide k 94.3 0.076 1.6E-06 58.1 6.2 67 590-660 157-224 (300)
186 TIGR01261 hisB_Nterm histidino 94.2 0.064 1.4E-06 53.3 4.9 54 591-648 1-54 (161)
187 PF08645 PNK3P: Polynucleotide 94.2 0.044 9.6E-07 54.3 3.7 54 592-648 1-54 (159)
188 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.2 0.072 1.6E-06 56.5 5.6 56 590-661 7-64 (242)
189 PF02350 Epimerase_2: UDP-N-ac 94.1 12 0.00026 42.0 23.4 243 231-527 67-318 (346)
190 TIGR01525 ATPase-IB_hvy heavy 93.6 0.24 5.2E-06 59.3 9.2 66 585-662 358-424 (556)
191 TIGR01460 HAD-SF-IIA Haloacid 93.5 0.097 2.1E-06 55.4 5.0 50 594-659 1-53 (236)
192 PRK10671 copA copper exporting 93.4 0.27 5.8E-06 61.8 9.6 68 582-661 621-688 (834)
193 PRK05446 imidazole glycerol-ph 93.2 0.14 3E-06 57.3 6.0 55 590-648 1-55 (354)
194 smart00577 CPDc catalytic doma 93.2 0.18 3.8E-06 49.3 6.0 70 590-661 1-82 (148)
195 PF13579 Glyco_trans_4_4: Glyc 93.2 0.12 2.6E-06 49.5 4.7 84 230-334 72-160 (160)
196 PRK06769 hypothetical protein; 93.0 0.098 2.1E-06 52.6 4.0 53 589-649 2-54 (173)
197 PRK09552 mtnX 2-hydroxy-3-keto 92.8 0.089 1.9E-06 54.9 3.5 62 767-839 147-217 (219)
198 TIGR03492 conserved hypothetic 92.8 2.9 6.3E-05 47.8 16.0 137 366-528 210-365 (396)
199 TIGR01663 PNK-3'Pase polynucle 92.7 0.19 4.1E-06 59.1 6.2 70 589-662 166-248 (526)
200 PRK13582 thrH phosphoserine ph 92.6 0.19 4E-06 51.5 5.5 53 790-843 144-204 (205)
201 TIGR01491 HAD-SF-IB-PSPlk HAD- 92.6 0.33 7.1E-06 49.3 7.3 41 768-815 147-191 (201)
202 TIGR01685 MDP-1 magnesium-depe 92.5 0.27 5.9E-06 49.5 6.3 70 591-661 2-84 (174)
203 PRK13288 pyrophosphatase PpaX; 92.5 0.22 4.7E-06 51.5 5.8 62 769-837 140-213 (214)
204 TIGR01675 plant-AP plant acid 92.1 0.16 3.6E-06 53.2 4.3 69 590-659 76-159 (229)
205 TIGR01488 HAD-SF-IB Haloacid D 92.0 0.22 4.8E-06 49.5 5.0 36 764-806 138-175 (177)
206 TIGR01511 ATPase-IB1_Cu copper 91.9 0.59 1.3E-05 56.0 9.4 63 588-662 382-444 (562)
207 TIGR01512 ATPase-IB2_Cd heavy 91.9 0.44 9.4E-06 56.8 8.2 62 589-662 340-402 (536)
208 COG0707 MurG UDP-N-acetylgluco 91.9 16 0.00034 41.2 20.1 91 451-550 244-346 (357)
209 TIGR01533 lipo_e_P4 5'-nucleot 91.8 0.3 6.6E-06 52.5 6.0 73 589-662 73-160 (266)
210 PLN03243 haloacid dehalogenase 91.5 0.44 9.5E-06 51.2 6.9 25 582-606 15-39 (260)
211 PRK02797 4-alpha-L-fucosyltran 91.3 21 0.00045 39.2 19.1 124 364-509 146-272 (322)
212 cd03784 GT1_Gtf_like This fami 91.1 20 0.00043 40.6 20.5 72 444-526 292-371 (401)
213 PRK11033 zntA zinc/cadmium/mer 90.5 1 2.3E-05 55.7 9.8 68 583-662 540-607 (741)
214 TIGR03351 PhnX-like phosphonat 90.5 0.21 4.6E-06 51.7 3.3 59 769-834 147-219 (220)
215 PRK10826 2-deoxyglucose-6-phos 90.5 0.43 9.3E-06 49.7 5.6 53 772-831 153-216 (222)
216 TIGR01497 kdpB K+-transporting 90.1 1.2 2.6E-05 54.2 9.5 71 580-662 415-485 (675)
217 PRK13222 phosphoglycolate phos 90.0 0.49 1.1E-05 49.0 5.5 60 770-836 152-223 (226)
218 PRK14988 GMP/IMP nucleotidase; 89.9 0.39 8.5E-06 50.3 4.7 62 770-838 152-222 (224)
219 PF08235 LNS2: LNS2 (Lipin/Ned 89.7 0.45 9.7E-06 46.9 4.5 63 593-660 1-67 (157)
220 TIGR01545 YfhB_g-proteo haloac 89.6 0.77 1.7E-05 47.7 6.6 38 622-660 94-132 (210)
221 TIGR01686 FkbH FkbH-like domai 89.5 0.62 1.3E-05 51.7 6.1 65 590-659 2-67 (320)
222 TIGR01489 DKMTPPase-SF 2,3-dik 89.3 0.77 1.7E-05 46.0 6.2 30 764-803 145-174 (188)
223 TIGR01426 MGT glycosyltransfer 89.2 10 0.00022 43.0 15.9 99 444-555 279-386 (392)
224 TIGR03333 salvage_mtnX 2-hydro 89.1 0.79 1.7E-05 47.6 6.2 39 621-660 69-107 (214)
225 TIGR01680 Veg_Stor_Prot vegeta 89.0 0.48 1E-05 50.8 4.5 69 590-659 100-181 (275)
226 PF03767 Acid_phosphat_B: HAD 89.0 0.039 8.6E-07 58.1 -3.6 85 589-674 70-167 (229)
227 COG0637 Predicted phosphatase/ 88.6 0.76 1.7E-05 48.1 5.7 40 621-661 85-124 (221)
228 COG0647 NagD Predicted sugar p 88.4 0.52 1.1E-05 50.7 4.3 49 590-654 7-55 (269)
229 PRK08238 hypothetical protein; 87.9 1 2.2E-05 52.8 6.6 47 622-669 72-120 (479)
230 TIGR02250 FCP1_euk FCP1-like p 87.8 0.95 2E-05 44.7 5.5 72 588-661 3-95 (156)
231 PF12710 HAD: haloacid dehalog 87.8 1.2 2.6E-05 44.7 6.5 37 625-662 92-128 (192)
232 PF03031 NIF: NLI interacting 87.8 0.48 1E-05 46.6 3.4 67 592-660 1-72 (159)
233 KOG3742 Glycogen synthase [Car 87.7 15 0.00034 41.6 15.0 71 452-526 493-577 (692)
234 PLN02575 haloacid dehalogenase 87.7 1.1 2.4E-05 50.7 6.5 38 623-661 217-254 (381)
235 TIGR01522 ATPase-IIA2_Ca golgi 87.5 3.8 8.2E-05 52.0 11.9 70 581-662 493-567 (884)
236 COG4641 Uncharacterized protei 86.9 3.9 8.4E-05 45.6 10.0 117 441-562 239-362 (373)
237 TIGR01106 ATPase-IIC_X-K sodiu 86.7 2 4.3E-05 55.1 8.9 40 621-661 567-606 (997)
238 TIGR01456 CECR5 HAD-superfamil 86.3 1.2 2.7E-05 49.3 6.0 52 593-660 2-61 (321)
239 PF12689 Acid_PPase: Acid Phos 85.7 1.1 2.4E-05 44.8 4.6 72 591-663 3-86 (169)
240 TIGR03590 PseG pseudaminic aci 84.8 6.6 0.00014 42.6 10.7 97 362-493 170-266 (279)
241 TIGR02137 HSK-PSP phosphoserin 84.5 1.4 2.9E-05 45.6 4.8 59 768-838 132-199 (203)
242 PLN02940 riboflavin kinase 84.5 1.5 3.2E-05 50.0 5.5 36 622-658 93-128 (382)
243 COG0241 HisB Histidinol phosph 83.9 1.1 2.4E-05 45.2 3.8 51 591-648 5-56 (181)
244 PRK14986 glycogen phosphorylas 83.8 27 0.00058 43.3 16.0 150 362-519 542-702 (815)
245 PF05152 DUF705: Protein of un 83.5 4 8.7E-05 43.8 7.8 62 589-662 120-181 (297)
246 TIGR02251 HIF-SF_euk Dullard-l 83.1 2.1 4.6E-05 42.5 5.4 69 591-661 1-79 (162)
247 TIGR01517 ATPase-IIB_Ca plasma 82.8 6.7 0.00014 50.1 11.0 41 621-662 578-618 (941)
248 TIGR02245 HAD_IIID1 HAD-superf 82.2 2.5 5.3E-05 43.4 5.6 62 589-660 19-81 (195)
249 COG3914 Spy Predicted O-linked 81.2 59 0.0013 38.5 16.5 109 366-496 431-539 (620)
250 TIGR01657 P-ATPase-V P-type AT 81.1 18 0.00039 46.9 14.1 88 578-669 602-700 (1054)
251 PRK01021 lpxB lipid-A-disaccha 81.1 1.4E+02 0.0029 36.2 22.4 66 454-529 483-573 (608)
252 TIGR01491 HAD-SF-IB-PSPlk HAD- 80.9 1.6 3.4E-05 44.2 3.7 36 625-661 83-118 (201)
253 COG0381 WecB UDP-N-acetylgluco 80.4 1.1E+02 0.0024 34.7 22.4 136 363-529 205-343 (383)
254 PRK10725 fructose-1-P/6-phosph 80.3 0.98 2.1E-05 45.4 1.9 32 768-806 143-174 (188)
255 PRK13582 thrH phosphoserine ph 80.1 2.6 5.6E-05 43.0 5.0 13 592-604 2-14 (205)
256 TIGR01488 HAD-SF-IB Haloacid D 80.0 1.2 2.6E-05 44.2 2.4 35 625-660 76-110 (177)
257 KOG0210 P-type ATPase [Inorgan 79.3 12 0.00026 44.7 10.3 31 622-653 658-688 (1051)
258 PF06888 Put_Phosphatase: Puta 78.8 4.3 9.3E-05 42.9 6.2 36 764-803 146-181 (234)
259 PF00343 Phosphorylase: Carboh 78.2 1E+02 0.0022 37.9 18.0 149 362-519 443-603 (713)
260 PRK14089 ipid-A-disaccharide s 78.1 1.2E+02 0.0027 34.0 18.9 33 230-262 75-109 (347)
261 PRK11587 putative phosphatase; 78.0 1.2 2.6E-05 46.2 1.8 55 769-830 140-203 (218)
262 PF06941 NT5C: 5' nucleotidase 78.0 2 4.3E-05 43.7 3.4 30 621-651 72-101 (191)
263 TIGR01544 HAD-SF-IE haloacid d 77.8 9.1 0.0002 41.5 8.4 42 620-662 119-160 (277)
264 TIGR02137 HSK-PSP phosphoserin 77.6 3.7 8.1E-05 42.4 5.3 13 592-604 2-14 (203)
265 KOG1050 Trehalose-6-phosphate 77.1 0.18 3.9E-06 61.4 -5.4 228 576-822 174-444 (732)
266 TIGR01652 ATPase-Plipid phosph 76.2 9.6 0.00021 49.4 9.5 44 623-669 632-675 (1057)
267 KOG0206 P-type ATPase [General 75.9 14 0.0003 47.4 10.4 41 756-806 769-811 (1151)
268 PLN02779 haloacid dehalogenase 75.6 1.7 3.6E-05 47.5 2.1 56 769-831 204-269 (286)
269 KOG1615 Phosphoserine phosphat 75.4 4 8.6E-05 41.4 4.4 44 620-664 86-129 (227)
270 PRK11590 hypothetical protein; 75.2 1.6 3.4E-05 45.3 1.7 41 765-815 160-204 (211)
271 PLN02770 haloacid dehalogenase 75.2 1.6 3.5E-05 46.4 1.9 67 768-841 165-244 (248)
272 TIGR02252 DREG-2 REG-2-like, H 75.0 1.8 3.9E-05 44.1 2.1 30 770-806 163-193 (203)
273 cd04300 GT1_Glycogen_Phosphory 74.4 84 0.0018 39.1 16.2 150 362-519 529-689 (797)
274 PRK10517 magnesium-transportin 73.8 10 0.00023 48.1 8.8 41 621-662 549-589 (902)
275 TIGR01548 HAD-SF-IA-hyp1 haloa 73.2 1.6 3.5E-05 44.5 1.2 30 769-805 163-192 (197)
276 TIGR02009 PGMB-YQAB-SF beta-ph 72.8 1.9 4.2E-05 43.0 1.7 31 769-806 144-174 (185)
277 PHA02597 30.2 hypothetical pro 72.2 1.9 4E-05 43.9 1.4 54 769-831 132-195 (197)
278 PF12000 Glyco_trans_4_3: Gkyc 72.0 10 0.00022 38.1 6.5 49 211-261 43-94 (171)
279 PLN02954 phosphoserine phospha 71.4 5.7 0.00012 41.2 4.8 15 591-605 12-26 (224)
280 COG0474 MgtA Cation transport 71.1 13 0.00028 47.3 8.8 38 623-661 548-585 (917)
281 TIGR01422 phosphonatase phosph 70.9 2.3 5E-05 45.2 1.8 31 769-806 158-189 (253)
282 TIGR01490 HAD-SF-IB-hyp1 HAD-s 70.2 4.5 9.7E-05 41.1 3.7 44 764-814 151-198 (202)
283 COG0058 GlgP Glucan phosphoryl 70.2 1.1E+02 0.0025 37.6 15.7 137 362-511 486-630 (750)
284 TIGR02253 CTE7 HAD superfamily 70.1 4.6 9.9E-05 41.7 3.8 31 769-806 152-183 (221)
285 PRK14985 maltodextrin phosphor 70.0 63 0.0014 40.1 13.6 150 362-519 528-688 (798)
286 PRK10748 flavin mononucleotide 69.8 2.7 5.9E-05 44.3 2.0 58 769-833 165-237 (238)
287 COG4359 Uncharacterized conser 69.6 8 0.00017 38.9 5.0 61 621-683 72-138 (220)
288 TIGR01523 ATPase-IID_K-Na pota 67.8 17 0.00037 47.0 8.9 40 622-662 646-685 (1053)
289 PRK15122 magnesium-transportin 67.8 17 0.00038 46.1 8.8 41 621-662 549-589 (903)
290 KOG2116 Protein involved in pl 67.7 6.3 0.00014 46.6 4.5 83 590-677 529-616 (738)
291 TIGR02093 P_ylase glycogen/sta 66.7 84 0.0018 39.1 13.8 151 362-520 526-687 (794)
292 PRK10563 6-phosphogluconate ph 66.5 3.4 7.4E-05 42.8 1.9 37 768-811 143-183 (221)
293 TIGR01990 bPGM beta-phosphoglu 66.4 4.1 8.8E-05 40.7 2.4 32 768-806 142-173 (185)
294 TIGR02254 YjjG/YfnB HAD superf 66.1 3.6 7.8E-05 42.4 2.0 59 769-834 154-224 (224)
295 PRK13222 phosphoglycolate phos 65.7 8.8 0.00019 39.6 4.8 16 590-605 5-20 (226)
296 TIGR01993 Pyr-5-nucltdase pyri 63.5 4.2 9E-05 40.8 1.8 31 769-806 143-173 (184)
297 COG4087 Soluble P-type ATPase 62.7 7 0.00015 37.2 3.0 51 594-661 17-67 (152)
298 KOG3120 Predicted haloacid deh 62.3 17 0.00036 37.8 5.8 50 761-814 156-210 (256)
299 PF11019 DUF2608: Protein of u 62.0 19 0.00041 38.5 6.6 30 763-798 157-186 (252)
300 COG3882 FkbH Predicted enzyme 60.5 25 0.00054 40.6 7.3 83 578-661 209-293 (574)
301 PRK09449 dUMP phosphatase; Pro 60.2 4.5 9.8E-05 41.9 1.5 60 770-835 153-223 (224)
302 PF06888 Put_Phosphatase: Puta 60.1 9.5 0.00021 40.3 3.8 39 623-661 72-111 (234)
303 COG0816 Predicted endonuclease 60.1 43 0.00093 32.5 8.0 72 380-461 40-111 (141)
304 PF13477 Glyco_trans_4_2: Glyc 58.9 26 0.00057 32.8 6.5 39 225-264 69-108 (139)
305 TIGR01116 ATPase-IIA1_Ca sarco 58.2 10 0.00023 48.2 4.5 40 622-662 537-576 (917)
306 COG5083 SMP2 Uncharacterized p 57.4 6.1 0.00013 44.5 1.9 77 589-673 373-451 (580)
307 TIGR01549 HAD-SF-IA-v1 haloaci 57.1 4.7 0.0001 39.0 0.9 13 593-605 1-13 (154)
308 TIGR01428 HAD_type_II 2-haloal 56.1 6.1 0.00013 40.1 1.6 31 769-806 150-180 (198)
309 TIGR02247 HAD-1A3-hyp Epoxide 54.0 7 0.00015 40.1 1.6 30 770-806 155-184 (211)
310 TIGR01493 HAD-SF-IA-v2 Haloaci 54.0 5.9 0.00013 39.2 1.0 27 770-803 142-168 (175)
311 COG4087 Soluble P-type ATPase 51.3 29 0.00063 33.1 5.0 48 788-836 91-148 (152)
312 TIGR01454 AHBA_synth_RP 3-amin 51.0 17 0.00038 37.0 4.0 60 769-835 133-204 (205)
313 PLN03190 aminophospholipid tra 48.9 1.2E+02 0.0025 40.0 11.7 45 622-669 726-770 (1178)
314 COG4996 Predicted phosphatase 47.9 49 0.0011 31.6 5.9 68 592-660 1-78 (164)
315 PRK13288 pyrophosphatase PpaX; 46.3 14 0.00031 37.9 2.4 16 590-605 2-17 (214)
316 PRK04128 1-(5-phosphoribosyl)- 46.2 58 0.0013 34.3 7.0 62 578-658 31-93 (228)
317 PF12710 HAD: haloacid dehalog 45.6 11 0.00024 37.6 1.5 31 768-806 157-192 (192)
318 COG1819 Glycosyl transferases, 45.4 4.4E+02 0.0096 30.2 14.7 99 445-556 289-395 (406)
319 COG3700 AphA Acid phosphatase 44.9 38 0.00082 34.0 4.9 84 577-660 49-151 (237)
320 TIGR03333 salvage_mtnX 2-hydro 44.7 38 0.00082 34.9 5.4 62 766-838 142-212 (214)
321 PRK09456 ?-D-glucose-1-phospha 44.1 13 0.00028 37.9 1.7 14 592-605 1-14 (199)
322 PF13242 Hydrolase_like: HAD-h 44.0 19 0.00042 30.4 2.5 37 772-815 9-51 (75)
323 PF06258 Mito_fiss_Elm1: Mitoc 43.3 1.8E+02 0.004 32.1 10.7 109 362-497 146-259 (311)
324 KOG2884 26S proteasome regulat 43.1 3E+02 0.0064 28.7 11.0 48 488-539 186-237 (259)
325 PRK12446 undecaprenyldiphospho 42.4 3.4E+02 0.0073 30.4 12.9 70 451-528 244-326 (352)
326 PRK14988 GMP/IMP nucleotidase; 42.1 40 0.00088 35.1 5.1 15 591-605 10-24 (224)
327 COG1011 Predicted hydrolase (H 42.1 15 0.00032 37.9 1.9 17 589-605 2-18 (229)
328 PF09949 DUF2183: Uncharacteri 41.8 64 0.0014 29.4 5.7 36 379-418 49-84 (100)
329 TIGR00661 MJ1255 conserved hyp 41.4 64 0.0014 35.5 6.8 69 451-528 239-315 (321)
330 KOG2882 p-Nitrophenyl phosphat 41.3 31 0.00067 37.5 4.0 55 590-660 21-75 (306)
331 PRK06769 hypothetical protein; 40.9 33 0.00072 34.2 4.1 58 770-834 96-171 (173)
332 TIGR01449 PGP_bact 2-phosphogl 40.8 21 0.00046 36.4 2.8 58 769-833 143-212 (213)
333 PF15024 Glyco_transf_18: Glyc 40.3 95 0.0021 36.9 8.1 82 445-528 327-431 (559)
334 KOG1618 Predicted phosphatase 39.6 23 0.0005 38.7 2.8 39 593-646 37-78 (389)
335 KOG2134 Polynucleotide kinase 39.6 25 0.00055 39.4 3.1 56 589-647 73-128 (422)
336 KOG3120 Predicted haloacid deh 39.4 30 0.00066 35.9 3.5 19 588-606 10-28 (256)
337 TIGR01509 HAD-SF-IA-v3 haloaci 38.8 13 0.00029 36.6 0.9 11 594-604 2-12 (183)
338 PF13419 HAD_2: Haloacid dehal 38.4 27 0.00059 33.7 3.0 41 621-662 76-116 (176)
339 KOG4549 Magnesium-dependent ph 36.9 79 0.0017 30.1 5.4 63 591-659 18-81 (144)
340 PF13528 Glyco_trans_1_3: Glyc 36.4 2.8E+02 0.0061 29.9 11.0 68 448-523 239-316 (318)
341 COG2248 Predicted hydrolase (m 36.2 4.8E+02 0.01 28.1 11.5 44 223-284 57-100 (304)
342 PRK08942 D,D-heptose 1,7-bisph 36.0 61 0.0013 32.4 5.2 59 770-835 106-177 (181)
343 TIGR01454 AHBA_synth_RP 3-amin 34.7 45 0.00097 33.9 4.0 39 623-662 76-114 (205)
344 PRK10422 lipopolysaccharide co 34.6 3.4E+02 0.0073 30.2 11.4 87 362-467 183-270 (352)
345 TIGR01449 PGP_bact 2-phosphogl 34.3 46 0.00099 33.9 4.0 39 623-662 86-124 (213)
346 PF00702 Hydrolase: haloacid d 33.7 34 0.00073 34.6 2.9 28 772-806 183-212 (215)
347 KOG0202 Ca2+ transporting ATPa 32.7 2.1E+02 0.0045 35.7 9.4 58 585-661 565-622 (972)
348 PRK13478 phosphonoacetaldehyde 32.6 51 0.0011 35.2 4.2 64 769-839 160-259 (267)
349 TIGR02254 YjjG/YfnB HAD superf 31.9 58 0.0013 33.3 4.4 16 591-606 1-16 (224)
350 KOG0208 Cation transport ATPas 31.5 86 0.0019 39.5 6.1 224 577-834 650-902 (1140)
351 PRK09552 mtnX 2-hydroxy-3-keto 31.4 62 0.0014 33.4 4.5 37 623-660 75-111 (219)
352 PRK01122 potassium-transportin 30.9 87 0.0019 38.5 6.1 70 581-662 415-484 (679)
353 PLN02919 haloacid dehalogenase 29.4 35 0.00076 44.2 2.6 35 590-642 74-108 (1057)
354 COG4567 Response regulator con 29.4 1.6E+02 0.0035 29.0 6.4 76 449-524 41-124 (182)
355 PRK05632 phosphate acetyltrans 29.4 4.6E+02 0.0099 32.4 12.1 193 445-674 231-433 (684)
356 TIGR03351 PhnX-like phosphonat 29.3 65 0.0014 33.1 4.2 16 591-606 1-16 (220)
357 PRK05282 (alpha)-aspartyl dipe 29.0 5E+02 0.011 27.4 10.7 112 364-499 3-124 (233)
358 PLN00414 glycosyltransferase f 29.0 9.7E+02 0.021 27.9 14.2 109 445-562 317-441 (446)
359 TIGR00250 RNAse_H_YqgF RNAse H 28.9 2.4E+02 0.0052 26.9 7.6 70 380-459 35-104 (130)
360 cd04248 AAK_AK-Ectoine AAK_AK- 28.8 4.1E+02 0.0089 29.3 10.2 51 582-648 148-198 (304)
361 KOG2467 Glycine/serine hydroxy 28.8 1.2E+02 0.0025 34.2 5.9 56 749-814 340-400 (477)
362 TIGR01548 HAD-SF-IA-hyp1 haloa 28.7 67 0.0015 32.4 4.1 36 626-662 110-145 (197)
363 PRK10840 transcriptional regul 28.6 3E+02 0.0064 27.9 9.0 78 449-526 37-125 (216)
364 PRK11590 hypothetical protein; 28.6 80 0.0017 32.5 4.7 42 625-667 98-144 (211)
365 PF10307 DUF2410: Hypothetical 27.0 1.1E+02 0.0024 31.4 5.2 73 624-703 56-131 (197)
366 PF12038 DUF3524: Domain of un 26.7 48 0.001 33.1 2.4 30 282-311 114-143 (168)
367 COG4030 Uncharacterized protei 26.7 75 0.0016 33.2 3.8 51 621-673 82-132 (315)
368 COG0546 Gph Predicted phosphat 26.5 75 0.0016 32.9 4.0 39 623-662 90-128 (220)
369 TIGR01490 HAD-SF-IB-hyp1 HAD-s 26.4 80 0.0017 31.8 4.2 39 623-662 88-126 (202)
370 KOG0204 Calcium transporting A 26.3 1.9E+02 0.0042 36.1 7.6 168 578-823 593-774 (1034)
371 TIGR02253 CTE7 HAD superfamily 26.2 76 0.0016 32.5 4.0 39 623-662 95-133 (221)
372 PRK10563 6-phosphogluconate ph 25.9 79 0.0017 32.5 4.1 16 590-605 3-18 (221)
373 PHA03392 egt ecdysteroid UDP-g 25.5 1.2E+03 0.025 27.7 15.5 102 444-556 350-465 (507)
374 TIGR01647 ATPase-IIIA_H plasma 25.3 1.4E+02 0.0031 37.3 6.8 68 583-662 409-481 (755)
375 PF00702 Hydrolase: haloacid d 25.1 48 0.001 33.5 2.2 40 622-662 127-166 (215)
376 KOG4626 O-linked N-acetylgluco 24.9 5.8E+02 0.013 31.0 10.8 162 377-565 771-944 (966)
377 PRK00109 Holliday junction res 24.6 3.4E+02 0.0074 26.1 7.9 70 381-460 42-111 (138)
378 PF10933 DUF2827: Protein of u 24.6 8E+02 0.017 27.7 11.5 138 381-545 208-347 (364)
379 PRK14010 potassium-transportin 24.4 1.4E+02 0.003 36.8 6.3 73 578-662 408-480 (673)
380 TIGR01428 HAD_type_II 2-haloal 24.0 95 0.0021 31.2 4.2 39 623-662 93-131 (198)
381 PRK10826 2-deoxyglucose-6-phos 23.8 71 0.0015 32.9 3.3 17 589-605 5-21 (222)
382 KOG3109 Haloacid dehalogenase- 23.7 68 0.0015 33.4 2.9 191 590-830 14-223 (244)
383 PRK09449 dUMP phosphatase; Pro 23.4 1.6E+02 0.0034 30.2 5.8 16 590-605 2-17 (224)
384 TIGR01422 phosphonatase phosph 23.2 80 0.0017 33.3 3.6 39 622-661 99-137 (253)
385 PLN02770 haloacid dehalogenase 22.9 96 0.0021 32.8 4.1 39 623-662 109-147 (248)
386 COG2217 ZntA Cation transport 22.8 73 0.0016 39.3 3.5 39 768-817 587-629 (713)
387 PRK12704 phosphodiesterase; Pr 22.4 2.7E+02 0.0058 33.2 8.0 56 469-526 228-296 (520)
388 PRK13225 phosphoglycolate phos 22.0 1E+02 0.0022 33.3 4.1 39 623-662 143-181 (273)
389 PRK13587 1-(5-phosphoribosyl)- 21.9 2.5E+02 0.0055 29.6 7.0 62 578-658 32-96 (234)
390 KOG0331 ATP-dependent RNA heli 21.7 4.6E+02 0.01 31.1 9.5 95 364-469 129-225 (519)
391 COG4822 CbiK Cobalamin biosynt 21.4 9.6E+02 0.021 25.2 11.0 116 265-409 32-148 (265)
392 TIGR01458 HAD-SF-IIA-hyp3 HAD- 21.2 1.5E+02 0.0033 31.6 5.2 58 770-834 182-254 (257)
393 TIGR01489 DKMTPPase-SF 2,3-dik 20.8 1E+02 0.0022 30.4 3.6 37 624-661 74-110 (188)
394 PRK13587 1-(5-phosphoribosyl)- 20.7 2.2E+02 0.0047 30.1 6.2 59 578-658 149-212 (234)
395 PF12689 Acid_PPase: Acid Phos 20.7 3.5E+02 0.0076 27.1 7.3 84 693-798 48-132 (169)
396 PRK13396 3-deoxy-7-phosphohept 20.6 1E+03 0.022 26.9 11.6 65 443-525 168-232 (352)
397 COG2159 Predicted metal-depend 20.5 1.4E+02 0.0029 32.8 4.7 129 132-266 94-230 (293)
398 PRK10949 protease 4; Provision 20.0 1.6E+03 0.035 27.3 17.8 48 589-646 324-371 (618)
No 1
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=2.3e-169 Score=1507.59 Aligned_cols=803 Identities=86% Similarity=1.333 Sum_probs=739.9
Q ss_pred CCCCCCCCCCCCCChhhHHHHhhhhhHHHhhhhhccCCCCCCCC-CCCCcccccchhccccCCCCCCcccccCCCCCC--
Q 003145 1 MPGNSYNSNSSNIPPDRVTRLVREKIERDLRKSSRASHPNDVTD-NGGREVFEDEQRLRDGDNLGPSIVDEDLEGPAS-- 77 (844)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (844)
||||+|+|+++..+.+|++||+|+ ||||+.+++++..++.+ +.+.++.++++..+|..+.++..+++..+|.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (934)
T PLN03064 1 MPGNKYNGQSSVNPTSRVERLLRE---RELRKSERSSNANDDLDTNAGSEAFENDLRLSEGDNDSSSHVEQLLEGAAAES 77 (934)
T ss_pred CCCcccCCCCCCCCCchHHHHHHH---HHHHhhhcccccccccccchhhhhhhhhccccccccccccchHHHhhhhhhhc
Confidence 899999999977888899999999 99999999998655555 777899999999999999999999999998733
Q ss_pred CCCCCcccCCCCCCCCCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhhHHHH
Q 003145 78 TPNEGCERLDGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK 157 (844)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~ 157 (844)
...++|.+++++.+-++||||||||||+.++++++|.|++++++|||+++|.+++..+++||||+|..+++++++..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~rlIiVSNRlPv~~~~~~~g~~~~~~s~GGLvsaL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~ 157 (934)
T PLN03064 78 ALPDGCERQEGRRPLRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEVGQKALTK 157 (934)
T ss_pred cCCcccccccCCCCCCCCEEEEECCCCcceeecCCCceEEeECCCCcHHHhcccccCCeEEEeeCCCCCCCcchhHHHHH
Confidence 35688888888776689999999999999988778999999999999999999977899999999988776655666777
Q ss_pred hccCceEEEEecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE
Q 003145 158 ALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWC 237 (844)
Q Consensus 158 ~~~~~~~~pV~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwv 237 (844)
.+.+|+|+||||+++++++||+||||++|||+|||++..+.++....+.++.+|++|++||++||++|++.+++||+|||
T Consensus 158 ~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWV 237 (934)
T PLN03064 158 ALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWC 237 (934)
T ss_pred HhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 88899999999999999999999999999999999865443333222334467999999999999999999999999999
Q ss_pred eCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC
Q 003145 238 HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE 317 (844)
Q Consensus 238 HDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~ 317 (844)
||||||+||++||++.|+++||||+|||||++|+||+||+|++||+|||+||+|||||++|++||+++|.+++|++....
T Consensus 238 HDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~ 317 (934)
T PLN03064 238 HDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE 317 (934)
T ss_pred ecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCC
Q 003145 318 GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 397 (844)
Q Consensus 318 ~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~ 397 (844)
+++++||.++|.++|+|||++.|.+.+..++++++++.++++++++++|++|||||+.|||+++|+||++||++||+|++
T Consensus 318 ~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~ 397 (934)
T PLN03064 318 GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRD 397 (934)
T ss_pred eEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccC
Confidence 89999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHh
Q 003145 398 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 477 (844)
Q Consensus 398 ~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~ 477 (844)
+|+|+||+.|+|+++++|++|++++.++|++||++||+.+|.||+|+.+.+++++|.+||++|||||+||++||||||++
T Consensus 398 kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~ 477 (934)
T PLN03064 398 KVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSY 477 (934)
T ss_pred CEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 478 EFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 478 Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
||||||.+++|+||+|||+|++++||.+|++|||||++++|+||.+||+|+++||++|+++++++|.+||+++|+++|+.
T Consensus 478 Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~ 557 (934)
T PLN03064 478 EFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVS 557 (934)
T ss_pred HHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHH
Confidence 99999999999999999999999997789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHhhhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcC
Q 003145 558 ELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHD 637 (844)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d 637 (844)
+|+.+..+...+..+.++.|+.+.++++|++++++||||||||||++..+.|..+.+++.+....|+++++++|++|+++
T Consensus 558 ~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d 637 (934)
T PLN03064 558 ELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD 637 (934)
T ss_pred HHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC
Confidence 99998766666666667899999999999999999999999999999988886555566556778999999999999999
Q ss_pred CCCcEEEEcCCChhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce
Q 003145 638 PKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 717 (844)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s 717 (844)
|+|.|+|+|||++..|++||+.++++++||||++++..++.|...+++..+.+|++.+..+|++|+++|||++||.|+++
T Consensus 638 p~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~S 717 (934)
T PLN03064 638 PKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETS 717 (934)
T ss_pred CCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEcCcE
Confidence 99999999999999999999999999999999999987788985444556789999999999999999999999999999
Q ss_pred EEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 718 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 718 l~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
++||||++||+++..||+++.++|++..+.+.+++|+.|+++|||+|.++|||.|+++|++++..+.....++|||+|+|
T Consensus 718 LawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~G 797 (934)
T PLN03064 718 LVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIG 797 (934)
T ss_pred EEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeC
Confidence 99999999999999999999999966666677899999999999999999999999999998743222224689999999
Q ss_pred eC--CCchhhc
Q 003145 798 HF--LGKVLLT 806 (844)
Q Consensus 798 D~--~~nDMf~ 806 (844)
|+ .|+|||+
T Consensus 798 Dd~~~DEdmF~ 808 (934)
T PLN03064 798 HFLGKDEDIYT 808 (934)
T ss_pred CCCCCcHHHHH
Confidence 92 2567997
No 2
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.1e-153 Score=1382.90 Aligned_cols=727 Identities=36% Similarity=0.650 Sum_probs=658.9
Q ss_pred CCcEEEEEcCCCcceEecCC--CcEEEEecCCcHHHhhccc-c--cCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEE
Q 003145 93 RQRLLVVANRLPVSAIRRGE--DSWSLEISAGGLVSALLGV-K--EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPV 167 (844)
Q Consensus 93 ~~~livvsnrlP~~~~~~~~--~~~~~~~~~ggl~~~l~~~-~--~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV 167 (844)
+.||||||||||+.++++++ +.|++++++|||+++|.++ + ..+++||||+|..++.+++++.....+.+|+|+||
T Consensus 59 ~~rliiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv 138 (854)
T PLN02205 59 KDRIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPT 138 (854)
T ss_pred CCcEEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEe
Confidence 57999999999999988643 6899999999999999977 3 47899999999877765544444566778999999
Q ss_pred ecChHhhhhhhhhhhhhccccccCCCC-CCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCC-CCEEEEeCccchh
Q 003145 168 FLDEDIVHQYYNGYCNNILWPLFHYLG-LPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMF 244 (844)
Q Consensus 168 ~l~~~~~~~~Y~~f~n~~LWp~fH~~~-~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~-~DiVwvHDyhl~l 244 (844)
||+++++++||+||||++|||+|||+. ..+. ....|+ ..|++|++||++||++|++.+++ +|+|||||||||+
T Consensus 139 ~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~l 214 (854)
T PLN02205 139 FLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMV 214 (854)
T ss_pred eCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhH
Confidence 999999999999999999999999983 3321 123577 56999999999999999999998 6999999999999
Q ss_pred HHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC----Ccee
Q 003145 245 LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP----EGVE 320 (844)
Q Consensus 245 lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~----~~v~ 320 (844)
||.+||+++|+++||||+|||||++|+||+||||++||+|||+||+|||||++|++||++||+|++|+++.. .+++
T Consensus 215 lP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~ 294 (854)
T PLN02205 215 LPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLE 294 (854)
T ss_pred HHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998754 3578
Q ss_pred eCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC--CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCc
Q 003145 321 DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGK 398 (844)
Q Consensus 321 ~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~--~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~ 398 (844)
|+||.++|.++|+|||++.|...+..+++.+.+++++++++ ++++|++|||||+.|||.++|+||++||++||+|+++
T Consensus 295 ~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gk 374 (854)
T PLN02205 295 YYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGK 374 (854)
T ss_pred ECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCC
Confidence 99999999999999999999999999999999999999995 6999999999999999999999999999999999999
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 399 v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
|+||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++|+.|||++|||+++||+|||||||++|
T Consensus 375 vvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~E 454 (854)
T PLN02205 375 VVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYE 454 (854)
T ss_pred EEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccC---------------CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 479 FVACQDL---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 479 ama~~~~---------------~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
|+||+.+ ++|+||+|||+||+.+| .+|++|||||++++|+||.+||+||.+||+.|+++++++|
T Consensus 455 yia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v 533 (854)
T PLN02205 455 YIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYV 533 (854)
T ss_pred eeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999963 57999999999999999 7899999999999999999999999999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHHhHHHhh-hcc--------------ccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCC
Q 003145 544 TTHTAQEWAETFVSELNDTVVEAQ-LRI--------------KQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 608 (844)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~~~~~~~-~~~--------------~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~ 608 (844)
++||+.+|+++||.+|+.+++.+. .+. ...+++|+++.+.++|+++++|+|++||||||++...
T Consensus 534 ~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~- 612 (854)
T PLN02205 534 STHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS- 612 (854)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-
Confidence 999999999999999999865431 111 1126889999999999999999999999999998742
Q ss_pred CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc-CceEEeecceEEEecCC-eeeeccccc
Q 003145 609 PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEH 686 (844)
Q Consensus 609 p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~l~liaenG~~i~~~~~-~w~~~~~~~ 686 (844)
....|+++++++|++|++++++.|+|+|||++..|+++|+.+ +++++||||++++..++ .|.... ..
T Consensus 613 ----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~ 681 (854)
T PLN02205 613 ----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PV 681 (854)
T ss_pred ----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hh
Confidence 145688999999999999999999999999999999999987 69999999999996444 797543 33
Q ss_pred CChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCC
Q 003145 687 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 766 (844)
Q Consensus 687 ~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~g 766 (844)
.+..|++.+..+++.|++++||+++|.|+++++|||+++||+++..|++++..++ +..+.+.++.+..|+++|||+|++
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~g 760 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQG 760 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCC
Confidence 4678999999999999999999999999999999999999999999999999998 666666678888999999999999
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--c--------------CcEEEeCCCCcchhhhcCCHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--Q--------------FLIQVGSSINSLSKEKKRKVH 828 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g--------------~~Iavgna~~~~a~~~l~~~~ 828 (844)
+|||.|+++|++.+.. ..+++|+++|||| +.|| ||+ + ++|.||. .++.|+++|+++.
T Consensus 761 vnKG~Al~~Ll~~~~~---~g~~~d~vl~~GD-D~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~-~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQE---RGMLPDFVLCIGD-DRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ-KPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHh---cCCCcccEEEEcC-CccHHHHHHHhhhhccCCcccccccceeEEECC-CCccCeEecCCHH
Confidence 9999999999865320 1167899999999 8887 998 1 6789997 5889999999999
Q ss_pred HHHHHHHHHhhccC
Q 003145 829 QLFGIFLRFSYSGV 842 (844)
Q Consensus 829 ~v~~~l~~~~~~~~ 842 (844)
+|..+|+.|.....
T Consensus 836 eV~~lL~~L~~~~~ 849 (854)
T PLN02205 836 EIVRLMQGLASVSE 849 (854)
T ss_pred HHHHHHHHHHhcch
Confidence 99999999987654
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7e-152 Score=1369.23 Aligned_cols=748 Identities=70% Similarity=1.165 Sum_probs=675.5
Q ss_pred CCCCCCCCcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEE
Q 003145 87 DGRTFSRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (844)
Q Consensus 87 ~~~~~~~~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~p 166 (844)
++++. ++||||||||||+.++++++|.|++++++|||++||.+++..+++||||+|..+++++++..+...+.+++|+|
T Consensus 5 ~~~~~-~~rliiVsnrlp~~~~~~~~~~~~~~~~~ggl~~al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~p 83 (797)
T PLN03063 5 DARGE-RPRLLVVANRLPVSAKRTGEDSWSLEMSPGGLVSALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIP 83 (797)
T ss_pred cCccC-CCCEEEEECCCCccceecCCCceEEeeCCCCHHHHHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEE
Confidence 33333 78999999999999887767999999999999999999966799999999987665545556677788999999
Q ss_pred EecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHH
Q 003145 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (844)
Q Consensus 167 V~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp 246 (844)
||| ++++++||+||||++|||+|||++.++.+.......++..|++|++||++||++|++.+++||+|||||||||+||
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp 162 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLP 162 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHH
Confidence 999 9999999999999999999999843332221122334567999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEE
Q 003145 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLT 326 (844)
Q Consensus 247 ~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~ 326 (844)
++||++.|+++||||+|||||++|+||+||+|++|++|||+||+|||||++|++||+++|+++++++....++.++|+.+
T Consensus 163 ~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~ 242 (797)
T PLN03063 163 QYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVT 242 (797)
T ss_pred HHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999988778899999999
Q ss_pred EEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 327 ~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
+|.++|+|||++.|.+....+++.+....+++.++++++|++||||++.||+..+|+||++|++++|+++++++|+||+.
T Consensus 243 ~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~ 322 (797)
T PLN03063 243 RVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAV 322 (797)
T ss_pred EEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEec
Confidence 99999999999999987776777777778888888999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
|+++++++|+++++++++++++||++||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||||..+
T Consensus 323 psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~ 402 (797)
T PLN03063 323 PTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK 402 (797)
T ss_pred CCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHh
Q 003145 487 KGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEA 566 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 566 (844)
+|++|+||++|+++.+|.+|++|||+|++++|+||.++|+|+++||++|+++++++|++||+.+|++.||++|..+....
T Consensus 403 ~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~ 482 (797)
T PLN03063 403 KGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEA 482 (797)
T ss_pred CCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhh
Confidence 89999999999999997799999999999999999999999999999999999999999999999999999999988765
Q ss_pred hhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 567 QLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 567 ~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
.......++.|+.+.++++|+++++++|+|||||||++..+.|. ......|+++++++|++|+++|+|.|+|+|
T Consensus 483 ~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvS 556 (797)
T PLN03063 483 ELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQI------KEMDLGLHPELKETLKALCSDPKTTVVVLS 556 (797)
T ss_pred hhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCcc------ccccCCCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 54555667889999999999999999999999999998754331 114567899999999999999999999999
Q ss_pred CCChhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCC
Q 003145 647 GSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYAD 726 (844)
Q Consensus 647 GR~~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d 726 (844)
||+...|++||+.++++++||||++++..++.|....++..+.+|++.+.++|++|++++||++||.|+++++||||++|
T Consensus 557 GR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~ad 636 (797)
T PLN03063 557 RSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYAD 636 (797)
T ss_pred CCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCC
Confidence 99999999999998999999999999976788986544455778999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC--CCchh
Q 003145 727 VEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF--LGKVL 804 (844)
Q Consensus 727 ~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~--~~nDM 804 (844)
|+++..|++++.++|.+..+.+.+++|+.|+++|||+|.++|||.|+++|++++........++|||+|+||+ +|+||
T Consensus 637 p~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdm 716 (797)
T PLN03063 637 VEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDV 716 (797)
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHH
Confidence 9999999999999984445556679999999999999999999999999999862100111357999999993 36779
Q ss_pred hc-----c------------------------------CcEEEeCCCCcchhhhcCCHHHHHHHHHHHhhccCC
Q 003145 805 LT-----Q------------------------------FLIQVGSSINSLSKEKKRKVHQLFGIFLRFSYSGVQ 843 (844)
Q Consensus 805 f~-----g------------------------------~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~~~~~ 843 (844)
|+ . |+|+||. .++.|+++++++.||..+|..|..+..+
T Consensus 717 F~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~-~~s~A~y~l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 717 YTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQ-ARTKARYVLDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred HHhccccccccccccccccccccccccccccccccCceEEEEECC-CCccCeecCCCHHHHHHHHHHHhccCcc
Confidence 98 2 4589998 4899999999999999999999887654
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=6e-141 Score=1277.51 Aligned_cols=714 Identities=41% Similarity=0.736 Sum_probs=657.1
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCc--hhhhHHHHhccCceEEEEecC
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLD 170 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~--~~~~~~~~~~~~~~~~pV~l~ 170 (844)
+||||||||+|+.+.+++ |.|++++++|||++||.++ +..+++||||+|...+.. ..+..+...+.+|+|+||||+
T Consensus 1 ~~livvsnr~p~~~~~~~-~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 79 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED-GGVELTPSVGGLATGLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLS 79 (726)
T ss_pred CCEEEEEcCCCcceeecC-CceEEeeCCCchHHHHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCC
Confidence 479999999999987654 5899999999999999998 778999999999765542 222334566789999999999
Q ss_pred hHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHH
Q 003145 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (844)
Q Consensus 171 ~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~l 249 (844)
++++++||+||||++|||+|||++... .|+ ++|++|++||++||++|++.++++|+||||||||++||++|
T Consensus 80 ~~~~~~~y~gf~n~~lWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 80 AEEVDRYYEGFCNSTLWPLFHYFPEYT--------EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151 (726)
T ss_pred HHHHHHHHHHhhhccccchhcccCccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHH
Confidence 999999999999999999999985433 466 56999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEE
Q 003145 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 329 (844)
Q Consensus 250 r~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~ 329 (844)
|++.|+++||||+|+|||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.....+++.|+.++|.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~ 231 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVD 231 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887777889999999999
Q ss_pred EEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
++|+|||++.|.+....+++.+..+.+|+.++++++|++||||++.||+..+|+||++|++++|+++++++|+||+.|+|
T Consensus 232 v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr 311 (726)
T PRK14501 232 AFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR 311 (726)
T ss_pred EEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC
Confidence 99999999999998777777777788888888999999999999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCce
Q 003145 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 489 (844)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~ 489 (844)
++.++|+++++++++++++||++||+.+|.||+++.+.+++++++++|++|||||+||++||||||++||||||.+++|+
T Consensus 312 ~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~ 391 (726)
T PRK14501 312 TGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391 (726)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCce
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred EEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhhhc
Q 003145 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 569 (844)
Q Consensus 490 lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~ 569 (844)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|+.+|+++|++++++++.+||+.+|+++|+..|.++...+...
T Consensus 392 ~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~ 470 (726)
T PRK14501 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAF 470 (726)
T ss_pred EEEecccchhHHh-CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999998 679999999999999999999999999999999999999999999999999999999987654433
Q ss_pred cccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 570 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 570 ~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
....++.|+++.+.++|+.+++|||+|||||||++...+| ....++++++++|++|++++|+.|+|+|||+
T Consensus 471 ~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~ 541 (726)
T PRK14501 471 ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRD 541 (726)
T ss_pred ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCC
Confidence 3344678899999999999999999999999999976555 3567899999999999998999999999999
Q ss_pred hhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhh
Q 003145 650 RNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 729 (844)
Q Consensus 650 ~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~ 729 (844)
+..++++|+.+++++|++||++++..++.|.... ..+..|++.+.++++.+.++++|+++|.|+.+++|||+++|+++
T Consensus 542 ~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~ 619 (726)
T PRK14501 542 RDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLE--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPEL 619 (726)
T ss_pred HHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECC--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHH
Confidence 9999999999899999999999997777897643 24678999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc-
Q 003145 730 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT- 806 (844)
Q Consensus 730 ~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~- 806 (844)
+..++.++.+++ ...+.+..+.++.|+.++||+|+++|||.|++.|++. .++|+++|||| +.|| ||+
T Consensus 620 ~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~ 689 (726)
T PRK14501 620 GEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRA 689 (726)
T ss_pred HHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHh
Confidence 998899998888 6666667788899999999999999999999999983 46899999999 8888 997
Q ss_pred ----cCcEEEeCCCCcchhhhcCCHHHHHHHHHHHhh
Q 003145 807 ----QFLIQVGSSINSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 807 ----g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+++|+|||+ ++.|+++++++++|..+|+.|++
T Consensus 690 ~~~~~~~v~vG~~-~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 690 LPETAITVKVGPG-ESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred cccCceEEEECCC-CCcceEeCCCHHHHHHHHHHHhc
Confidence 589999995 77899999999999999999875
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-118 Score=1039.33 Aligned_cols=707 Identities=46% Similarity=0.786 Sum_probs=655.8
Q ss_pred CCcEEEEEcCCCcceE-ecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecC
Q 003145 93 RQRLLVVANRLPVSAI-RRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLD 170 (844)
Q Consensus 93 ~~~livvsnrlP~~~~-~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~ 170 (844)
+.|+|+|||+||+.+. +.+++.|.+++++|||++++.+. ++.+..||||.|..++++++.......+...+|+||+++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 81 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFREMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLD 81 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecC
Confidence 5789999999999984 44588999999999999999987 778899999999888888877777888899999999999
Q ss_pred hHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHH
Q 003145 171 EDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 249 (844)
Q Consensus 171 ~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~l 249 (844)
++...++|++|||++|||+|||...+.... .. .|+ +.|++|..+|++||++|++.|++||+|||||||||++|+++
T Consensus 82 ~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~--~~-~~~~~~w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 82 DELFDSYYNGYCKSILWPLFHYMLIPSEPA--FK-LFDLELWKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CchhhhhhhhhhhhcccceeecccCCCchh--hh-hhHHHHHHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhh
Confidence 999999999999999999999993332111 11 344 56999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccC----CCceeeCCeE
Q 003145 250 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRL 325 (844)
Q Consensus 250 r~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~----~~~v~~~g~~ 325 (844)
|+...+++||||+|.|||++|+|+|+|.|++|+.+|+++|+||||+++|+|||+++|.|+++++.. ..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 999999999999999999999999999999999999999999999999999999999999999876 4568999999
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~ 405 (844)
+.|.++|+|||+.+|......+.+..+..+++..+.++++|++|||+|+.||+..++.||++||++||+++++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999988888889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
.|+++++++|++++.++..++.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+.+
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHH
Q 003145 486 KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~ 565 (844)
+.+++|+|+|+|+.+.++++++++||||.++++.+|..+|+|+.+++..|+...+.++..|+...|+..|+..+.+....
T Consensus 399 ~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~ 478 (732)
T KOG1050|consen 399 KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKV 478 (732)
T ss_pred cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhh
Confidence 88999999999999999889999999999999999999999999999999999999999999999999999988888877
Q ss_pred hhhccccCCCCccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEE
Q 003145 566 AQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVL 645 (844)
Q Consensus 566 ~~~~~~~~~~~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~ 645 (844)
.. ...+.++.|..+.++..|++|++|+|++|||||+++... ..+...|+.||+||+|+|+|+
T Consensus 479 ~~-~~~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~-----------------~~~~~~l~~L~~dp~n~v~i~ 540 (732)
T KOG1050|consen 479 GF-LGFRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPRS-----------------IKAISILKDLCSDPKNIVYIV 540 (732)
T ss_pred cc-cccccccccChhHhhhhhhhccceEEEecccccccCCCC-----------------chHHHHHHHHhcCCCCeEEEE
Confidence 66 334445668999999999999999999999999887631 119999999999999999999
Q ss_pred cCCChhhHHHhhccc-CceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeec
Q 003145 646 SGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKY 724 (844)
Q Consensus 646 SGR~~~~l~~~~~~l-~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~ 724 (844)
|||++..+++|+... ++|++||||+++|.+++ |++.. .+++|++.+.++|++|++|||||++|.|+++++|||++
T Consensus 541 s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~---~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ 616 (732)
T KOG1050|consen 541 SGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV---LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRN 616 (732)
T ss_pred EccCchhhhhhccccccceeecccCceeccCCc-eeeec---ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeec
Confidence 999999999998777 89999999999998666 98765 68899999999999999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc--
Q 003145 725 ADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK-- 802 (844)
Q Consensus 725 ~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n-- 802 (844)
+|+++|..||+++.++| .. .+.++.|+.|+..|||+|.|+|||.|+.+++..+. .++||++|+|| +..
T Consensus 617 ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDe 686 (732)
T KOG1050|consen 617 ADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDE 686 (732)
T ss_pred cCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC------CCcceEEEecC-CCChH
Confidence 99999999999999999 44 67789999999999999999999999999999886 46899999999 654
Q ss_pred hhhc-------------cCcEEEeCCCCcchhhhcCCHHHHHHHHH
Q 003145 803 VLLT-------------QFLIQVGSSINSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 803 DMf~-------------g~~Iavgna~~~~a~~~l~~~~~v~~~l~ 835 (844)
|||. .|.++||. .++.|++.++++.+|..+|.
T Consensus 687 d~~~~~~~~~~~~~~~~~F~~~~g~-~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 687 DMFEFISKAKDPEKVEEIFACTVGQ-KPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred HHHHHHhhccCCcccceEEEEEcCC-CCcccccccCChHHHHhhcc
Confidence 4887 26788888 89999999999999998874
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=9.2e-116 Score=982.54 Aligned_cols=450 Identities=36% Similarity=0.638 Sum_probs=417.2
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHh-ccCceEEEEecCh
Q 003145 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKA-LAEKRCIPVFLDE 171 (844)
Q Consensus 94 ~~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~-~~~~~~~pV~l~~ 171 (844)
+||||||||+|+.. + . +.++|||++||.++ +..+|+||||+|...+++ . .+... -.++.|.||+|++
T Consensus 2 ~rLivVSNRlp~~~---~--~---~~~~GGL~~aL~~~l~~~~g~WvGW~g~~~~~~--~-~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 2 SRLVVVSNRIAPPD---E--H---KASAGGLAVGILGALKAAGGLWFGWSGETGNED--Q-PLKKVKKGNITWASFNLSE 70 (474)
T ss_pred CCEEEEECCCcCCC---C--C---CcCCCCcHHHHHHHHHhcCceEEEecCCCCCCc--c-cchhhhcCCceEEEecCCH
Confidence 68999999999632 1 1 45789999999999 888999999999753321 1 12222 2569999999999
Q ss_pred HhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHH
Q 003145 172 DIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 250 (844)
Q Consensus 172 ~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr 250 (844)
+++++||+||||++|||+|||+.... .|+ +.|++|++||++||++|++.++|||+||||||||++||++||
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~~--------~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELR 142 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCcc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHH
Confidence 99999999999999999999985333 466 569999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEE
Q 003145 251 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVA 329 (844)
Q Consensus 251 ~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~-~~v~~~g~~~~v~ 329 (844)
+++|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||++||.+++|++... ..+.++|+.++|.
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~ 222 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTE 222 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999988644 4567889999999
Q ss_pred EEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 330 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 330 v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
++|+|||++.|...+..+ +...++.+++.++++++|++||||||+|||+++|+||++||++||+|+++|+|+||+.|+|
T Consensus 223 ~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR 301 (474)
T PRK10117 223 VYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR 301 (474)
T ss_pred EEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCC
Confidence 999999999999887655 4667888999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc-CCCc
Q 003145 410 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKG 488 (844)
Q Consensus 410 ~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~-~~~g 488 (844)
+++++|++++++++++|++||++||+.+|.||+|+++.++++++.++|++|||+++||++||||||++||+|||. +++|
T Consensus 302 ~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~G 381 (474)
T PRK10117 302 GDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381 (474)
T ss_pred CccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999996 7899
Q ss_pred eEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 489 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 489 ~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
+||+|||+|++++| .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+..
T Consensus 382 vLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 382 VLVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred cEEEecccchHHHh-CCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 99999999999999 7899999999999999999999999999999999999999999999999999999998754
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=3.7e-114 Score=980.56 Aligned_cols=454 Identities=32% Similarity=0.607 Sum_probs=421.4
Q ss_pred EEcCCCcceEecCCCc--EEEEecCCcHHHhhccc-c-cCCcEEEEeCCCCCCCchhh-hHHH-HhccCceEEEEecChH
Q 003145 99 VANRLPVSAIRRGEDS--WSLEISAGGLVSALLGV-K-EFEARWIGWAGVNVPDEIGQ-KALT-KALAEKRCIPVFLDED 172 (844)
Q Consensus 99 vsnrlP~~~~~~~~~~--~~~~~~~ggl~~~l~~~-~-~~~~~Wvg~~g~~~~~~~~~-~~~~-~~~~~~~~~pV~l~~~ 172 (844)
||||||++++++++|. |++++++|||++||.++ + ..+|+||||+|...+++++. .... ....+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 7999999999876665 77799999999999988 4 47799999999753221111 1111 2235799999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|++.+++||+||||||||++||++||+
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~~--------~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~ 152 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPERF--------QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQ 152 (487)
T ss_pred HHHHHHhhhhhccccccccCCcccc--------CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHH
Confidence 9999999999999999999985433 466 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC--------------
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE-------------- 317 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~-------------- 317 (844)
+.|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++....
T Consensus 153 ~~~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~ 232 (487)
T TIGR02398 153 LRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTAL 232 (487)
T ss_pred hCCCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred -------ceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 318 -------GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 318 -------~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
++.++||.++|.++|+|||++.|.+....+++.+.+..+|++++++++|++|||||++|||+++|+||++||+
T Consensus 233 ~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~ 312 (487)
T TIGR02398 233 GEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLE 312 (487)
T ss_pred cccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHH
Confidence 3778899999999999999999999888888888899999999999999999999999999999999999999
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
+||+++++++||||+.|+|+++++|++++++++++|++||++||+.+|.||+|+++.++++++.+||++||||++||++|
T Consensus 313 ~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrD 392 (487)
T TIGR02398 313 RRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRD 392 (487)
T ss_pred hCccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (844)
|||||++||||||.+++||||+|||+|+++++ .+|++|||||++++|+||.+||+||.+||++|+++++++|.+||+.+
T Consensus 393 GmNLVa~Eyva~~~~~~GvLILSefaGaa~~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~ 471 (487)
T TIGR02398 393 GLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQR 471 (487)
T ss_pred ccCcchhhHHhhhcCCCCCEEEeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 99999999999998889999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003145 551 WAETFVSELND 561 (844)
Q Consensus 551 W~~~fl~~l~~ 561 (844)
|+++||.+|..
T Consensus 472 W~~~fl~~l~~ 482 (487)
T TIGR02398 472 WADEFLAAVSP 482 (487)
T ss_pred HHHHHHHHhhh
Confidence 99999998864
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=2.4e-114 Score=984.76 Aligned_cols=462 Identities=54% Similarity=0.930 Sum_probs=356.4
Q ss_pred cEEEEEcCCCcceEecC-CCc--EEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCch--hhhHHHHhccCceEEEEe
Q 003145 95 RLLVVANRLPVSAIRRG-EDS--WSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVF 168 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~-~~~--~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~--~~~~~~~~~~~~~~~pV~ 168 (844)
||||||||||+.+++++ +|. |+++.++|||+++|.++ +..+++||||+|...+.++ ++........+++|+|||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~ 81 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVF 81 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEE
Confidence 79999999999998876 666 88889999999999999 7799999999998776654 233344567899999999
Q ss_pred cChHhhhhhhhhhhhhccccccCCCCC-CcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHH
Q 003145 169 LDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 246 (844)
Q Consensus 169 l~~~~~~~~Y~~f~n~~LWp~fH~~~~-~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp 246 (844)
|+++++++||+||||++|||+|||... .+ ....|+ +.|++|++||++||++|++.+++||+|||||||||+||
T Consensus 82 l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-----~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP 156 (474)
T PF00982_consen 82 LSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-----DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLP 156 (474)
T ss_dssp E-HHHHHHHTTTHHHHTHHHHHTT-GG---------G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHH
T ss_pred cCHHHHHHHHHhhhhhccCccccccccccc-----ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHH
Confidence 999999999999999999999999732 11 123466 56999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCC--ceeeCCe
Q 003145 247 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGR 324 (844)
Q Consensus 247 ~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~--~v~~~g~ 324 (844)
++||+++|+++||||+|||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|++.... .++++||
T Consensus 157 ~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 157 QMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987654 7999999
Q ss_pred EEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 325 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 325 ~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
.++|.++|+|||++.|.+.+.++++.+...++++++++ +++|++|||+|++|||+++|+||++||++||+++++|+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999899999999999999988 59999999999999999999999999999999999999999
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
|+.|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 484 DLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.+++|+||+|||+|++++|++++++|||||++++|+||.+||+||++||+.|+++++++|.+||+.+|+++||++|++
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred cCCCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 989999999999999999955779999999999999999999999999999999999999999999999999999874
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-110 Score=929.38 Aligned_cols=464 Identities=49% Similarity=0.851 Sum_probs=431.2
Q ss_pred CCCCCCcEEEEEcCCCcceEec-CCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEE
Q 003145 89 RTFSRQRLLVVANRLPVSAIRR-GEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIP 166 (844)
Q Consensus 89 ~~~~~~~livvsnrlP~~~~~~-~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~p 166 (844)
++....|+|+||||+|+...+. +++......++|||+++|.++ +..+++|+||+|...+.++..........++...|
T Consensus 10 ~~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 10 SPLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred CcccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhhHhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 3455789999999999998643 466788899999999999999 78999999999988763332444555566899999
Q ss_pred EecChHhhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhH
Q 003145 167 VFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFL 245 (844)
Q Consensus 167 V~l~~~~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~ll 245 (844)
|+++.+++++||++|||++|||+|||+.... .|+ ..|+.|++||++||++|++.|++||+||||||||+|+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~--------~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~ 161 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDDV--------AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLV 161 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCcc--------ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhh
Confidence 9999999999999999999999999995333 365 5699999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee---eC
Q 003145 246 PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQ 322 (844)
Q Consensus 246 p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~---~~ 322 (844)
|+|||++.|+++||||+|+|||++|+|+|||+|++|++|||+||+|||||++|++||+++|+++++.. ....++ ++
T Consensus 162 P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~-~~~~~~~~~~~ 240 (486)
T COG0380 162 PQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVT-GDADIRFNGAD 240 (486)
T ss_pred HHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccc-ccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999865 222333 44
Q ss_pred CeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEE
Q 003145 323 GRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVL 401 (844)
Q Consensus 323 g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~L 401 (844)
|+.+++.++|+|||+..|.....++.++.++.++++.+.+ +++|++|||||++||++++++||++||++||+|++||+|
T Consensus 241 ~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvl 320 (486)
T COG0380 241 GRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVL 320 (486)
T ss_pred CceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEE
Confidence 7999999999999999999999888888888899988876 999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhh
Q 003145 402 LQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVA 481 (844)
Q Consensus 402 v~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama 481 (844)
+||+.|+|+++++|+.++.+++++|++||++||+++|.||+|++..++++++.+||+.|||+++||++||||||++||+|
T Consensus 321 iQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa 400 (486)
T COG0380 321 LQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVA 400 (486)
T ss_pred EEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 482 CQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 482 ~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
||.+++|+||+|||+|++.+| .++++|||||.+++|++|.+||+|+.+||++|++.+++.|.+||+++|+++|+.+|..
T Consensus 401 ~q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 401 AQRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred hhcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 999889999999999999999 7799999999999999999999999999999999999999999999999999999986
Q ss_pred h
Q 003145 562 T 562 (844)
Q Consensus 562 ~ 562 (844)
.
T Consensus 480 ~ 480 (486)
T COG0380 480 A 480 (486)
T ss_pred c
Confidence 3
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=3.3e-105 Score=913.20 Aligned_cols=452 Identities=56% Similarity=0.926 Sum_probs=421.6
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHH-HHhccCceEEEEecChH
Q 003145 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKAL-TKALAEKRCIPVFLDED 172 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~-~~~~~~~~~~pV~l~~~ 172 (844)
||||||||+|+.+.++ + +..++|||++||.++ +..+++||||+|...++++++..+ .....+++|+||||+++
T Consensus 1 ~livvsnr~p~~~~~~--~---~~~~~gGl~~al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 75 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG--G---LEPSAGGLAVALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEE 75 (456)
T ss_pred CEEEEECCCCccccCC--C---CCcCCCCHHHHHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHH
Confidence 6999999999988653 2 567899999999998 778999999999865533322222 34457899999999999
Q ss_pred hhhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHh
Q 003145 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (844)
Q Consensus 173 ~~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~ 251 (844)
+++.||+||||++|||+|||++... .|+ +.|++|++||++||++|.+.++++|+||||||||+++|++||+
T Consensus 76 ~~~~~y~gf~n~~lWPl~H~~~~~~--------~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 76 DVDGYYNGFSNSTLWPLFHYRPDLI--------RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHhhhhhcchhhccccccc--------ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHh
Confidence 9999999999999999999985433 466 5699999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEE
Q 003145 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAF 331 (844)
Q Consensus 252 ~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~ 331 (844)
+.|+++||||+|||||++|+|++||+|++|++|||+||+|||||++|++||+.+|.+++|++....++.+.|+.++|.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~vi 227 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAF 227 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999888888999999999999
Q ss_pred ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCC
Q 003145 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (844)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~ 411 (844)
|+|||++.|.+....+++.+....+|++++++++|++||||++.||++.+|+||++|++++|+++++++|+|++.|++++
T Consensus 228 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~ 307 (456)
T TIGR02400 228 PIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGD 307 (456)
T ss_pred cCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccC
Confidence 99999999998877777777788899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEE
Q 003145 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (844)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lV 491 (844)
+++|+++++++++++++||++||+.+|.||+++.+.++++++.++|++|||||+||++||||||++||||||....|++|
T Consensus 308 ~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vV 387 (456)
T TIGR02400 308 VPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLI 387 (456)
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976668899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 492 lSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
+|+++|+++++ .+|++|||+|++++|+||.++|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 388 lS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 388 LSEFAGAAQEL-NGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred EeCCCCChHHh-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999999999 599999999999999999999999999999999999999999999999999998875
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=5.6e-96 Score=843.00 Aligned_cols=456 Identities=54% Similarity=0.915 Sum_probs=425.5
Q ss_pred cEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhhHHHHhccCceEEEEecChHh
Q 003145 95 RLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDI 173 (844)
Q Consensus 95 ~livvsnrlP~~~~~~~~~~~~~~~~~ggl~~~l~~~-~~~~~~Wvg~~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~~ 173 (844)
||||||||+|+.++++++|.|+++.++|||++||.++ +..+++||||+|...+.+++.......+.+|+|+|||+++++
T Consensus 1 ~li~vsnr~p~~~~~~~~~~~~~~~~~ggl~~~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 80 (460)
T cd03788 1 RLVVVSNRLPVSIERDGDGEFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEE 80 (460)
T ss_pred CEEEEECCCCceeEEcCCCceEeccCCCcHHHHHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHH
Confidence 6999999999999988888999999999999999999 778999999999877665544456667789999999999999
Q ss_pred hhhhhhhhhhhccccccCCCCCCcccccccchhhH-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc
Q 003145 174 VHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 252 (844)
Q Consensus 174 ~~~~Y~~f~n~~LWp~fH~~~~~~~~~~~~~~~~~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~ 252 (844)
++.||+||||++|||+|||+.... .|+ +.|++|+++|+.||++|.+.++++|+||||||||+++|+++|++
T Consensus 81 ~~~~y~~f~~~~LWp~~H~~~~~~--------~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 81 FEGYYNGFSNEVLWPLFHYRLDLA--------RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHhhhhhcchhhcCCCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhh
Confidence 999999999999999999985432 365 56999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEEEE
Q 003145 253 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAF 331 (844)
Q Consensus 253 ~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~-~~v~~~g~~~~v~v~ 331 (844)
.++++||||+|||||++++|+++|++++|+++|++||+||||+++|++||+++|+++++++... ..++++|+.++|.++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vi 232 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAF 232 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999988654 678899999999999
Q ss_pred ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCC
Q 003145 332 PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD 411 (844)
Q Consensus 332 P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~ 411 (844)
|+|||++.|.+....++..+.+.+++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|||.|++++
T Consensus 233 p~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~ 312 (460)
T cd03788 233 PIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD 312 (460)
T ss_pred eCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC
Confidence 99999999998766666655566666667889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEE
Q 003145 412 VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 491 (844)
Q Consensus 412 ~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lV 491 (844)
+++++++++++++++++||.+||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||..++|++|
T Consensus 313 ~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV 392 (460)
T cd03788 313 VPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLI 392 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEE
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999977788899
Q ss_pred EeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 492 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 492 lSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
+|+++|+++.+ .+|++|||+|++++|++|.++|+|++++++.+++++++++++||+..|+++|+.+|
T Consensus 393 ~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 393 LSEFAGAAEEL-SGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred Eeccccchhhc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 99999999984 89999999999999999999999999999999999999999999999999999886
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.7e-35 Score=356.20 Aligned_cols=530 Identities=14% Similarity=0.156 Sum_probs=333.7
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh-----------------cCCccHHH-HHhhhcCCEEEE
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----------------TLPSRSDL-LRAVLAADLVGF 293 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r-----------------~lp~r~~l-l~~ll~aDlIgf 293 (844)
.|+|+.|+++-..++..|++.. ++|.+++.|.. ..+-++ .++.|-+. -..+..||.|.-
T Consensus 311 pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIa 387 (1050)
T TIGR02468 311 PYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVIT 387 (1050)
T ss_pred CCEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEE
Confidence 6999999999888888888765 78999999963 111111 01222222 223567999998
Q ss_pred ecHHHHHHHHHHHH-------HHhCcccCCCceeeCCe-EEEEEEEecccChhHHhhhhcCCchH-------------HH
Q 003145 294 HTYDYARHFVSACT-------RILGFEGTPEGVEDQGR-LTRVAAFPIGIDSERFIRALEINPVQ-------------VH 352 (844)
Q Consensus 294 ~t~~~~~~Fl~~~~-------~~l~~~~~~~~v~~~g~-~~~v~v~P~GID~~~f~~~~~~~~~~-------------~~ 352 (844)
.|......-...-. +.|.. ....++..+|+ ..++.|||+|||++.|.+.....+.. ..
T Consensus 388 sT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~ 466 (1050)
T TIGR02468 388 STRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPI 466 (1050)
T ss_pred eCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchh
Confidence 88766554222100 01000 00123333332 23899999999999998742211100 01
Q ss_pred HHHHHHHh--CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHH----HHHHHHHHHHH
Q 003145 353 IKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY----QRLTSQVHEIV 426 (844)
Q Consensus 353 ~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~----~~l~~~l~~lv 426 (844)
...+++.+ +++++|++|||+++.||+..+|+||..+.+..+.. ++.| ++|.+. +.++. .....++.+++
T Consensus 467 ~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLI 541 (1050)
T ss_pred hHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHH
Confidence 12344333 47889999999999999999999999986543221 2333 344321 11111 12234555566
Q ss_pred HHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC----cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc
Q 003145 427 GRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 502 (844)
Q Consensus 427 ~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l 502 (844)
.+.+.. + .|. |.|.++.++++.+|+.| ||||+||++||||++++|||||| .|+|+|..+|..+.+
T Consensus 542 ~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG----lPVVASdvGG~~EII 610 (1050)
T TIGR02468 542 DKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG----LPMVATKNGGPVDIH 610 (1050)
T ss_pred HHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----CCEEEeCCCCcHHHh
Confidence 554321 1 255 58999999999999988 69999999999999999999996 899999999998887
Q ss_pred --cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHHHhh-hcccc------C
Q 003145 503 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQ-LRIKQ------V 573 (844)
Q Consensus 503 --g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~-~~~~~------~ 573 (844)
|.+|++|+|.|++++|++|.++|+. ++.+.++..++++.+++|+|...++.+++.+..+...+. .+... .
T Consensus 611 ~~g~nGlLVdP~D~eaLA~AL~~LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~ 689 (1050)
T TIGR02468 611 RVLDNGLLVDPHDQQAIADALLKLVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEAS 689 (1050)
T ss_pred ccCCcEEEECCCCHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccc
Confidence 6789999999999999999999985 456677778888889999999999999998887653321 10000 0
Q ss_pred ---CCC-------------------------------cc----HHHHHHH---HH----------------------hcC
Q 003145 574 ---PPS-------------------------------LR----EADSIER---YL----------------------RSN 590 (844)
Q Consensus 574 ---~~~-------------------------------l~----~~~~~~~---y~----------------------~sk 590 (844)
.+. ++ ...+..+ .. .-.
T Consensus 690 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 769 (1050)
T TIGR02468 690 EDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRR 769 (1050)
T ss_pred cccCccccccccccchhhccccccccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCcccccc
Confidence 000 00 0011111 11 112
Q ss_pred CeEEE--EecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhc---CCCCcEEEEcCCChhhHHHhhcccCc---
Q 003145 591 NRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCH---DPKTTIVVLSGSDRNVLDKNFQEYNL--- 662 (844)
Q Consensus 591 ~rLi~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~---d~g~~V~I~SGR~~~~l~~~~~~l~l--- 662 (844)
++||+ +|+|+| +.. .+.+++.++.+.+ ...+.++++|||+...+...+...++
T Consensus 770 ~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~ 830 (1050)
T TIGR02468 770 KRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPT 830 (1050)
T ss_pred ceEEEEEeccCCC-CCh------------------HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 46666 899999 222 1233333444432 23477999999999999998877633
Q ss_pred ---eEEeecceEEEecC------Ceeeec--ccccCChHH-HHHHHHHHHHHHhcC--------CCceEeeccce--EEE
Q 003145 663 ---WLAAENGMFLRCTT------GKWMTT--MPEHLNMEW-VDSLKHVFEYFTERT--------PRSHFEQRETS--LVW 720 (844)
Q Consensus 663 ---~liaenG~~i~~~~------~~w~~~--~~~~~~~~w-~~~v~~i~~~~~~rt--------~gs~iE~k~~s--l~~ 720 (844)
.+||.-|+.|+..+ ..|..- ...+++..| .+.+.+.+..+.... ++...+....+ ..+
T Consensus 831 ~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~ 910 (1050)
T TIGR02468 831 DFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCY 910 (1050)
T ss_pred CCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceE
Confidence 58999999887631 223210 001344566 345665555543321 23333333322 333
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEE--cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE-Ee
Q 003145 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQ--GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC-IG 797 (844)
Q Consensus 721 hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~--g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla-iG 797 (844)
.|.-.|++.. ...+++.+.|... ...+.++. +..+++|.|...|||.||++|+.+++ ++.+.+++ +|
T Consensus 911 SY~v~d~~~~-~~v~elr~~Lr~~---gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwg------i~l~~v~VfaG 980 (1050)
T TIGR02468 911 AFKVKDPSKV-PPVKELRKLLRIQ---GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWG------IELANMAVFVG 980 (1050)
T ss_pred EEEecCcccC-ccHHHHHHHHHhC---CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcC------CChHHeEEEec
Confidence 3431122211 1135566666222 22345443 34899999999999999999999999 78898855 99
Q ss_pred eCCCc-h---hhcc--CcEEE
Q 003145 798 HFLGK-V---LLTQ--FLIQV 812 (844)
Q Consensus 798 D~~~n-D---Mf~g--~~Iav 812 (844)
| +.| | |+.| .+|.+
T Consensus 981 d-SGntD~e~Ll~G~~~tvi~ 1000 (1050)
T TIGR02468 981 E-SGDTDYEGLLGGLHKTVIL 1000 (1050)
T ss_pred c-CCCCCHHHHhCCceeEEEE
Confidence 9 555 6 7763 45554
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=308.35 Aligned_cols=244 Identities=27% Similarity=0.429 Sum_probs=207.4
Q ss_pred CccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 576 ~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
.+....+...|..+++++|++||||||++...+| ....++++++++|++|+++++|.|+|+|||+..+++.
T Consensus 3 ~~~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~ 73 (266)
T COG1877 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELER 73 (266)
T ss_pred hhhhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH
Confidence 3456677888999999999999999999999888 5788999999999999999999999999999999999
Q ss_pred hhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHH
Q 003145 656 NFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (844)
Q Consensus 656 ~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~ 735 (844)
+++..+++++||||++++..++.|.....+..++.|++.+.+++++|.+++||+++|.|++++.|||++++++.+..++.
T Consensus 74 ~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~ 153 (266)
T COG1877 74 LFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALAL 153 (266)
T ss_pred hcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHH
Confidence 99966999999999999765555433444567789999999999999999999999999999999999998876665555
Q ss_pred HHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc------c
Q 003145 736 DMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------Q 807 (844)
Q Consensus 736 el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------g 807 (844)
...... .. ...+++..|+..|||+|.++|||.++++++++... ..++++|.|| |.+| ||+ +
T Consensus 154 ~~~~~~-~~---~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~------~~~~~~~aGD-D~TDE~~F~~v~~~~~ 222 (266)
T COG1877 154 AEAATL-IN---ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPF------DGRFPIFAGD-DLTDEDAFAAVNKLDS 222 (266)
T ss_pred HHHHhc-cc---cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCC------CCCcceecCC-CCccHHHHHhhccCCC
Confidence 444433 11 11288999999999999999999999999998762 2358999999 6555 998 6
Q ss_pred CcEEEeCCCCcchhhhcCCHHHHHHHHHHHhhc
Q 003145 808 FLIQVGSSINSLSKEKKRKVHQLFGIFLRFSYS 840 (844)
Q Consensus 808 ~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~~~ 840 (844)
++|.||.. .+.|+++.+.+...+.++..+.+.
T Consensus 223 ~~v~v~~~-~t~a~~~~~~~~~~~~~l~~~~~~ 254 (266)
T COG1877 223 ITVKVGVG-STQAKFRLAGVYGFLRSLYKLLEA 254 (266)
T ss_pred ceEEecCC-cccccccccccHHHHHHHHHHHHH
Confidence 88999987 667899999999999988887653
No 14
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.2e-33 Score=310.84 Aligned_cols=235 Identities=17% Similarity=0.232 Sum_probs=192.3
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.+|.++++++|||||||||++.+++| ..+.++++++++|++|+++ ..|+|+|||++..++++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 347889999999999999999999988 5789999999999999985 47999999999999999998899
Q ss_pred eEEeecceEEEecC-----Ceeeeccc-----------ccCChHHHHHHHHHHHH---HHhcCCCceEeeccceEEEEee
Q 003145 663 WLAAENGMFLRCTT-----GKWMTTMP-----------EHLNMEWVDSLKHVFEY---FTERTPRSHFEQRETSLVWNYK 723 (844)
Q Consensus 663 ~liaenG~~i~~~~-----~~w~~~~~-----------~~~~~~w~~~v~~i~~~---~~~rt~gs~iE~k~~sl~~hy~ 723 (844)
+++|+||++++... ..|...+. .....+|.+.+.++++. +++++||+++|.|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 99999999987421 11221100 01245677666666655 5667899999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhcccCcCCCCC-c--eEEEEeeC
Q 003145 724 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAI-D--YVLCIGHF 799 (844)
Q Consensus 724 ~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~~~~~~~~~~-d--~vlaiGD~ 799 (844)
+++++++..++.++...+ ... ..+.+..|++++||+| .++|||.|+++|+++++ +.. + .++||||
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~~---~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g------~~~~d~~~pi~iGD- 328 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KKY---PRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLG------LSNCDDVLPIYIGD- 328 (384)
T ss_pred CCCchHHHHHHHHHHHHH-HhC---CceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcC------CCcccceeEEEECC-
Confidence 998887666666666655 321 2488899999999999 59999999999999988 332 2 3599999
Q ss_pred CCch--hhc-------cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhh
Q 003145 800 LGKV--LLT-------QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 800 ~~nD--Mf~-------g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+.|| ||+ |++|+|||+ .++.|+++|+++.+|..||++|..
T Consensus 329 D~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~ 378 (384)
T PLN02580 329 DRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVT 378 (384)
T ss_pred CchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHH
Confidence 8887 997 789999997 478899999999999999999875
No 15
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=6.4e-35 Score=307.69 Aligned_cols=219 Identities=34% Similarity=0.550 Sum_probs=144.7
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 003145 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (844)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~~ 674 (844)
||||||||++...+| ....++++++++|++|+++++|.|+|+|||+...++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999998877 57889999999999999999999999999999997666666689999999999997
Q ss_pred cCC-eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-CCCeE
Q 003145 675 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS-NASVE 752 (844)
Q Consensus 675 ~~~-~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~-~~~~~ 752 (844)
.++ .|.... ...+..|++.+.++++++.+++||+++|.|+++++|||++++++++..++.++.+++ .+... ..+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 555 465422 456678999999999999999999999999999999999999999988888888888 43333 34799
Q ss_pred EEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--------cCcEEEeCCC----Cc
Q 003145 753 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--------QFLIQVGSSI----NS 818 (844)
Q Consensus 753 v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--------g~~Iavgna~----~~ 818 (844)
++.|+++|||+|.+++||.|++.|+++++.. ..++++++|+|| |.+| ||+ +++|.||... ++
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~---~~~~~~~l~~GD-D~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t 225 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFA---GPKPDFVLYIGD-DRTDEDAFRALRELEEGGFGIKVGSVSVGEKPT 225 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTTS----EEEEES---------
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCcc---ccccceeEEecC-CCCCHHHHHHHHhcccCCCCeEEEeeccccccc
Confidence 9999999999999999999999999987621 123689999999 7666 887 4689999975 79
Q ss_pred chhhhcCCHH
Q 003145 819 LSKEKKRKVH 828 (844)
Q Consensus 819 ~a~~~l~~~~ 828 (844)
.|++++++|.
T Consensus 226 ~A~y~l~~p~ 235 (235)
T PF02358_consen 226 AASYRLDDPS 235 (235)
T ss_dssp ----------
T ss_pred ccccccccCC
Confidence 9999999873
No 16
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=2.5e-32 Score=297.01 Aligned_cols=232 Identities=16% Similarity=0.253 Sum_probs=186.7
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEe
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~lia 666 (844)
..+++.+||+||||||+|.+++| ..+.++++++++|++|++ +..|+|+|||++..++++++..++++++
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~laG 162 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYAG 162 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEEE
Confidence 55678999999999999999888 467899999999999996 4689999999999999999877899999
Q ss_pred ecceEEEec--CCeeee----cccccCChHHHHHHHHHHHHH---HhcCCCceEeeccceEEEEeecCChhhhHHHHHHH
Q 003145 667 ENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARDM 737 (844)
Q Consensus 667 enG~~i~~~--~~~w~~----~~~~~~~~~w~~~v~~i~~~~---~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el 737 (844)
+||++++.. +..|+. .. .....+|.+.+.++++.+ +.++||+++|.|+++++||||+++++. +.++
T Consensus 163 sHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~----~~~l 237 (354)
T PLN02151 163 SHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENK----WSDL 237 (354)
T ss_pred eCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHH----HHHH
Confidence 999999853 235642 11 123557888777777665 478999999999999999999998752 2334
Q ss_pred HHHHhcCCCCCCC-eEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc-------
Q 003145 738 LQHLWTGPISNAS-VEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------- 806 (844)
Q Consensus 738 ~~~L~~~~~~~~~-~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------- 806 (844)
..++ ..++.+.+ +.+..|++++||+|. ++|||.|++.|++.++.. ....++++|||| |.+| ||+
T Consensus 238 ~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~---~~~~~~pvyiGD-D~TDEDaF~~L~~~~~ 312 (354)
T PLN02151 238 ANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYA---NCTDVFPIYIGD-DRTDEDAFKILRDKKQ 312 (354)
T ss_pred HHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccc---cCCCCeEEEEcC-CCcHHHHHHHHhhcCC
Confidence 4444 33334434 789999999999995 999999999999987631 012468999999 6555 887
Q ss_pred cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhh
Q 003145 807 QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 807 g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~ 839 (844)
|++|.||.. .++.|+++|+++++|..||++|..
T Consensus 313 G~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 313 GLGILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CccEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 688999963 578999999999999999999875
No 17
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=2.7e-32 Score=297.49 Aligned_cols=236 Identities=15% Similarity=0.228 Sum_probs=185.1
Q ss_pred HHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce
Q 003145 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 663 (844)
Q Consensus 584 ~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~ 663 (844)
.++...++.+||+||||||++.+++| ..+.++++++++|++|++ ++.|+|+|||++..+.++++..+++
T Consensus 104 ~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l~~l~ 172 (366)
T PLN03017 104 MEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKLAELY 172 (366)
T ss_pred HHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcccCce
Confidence 34456688999999999999988767 345899999999999994 7899999999999999997665789
Q ss_pred EEeecceEEEecCCeeee-------cccccCChHHHHHHHHH---HHHHHhcCCCceEeeccceEEEEeecCChhhhHHH
Q 003145 664 LAAENGMFLRCTTGKWMT-------TMPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQ 733 (844)
Q Consensus 664 liaenG~~i~~~~~~w~~-------~~~~~~~~~w~~~v~~i---~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~q 733 (844)
++++||++++..++.|.. .. ......|.+.+.++ ++.+++++||++||.|+++++||||+++++.
T Consensus 173 l~g~hGa~i~~p~~~~~~~~~~~~~~~-~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~---- 247 (366)
T PLN03017 173 YAGSHGMDIKGPAKGFSRHKRVKQSLL-YQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK---- 247 (366)
T ss_pred EEEcCCcEEecCCCcceeccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----
Confidence 999999999854333321 00 11234576666666 5567788999999999999999999998753
Q ss_pred HHHHHHHHhcCCCCCC-CeEEEEcCcEEEEEeC-CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc--hhhc---
Q 003145 734 ARDMLQHLWTGPISNA-SVEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK--VLLT--- 806 (844)
Q Consensus 734 a~el~~~L~~~~~~~~-~~~v~~g~~~vEV~p~-gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n--DMf~--- 806 (844)
+.++..++ ...+.+. .+.+..|++++||+|. ++|||.|+++|++.++... .+.++++|||| |.+ |||+
T Consensus 248 ~~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDEDaF~~L~ 322 (366)
T PLN03017 248 WSELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDEDAFKMLR 322 (366)
T ss_pred HHHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHHHHHHHh
Confidence 23344444 3333343 3789999999999995 9999999999999987311 12568999999 654 5887
Q ss_pred ----cCcEEEeCC-CCcchhhhcCCHHHHHHHHHHHhhc
Q 003145 807 ----QFLIQVGSS-INSLSKEKKRKVHQLFGIFLRFSYS 840 (844)
Q Consensus 807 ----g~~Iavgna-~~~~a~~~l~~~~~v~~~l~~~~~~ 840 (844)
|++|.||.. .++.|+++|+++.+|..||++|.+.
T Consensus 323 ~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~ 361 (366)
T PLN03017 323 DRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEW 361 (366)
T ss_pred hcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHH
Confidence 589999973 5788999999999999999999763
No 18
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=4.2e-32 Score=290.79 Aligned_cols=224 Identities=18% Similarity=0.202 Sum_probs=185.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecce
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 670 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~ 670 (844)
+++|++||||||++...+| ....++++++++|++|++++++.|+|+|||+...+.++++.+++.++++||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999987766 3678999999999999987899999999999999999999888889999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCC
Q 003145 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 750 (844)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~ 750 (844)
+++..++.|.. ...+.+|...+.+.++.+..++||+++|.|+.+++|||++++.+ .....++.+.+ .+... .
T Consensus 85 ~i~~~~~~~~~---~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~--~ 156 (266)
T PRK10187 85 ERRDINGKTHI---VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP--Q 156 (266)
T ss_pred eeecCCCCeee---ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--c
Confidence 99864444432 23455677777888888888999999999999999999877422 11123333343 22121 3
Q ss_pred eEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc------cCcEEEeCCCCcchhh
Q 003145 751 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT------QFLIQVGSSINSLSKE 822 (844)
Q Consensus 751 ~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~------g~~Iavgna~~~~a~~ 822 (844)
+.+.+|+.++||+|+++|||.|+++|+++++ +..++++|||| +.|| ||+ +++|+|||+. +.|++
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~~g~~vavg~a~-~~A~~ 228 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRLGGISVKVGTGA-TQASW 228 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhcCCeEEEECCCC-CcCeE
Confidence 6677899999999999999999999999998 67889999999 8888 988 7899999985 55899
Q ss_pred hcCCHHHHHHHHHHHhh
Q 003145 823 KKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 823 ~l~~~~~v~~~l~~~~~ 839 (844)
+|+++++|..||..|..
T Consensus 229 ~l~~~~~v~~~L~~l~~ 245 (266)
T PRK10187 229 RLAGVPDVWSWLEMITT 245 (266)
T ss_pred eCCCHHHHHHHHHHHHH
Confidence 99999999999999874
No 19
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=4.1e-32 Score=287.83 Aligned_cols=227 Identities=21% Similarity=0.293 Sum_probs=192.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeec
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 668 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaen 668 (844)
||+++|+|||||||++...+| ....++++++++|++|++++++.|+|+|||+...+...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999987777 36789999999999999999999999999999888776655578999999
Q ss_pred ceEEEecCC--eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecC-ChhhhHHHHHHHHHHHhcCC
Q 003145 669 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 745 (844)
Q Consensus 669 G~~i~~~~~--~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~-d~e~~~~qa~el~~~L~~~~ 745 (844)
|++++.++. .|... ......|++.+.++++++.++ ||+++|.|+++++||||.+ |++++..++.++..++ ..
T Consensus 72 G~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~~- 146 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNL--TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-LS- 146 (244)
T ss_pred CEEEecCCCcceeeec--hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-hc-
Confidence 999985222 35432 122257999999999999887 9999999999999999999 8888888888888776 32
Q ss_pred CCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc----------cCcEEEe
Q 003145 746 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT----------QFLIQVG 813 (844)
Q Consensus 746 ~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~----------g~~Iavg 813 (844)
..++.++.|+.++|++|.++|||.+++.++++++ ...++++|||| +.|| ||+ +++|+|+
T Consensus 147 --~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 147 --FTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred --CCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 3368889999999999999999999999999988 56789999999 8888 886 3688894
Q ss_pred CC-CCcchhhhcCCHHHHHHHHHHHh
Q 003145 814 SS-INSLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 814 na-~~~~a~~~l~~~~~v~~~l~~~~ 838 (844)
.. ..+.|+++++++++|..+|++|.
T Consensus 218 ~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 218 SGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred cCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 22 46679999999999999999875
No 20
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.94 E-value=1.1e-25 Score=253.34 Aligned_cols=300 Identities=23% Similarity=0.214 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCC
Q 003145 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 289 (844)
Q Consensus 210 ~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aD 289 (844)
.+..|...++.++.++... ...|+||+|+++.+.++...+. .++|+.+++|+++.... . ..+..+.+.+..+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d 137 (372)
T cd03792 65 EKEIYLEWNEENAERPLLD-LDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYD 137 (372)
T ss_pred HHHHHHHHHHHHhcccccc-CCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCC
Confidence 4677877787776653222 2569999999998777666543 36789999999875321 0 01122333345678
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEE
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVM 366 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vi 366 (844)
.+.+.+.++++.+ + . ..++ ++|+|||+......... ......+++++ .++++|
T Consensus 138 ~~i~~~~~~~~~~----------------~--~--~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i 193 (372)
T cd03792 138 AAVFHLPEYVPPQ----------------V--P--PRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYI 193 (372)
T ss_pred EEeecHHHhcCCC----------------C--C--CceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEE
Confidence 7776653322111 1 1 1234 89999997532111111 12333455556 378899
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003145 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (844)
Q Consensus 367 l~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~ 446 (844)
++|||+++.||+..+|+||+.+.++.|++ .|+++|.+...+ +++.++.+++. +..+.. ..|.++..
T Consensus 194 ~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~~-~~~~~~~~~~~---~~~~~~------~~v~~~~~ 259 (372)
T cd03792 194 TQVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATDD-PEGWIVYEEVL---EYAEGD------PDIHVLTL 259 (372)
T ss_pred EEEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCCC-chhHHHHHHHH---HHhCCC------CCeEEEec
Confidence 99999999999999999999998877765 488888653221 22333222222 221111 13665433
Q ss_pred C-CCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003145 447 S-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (844)
Q Consensus 447 ~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~ 523 (844)
. ++.+++.++|++||+|++||.+||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.+
T Consensus 260 ~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~ 333 (372)
T cd03792 260 PPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILY 333 (372)
T ss_pred CCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHH
Confidence 3 489999999999999999999999999999999996 899999999989887 567998874 6789999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 524 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
++++ ++++.++.+++++++ +.|+|...++++++.+++
T Consensus 334 ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 334 LLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 9986 457778888888887 689999999999987764
No 21
>PLN02939 transferase, transferring glycosyl groups
Probab=99.94 E-value=9.8e-25 Score=259.76 Aligned_cols=321 Identities=16% Similarity=0.187 Sum_probs=222.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecC-----CCChhhh-hcCCcc-
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPSR- 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fp~~e~~-r~lp~r- 278 (844)
..-|.-+.++.++.+...-..+|||++||||..++|.++.+. ..+++++|++|.- ||...+- ..+|+.
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~ 669 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQ 669 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHH
Confidence 444555566666655544345699999999999985554432 3567999999985 3322211 112211
Q ss_pred ---------------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhh
Q 003145 279 ---------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 279 ---------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
..+..++..||.|..-++.|++.-.. ..--|++. .+..+..++.+||||||++.|.|.
T Consensus 670 l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~-----~L~~~~~Kl~gIlNGID~e~wnPa 742 (977)
T PLN02939 670 LDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD-----TLKFHSKKFVGILNGIDTDTWNPS 742 (977)
T ss_pred ccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH-----HhccccCCceEEecceehhhcCCc
Confidence 11234677799999999998887554 11111111 022345678999999999999875
Q ss_pred hcC--------Cch---HHHHHHHHHHhC------CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 344 LEI--------NPV---QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 344 ~~~--------~~~---~~~~~~lr~~~~------~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
... ... ......++++++ +.++|++||||.+.||+..+++|+..+++ + ++.|+++|.
T Consensus 743 tD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~----dvqLVIvGd 816 (977)
T PLN02939 743 TDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L----GGQFVLLGS 816 (977)
T ss_pred cccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c----CCEEEEEeC
Confidence 321 000 011245677763 35899999999999999999999998874 2 255887874
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+ ++ ..+++++.+++.+.+.. ..|.| .+..+......+|+.||+||+||.+|||||+.+|||+||
T Consensus 817 G-----p~-~~~e~eL~~La~~l~l~------drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG--- 880 (977)
T PLN02939 817 S-----PV-PHIQREFEGIADQFQSN------NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG--- 880 (977)
T ss_pred C-----Cc-HHHHHHHHHHHHHcCCC------CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC---
Confidence 2 21 12345666666654321 12554 677887888899999999999999999999999999996
Q ss_pred CceEEEeCCCCchhhc-----------cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHhcCHHHHH
Q 003145 487 KGVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWA 552 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~l-----------g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v~~~~~~~W~ 552 (844)
.|+|++..+|..+.+ |.+|++|+|.|+++++++|.+++. ..++.+.++.++. ....|+|...+
T Consensus 881 -tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A 957 (977)
T PLN02939 881 -SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSA 957 (977)
T ss_pred -CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHH
Confidence 799999999998765 247999999999999999999986 2444555554433 34679999999
Q ss_pred HHHHHHHHHhH
Q 003145 553 ETFVSELNDTV 563 (844)
Q Consensus 553 ~~fl~~l~~~~ 563 (844)
+.++..+..+.
T Consensus 958 ~qYeeLY~~ll 968 (977)
T PLN02939 958 SQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHHH
Confidence 99988887664
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=245.43 Aligned_cols=273 Identities=18% Similarity=0.229 Sum_probs=203.8
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
...|+|++|+.. .+...++++.|++++.+.+|..|.. +.+ ..++.|.+.+. +...++.. .
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~-------------~~~~~ii~~S~-~~~~~~~~---~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELL-------------DKNAKIIVPSQ-FLKKFYEE---R 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHh-------------ccCCEEEEcCH-HHHHHHHh---h
Confidence 357999999843 3445567778999999999987631 211 13567776664 33333321 1
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~ 386 (844)
+ ...++.++|+|||.+.|.+.. ...+++.+ .++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578999999998876421 11234444 26789999999999999999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
++.+++|++ .|+++|.+......+...+.+++.+++.+++. .++ +.|.++.+++..+|+.||++|+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 999888875 48888865432222333556667766665442 355 47889999999999999999999
Q ss_pred CC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 467 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 467 S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~-lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
|. .||||++++|||||| .|+|+|..+|..+.+ |.+|+ +++|.|++++|++|.+++++++ +.++.+++++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 599999999999996 899999999888877 56787 6789999999999999998764 45677777766
Q ss_pred H-HhcCHHHHHHHHHHHHHHh
Q 003145 543 V-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 543 v-~~~~~~~W~~~fl~~l~~~ 562 (844)
+ ++|+|..-++++++.|+..
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHHh
Confidence 4 7899999999999888753
No 23
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.94 E-value=9.1e-25 Score=253.23 Aligned_cols=310 Identities=23% Similarity=0.262 Sum_probs=208.6
Q ss_pred HHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC----CCCeEEEEEecCCCC----hhhhhcC--Cc---------
Q 003145 217 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFPS----SEIHRTL--PS--------- 277 (844)
Q Consensus 217 vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~----~~~~i~~flH~Pfp~----~e~~r~l--p~--------- 277 (844)
.++...+.+...-...|+|++||+|-.++|.++++.. .+.|++++.|..-.. .+.+..+ |+
T Consensus 104 f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (466)
T PRK00654 104 FSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLE 183 (466)
T ss_pred HHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhh
Confidence 3343334333322367999999999999999998652 468999999986211 1111111 10
Q ss_pred ----cHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhhhcCC----
Q 003145 278 ----RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN---- 347 (844)
Q Consensus 278 ----r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~~~~~---- 347 (844)
...+..++..||.|...++.+++..... ..| .++. +..+..++.++|+|||.+.|.+.....
T Consensus 184 ~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~ 255 (466)
T PRK00654 184 FYGQISFLKAGLYYADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAAN 255 (466)
T ss_pred cCCcccHHHHHHHhcCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccc
Confidence 1112234566777777776665543210 000 0010 112345789999999999987642100
Q ss_pred -------chHHHHHHHHHHhC----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHH
Q 003145 348 -------PVQVHIKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ 416 (844)
Q Consensus 348 -------~~~~~~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~ 416 (844)
...+....++++++ +.++|++|||+++.||+..+++|+++++++ ++.|+++|.+ + +
T Consensus 256 ~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~--- 322 (466)
T PRK00654 256 YSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P--- 322 (466)
T ss_pred cChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---
Confidence 00112345666663 568999999999999999999999998753 2558878742 1 2
Q ss_pred HHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCC
Q 003145 417 RLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (844)
Q Consensus 417 ~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~ 496 (844)
.+++++++++.+.+. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|| .|+|+|..+
T Consensus 323 ~~~~~l~~l~~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~g 389 (466)
T PRK00654 323 ELEEAFRALAARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTG 389 (466)
T ss_pred HHHHHHHHHHHHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCC
Confidence 234556666655432 24444554 66667899999999999999999999999999996 799999999
Q ss_pred Cchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 497 GAAQSL--G------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 497 G~~~~l--g------~~g~lvnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
|..+.+ + .+|++|+|.|+++++++|.+++.. .++.+.++.++.. ...++|..-++++++.++++
T Consensus 390 G~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 390 GLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999887 4 569999999999999999999863 2233444444433 26789999999988777654
No 24
>PLN02316 synthase/transferase
Probab=99.94 E-value=2.4e-24 Score=260.97 Aligned_cols=311 Identities=14% Similarity=0.120 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhc-----CCCCeEEEEEecCCCChhhhhcCCccHHHHHh
Q 003145 210 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (844)
Q Consensus 210 ~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~-----~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ 284 (844)
...-|-.++++.++.+.+.-...|||++||+|-.++|.++++. .+++|+++++|..-. ....+-.+
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~ 758 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKA 758 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHH
Confidence 3455556666666666544346799999999999999999874 356899999996421 11224456
Q ss_pred hhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC--C-----c----h-HHH
Q 003145 285 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVH 352 (844)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~--~-----~----~-~~~ 352 (844)
+..||.|.--++.|++..... + . ...+..++.+||+|||++.|.|.... + + . ...
T Consensus 759 l~~AD~ViTVS~tya~EI~~~-----~------~--l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~ 825 (1036)
T PLN02316 759 MAYADKATTVSPTYSREVSGN-----S------A--IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAA 825 (1036)
T ss_pred HHHCCEEEeCCHHHHHHHHhc-----c------C--cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhh
Confidence 778999999898887665431 0 0 11124578999999999988764210 0 0 0 111
Q ss_pred HHHHHHHhC----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH
Q 003145 353 IKELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 428 (844)
Q Consensus 353 ~~~lr~~~~----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~ 428 (844)
...++++++ +.++|++||||.+.||+..+++|+.++++. .+.||++|.+ |+ ..++.++.+++.+
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~------~~qlVIvG~G-----pd-~~~e~~l~~La~~ 893 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER------NGQVVLLGSA-----PD-PRIQNDFVNLANQ 893 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc------CcEEEEEeCC-----CC-HHHHHHHHHHHHH
Confidence 234666663 568999999999999999999999998763 2557777643 22 1345667777776
Q ss_pred hhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c---
Q 003145 429 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G--- 503 (844)
Q Consensus 429 IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g--- 503 (844)
++..+.. .|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|| .|+|++..+|..+.+ +
T Consensus 894 Lg~~~~~----rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~ 964 (1036)
T PLN02316 894 LHSSHHD----RARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHD 964 (1036)
T ss_pred hCccCCC----eEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhccccccc
Confidence 6543321 2544 444554444589999999999999999999999999995 689999999999987 2
Q ss_pred ----------CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhH
Q 003145 504 ----------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 ----------~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|++|+|.|+++++++|.++|....+.+..+....++.+ ..|+|..-++.++..++.+.
T Consensus 965 ~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 965 KERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred cccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 3799999999999999999999865433443344445554 56999999999998877653
No 25
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.94 E-value=9.9e-25 Score=251.14 Aligned_cols=312 Identities=15% Similarity=0.181 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChh--hhh------------cCCccHH
Q 003145 215 IKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLPSRSD 280 (844)
Q Consensus 215 ~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e--~~r------------~lp~r~~ 280 (844)
..+...+...+.+.....|+|++|+++..++..++++.. +.|++++.|....... +.. .++.+-.
T Consensus 98 ~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (439)
T TIGR02472 98 DELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIE 176 (439)
T ss_pred HHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHH
Confidence 334444444444333346999999988777777776644 6789999997532210 000 0010100
Q ss_pred H-HHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH
Q 003145 281 L-LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (844)
Q Consensus 281 l-l~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (844)
+ ...+..+|.|...+...+..-+. ... .-...++.++|+|||++.|.+....++.. ..+..++.
T Consensus 177 ~~~~~~~~ad~ii~~s~~~~~~~~~---~~~-----------~~~~~ki~vIpnGvd~~~f~~~~~~~~~~-~~~~~~~~ 241 (439)
T TIGR02472 177 AEEETLAHASLVITSTHQEIEEQYA---LYD-----------SYQPERMQVIPPGVDLSRFYPPQSSEETS-EIDNLLAP 241 (439)
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---hcc-----------CCCccceEEECCCcChhhcCCCCccccch-hHHHHHHh
Confidence 1 12234567666555432221110 000 11235788999999999997643221111 12222222
Q ss_pred h---CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHH----HHHHHHHHHHHHhhcc
Q 003145 360 F---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQ----RLTSQVHEIVGRINGR 432 (844)
Q Consensus 360 ~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~----~l~~~l~~lv~~IN~~ 432 (844)
+ .++++|++|||+++.||+..+|+||..+.+..+.. +++| ++|.+. +.++++ ++.+++.+++.+++-
T Consensus 242 ~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~~~~~~~~~l- 315 (439)
T TIGR02472 242 FLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKVLLLIDRYDL- 315 (439)
T ss_pred hccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHHHHHHHHcCC-
Confidence 2 36789999999999999999999998642211111 2222 233211 111121 222334444444322
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhC----cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCe
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGA 506 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g 506 (844)
.+ .|. |.|.++.+++.++|+.| |+||+||.+||||++++|||||| .|+|+|..+|..+.+ |.+|
T Consensus 316 ---~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~G 385 (439)
T TIGR02472 316 ---YG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRNG 385 (439)
T ss_pred ---Cc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCcE
Confidence 12 255 58889999999999988 99999999999999999999996 899999999999888 4679
Q ss_pred EEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
++|+|.|++++|++|.++++++ +++.++.+++++++ +.|+|+.-++++++.|
T Consensus 386 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 386 LLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999864 57777888888876 6789999888887654
No 26
>PRK14098 glycogen synthase; Provisional
Probab=99.93 E-value=2.2e-24 Score=250.55 Aligned_cols=323 Identities=14% Similarity=0.177 Sum_probs=219.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC------CCCeEEEEEecCCC----Chhhhh-cC
Q 003145 207 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFP----SSEIHR-TL 275 (844)
Q Consensus 207 ~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~------~~~~i~~flH~Pfp----~~e~~r-~l 275 (844)
|.+...-|.-.+++.++.+.+.--..|+|++||||-.++|.++++.. .++|++++.|.... +.+.+. .+
T Consensus 117 ~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 117 LKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 43445566666777776665432246999999999999999998653 47899999998531 111111 12
Q ss_pred Ccc------------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhh
Q 003145 276 PSR------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 276 p~r------------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
|+. .-+-.++..||.|..-++.|++........-.|++. . ...+..++.+||+|||++.|.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---~--l~~~~~kl~~I~NGID~~~~~p~ 271 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---V--LEERKMRLHGILNGIDTRQWNPS 271 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---H--HHhcCCCeeEEeCCccccccCCc
Confidence 211 123345677888887777776653220000001100 0 11134578999999999999864
Q ss_pred hcCC--------ch---HHHHHHHHHHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcC
Q 003145 344 LEIN--------PV---QVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (844)
Q Consensus 344 ~~~~--------~~---~~~~~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p 407 (844)
.... .. .+....+++.++ +.++|++|||+.+.||+..+++|+.++++. ++.|+++|.+
T Consensus 272 ~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G 345 (489)
T PRK14098 272 TDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGSG 345 (489)
T ss_pred ccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCC
Confidence 3210 00 011234555552 567999999999999999999999998752 3668888742
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCC
Q 003145 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (844)
Q Consensus 408 ~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~ 487 (844)
+. .+++++++++.+... .|.+ .+.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 346 -----~~--~~~~~l~~l~~~~~~--------~V~~-~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G---- 405 (489)
T PRK14098 346 -----DK--EYEKRFQDFAEEHPE--------QVSV-QTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG---- 405 (489)
T ss_pred -----CH--HHHHHHHHHHHHCCC--------CEEE-EEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----
Confidence 21 234566666654321 2554 677899999999999999999999999999999999995
Q ss_pred ceEEEeCCCCchhhc------cCCeEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 003145 488 GVLILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 488 g~lVlSe~~G~~~~l------g~~g~lvnP~d~~~~A~ai~~aL~m--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 559 (844)
.|+|++..+|..+.+ +.+|++|+|.|+++++++|.+++.+ .++.+.++.++. ..+.++|+.-++++++.+
T Consensus 406 ~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY 483 (489)
T PRK14098 406 TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLY 483 (489)
T ss_pred CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHH
Confidence 689999999988766 3479999999999999999998742 233333333322 236789999999998877
Q ss_pred HHh
Q 003145 560 NDT 562 (844)
Q Consensus 560 ~~~ 562 (844)
+++
T Consensus 484 ~~~ 486 (489)
T PRK14098 484 REL 486 (489)
T ss_pred HHH
Confidence 654
No 27
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.93 E-value=2.3e-24 Score=250.56 Aligned_cols=312 Identities=21% Similarity=0.256 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCC--CCeEEEEEecCCCC----hhhhhcCCcc---------
Q 003145 214 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFPS----SEIHRTLPSR--------- 278 (844)
Q Consensus 214 Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~--~~~i~~flH~Pfp~----~e~~r~lp~r--------- 278 (844)
+...+++.++.+...-...|+|++||+|..++|.++++... ++|++++.|...+. .+.+..++..
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33444555554444334679999999999999999987754 38999999986421 2222221111
Q ss_pred ------HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhhhcCC---
Q 003145 279 ------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 347 (844)
Q Consensus 279 ------~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~~~~~--- 347 (844)
..+..++..||.|...++.|++..... ..+ .+++ +..+..++.++|+|||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~-----~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFG-----YGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCC-----ccchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 012234556777777666665543221 000 0010 011345788999999999987642110
Q ss_pred --------chHHHHHHHHHHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHH
Q 003145 348 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 414 (844)
Q Consensus 348 --------~~~~~~~~lr~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~ 414 (844)
.-......++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ + +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D-P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-H-
Confidence 00112334666663 5789999999999999999999999987542 568878642 1 2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC
Q 003145 415 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 494 (844)
Q Consensus 415 ~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe 494 (844)
.+++++++++.+.+. .+.+ .+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|.
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRV-IIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEE-EEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 234566666544221 2444 455688889999999999999999999999999999996 7999999
Q ss_pred CCCchhhc--c------CCeEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 495 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 495 ~~G~~~~l--g------~~g~lvnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.+|..+.+ + .+|++++|.|+++++++|.+++.+ .++.+.++.++.. .+.++|..-++++++.+++
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHHh
Confidence 99999988 4 679999999999999999999873 3344455544433 3579999999998877654
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.93 E-value=9.9e-24 Score=240.24 Aligned_cols=277 Identities=17% Similarity=0.119 Sum_probs=202.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCC-hhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPS-SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~Pfp~-~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
+.|+|++|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-..+-.+|.|...+....+.+..
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 4699999988776777777663 2244667788864221 11110 01112223344689888777644433321
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
+|. ...++.++|+|||++.|.+.... ...+...|++|||+.+.||+..+|+|++.+
T Consensus 192 -~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 121 23468899999999988642110 112456799999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
.+++|+ +.|+++|. ++.. +++++++.+.+. ...+.|.|.++.+++..+|+.||+||+||.
T Consensus 248 ~~~~~~----~~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVA----FRYRILGI-----GPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCC----EEEEEEEC-----chhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 887776 45887864 3433 344444444332 123446899999999999999999999998
Q ss_pred C------cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 469 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 469 ~------EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
. ||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++++++++++++.++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999996 799999999999888 66899999999999999999999977778888888898
Q ss_pred HHH-HhcCHHHHHHHHHHHHHH
Q 003145 541 THV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 541 ~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
+++ ++|++...++.+.+.+++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHhh
Confidence 887 669999999988876653
No 29
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.93 E-value=3.4e-23 Score=235.34 Aligned_cols=289 Identities=19% Similarity=0.207 Sum_probs=212.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh---cCCc--cHHHH--HhhhcCCEEEEecHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLL--RAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r---~lp~--r~~ll--~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..|+|++|++...+++.++++. .++|+++++|..++-...+. ..+. ...++ ..+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999987666666666543 46889999997542111110 0111 11222 134468999999887777664
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~ 380 (844)
.. .+ ....++.++|+|||.+.|.+.. ....+.++ .++++|+++||+.+.||+..
T Consensus 180 ~~----~~-----------~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 RH----YD-----------ADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred HH----cC-----------CChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 31 11 1235788999999998886421 11234444 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCCCCceEEEEEEcCCCCCh-HHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~-~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
+++|++++++++|+. ++.|+++|.+.. ++ +..+ ++++++.+.+.. ..|. |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~----~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPD----ALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHH----HHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999888873 477888886542 23 3333 344444443321 1255 5899999999999999
Q ss_pred CcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 460 ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
||++++||..||||++++|||||| .|+|+|..+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence 999999999999999999999996 799999999988877 5679999999999999999999985 446667777
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
.+++.++.++|+..++.+++.+.++
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7788888999999999998877654
No 30
>PRK14099 glycogen synthase; Provisional
Probab=99.93 E-value=2.3e-23 Score=241.74 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=198.7
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecC-----CCChhhhhc--CCcc-------------HHHHHhhhcCC
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPSR-------------SDLLRAVLAAD 289 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~P-----fp~~e~~r~--lp~r-------------~~ll~~ll~aD 289 (844)
..|||++||||-.++|.+++.. ..+++++++.|.. ||. ..+.. +|+. .-+-.++..||
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 4699999999999999998753 3567899999974 221 11111 1110 01333455677
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCC-----ch------HHHHHHHHH
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN-----PV------QVHIKELQE 358 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~-----~~------~~~~~~lr~ 358 (844)
.|.--++.+++.....- .-.|++ + .+..+..++.+||+|||++.|.+..... .. ......+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~----~-~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLD----G-LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChH----H-HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 77666665554432100 000000 0 0011345789999999999998743210 00 011234566
Q ss_pred HhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003145 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (844)
Q Consensus 359 ~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~ 433 (844)
+++ +.++|++||||.+.||+..+++|+..+++. ++.|+++|.+ + + ++++++++++.+...
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~~-- 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYPG-- 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCCC--
Confidence 652 356888899999999999999999998753 2558878752 2 2 234555656544221
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHH-HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--c-------
Q 003145 434 GTLTAVPIHHLDRSLDFPALCALY-AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 503 (844)
Q Consensus 434 g~~~~~pv~~~~~~v~~~el~aly-~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g------- 503 (844)
.+.++.|. .+++..+| +.||+||+||.+||||++.+|||+|| .|+|+|..+|..+.+ +
T Consensus 351 ------~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 351 ------QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred ------CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 24445665 67888877 56999999999999999999999995 688999999998876 2
Q ss_pred --CCeEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 504 --AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 --~~g~lvnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|++|+|.|+++++++|.+++. ..++.+.++.++++ .+.++|+.-++++++.++++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 36999999999999999998432 23445555555443 478999999999988877664
No 31
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.92 E-value=1.7e-23 Score=237.48 Aligned_cols=284 Identities=17% Similarity=0.195 Sum_probs=197.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCC--hhh-hh-cCCcc--------HH---HHHhhhcCCEEEEec
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------SD---LLRAVLAADLVGFHT 295 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~--~e~-~r-~lp~r--------~~---ll~~ll~aDlIgf~t 295 (844)
..|+|+.| +.+....++++..|++++..++|..+-. .+. |. ..+.+ .. ....+-.+|.|...+
T Consensus 87 ~pdvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 87 RPDVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred CCCEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 35999999 4556667788889999998877654321 110 10 11111 11 123456678777666
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEec-
Q 003145 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDR- 371 (844)
Q Consensus 296 ~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdR- 371 (844)
......|.. .. ..++.++|+|||.+.|.+.... ...++... .++++|+++||
T Consensus 165 ~~~~~~~~~----------------~~--~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vgR~ 220 (396)
T cd03818 165 RWQRSTFPA----------------EL--RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVARN 220 (396)
T ss_pred HHHHhhCcH----------------hh--ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEECCC
Confidence 533333211 01 1468899999999988753211 01111111 36788999998
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChH--H-HHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC
Q 003145 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP--E-YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL 448 (844)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~--~-~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v 448 (844)
+.+.||+..+++|+..+.++.|+++ |+++|......+. + ...++++ ++.+++.+.+ ...|+ |.|.+
T Consensus 221 l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~---~~~V~-f~G~v 289 (396)
T cd03818 221 LEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH---MLDELGGRLD---LSRVH-FLGRV 289 (396)
T ss_pred cccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH---HHHHhhcccC---cceEE-EeCCC
Confidence 9999999999999999988888754 8888753211000 0 0011111 2222222111 12355 58999
Q ss_pred CHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 003145 449 DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 449 ~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
+.+++.++|+.||++++||..||+|++++|||||| .|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.++++
T Consensus 290 ~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~ 365 (396)
T cd03818 290 PYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLD 365 (396)
T ss_pred CHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999996 899999999988888 568999999999999999999998
Q ss_pred CCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003145 527 MSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (844)
Q Consensus 527 m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (844)
++ +++.++.+++++++.+ +++...+++++
T Consensus 366 ~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 366 DP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 65 5778888888998866 88888777765
No 32
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.92 E-value=1.5e-22 Score=240.48 Aligned_cols=331 Identities=14% Similarity=0.141 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-----------
Q 003145 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----------- 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~-~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r----------- 278 (844)
|.....+....++.+.... ...|+|+.|.+.--+++..++++. ++|.+++.|..=..--....+.|.
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 5555566666666555443 256999999887778888887764 688888788541100000001111
Q ss_pred -HHHHHhhhcCCEEEEecHHHHHHHHHHHH-----HHhCccc---CCCceeeCCeEEEEEEEecccChhHHhhhhcCCch
Q 003145 279 -SDLLRAVLAADLVGFHTYDYARHFVSACT-----RILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 349 (844)
Q Consensus 279 -~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~-----~~l~~~~---~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~ 349 (844)
..=+..|-.||.|.-.|+.-...-...+. ..+.++. .-+++.. ...++.++|+|+|++.|.+.......
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 00124566799998777532111000100 0011100 0011111 22478999999999999764321110
Q ss_pred H-HHH----------HHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCC---
Q 003145 350 Q-VHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 410 (844)
Q Consensus 350 ~-~~~----------~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~--- 410 (844)
. ... ...++.+ .++++|++|||+++.||+..+++||.++.+. +..+.|++||++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l----~~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKL----RELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhh----CCCeEEEEEeCCcccccc
Confidence 0 000 0112333 3678999999999999999999999876432 334678888864321
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHH----hCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 411 ~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~-v~~~el~aly~----~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
...+..+..+++.+++.+.+. .+ .|.+ .|. .+..++..+|+ .+||||+||.+||||||++||||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 111222334456666665432 11 3664 554 45666667776 2479999999999999999999996
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.++++ .+++.+.++.++++++| ++|+|...++++++..
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 678999999999999999999874 34556777777778876 7799999999988655
No 33
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.92 E-value=8.7e-23 Score=237.32 Aligned_cols=314 Identities=22% Similarity=0.253 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcC-----CCCeEEEEEecCCCCh----hhhhc--CCc--
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS-- 277 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~-----~~~~i~~flH~Pfp~~----e~~r~--lp~-- 277 (844)
...|...++...+.+.+.-...|+|++||+|-.++|.+++... .+.|++|+.|.+.+.. ..+.. +++
T Consensus 109 ~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~ 188 (476)
T cd03791 109 AERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE 188 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc
Confidence 3344445555555555444467999999999999999998763 5789999999874321 11111 111
Q ss_pred -----------c-HHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEEecccChhHHhhh
Q 003145 278 -----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 278 -----------r-~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~--~~g~~~~v~v~P~GID~~~f~~~ 343 (844)
. .-+..++..||.|...+..+++...+. .. ..+++ ...+..++.++|+|||.+.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~-------~~-~~gl~~~~~~~~~ki~~I~NGid~~~~~p~ 260 (476)
T cd03791 189 LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTP-------EF-GEGLDGLLRARAGKLSGILNGIDYDVWNPA 260 (476)
T ss_pred hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCC-------CC-CcchHHHHHhccCCeEEEeCCCcCcccCcc
Confidence 0 122334556777777666665554320 00 00110 11234578999999999988764
Q ss_pred hcCC-----------chHHHHHHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcC
Q 003145 344 LEIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 407 (844)
Q Consensus 344 ~~~~-----------~~~~~~~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p 407 (844)
.... ........+++++ .++++|+++||+.+.||+..+++|++.+.++. +.|+++|.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 334 (476)
T cd03791 261 TDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG 334 (476)
T ss_pred ccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC
Confidence 3211 0011223456665 36789999999999999999999999987642 558877753
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCC
Q 003145 408 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 487 (844)
Q Consensus 408 ~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~ 487 (844)
+ + .+++.+.+++.+.. ..+.++.+ .+.+++..+|+.||++++||..||||++.+|||+||
T Consensus 335 ---~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G---- 394 (476)
T cd03791 335 ---D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG---- 394 (476)
T ss_pred ---C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----
Confidence 1 2 23445555554421 13555444 457788899999999999999999999999999996
Q ss_pred ceEEEeCCCCchhhc--cC------CeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 003145 488 GVLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVS 557 (844)
Q Consensus 488 g~lVlSe~~G~~~~l--g~------~g~lvnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~ 557 (844)
.|+|+|..+|..+.+ +. +|++|+|.|+++++++|.+++++. ++.+.++.++..+ ..++|..-++++++
T Consensus 395 ~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 472 (476)
T cd03791 395 TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLE 472 (476)
T ss_pred CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 799999999999988 34 899999999999999999998643 3344444444332 45888888888876
Q ss_pred HHH
Q 003145 558 ELN 560 (844)
Q Consensus 558 ~l~ 560 (844)
.++
T Consensus 473 ~y~ 475 (476)
T cd03791 473 LYR 475 (476)
T ss_pred HHh
Confidence 553
No 34
>PLN00142 sucrose synthase
Probab=99.91 E-value=2.2e-22 Score=239.17 Aligned_cols=331 Identities=15% Similarity=0.127 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecC-----------CCChh-hhhcC-C
Q 003145 211 FAAYIKANQMFADVVNKHY-KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP-----------FPSSE-IHRTL-P 276 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~-~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~P-----------fp~~e-~~r~l-p 276 (844)
|..-.+++...++.+.... ..+|+|+-|++.--+++..|+++. ++|.+++.|.- |...+ .++.. .
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 6666666666666664433 356999999777778888887765 79999999942 11111 01100 0
Q ss_pred ccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCc-ccC-C------CceeeCCeEEEEEEEecccChhHHhhhhcCCc
Q 003145 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP 348 (844)
Q Consensus 277 ~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~-~~~-~------~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~ 348 (844)
...+ ...|..||.|.-.|+.-....-..+..+-.. ..+ + .++... .-++.++|+|+|...|.+......
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 0011 1244456665544432111000000000000 000 0 111111 227889999999999875321100
Q ss_pred --------hHHHH---HHHHHHh-----CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC-CC
Q 003145 349 --------VQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR-TD 411 (844)
Q Consensus 349 --------~~~~~---~~lr~~~-----~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r-~~ 411 (844)
..+.. ...++.+ .++++|++|||+++.||+..+|+||.++.+..+ ++.|++||.+.. ..
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~----~~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRE----LVNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCC----CcEEEEEECCccccc
Confidence 00000 0011222 256799999999999999999999998765544 356888886411 11
Q ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC---CCCCHHHHHHHHH-hCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 412 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 412 --~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~---~~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
..+..+..+++.+++.+.+.. + .|.++. +..+.++++.+|+ ++|+||+||.+||||+|++||||||
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 111111223455666554421 1 255432 2455678888777 5799999999999999999999996
Q ss_pred CCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHH
Q 003145 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 486 ~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 559 (844)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++. .+++.+.++.+++++++ ++|+|...++++++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 778999999999999999988753 35667777888888887 7799999999988744
No 35
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.91 E-value=2e-22 Score=233.70 Aligned_cols=279 Identities=18% Similarity=0.214 Sum_probs=200.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-H---HHHHhh-hcCCEEEEecHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRAV-LAADLVGFHTYDYARHFVSA 305 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~---~ll~~l-l~aDlIgf~t~~~~~~Fl~~ 305 (844)
+.|+|++|+...+.++.++-.+..++|+++.+|.-+|........++. + .+.+.+ ..+|.|...+....+.+...
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~ 223 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEAA 223 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHc
Confidence 469999998766655554433344788988888765432110011110 0 111222 25788887776655554321
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh----CCCcEEEEEecccccCCHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VdRld~~KGi~~~ 381 (844)
+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++||+.+.||+..+
T Consensus 224 -----~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 224 -----GV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred -----CC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 10 013468899999999988754221 1233333 367899999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++++ |+ +.|+++|. ++.. +++++++.. .+|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~~----~~l~~~~~~----------~~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPYR----EELEKMFAG----------TPTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChHH----HHHHHHhcc----------CCeE-EeccCCHHHHHHHHHHCC
Confidence 9988753 54 45888863 3433 334444332 1366 489999999999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
+||+||..||||++++|||||| .|+|+|..+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999996 899999999988877 3579999999999999999999985 45777788
Q ss_pred HHHHHHHHhcCHHHHHHHHHH-HHHHhHH
Q 003145 537 WHNFTHVTTHTAQEWAETFVS-ELNDTVV 564 (844)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~-~l~~~~~ 564 (844)
+++++++++|+|...++.++. .+..+..
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~ 437 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAAIW 437 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999987 4655543
No 36
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.91 E-value=5.7e-22 Score=225.31 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=196.8
Q ss_pred CCCEEEEeCccchhH-HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~ll-p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|+++.... ...+-.+..++|+++..|..|+..+.... +...+.+. +-.+|.|.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999775443 33333344568999999987653322110 11222222 346888888887655443221
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
......++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 ------------~~~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 ------------ASLDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred ------------hCCChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 01123578899999999988653110 124678999999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
.+++|++ .|+++|. ++....+ ++++.+.+. .+ .|. +.|.++.+++..+|+.||++++||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~~~l----~~~~~~~~l----~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKRILL----EEMREKYNL----QD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchHHHH----HHHHHHhCC----CC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888864 4877764 2333333 344443321 11 255 4799999999999999999999999
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCC-eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~-g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 546 (844)
.||||++++|||||| .|+|+|..+|..+.+..+ +++++ .|.++++++|.+++.++.+ +..+..++++. .+++
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~-~~~~~l~~~l~~~l~~~~~-~~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAE-PDVESIVRKLEEAISILRT-GKHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecC-CCHHHHHHHHHHHHhChhh-hhhHHHHHHHHHHhhC
Confidence 999999999999996 899999999998888433 44554 4999999999999987543 33444555554 4779
Q ss_pred CHHHHHHHHHHHHHHhH
Q 003145 547 TAQEWAETFVSELNDTV 563 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~~~ 563 (844)
++..-++++++.++.+.
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999998888764
No 37
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.90 E-value=8e-22 Score=222.27 Aligned_cols=287 Identities=22% Similarity=0.206 Sum_probs=205.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhh-----hcCCccHHH-HHhhhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIH-----RTLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~-----r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..|+|++|++...+.+.++++ ..+.|+++.+|..+|..... ........+ ...+..+|.|...+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 479999999887766665544 45788999999866532110 000111111 22344678888877765555433
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
. .-+ -...++.++|+|+|++.|.+.. ...++.++ .++++|+++||+.+.||+..+
T Consensus 162 ~---~~~-----------~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPD-----------LDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCC-----------CCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 001 1234788999999998876421 11234444 356799999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++++. ++ +.|+++|.+. +.+ ++.+++++++..++... ..++++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~~---~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DTP---EVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--CcH---HHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 23 3466665432 112 33445555554443221 13777788999999999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH------HHHHHHHHHHhcCCHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 533 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~------~~~A~ai~~aL~m~~~er~ 533 (844)
++|+||..||||++++|||+|| .|+|+|..+|..+.+ +.+|++++|.|. ++++++|.++++. ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999996 899999999988887 567999999998 9999999999985 55777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003145 534 KRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (844)
++..++++.+ ++++|+.+++++++.++++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 7777787776 6799999999998877653
No 38
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.90 E-value=1.2e-21 Score=220.71 Aligned_cols=295 Identities=20% Similarity=0.228 Sum_probs=207.3
Q ss_pred HHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-----C-ccHHH-HHhhhcCCEEEEec
Q 003145 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-----P-SRSDL-LRAVLAADLVGFHT 295 (844)
Q Consensus 223 ~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-----p-~r~~l-l~~ll~aDlIgf~t 295 (844)
..+.+.....|+|++|++....++..+.+. .++|+.++.|............ + .+..+ ...+..+|.|.+.+
T Consensus 93 ~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s 171 (398)
T cd03800 93 RFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIAST 171 (398)
T ss_pred HHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcC
Confidence 334443336799999998777766666544 4788888899754321100000 0 01111 22345789999888
Q ss_pred HHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccccc
Q 003145 296 YDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 375 (844)
Q Consensus 296 ~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~ 375 (844)
......+... . .....++.++|+|+|.+.|.+..... .....+. ...++++|+++||+++.
T Consensus 172 ~~~~~~~~~~----~-----------~~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~~-~~~~~~~i~~~gr~~~~ 232 (398)
T cd03800 172 PQEAEELYSL----Y-----------GAYPRRIRVVPPGVDLERFTPYGRAE---ARRARLL-RDPDKPRILAVGRLDPR 232 (398)
T ss_pred HHHHHHHHHH----c-----------cccccccEEECCCCCccceecccchh---hHHHhhc-cCCCCcEEEEEcccccc
Confidence 7665554331 1 11223488999999998876532111 1111111 11467899999999999
Q ss_pred CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHH
Q 003145 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (844)
Q Consensus 376 KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~a 455 (844)
||+..+++|+..+.++.|++ .|+++|.+.....+ ....++++++.+.+.. ..+. +.|.++.+++..
T Consensus 233 k~~~~ll~a~~~l~~~~~~~----~l~i~G~~~~~~~~---~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~ 298 (398)
T cd03800 233 KGIDTLIRAYAELPELRERA----NLVIVGGPRDDILA---MDEEELRELARELGVI------DRVD-FPGRVSREDLPA 298 (398)
T ss_pred cCHHHHHHHHHHHHHhCCCe----EEEEEECCCCcchh---hhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHH
Confidence 99999999999998877664 58888764432211 2223345555443321 1244 589999999999
Q ss_pred HHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 003145 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEERE 533 (844)
Q Consensus 456 ly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~ 533 (844)
+|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++++.
T Consensus 299 ~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~ 373 (398)
T cd03800 299 LYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRR 373 (398)
T ss_pred HHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999999996 799999999988888 4579999999999999999999986 45777
Q ss_pred HHHHHHHHHH-HhcCHHHHHHHHH
Q 003145 534 KRHWHNFTHV-TTHTAQEWAETFV 556 (844)
Q Consensus 534 ~r~~~~~~~v-~~~~~~~W~~~fl 556 (844)
++..++++++ +.++++..++.++
T Consensus 374 ~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 374 RLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHh
Confidence 7778888887 8899999998875
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.90 E-value=4.4e-23 Score=221.40 Aligned_cols=201 Identities=16% Similarity=0.231 Sum_probs=136.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liae 667 (844)
..|+|++|+||||++. +..++++++++|+++.+ +|..|+|+|||+...+.+++..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999987 34599999999999987 6999999999999999999999954 69999
Q ss_pred cceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--CCCceEeeccce------------EE-----EEeecC---
Q 003145 668 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETS------------LV-----WNYKYA--- 725 (844)
Q Consensus 668 nG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--t~gs~iE~k~~s------------l~-----~hy~~~--- 725 (844)
||+++...++. +.....+ .+.+..+++..... .+..+....... .. +.....
T Consensus 67 NGa~i~~~~~~---i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGEL---LFQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcE---EeeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 99999975322 2222334 34455555444222 111111110000 00 000000
Q ss_pred Ch------hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCc-EEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 726 DV------EFGRIQARDMLQHLWTGPISNASVEVVQGSK-SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 726 d~------e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~-~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+. +.......++.+.+ ...+....+.+.++.. ++||.|+|+|||.|++.|+++++ ++.++||||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 00 00011223333444 3333333455666544 49999999999999999999999 77899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcc
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
+.|| ||+ |++|+||||.+++
T Consensus 214 -~~ND~~Ml~~ag~gvam~Na~~~~ 237 (264)
T COG0561 214 -STNDIEMLEVAGLGVAMGNADEEL 237 (264)
T ss_pred -ccccHHHHHhcCeeeeccCCCHHH
Confidence 9999 999 9999999996643
No 40
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.90 E-value=3.7e-22 Score=231.98 Aligned_cols=283 Identities=20% Similarity=0.172 Sum_probs=198.7
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh---hhhhc---CCccHH--------HHH-hhhcCC
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRSD--------LLR-AVLAAD 289 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~---e~~r~---lp~r~~--------ll~-~ll~aD 289 (844)
+...+.+.|+|++|......++..+..+..+.|+.++.|--++.. +++.. .+..+. +.+ .+..||
T Consensus 167 l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad 246 (475)
T cd03813 167 IARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAAD 246 (475)
T ss_pred hccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444456789999998665555555544456899999999765532 22211 000011 111 123466
Q ss_pred EEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEE
Q 003145 290 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 369 (844)
Q Consensus 290 lIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 369 (844)
.|...+....+... .++....++.++|+|||.+.|.+.... ....++++|+++
T Consensus 247 ~Ii~~s~~~~~~~~----------------~~g~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~v 299 (475)
T cd03813 247 RITTLYEGNRERQI----------------EDGADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLI 299 (475)
T ss_pred EEEecCHHHHHHHH----------------HcCCCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEE
Confidence 66655443222111 112233578899999999988653210 112467899999
Q ss_pred ecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC
Q 003145 370 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 449 (844)
Q Consensus 370 dRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~ 449 (844)
||+.+.||+..+|+|++.+.++.|++ .|+++|.+. .+ + ++.+++++++++.+.. ..|.| .|
T Consensus 300 Grl~~~Kg~~~li~a~~~l~~~~p~~----~l~IvG~g~-~~-~---~~~~e~~~li~~l~l~------~~V~f-~G--- 360 (475)
T cd03813 300 GRVVPIKDIKTFIRAAAIVRKKIPDA----EGWVIGPTD-ED-P---EYAEECRELVESLGLE------DNVKF-TG--- 360 (475)
T ss_pred eccccccCHHHHHHHHHHHHHhCCCe----EEEEECCCC-cC-h---HHHHHHHHHHHHhCCC------CeEEE-cC---
Confidence 99999999999999999998888864 488776432 11 2 3445666666665532 13554 66
Q ss_pred HHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccC--------CeEEECCCCHHHHHHHH
Q 003145 450 FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANAI 521 (844)
Q Consensus 450 ~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~--------~g~lvnP~d~~~~A~ai 521 (844)
.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|+.+.+.. +|++++|.|++++|++|
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai 436 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHH
Confidence 6789999999999999999999999999999996 79999999998887733 79999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHH
Q 003145 522 ARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSE 558 (844)
Q Consensus 522 ~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~ 558 (844)
.+++++ ++.+.++.+++++++++ ++++..++++.+.
T Consensus 437 ~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~l 473 (475)
T cd03813 437 LRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRRL 473 (475)
T ss_pred HHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999985 45777788888888755 5878888877654
No 41
>PLN02949 transferase, transferring glycosyl groups
Probab=99.90 E-value=1.8e-21 Score=224.14 Aligned_cols=316 Identities=16% Similarity=0.172 Sum_probs=211.6
Q ss_pred hhhhhccccccCCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEeCcc-chhHHHHHHhcCCCCeE
Q 003145 180 GYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYH-LMFLPKCLKEYNSDMKV 258 (844)
Q Consensus 180 ~f~n~~LWp~fH~~~~~~~~~~~~~~~~~~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyh-l~llp~~lr~~~~~~~i 258 (844)
.+-..-+||-||.+. ......|-+++.+.+ +. |.|||---- .+-+| ++| ...+||
T Consensus 108 ~~~~~~~~~~~t~~~----------~~~~~~~l~~~~~~~---------~~--p~v~vDt~~~~~~~p-l~~--~~~~~v 163 (463)
T PLN02949 108 KWIEEETYPRFTMIG----------QSLGSVYLAWEALCK---------FT--PLYFFDTSGYAFTYP-LAR--LFGCKV 163 (463)
T ss_pred cccccccCCceehHH----------HHHHHHHHHHHHHHh---------cC--CCEEEeCCCcccHHH-HHH--hcCCcE
Confidence 344566688887652 123334555554433 12 357774321 12223 233 237899
Q ss_pred EEEEecCCCChhhhhcCCcc-------------------HHH-------HH--hhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 259 GWFLHTPFPSSEIHRTLPSR-------------------SDL-------LR--AVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 259 ~~flH~Pfp~~e~~r~lp~r-------------------~~l-------l~--~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
++.+|.|.-+.++...+-.+ +.+ +. .+-.+|.|...+.-..+++.+ ..
T Consensus 164 ~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~ 239 (463)
T PLN02949 164 VCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW 239 (463)
T ss_pred EEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc
Confidence 99999987776554432100 000 11 123567776655433333321 11
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+...++.++++|+|.+.|... +. ....+++++++|||+.+.||+..+|+||.++++
T Consensus 240 ------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~ 295 (463)
T PLN02949 240 ------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALALE 295 (463)
T ss_pred ------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHH
Confidence 112357789999998776321 10 011356789999999999999999999999887
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
+.++-..++.|+++|... . ++..++.+++++++.+.+.. + .|.| .+.++.+++.++|+.||+++.||..|
T Consensus 296 ~~~~~~~~~~LvIvG~~~-~--~~~~~~~~eL~~la~~l~L~----~--~V~f-~g~v~~~el~~ll~~a~~~v~~s~~E 365 (463)
T PLN02949 296 KLDADVPRPKLQFVGSCR-N--KEDEERLQKLKDRAKELGLD----G--DVEF-HKNVSYRDLVRLLGGAVAGLHSMIDE 365 (463)
T ss_pred hccccCCCcEEEEEeCCC-C--cccHHHHHHHHHHHHHcCCC----C--cEEE-eCCCCHHHHHHHHHhCcEEEeCCccC
Confidence 544322246698888642 1 11123344555666554321 1 2664 79999999999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l-----g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
|||++++|||||| .|+|+|..+|..+ .+ |.+|++++ |++++|++|.++++++++++.++.+++++.++
T Consensus 366 ~FGivvlEAMA~G----~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 366 HFGISVVEYMAAG----AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred CCChHHHHHHHcC----CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999999999995 7899999888753 33 34688874 99999999999999888888888899999999
Q ss_pred hcCHHHHHHHHHHHHHHhH
Q 003145 545 THTAQEWAETFVSELNDTV 563 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l~~~~ 563 (844)
+|+++.-++++++.++...
T Consensus 440 ~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 440 RFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred HcCHHHHHHHHHHHHHHHH
Confidence 9999999999988887654
No 42
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.90 E-value=1.9e-21 Score=218.49 Aligned_cols=231 Identities=16% Similarity=0.175 Sum_probs=173.0
Q ss_pred CCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcE
Q 003145 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKV 365 (844)
Q Consensus 288 aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~v 365 (844)
+|.+...+....+.+.. .++ ....++.++|+|||.+.|.+..... ....+..+ .++.+
T Consensus 137 ~~~~i~vs~~~~~~~~~----~~~-----------~~~~~~~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 196 (374)
T TIGR03088 137 IHHYVAVSRDLEDWLRG----PVK-----------VPPAKIHQIYNGVDTERFHPSRGDR-----SPILPPDFFADESVV 196 (374)
T ss_pred CCeEEEeCHHHHHHHHH----hcC-----------CChhhEEEeccCccccccCCCccch-----hhhhHhhcCCCCCeE
Confidence 57777777655554432 111 1235678899999998886432111 11112222 35779
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~ 445 (844)
|+++||+++.||+..+++|+..++++.|+...++.|+++|. ++..+ ++++++.+.+. ...++|.
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~~----~~~~~~~~~~~-------~~~v~~~ 260 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPARG----ACEQMVRAAGL-------AHLVWLP 260 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchHH----HHHHHHHHcCC-------cceEEEc
Confidence 99999999999999999999999999887655688998874 23222 33344433322 2344456
Q ss_pred CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHH
Q 003145 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIAR 523 (844)
Q Consensus 446 ~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~ 523 (844)
|. .+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.+
T Consensus 261 g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~ 334 (374)
T TIGR03088 261 GE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQP 334 (374)
T ss_pred CC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHH
Confidence 64 5789999999999999999999999999999996 899999999999888 567999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 524 ALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 524 aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
++++ ++.+.++.+++++++ +.|++...++++++.++.
T Consensus 335 l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 335 YVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9985 456777778888886 689999999988877664
No 43
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.90 E-value=8.4e-22 Score=225.36 Aligned_cols=274 Identities=18% Similarity=0.184 Sum_probs=186.0
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-------------CccH--HH-----------H--H
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------L--R 283 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-------------p~r~--~l-----------l--~ 283 (844)
+|+|..|--+...+ .+.+..+++|+++.+|.|.-+++.+..+ ..+. .+ + .
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 58665553233323 3444556889999999664455554322 1111 01 1 1
Q ss_pred hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCC
Q 003145 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 363 (844)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 363 (844)
.+-.||.|...+.....++.+ .. +...++.++|+|+|.+.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~------------~~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LW------------KRNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----Hh------------CcCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 233577777666533333322 11 11136789999999988754211 011356
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
++|+++||+.+.||+..+|+||..+.+..|+.. .++.|+++|.+.... ..++.+++++++.+.+.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~---~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNED---DEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcc---cHHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998887521 247788887532111 123445666666654431 1255
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh-hc-----cCCeEEECCCCHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 516 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l-----g~~g~lvnP~d~~~ 516 (844)
|.+.++.+++..+|+.||++++||..||||++++|||||| .|+|+|..+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5789999999999999999999999999999999999996 7899998878654 34 45799974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHH
Q 003145 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQEW 551 (844)
Q Consensus 517 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W 551 (844)
+|++|.++++++++++..+.++.++..++|++...
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~f 416 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHHh
Confidence 99999999999877766655555555677777654
No 44
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.89 E-value=1.4e-22 Score=218.38 Aligned_cols=217 Identities=15% Similarity=0.175 Sum_probs=141.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 589999999999976 35689999999999988 699999999999999999998884 4689999
Q ss_pred ceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcC--------CCceEeeccce-------EEEEeecCCh----
Q 003145 669 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-------LVWNYKYADV---- 727 (844)
Q Consensus 669 G~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt--------~gs~iE~k~~s-------l~~hy~~~d~---- 727 (844)
|+.+.. .++. +.. ..+. +.+.++++...... .+.+....... ..+.+...+.
T Consensus 67 Ga~I~~~~~~~l~~~----~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQ----DLPA---DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEee----cCCH---HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999985 3332 222 2332 33444443322110 01111000000 0000000000
Q ss_pred --h------h-hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 728 --E------F-GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 728 --e------~-~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
. + ......++.+.+ ...+. ..+.+. ++..++||.|+++|||.|++.|++++| ++.++++|||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 0 0 011123333444 22222 234544 456799999999999999999999999 8899999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCH--HHHHHHHHHHh
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKV--HQLFGIFLRFS 838 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~--~~v~~~l~~~~ 838 (844)
| +.|| ||+ ++|||||||.+++.+. ...+. +-|..+|+++.
T Consensus 212 D-~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 212 D-AMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred C-CHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHh
Confidence 9 9999 999 9999999998876443 22232 23666776654
No 45
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.89 E-value=8.6e-23 Score=210.50 Aligned_cols=194 Identities=22% Similarity=0.361 Sum_probs=146.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEE
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 672 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i 672 (844)
||++|+||||++.. ..+++++++++|++|+++ |+.|+|+|||+...+..+++.++.++|++||+++
T Consensus 1 li~~D~DgTL~~~~-------------~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDPN-------------AHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 68999999999862 245889999999999985 7999999999999999999988889999999999
Q ss_pred EecCC-eeeecccccCChHH---HHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCC-
Q 003145 673 RCTTG-KWMTTMPEHLNMEW---VDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 747 (844)
Q Consensus 673 ~~~~~-~w~~~~~~~~~~~w---~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~- 747 (844)
+..++ .|.. +......| .+.+..+++.+....++..+|.+...+.++|+.... ......++...+ +....
T Consensus 67 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHH-Hhhccc
Confidence 86433 3442 11111112 233344555566677888888899999999987511 111223444444 33221
Q ss_pred CCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEE
Q 003145 748 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQV 812 (844)
Q Consensus 748 ~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iav 812 (844)
...+.++ ++..++||+|++++||.|++.++++++ ++.+++++||| +.|| ||+ +++|+|
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGLAVAV 204 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCCceEC
Confidence 2457777 689999999999999999999999998 67899999999 9999 898 788887
No 46
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=3.5e-21 Score=214.93 Aligned_cols=275 Identities=16% Similarity=0.123 Sum_probs=194.5
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCC--hhhhhcCCc--cHHHHHh-hhcCCEEEEecHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLRA-VLAADLVGFHTYDYA 299 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~--~e~~r~lp~--r~~ll~~-ll~aDlIgf~t~~~~ 299 (844)
+.+..+ .|+|++|+....+....+.+ ..++|+.+.+|..... .....+.++ ...+.+. +..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 344444 49999997664444333333 3468888888853211 111111111 1222222 345788888776544
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+.+... + ....++.++|+|+|.+.|.+... ..++++++++||+.+.||+.
T Consensus 155 ~~~~~~-----~-----------~~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLAL-----G-----------FPPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHHc-----C-----------CCHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 444321 1 12346889999999988764211 12467899999999999999
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
.+++|+..+.+++|++ .|+++|. ++.. +++++++++.+.. ..|. +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~~----~l~ivG~-----g~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPEV----RLVIIGD-----GPLL----AALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCCe----EEEEEeC-----chHH----HHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 9999999998887764 5888863 2322 3444454443211 1254 5899999999999999
Q ss_pred CcEEEEcCC------CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 003145 460 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (844)
Q Consensus 460 ADv~v~~S~------~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~e 531 (844)
||++++||. .||||++++|||||| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++ ++.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLAD-PDL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcC-HHH
Confidence 999999997 599999999999996 899999999988877 5679999999999999999999985 446
Q ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHH
Q 003145 532 REKRHWHNFTHV-TTHTAQEWAETFV 556 (844)
Q Consensus 532 r~~r~~~~~~~v-~~~~~~~W~~~fl 556 (844)
+.++..++++++ +.++|+.+++.+.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777777888887 6799999988765
No 47
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.89 E-value=6.7e-21 Score=211.22 Aligned_cols=281 Identities=20% Similarity=0.257 Sum_probs=198.1
Q ss_pred HhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhh-hcCCEEEEecHHHHHHHHH
Q 003145 226 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-LAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 226 ~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~l-l~aDlIgf~t~~~~~~Fl~ 304 (844)
.+..+ .|+|++|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.|..
T Consensus 75 ~~~~~-pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQFK-PDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhcC-CCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 33344 5899999999888888887777778888888864322111 11111111 1234444445444444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
.. .-...++.++|+|+|...|.+.. .....+++.+ .++++++++||+.+.||+..+
T Consensus 148 ~~---------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 SK---------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred cc---------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 10 01234688999999998875421 1223455554 367899999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.+++|++ .|+++|. ++...+ +.+.+.+.+.. ..|.+ .|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~~----~l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLDI----KLLIAGD-----GPLRAT----LERLIKALGLS------NRVKL-LGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCCe----EEEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEE-eccc--ccHHHHHHhhc
Confidence 99999998888764 4887764 232223 33333333321 12554 5653 68899999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++++||..||||++++|||||| .|+|+|+.+|..+.+..+|++++|.|+++++++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999996 799999999988888668999999999999999999998777777666665333
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 003145 542 HVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l~ 560 (844)
..+.++++.+++.+++-+.
T Consensus 341 ~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 341 IVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHhcCHHHHHHHHHHHhh
Confidence 4588999999999887653
No 48
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.89 E-value=7.6e-21 Score=217.04 Aligned_cols=289 Identities=10% Similarity=0.003 Sum_probs=189.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeE-EEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i-~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+|+.|++...+++.+..... .+|+ +...|. +++...-+.+- ++ ...+..++++.-.+. ++.+.....+.+
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~-~e--~~~~~~a~~i~~~sd-~v~~s~~v~~~l 353 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFK-PE--YEPLYQALAVVPGVD-FMSNNHCVTRHY 353 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHH-HH--HHHhhhhceeEecch-hhhccHHHHHHH
Confidence 45999999999877776666554 3444 555675 33211001000 00 112334444433222 332222211211
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
.. .+.....++.++|+|||++.|.+....+ ......++..+ .+.++|++|+|+.+.||...+|+|+.++
T Consensus 354 ~~--------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~l 423 (578)
T PRK15490 354 AD--------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDFAARY 423 (578)
T ss_pred HH--------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHHHHHH
Confidence 10 0112346799999999999887642111 11111222223 3457888999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
+++.|++ .|+++|. ++.. +++++++.+.+.. ..|+| .|. .+++..+|+.||+||+||.
T Consensus 424 lk~~pdi----rLvIVGd-----G~~~----eeLk~la~elgL~------d~V~F-lG~--~~Dv~~~LaaADVfVlPS~ 481 (578)
T PRK15490 424 LQHHPAT----RFVLVGD-----GDLR----AEAQKRAEQLGIL------ERILF-VGA--SRDVGYWLQKMNVFILFSR 481 (578)
T ss_pred HhHCCCe----EEEEEeC-----chhH----HHHHHHHHHcCCC------CcEEE-CCC--hhhHHHHHHhCCEEEEccc
Confidence 9888864 4888864 3333 3444455443321 13554 666 4689999999999999999
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHH-
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHV- 543 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~v- 543 (844)
+||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|++++++++..+..+. .+.+..+.+++++++
T Consensus 482 ~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~ 557 (578)
T PRK15490 482 YEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQ 557 (578)
T ss_pred ccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999996 899999999999887 78899999999999998874433221 223445667778877
Q ss_pred HhcCHHHHHHHHHHHHHH
Q 003145 544 TTHTAQEWAETFVSELND 561 (844)
Q Consensus 544 ~~~~~~~W~~~fl~~l~~ 561 (844)
+.|++..-++.+++.++.
T Consensus 558 e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 558 ERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred hhCCHHHHHHHHHHHHHh
Confidence 669999999999887764
No 49
>PRK10976 putative hydrolase; Provisional
Probab=99.89 E-value=3.9e-22 Score=214.26 Aligned_cols=219 Identities=15% Similarity=0.186 Sum_probs=140.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 589999999999986 34689999999999997 699999999999999999988874 4689999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhc--------CC-CceEeeccc---------eEEEEeec---CCh
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--------TP-RSHFEQRET---------SLVWNYKY---ADV 727 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~-gs~iE~k~~---------sl~~hy~~---~d~ 727 (844)
|+++...++.. +.....+ .+.+.++++...+. .. +.++..... ...+.... ...
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEP 141 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhccc
Confidence 99998532321 1112233 23344444433211 01 111110000 00000000 000
Q ss_pred -hh--------hHHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEe
Q 003145 728 -EF--------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 797 (844)
Q Consensus 728 -e~--------~~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiG 797 (844)
++ ......++.+.+ ...+. ..+.+. ++..++||.|+++|||.|++.|++++| +++++++|||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viafG 213 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAFG 213 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEEc
Confidence 00 001112233333 22121 234543 467899999999999999999999999 7899999999
Q ss_pred eCCCch--hhc--cCcEEEeCCCCcchhh----h-cCCHH--HHHHHHHHHh
Q 003145 798 HFLGKV--LLT--QFLIQVGSSINSLSKE----K-KRKVH--QLFGIFLRFS 838 (844)
Q Consensus 798 D~~~nD--Mf~--g~~Iavgna~~~~a~~----~-l~~~~--~v~~~l~~~~ 838 (844)
| +.|| ||+ |++||||||.+++.+. . ..+.+ -|..+|+++.
T Consensus 214 D-~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 214 D-GMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred C-CcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 9 9999 999 9999999998865443 2 23322 2556666553
No 50
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.88 E-value=1e-20 Score=213.65 Aligned_cols=283 Identities=17% Similarity=0.159 Sum_probs=189.8
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHH---------hhhcCCEEEEecHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR---------AVLAADLVGFHTYDYAR 300 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~---------~ll~aDlIgf~t~~~~~ 300 (844)
...|+|++|+.... ++ +++... ..++.+.+|.| .......-.+.+.+.+ .+-.+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~-~~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSAC-VP-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchH-HH-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 46799999886643 22 233333 38899999954 2211111111111111 13347777776654333
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHH
Q 003145 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 380 (844)
Q Consensus 301 ~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~ 380 (844)
.+.. .++. .....+.++|+|||.+.|.+..... .........+..+|+++||+.+.||+..
T Consensus 168 ~~~~----~~~~----------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPS----------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhcc----------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 1110 0112245889999999886532111 0011112256789999999999999999
Q ss_pred HHHHHHHHHHhC---cCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHH-hhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 381 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 381 ~l~Af~~ll~~~---P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~-IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
+|+|++++.++. |+ +.|+++|.+... .++..++.+++++++.+ .+.. ..|. |.|.++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998876 54 558888754321 12222344555555554 3221 1355 4899999999999
Q ss_pred HHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 003145 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 534 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~ 534 (844)
|+.||++++||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++.+. .+.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHH
Confidence 999999999999999999999999996 899999999988877 457999977 99999999999998764 6677
Q ss_pred HHHHHHHHH-HhcCHHHHHHH
Q 003145 535 RHWHNFTHV-TTHTAQEWAET 554 (844)
Q Consensus 535 r~~~~~~~v-~~~~~~~W~~~ 554 (844)
+.+++++++ ..++++..+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 778888876 66898887765
No 51
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.88 E-value=1e-21 Score=211.41 Aligned_cols=217 Identities=14% Similarity=0.226 Sum_probs=139.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc-----eE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l-----~l 664 (844)
+.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.+.++.+++ ++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~ 66 (270)
T PRK10513 2 AIKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYC 66 (270)
T ss_pred ceEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeE
Confidence 3689999999999986 35689999999999988 6999999999999999999988753 58
Q ss_pred EeecceEEEe--cCCe-eeecccccCChHHHHHHHHHHHHHHhc--------CCCceEeeccce-----------EEEEe
Q 003145 665 AAENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTER--------TPRSHFEQRETS-----------LVWNY 722 (844)
Q Consensus 665 iaenG~~i~~--~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~r--------t~gs~iE~k~~s-----------l~~hy 722 (844)
|++||+++.. .++. +... .+.+ .+..+++...+. ..+.+...+... +...+
T Consensus 67 I~~NGa~i~~~~~~~~i~~~~----l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (270)
T PRK10513 67 ITNNGALVQKAADGETVAQTA----LSYD---DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVF 139 (270)
T ss_pred EEcCCeEEEECCCCCEEEecC----CCHH---HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccc
Confidence 9999999985 2332 3222 3322 233333322211 011111111100 00000
Q ss_pred ecC---Ch--hh------h-HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCC
Q 003145 723 KYA---DV--EF------G-RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 789 (844)
Q Consensus 723 ~~~---d~--e~------~-~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~ 789 (844)
... ++ .+ . .....++.+.+ ...+. ..+.++ ++..++||.|+|+|||.|++.|++++| ++
T Consensus 140 ~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~ 211 (270)
T PRK10513 140 REVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IK 211 (270)
T ss_pred cchhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CC
Confidence 000 00 00 0 11122333333 21111 234544 467899999999999999999999999 78
Q ss_pred CceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCH--HHHHHHHHHH
Q 003145 790 IDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKV--HQLFGIFLRF 837 (844)
Q Consensus 790 ~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~--~~v~~~l~~~ 837 (844)
.++++|||| +.|| ||+ |++||||||.+++ |++...+. +-|..+|+++
T Consensus 212 ~~~v~afGD-~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~ 267 (270)
T PRK10513 212 PEEVMAIGD-QENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKY 267 (270)
T ss_pred HHHEEEECC-chhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHH
Confidence 999999999 9999 999 9999999998764 33333332 2355566554
No 52
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.88 E-value=3e-20 Score=207.68 Aligned_cols=277 Identities=16% Similarity=0.163 Sum_probs=194.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcC---CCCeEEEEEecCCCChhhhhcCCccHHH-HHhhhcCCEEEEecHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSAC 306 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~---~~~~i~~flH~Pfp~~e~~r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (844)
..|+|++|.+....++..+..+. .+.++.+.+|..-.. ....-+....+ ...+..+|.|...+......+.+.
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~- 160 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYEL- 160 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHHh-
Confidence 46999999876555555544322 267888888853111 11111222222 334557899998888766555431
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHH
Q 003145 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 307 ~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~ 383 (844)
. +...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 161 ---~------------~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 161 ---F------------DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred ---c------------CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 1 11236889999999887754211 1223333 36789999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.++ ++ +.|+++|.+ ++...++ +++.+.+.. ..|.+ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~~~~~----~~~~~~~~~------~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PERSPAE----RLARELGLQ------DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCHHHHH----HHHHHcCCC------ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 32 447777643 2222333 333333211 12554 5654 5799999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++||..||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.+++++ ++.+.++.+++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 99999999999999999996 899999999998887 5689999999999999999999985 4567777777887
Q ss_pred H-HHhcCHHHHHHHHHHHHHH
Q 003145 542 H-VTTHTAQEWAETFVSELND 561 (844)
Q Consensus 542 ~-v~~~~~~~W~~~fl~~l~~ 561 (844)
. ...|++...++.+++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5789999999988877654
No 53
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.88 E-value=1.1e-20 Score=224.96 Aligned_cols=280 Identities=14% Similarity=0.093 Sum_probs=185.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEE-EEecCCCC---hhhhhcCCccHHHHHhhhcCCEEEEec--HHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFHT--YDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~-flH~Pfp~---~e~~r~lp~r~~ll~~ll~aDlIgf~t--~~~~~~Fl~ 304 (844)
..|||++|.+.-.++..+..+.. .+|+.+ .+|+ +|. .+.++. ....+...+..++.+.+.+ ....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 45999999988877777666543 456544 5564 221 121110 0111223333334333322 222222221
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC-CCcEEEEEecccccCCHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VdRld~~KGi~~~l~ 383 (844)
.++ ....+|.++|+|||++.|.+. +...+....++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g-----------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLG-----------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcC-----------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 111 224578999999999888532 111111112222222 4668899999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
||..+++++|++ .|+++|.+ +. ++++++++.+.+.. ..|+ |.|.. +++..+|+.||+|
T Consensus 538 A~a~l~~~~p~~----~LvIvG~G-----~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKV----RFIMVGGG-----PL----LESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCe----EEEEEccC-----cc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEE
Confidence 999999998875 48888742 32 23455555554321 1254 57775 4799999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~--~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
|+||.+||||++++|||||| .|+|+|..+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999996 899999999988888 568999998875 689999999887543 223445567
Q ss_pred HHHH-HhcCHHHHHHHHHHHH
Q 003145 540 FTHV-TTHTAQEWAETFVSEL 559 (844)
Q Consensus 540 ~~~v-~~~~~~~W~~~fl~~l 559 (844)
++++ ++|++..-++.+++.+
T Consensus 671 r~~a~~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRCY 691 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHHh
Confidence 7776 5899999888887654
No 54
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.87 E-value=2.2e-20 Score=213.17 Aligned_cols=285 Identities=15% Similarity=0.125 Sum_probs=198.2
Q ss_pred CCCCEEEEeCccchhH--HHHHHhcCCCCeEEEEEecCCCChhhhhc-CC--cc----HHHHHh-hhcCCEEEEecHHHH
Q 003145 230 KDGDVVWCHDYHLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRT-LP--SR----SDLLRA-VLAADLVGFHTYDYA 299 (844)
Q Consensus 230 ~~~DiVwvHDyhl~ll--p~~lr~~~~~~~i~~flH~Pfp~~e~~r~-lp--~r----~~ll~~-ll~aDlIgf~t~~~~ 299 (844)
.+.|+||+|...+... ...+++ ..+.|+.+..|--||..-.-.. .+ .. ..+.+. +-.+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 3569999998665432 223333 3456777777765553211001 10 00 111222 235888888887666
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccC
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 376 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~K 376 (844)
+.+.. .+ ....++.++|+|||.+.|.+... + ....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~-----------~~~~~i~vi~ngvd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KG-----------VAAEKVIFFPNWSEVARFQPVAD-A----DVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cC-----------CCcccEEEECCCcCHhhcCCCCc-c----chHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 55432 11 12357889999999998865321 1 122355555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
|+..+++|++++ +++|+ +.|+++|. ++.. +++++++.+.+. ..|.| .|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~----~~l~~~~~~~~l-------~~v~f-~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGK----ARLEKMAQCRGL-------PNVHF-LPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhH----HHHHHHHHHcCC-------CceEE-eCCCCHHHHHHH
Confidence 999999999876 44554 56887863 3333 334444443332 13664 789999999999
Q ss_pred HHhCcEEEEcCCCcCCCh----hHhhhhhcccCCCceEEEeCCCCc--hhhccCCeEEECCCCHHHHHHHHHHHhcCCHH
Q 003145 457 YAVTDVALVTSLRDGMNL----VSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 530 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~L----v~~Eama~~~~~~g~lVlSe~~G~--~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~ 530 (844)
|+.||++++||..|++++ ..+|||||| .|+|+|..+|. .+.+..+|++++|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 999999999999999554 469999996 78999988774 355556899999999999999999998764 5
Q ss_pred HHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHhH
Q 003145 531 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 563 (844)
Q Consensus 531 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 563 (844)
++..+.+++++++. .||+...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77788888888875 6999999999999888654
No 55
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.87 E-value=2.3e-21 Score=203.58 Aligned_cols=188 Identities=13% Similarity=0.209 Sum_probs=128.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|++|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 589999999999976 34589999999999997 699999999999999998888874 4699999
Q ss_pred ceEEEec--CCe-eeecccccCChHHHHHHHHHHHHHHhcCCCc--eEeec--cc--eEEEEeecCChhhhHHHHHHHHH
Q 003145 669 GMFLRCT--TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQR--ET--SLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 669 G~~i~~~--~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs--~iE~k--~~--sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
|+++... +.. +... .+ .+.++++...+..+.. .+... .. .....+...+ . .++.+
T Consensus 68 Ga~i~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~ 131 (230)
T PRK01158 68 GGVISVGFDGKRIFLGD----IE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP----V---EEVRE 131 (230)
T ss_pred CeEEEEcCCCCEEEEcc----hH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc----H---HHHHH
Confidence 9998753 222 2211 11 1223333222221111 11100 00 0001111111 1 12222
Q ss_pred HHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 740 HLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
.+ +.. ...+.++.+..++||.|+++|||.|++.++++++ ++++++++||| +.|| ||+ +++|+||||
T Consensus 132 ~l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~~vam~Na 201 (230)
T PRK01158 132 LL-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGFGVAVANA 201 (230)
T ss_pred HH-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCceEEecCc
Confidence 23 221 1235566666789999999999999999999998 78899999999 9999 999 899999999
Q ss_pred CCcc
Q 003145 816 INSL 819 (844)
Q Consensus 816 ~~~~ 819 (844)
.+++
T Consensus 202 ~~~v 205 (230)
T PRK01158 202 DEEL 205 (230)
T ss_pred cHHH
Confidence 8765
No 56
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.87 E-value=3.4e-20 Score=215.49 Aligned_cols=275 Identities=16% Similarity=0.100 Sum_probs=188.5
Q ss_pred CCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh-hhhhcCC-c---cHHHHHhhhcCCEEEEecHHHHHHHH
Q 003145 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS-EIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 229 ~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~-e~~r~lp-~---r~~ll~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..++|+|+++-..... +.++ +..+.++++.++|.-.-.. ..-...+ | -+..+..+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567998887555433 3333 5567899999999642111 0000000 1 12223444456888777764433332
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~ 383 (844)
..... +.+...+|.++|+|++...+.+. ....+..|++||||.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11223568899999876543221 0113468999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+.++.++.|++ .|+++|. +++. +++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~~----~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGEK----QKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chhH----HHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999989875 4887864 3333 3455555543321 1 255 46754 578899999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCC-Cchhhc--cCCeEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 532 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~-G~~~~l--g~~g~lvnP----~d----~~~~A~ai~~aL~m~~~er 532 (844)
|+||.+||||++++|||||| .|+|+|... |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999996 789999986 677777 788999974 33 8899999999994 4467
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 533 EKRHWHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
.++.+.+++.++++++..-++.+.+.+++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 77888889999999999988888766653
No 57
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.87 E-value=2.7e-20 Score=206.39 Aligned_cols=265 Identities=20% Similarity=0.219 Sum_probs=190.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|..+...+..++.+. .++|+.+.+|-.++.... ... .+..+|.+.+.+....+.+. ...
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~------~~~---~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARR-TRPPFVTTVHGFYSVNFR------YNA---IMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHHh-cCCCEEEEeCCchhhHHH------HHH---HHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 4699999987766555554433 378999999977653321 112 23468888877765444433 112
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ 387 (844)
+. ...++.++|+|||...|.+..... .....+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 21 234788999999998886532211 1222345554 367789999999999999999999999
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcC
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S 467 (844)
+.++.++ +.|+++|.+.. ...+.+.+.+.+.+.+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~~-----~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQG-----RRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCcc-----cchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9877665 45888875321 123334444444443221 12554 666 678999999999999999
Q ss_pred -CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 468 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 468 -~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
..||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|+++++++|..++..+++++.++.+++++.++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999996 899999998888877 347999999999999999998888888899999999888875
Q ss_pred h
Q 003145 545 T 545 (844)
Q Consensus 545 ~ 545 (844)
+
T Consensus 348 ~ 348 (355)
T cd03819 348 T 348 (355)
T ss_pred H
Confidence 4
No 58
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.87 E-value=5.7e-21 Score=205.92 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=140.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc---eEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---~lia 666 (844)
..++|++|+||||++. ...++++++++|++|.+ .|+.|+|+|||+...+.++++.+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 4789999999999976 24578899999999987 6999999999999999999998854 5999
Q ss_pred ecceEEEecCC-e----eeecccccCChHHHHHHHHHHHHHHhcCCCceE--ee-----------------------ccc
Q 003145 667 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ-----------------------RET 716 (844)
Q Consensus 667 enG~~i~~~~~-~----w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--E~-----------------------k~~ 716 (844)
+||+.+...++ . +. ......+ .+.+.++++...+. .+..+ .. ...
T Consensus 71 ~NGa~I~~~~~~~~~~~~~-~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFP-RIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCce-EeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 10 1111223 23444444443221 01000 00 000
Q ss_pred eEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCC---CCceE
Q 003145 717 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 793 (844)
Q Consensus 717 sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~---~~d~v 793 (844)
...+.+.. ++ .+..++.+.+ .. ..+.++.+..++||+|+++|||.|++.|++++| + +.+++
T Consensus 146 ~~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 00111110 11 1223344555 32 135666666799999999999999999999999 7 88999
Q ss_pred EEEeeCCCch--hhc--cCcEEEeCCCCc---c------hhhh--cCCHHHHHHHHHHHhh
Q 003145 794 LCIGHFLGKV--LLT--QFLIQVGSSINS---L------SKEK--KRKVHQLFGIFLRFSY 839 (844)
Q Consensus 794 laiGD~~~nD--Mf~--g~~Iavgna~~~---~------a~~~--l~~~~~v~~~l~~~~~ 839 (844)
+|||| +.|| ||+ |+||||||+.++ + |.+. -.+.+-+...|+++..
T Consensus 210 iafGD-s~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~ 269 (271)
T PRK03669 210 LGLGD-GPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFS 269 (271)
T ss_pred EEEcC-CHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHh
Confidence 99999 9999 999 999999987632 2 2222 2334456666665543
No 59
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.86 E-value=3.5e-20 Score=205.69 Aligned_cols=253 Identities=18% Similarity=0.074 Sum_probs=172.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHH-hhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+.|+|++|..+...++..+.+......+.+..|..+...+..........+.. .+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 56999999988777777776665555567777876654332221111001111 1234666666555443333220
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~ 386 (844)
....++.++|+|||.+.|.+... ..+. +..+ .++.+|+++||+++.||+..+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11357889999999988764321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
.+.+++|++ .|+++|. ++....+++ .+.+.+. . ..|.+ .|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~~----~l~ivG~-----g~~~~~~~~----~~~~~~~----~--~~v~~-~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPNA----KLLLVGD-----GELEEEIKK----KVKELGL----E--DKVIF-LGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCCe----EEEEEeC-----CchHHHHHH----HHHhcCC----C--CcEEE-ecc--cCCHHHHHHhcCEEEec
Confidence 999888864 4888864 233333333 3333221 1 13554 565 67899999999999999
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccC-CeEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEERE 533 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~-~g~lvnP~d~~~~A~ai~~aL~m~~~er~ 533 (844)
|..||||++++|||||| .|+|+|+.+|..+.++. ++++..+.+++++|++|.++++++...+.
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~ 337 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRERS 337 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchhhh
Confidence 99999999999999996 89999999999988844 35555566789999999999998864433
No 60
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.86 E-value=1.3e-19 Score=206.60 Aligned_cols=272 Identities=14% Similarity=0.102 Sum_probs=191.4
Q ss_pred CCCEEEEeCccch-hHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh-hhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~-llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~-ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
+.|+++.|-++.. ....+++++....++....|-.....+.. .+....+.+. +-.+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 4567766654443 33345666655556888888532111111 1111112222 34689999888766554432
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
.++ ....++.++|+|+|...+.+. + ...+...|+++||+.+.||++.+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 111 123467899999998765431 0 013567899999999999999999999999
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh--CcEEEEc
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 466 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~--ADv~v~~ 466 (844)
.+.+|+.. +.++.+|. ++....++ +++.+.+. ...|. +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~iiG~-----g~~~~~l~----~~~~~~~~------~~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHIGG-----GPLEDTLK----ELAESKPE------NISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEEeC-----chHHHHHH----HHHHhcCC------CceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99888753 66776764 33333333 34332111 01255 5899999999999986 7899999
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPW-NITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~-d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
|..|||+++++|||||| .|+|+|..+|..+.+ |.+|++++|. |++++|++|.+++++ ++++.++.+++++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999996 799999999999888 4468999874 899999999999984 568888888888887
Q ss_pred -HhcCHHHHHHHHH
Q 003145 544 -TTHTAQEWAETFV 556 (844)
Q Consensus 544 -~~~~~~~W~~~fl 556 (844)
++|++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 6789999988875
No 61
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.86 E-value=2.1e-20 Score=206.67 Aligned_cols=276 Identities=20% Similarity=0.186 Sum_probs=199.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCCh--hhhhc---CCccHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~--e~~r~---lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
...|+||+|++..... +....++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+....+.+..
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4579999998777665 456889999999765422 11110 011223344456789988888766555543
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. .+ ....++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ~----~~-----------~~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 Y----LG-----------VPPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred H----hC-----------cCHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 2 11 12346789999999887654211 11 1111222578899999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
+..+.+.+|+ +.|+++|..... +......+ .+.+. ...+.+.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~~----~~~~~~~~----~~~~~-------~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGWL----NEELLARL----RELGL-------GDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCccc----cHHHHHHH----HHcCC-------CCeEEECCCCChhHHHHHHhhhhhhc
Confidence 9999888774 447777643211 11112222 11111 12344689999999999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
+||..||+|++++|||+|| .|+|+|+.+|..+.++.+|++++|.|.++++++|.++++. ++.+..+.+++++.+.
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999996 7899999888888777889999999999999999999875 5577777788888899
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
+++|+.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
No 62
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.86 E-value=5.1e-21 Score=201.89 Aligned_cols=193 Identities=18% Similarity=0.307 Sum_probs=132.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~~ 671 (844)
|++|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.++++.++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999986 34589999999999998 599999999999999999999884 5899999999
Q ss_pred EEecCCeeeecccccCChHHHHHHHHHHHHHHhcC-------CC-ceEeec-----------c-----------------
Q 003145 672 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT-------PR-SHFEQR-----------E----------------- 715 (844)
Q Consensus 672 i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt-------~g-s~iE~k-----------~----------------- 715 (844)
+....++. +....++ .+.+..+++...... +. .++... .
T Consensus 66 i~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKI--LYEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEE--EEEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeeccccc--chhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94333331 1112233 344445554443321 11 111111 0
Q ss_pred -ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEE
Q 003145 716 -TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (844)
Q Consensus 716 -~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vl 794 (844)
..+.++. + ..+...+.+.+ ...+.+....+..+..++||.|+++|||.|++.|+++++ ++.+.++
T Consensus 141 i~ki~~~~---~----~~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFFP---D----PEDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEES---C----HHHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeeccc---c----chhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 0111110 1 11223333333 222222113345688999999999999999999999999 7889999
Q ss_pred EEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 795 CIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 795 aiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
+||| +.|| ||+ +++|+||||.+++.+
T Consensus 207 ~~GD-~~ND~~Ml~~~~~~~am~na~~~~k~ 236 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAGYSVAMGNATPELKK 236 (254)
T ss_dssp EEES-SGGGHHHHHHSSEEEEETTS-HHHHH
T ss_pred Eeec-ccccHhHHhhcCeEEEEcCCCHHHHH
Confidence 9999 9999 999 999999999876533
No 63
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.86 E-value=8.8e-20 Score=201.05 Aligned_cols=278 Identities=17% Similarity=0.187 Sum_probs=187.4
Q ss_pred CCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHH------HHhhhcCCEEEEecHHHHHH
Q 003145 229 YKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL------LRAVLAADLVGFHTYDYARH 301 (844)
Q Consensus 229 ~~~~DiVwvHDyhl-~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~l------l~~ll~aDlIgf~t~~~~~~ 301 (844)
....|+|++|+... ...+.....+..+.++.+..|..++...... -+....+ ...+..+|.+.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 34679999998432 2222222222347888999997665432100 0011111 11123466666665333222
Q ss_pred HHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCH
Q 003145 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 302 Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi 378 (844)
... .....++.++|+|+|.+.|.+... . .. ++.+ .++++|+++||+++.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPS-----R--GR-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchh-----h--hh-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 111 122357889999999988764311 0 01 2333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
..+++|+..+.+++|++ .|+++|... +.+. ..+..++.+.+. . ..|. +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~----~l~i~G~~~----~~~~---~~~~~~~~~~~~----~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDW----HLVIAGPDE----GGYR---AELKQIAAALGL----E--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCe----EEEEECCCC----cchH---HHHHHHHHhcCc----c--ceEE-EcCCCChHHHHHHHh
Confidence 99999999998887764 487776422 1121 222222222221 1 1244 589999999999999
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhcc-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg-~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~ 537 (844)
.||++++||..||||++++|||+|| .|+|+|+.+|..+.+. ..|+++ |.+.++++++|.++++++ +++.++.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999996 7999999999888873 345655 456699999999999987 67777888
Q ss_pred HHHHH-HHhcCHHHHHHHHH
Q 003145 538 HNFTH-VTTHTAQEWAETFV 556 (844)
Q Consensus 538 ~~~~~-v~~~~~~~W~~~fl 556 (844)
++++. .++++++.-++.++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 58899998888765
No 64
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.86 E-value=1.2e-19 Score=207.37 Aligned_cols=308 Identities=13% Similarity=0.106 Sum_probs=192.5
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-HHHH-----------------------H--
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLL-----------------------R-- 283 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~~ll-----------------------~-- 283 (844)
.+.|+++.||++.......||++.++++.+|+.|- .++-|.|-.. ..+- +
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHA----T~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHA----TLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecc----cccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 46799999999999999999988899999999993 4444432110 0000 0
Q ss_pred hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCC----chHHHHHH----
Q 003145 284 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIKE---- 355 (844)
Q Consensus 284 ~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~----~~~~~~~~---- 355 (844)
....||.+..-+.... .-|.. ..+++..+ |+|+|||++.|.+..... ..++.+.+
T Consensus 223 aa~~Ad~fttVS~it~----~E~~~------------Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITA----YEAEH------------LLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHH----HHHHH------------HhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 1112232222211100 01122 22333333 999999999987542110 11122222
Q ss_pred -HHHHh---CCCcEEEE-Eecccc-cCCHHHHHHHHHHHHHhCcCCC-CceEEEEEEcCCCCCh---------HHHHHHH
Q 003145 356 -LQETF---AGRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDV---------PEYQRLT 419 (844)
Q Consensus 356 -lr~~~---~~~~vil~-VdRld~-~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~i~~p~r~~~---------~~~~~l~ 419 (844)
++.++ .+++++++ +||+++ .||++.+|+|+.++-..-..-. +..++..+..|+..+. .-.++|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 34444 26678888 899999 9999999999998854211111 1223333444655431 2234566
Q ss_pred HHHHHHHHHhhcc--------------------------------------------------------------cC-CC
Q 003145 420 SQVHEIVGRINGR--------------------------------------------------------------FG-TL 436 (844)
Q Consensus 420 ~~l~~lv~~IN~~--------------------------------------------------------------~g-~~ 436 (844)
+.++++..+|+.+ |. ..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 6666655555544 00 01
Q ss_pred CcccEEEeCCCCC------HHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch----hhcc---
Q 003145 437 TAVPIHHLDRSLD------FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 503 (844)
Q Consensus 437 ~~~pv~~~~~~v~------~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~----~~lg--- 503 (844)
+...|+|....++ ..+...+|+.||+||+||++||||++++|||||| .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 2234555443333 2357889999999999999999999999999996 899999999884 4443
Q ss_pred CCeEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 504 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 504 ~~g~lvn-------P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
..|++|. +.+++++|++|.+.++++..++........+....++|.+-+..+++....+
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~A 587 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLA 587 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 3578887 4668899999999997654333333333346678899999998888766543
No 65
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.86 E-value=6.3e-20 Score=208.73 Aligned_cols=188 Identities=15% Similarity=0.075 Sum_probs=132.0
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEec-c-cccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR-L-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR-l-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
.++.++|+|||++.+....... ..+ ...++++|++|+| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4788999999975432211100 001 1246789999999 4 5789999999999875 22 366888
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC-CCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~-v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
+|.+. ++. . ..|.+ .|. .+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~~---~-------------------~~v~~-~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS----PFT---A-------------------GNVVN-HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC----ccc---c-------------------cceEE-ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 87421 100 0 12444 333 36789999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 560 (844)
| .|||+|+.+|+.+.+ +.+|++|+|.|++++|+++...+... ........+++. .+.|+++.-++++++.++
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 899999999998887 45799999999999998643222110 000112334555 466999999998887665
Q ss_pred H
Q 003145 561 D 561 (844)
Q Consensus 561 ~ 561 (844)
+
T Consensus 404 ~ 404 (405)
T PRK10125 404 N 404 (405)
T ss_pred h
Confidence 3
No 66
>PLN02887 hydrolase family protein
Probab=99.86 E-value=1.4e-20 Score=219.35 Aligned_cols=224 Identities=13% Similarity=0.167 Sum_probs=141.8
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
..+.|+. +.|||++|+||||++. +..++++++++|++|.+ .|+.|+|+|||++..+.++++.++
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhC
Confidence 3444544 6899999999999986 35689999999999998 699999999999999998888764
Q ss_pred c-----------eEEeecceEEEe-cCCe-eeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEE---------
Q 003145 662 L-----------WLAAENGMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--------- 719 (844)
Q Consensus 662 l-----------~liaenG~~i~~-~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~--------- 719 (844)
+ ++|+.||+++.. .++. +... ++ .+.+.++++...+..-...+...+....
T Consensus 364 l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~ 436 (580)
T PLN02887 364 LAGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDS 436 (580)
T ss_pred cccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHH
Confidence 2 356679999985 2222 3332 33 3444455544322111000110000000
Q ss_pred EE--ee--c---C-Ch-hh------------h--HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHH
Q 003145 720 WN--YK--Y---A-DV-EF------------G--RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDR 775 (844)
Q Consensus 720 ~h--y~--~---~-d~-e~------------~--~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~ 775 (844)
++ +. . . +. ++ . .....++.+.+ ...+. ..+.++ ++.+++||.|+|+|||.||+.
T Consensus 437 ~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~ 514 (580)
T PLN02887 437 LHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKM 514 (580)
T ss_pred HHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHH
Confidence 00 00 0 0 00 00 0 00011222333 22222 235544 467899999999999999999
Q ss_pred HHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCC--HHHHHHHHHHH
Q 003145 776 ILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRK--VHQLFGIFLRF 837 (844)
Q Consensus 776 Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~--~~~v~~~l~~~ 837 (844)
|++++| ++.++|+|||| +.|| ||+ |+|||||||.+++ |++...+ .+-|..+|+++
T Consensus 515 L~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 515 LLNHLG------VSPDEIMAIGD-GENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred HHHHcC------CCHHHEEEEec-chhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 999999 88999999999 9999 999 9999999998754 3333322 22355555544
No 67
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.86 E-value=8.7e-20 Score=201.80 Aligned_cols=280 Identities=20% Similarity=0.162 Sum_probs=192.2
Q ss_pred CCCEEEEeCccch----hHHHHHH-hcCCCCeEEEEEecCCCChhhhhcCCccHHHHH-hhhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM----FLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~----llp~~lr-~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..|+|++|+++-. ......+ ....+.|+.+.+|...+.... .....+.+ .+-.+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 4589999873311 1111111 123688999999986222111 11122222 234689999886444444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. . ...++.++|+|+|...+..... . + ......++++|+++||+.+.||+..+++|
T Consensus 152 ~----------------~-~~~~~~~i~~~~~~~~~~~~~~------~-~-~~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R----------------A-YPEKIAVIPHGVPDPPAEPPES------L-K-ALGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h----------------c-CCCcEEEeCCCCcCcccCCchh------h-H-hhcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 1 0 0247889999999876643210 0 1 11112467899999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
++.+.+++|++ .|+++|.... +.........+++.+.+.. ..|.++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~~----~l~i~G~~~~----~~~~~~~~~~~~i~~~~~~------~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPDV----RLLVAGETHP----DLERYRGEAYALAERLGLA------DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCCe----EEEEeccCcc----chhhhhhhhHhHHHhcCCC------CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 99998887764 4887764321 1111111100223332211 13665445599999999999999999
Q ss_pred EcCCCc--CCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 465 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 465 ~~S~~E--G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
+||..| |++++++|||||| .|+|+|+.+| .+.+ +.+|+++++.|+++++++|.++++++ +.+.++.++++
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999996 7899999888 6666 56799999999999999999999865 46677788888
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
+++++++++.+++.+++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887654
No 68
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.85 E-value=8.2e-20 Score=205.02 Aligned_cols=268 Identities=19% Similarity=0.148 Sum_probs=187.3
Q ss_pred CCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCC-CChhhhhcCCc---cHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 229 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 229 ~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pf-p~~e~~r~lp~---r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..+.|+|++|-.+.... .+.......++..++|... .....-...++ .+.++..+-.+|.|.+.+..-.+.+..
T Consensus 97 ~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~ 174 (372)
T cd04949 97 DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQK 174 (372)
T ss_pred CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHH
Confidence 46789999987776655 2233334556667777532 11110001112 244555566789898888765555533
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~A 384 (844)
. ++ ...++.++|+|+|...+.+.. .....+..|+++||+.+.||+..+|+|
T Consensus 175 ~----~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li~a 225 (372)
T cd04949 175 Q----FG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLIKA 225 (372)
T ss_pred H----hC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHHHH
Confidence 1 11 112378999999988765321 011356789999999999999999999
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
+.++.+++|+++ |+++|.+. ....++ .++.+.+.. . .|. +.|. .+++..+|+.||++|
T Consensus 226 ~~~l~~~~~~~~----l~i~G~g~-----~~~~~~----~~~~~~~~~----~--~v~-~~g~--~~~~~~~~~~ad~~v 283 (372)
T cd04949 226 FAKVVKQVPDAT----LDIYGYGD-----EEEKLK----ELIEELGLE----D--YVF-LKGY--TRDLDEVYQKAQLSL 283 (372)
T ss_pred HHHHHHhCCCcE----EEEEEeCc-----hHHHHH----HHHHHcCCc----c--eEE-EcCC--CCCHHHHHhhhhEEE
Confidence 999999998754 77777532 222232 233332221 1 244 4663 467999999999999
Q ss_pred EcCCCcCCChhHhhhhhcccCCCceEEEeCCC-Cchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 465 ~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~-G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
+||..||||++++|||+|| .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|..+++++ +.+.++.+++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~ 358 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYE 358 (372)
T ss_pred ecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 9999999999999999996 789999876 677776 67899999999999999999999875 567777788888
Q ss_pred HHHhcCHHHHHHH
Q 003145 542 HVTTHTAQEWAET 554 (844)
Q Consensus 542 ~v~~~~~~~W~~~ 554 (844)
...++++..++++
T Consensus 359 ~~~~~s~~~~~~~ 371 (372)
T cd04949 359 NAERYSEENVWEK 371 (372)
T ss_pred HHHHhhHHHHHhc
Confidence 8888888887764
No 69
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.85 E-value=1.5e-20 Score=196.67 Aligned_cols=188 Identities=19% Similarity=0.235 Sum_probs=126.5
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecceE
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 671 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~~ 671 (844)
|++|+||||++. ...++++++++|++|++ .|+.|+++|||+...+.+++..++ .++|++||++
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 589999999976 34589999999999987 699999999999999998888774 5799999999
Q ss_pred EEecCC---eeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 672 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 672 i~~~~~---~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
+...++ .|... .+..|................-.+. ............+++ .+.++.+++ .
T Consensus 66 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~------~ 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAY----LEEEWFLDIVIAKTFPFSRLKVQYP--RRASLVKMRYGIDVD----TVREIIKEL------G 129 (225)
T ss_pred EEeCCCCceEEecc----cCHHHHHHHHHhcccchhhhccccc--cccceEEEeecCCHH----HHHHHHHhc------C
Confidence 986332 24332 2334433211111000000000000 011111111111222 223333333 1
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
..+.+.++..++||.|+++|||.|+++++++++ ++.+++++||| +.|| ||+ +++|+||||.+++
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~~vam~Na~~~~ 197 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGFGVAVANAQPEL 197 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCceEEcCChhHHH
Confidence 123334556799999999999999999999998 78899999999 9999 998 8999999998765
No 70
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.85 E-value=3.2e-19 Score=197.35 Aligned_cols=267 Identities=19% Similarity=0.158 Sum_probs=192.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|..+...+..++..+....++.+.+|.+-.... +....+...+-.+|.+...+....+.+.+. .
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----L 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----c
Confidence 4699999987665555555555557888888885421111 000223334457999998887666655331 1
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||+..+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 1 1245788999999998875421 0112456789999999999999999999999877
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC-
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~- 469 (844)
..|+ +.|+++|.. +.. .++.+.+.+.+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----ccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence 6554 558777642 222 233333333321 1233458999999999999999999999999
Q ss_pred -----cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 470 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 470 -----EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
||||++++|||+|| .|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++++. ++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~-~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDPE-LRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Confidence 99999999999996 789999988887777 447999999999999999999998754 567777777777
Q ss_pred H-HhcCHHHHHHH
Q 003145 543 V-TTHTAQEWAET 554 (844)
Q Consensus 543 v-~~~~~~~W~~~ 554 (844)
+ +.|++...++.
T Consensus 342 ~~~~~s~~~~~~~ 354 (355)
T cd03799 342 VEEEFDIRKQAAR 354 (355)
T ss_pred HHHhcCHHHHhhc
Confidence 6 56788776653
No 71
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.85 E-value=3.4e-19 Score=195.63 Aligned_cols=279 Identities=19% Similarity=0.176 Sum_probs=193.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCC-ccHHHHHhh-hcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAV-LAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp-~r~~ll~~l-l~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|+++...............++.+..|..++... ...+ ....+..-+ -.+|.+...+......+...
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~--- 154 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQAI--- 154 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHHc---
Confidence 4699999999987777776665568889999998665421 0001 111222222 23566655554333332220
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 385 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af 385 (844)
+. ...++.++|+|+|...|.+... ....+++++ .++++|+++||+.+.||+..+++|+
T Consensus 155 --~~-----------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 155 --GY-----------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred --CC-----------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 11 2346788999999988764321 112233444 3567899999999999999999999
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
..+.+++|+ +.|+++|.+. ....++.... ...+ ... .|.+ .+. .+++..+|+.||++++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~~~~~~---~~~~----~~~--~v~~-~g~--~~~~~~~~~~adi~v~ 274 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANLELLAL---KELG----LED--KVIL-LGE--RSDVPALLNALDVFVL 274 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHHHHHHH---HhcC----CCc--eEEE-ccc--cccHHHHHHhCCEEEe
Confidence 999888776 4587776532 1111221111 1211 111 2443 553 4689999999999999
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-H
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-T 544 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~ 544 (844)
||..||+|++++|||+|| .|+|+|+.+|..+.+..+|+++++.|+++++++|.++++++ +++.++.+++++++ +
T Consensus 275 ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 349 (365)
T cd03807 275 SSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIEE 349 (365)
T ss_pred CCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHH
Confidence 999999999999999996 79999999998888855799999999999999999999976 56777777888877 5
Q ss_pred hcCHHHHHHHHHHHH
Q 003145 545 THTAQEWAETFVSEL 559 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l 559 (844)
.+++...++.+++.+
T Consensus 350 ~~s~~~~~~~~~~~y 364 (365)
T cd03807 350 NFSIEAMVEAYEELY 364 (365)
T ss_pred hCCHHHHHHHHHHHh
Confidence 689999999887654
No 72
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.85 E-value=9.8e-20 Score=207.26 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=136.2
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHHh-C-C--CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQETF-A-G--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
.+.|||++.|.+.... +++.+ + + .+++++||||.+.||+..+|+|+..+.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG- 266 (462)
T ss_pred cCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC-
Confidence 4589999988754221 11122 2 2 357999999999999999999999988877864 488775
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+||+.++|++. +.+++. .+.+|.|..+.+ .+|+.+||||+||.+||||+|++||||||
T Consensus 267 ----dGp~~~~L~~~----a~~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G--- 324 (462)
T PLN02846 267 ----SGEDSDEVKAA----AEKLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG--- 324 (462)
T ss_pred ----CCccHHHHHHH----HHhcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC---
Confidence 45665555544 443321 234467765554 58999999999999999999999999996
Q ss_pred CceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 487 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 487 ~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
.|+|+++..| .+.+ +.+|+++ .|.++++++|.++|..+++++.. + ..+.++|+.-+++|+..+.-.
T Consensus 325 -~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~---a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 325 -KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---A---QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred -CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---H---HHHhCCHHHHHHHHHHHhccC
Confidence 7888888776 5766 6788888 48999999999999865433211 1 224889999999998776543
No 73
>PHA01633 putative glycosyl transferase group 1
Probab=99.85 E-value=3.2e-19 Score=195.83 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=145.6
Q ss_pred EecccChhHHhhhhcCCchHHHHHHHHHH----hCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 331 FPIGIDSERFIRALEINPVQVHIKELQET----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~~~~~~~~lr~~----~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
+|+|||++.|.+... ...+++++ +.+..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 678999999875321 11223333 34667899999999999999999999999999998766677776641
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC--CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhccc
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 484 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~--~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~ 484 (844)
.. +.++ + ..+ .|+++. |.++.+++.++|+.||+||+||..||||++++||||||
T Consensus 192 ------~~-------~~~l----~----l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G- 247 (335)
T PHA01633 192 ------KQ-------FTQL----E----VPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG- 247 (335)
T ss_pred ------HH-------HHHc----C----CCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-
Confidence 11 1111 1 111 366532 67789999999999999999999999999999999996
Q ss_pred CCCceEEEeCCCCchhhcc------------------C--CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 485 LKKGVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 485 ~~~g~lVlSe~~G~~~~lg------------------~--~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
.|+|+|..+|..+..| . .|++++++|++++|++|.+++.++. +..|..++++..+
T Consensus 248 ---~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~ 322 (335)
T PHA01633 248 ---TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAK 322 (335)
T ss_pred ---CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHH
Confidence 7899998887777543 1 2567889999999999999988763 3344556678999
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
+++++.-.++|+
T Consensus 323 ~f~~~~~~~~~~ 334 (335)
T PHA01633 323 KYDIRNLYTRFL 334 (335)
T ss_pred hcCHHHHHHHhh
Confidence 999998888775
No 74
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.84 E-value=1.8e-20 Score=199.44 Aligned_cols=222 Identities=16% Similarity=0.193 Sum_probs=149.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEEe
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAA 666 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~lia 666 (844)
+.||++|+||||++..+ .+...++++.++|+++.+ +|+.++++|||+...+..+...++ -.+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 35899999999998421 134578999999999987 699999999999999998866552 24899
Q ss_pred ecceEEEecCC-----eeeecccccCChHHH-HHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHH
Q 003145 667 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 740 (844)
Q Consensus 667 enG~~i~~~~~-----~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~ 740 (844)
+||+.|..++. .|... ....|. +.+..+...+...++....+.+..++.+.....+. .....++.+.
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~---~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEY----LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAA---PEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHH----HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhh---hHHHHHHHHH
Confidence 99999986331 12211 112233 23444444444444544445555666666432111 1112233333
Q ss_pred HhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc---cCcEEEeC
Q 003145 741 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT---QFLIQVGS 814 (844)
Q Consensus 741 L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~---g~~Iavgn 814 (844)
+ .. . +..+.+ .+++.++||+|+++|||.|++.|++.++ ++.+.+++||| +.|| ||+ +.+|+|+|
T Consensus 142 l-~~-~-~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 142 L-KE-T-GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred H-Hh-c-CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHccCCcEEEECC
Confidence 3 22 1 223444 5678899999999999999999999998 78899999999 9999 997 47999999
Q ss_pred CCCcchhh---------hcCCHHHHHHHHHHHhhcc
Q 003145 815 SINSLSKE---------KKRKVHQLFGIFLRFSYSG 841 (844)
Q Consensus 815 a~~~~a~~---------~l~~~~~v~~~l~~~~~~~ 841 (844)
|.+++.+. .+++-...-+|++.|-..|
T Consensus 212 a~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~~ 247 (249)
T TIGR01485 212 AQEELLQWYDENAKDKIYHASERCAGGIIEAIAHFD 247 (249)
T ss_pred CHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHcC
Confidence 99887653 1223333456666666555
No 75
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.84 E-value=4.2e-19 Score=195.89 Aligned_cols=272 Identities=20% Similarity=0.195 Sum_probs=187.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccH---------HHHH-hhhcCCEEEEecHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLLR-AVLAADLVGFHTYDYAR 300 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~---------~ll~-~ll~aDlIgf~t~~~~~ 300 (844)
..|+|++|+............+..++++.+.+|.+++.. ....+... .+.+ .+..+|.|.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 458999998654433333333345789999999887632 22211110 1112 23457888877765443
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCC
Q 003145 301 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 377 (844)
Q Consensus 301 ~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KG 377 (844)
.+.. .+...++.++|+|+|...|.+... .. .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----------------YGVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----------------cCCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 111235889999999987764321 01 12222 35778999999999999
Q ss_pred HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003145 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (844)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 457 (844)
+..+++|+..+.++.|+ +.|+++|.+ +.. ..+.+++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGDG-----PER----EELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeCC-----chH----HHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999999887665 558877642 222 2333444333221 1244 58999999999999
Q ss_pred HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003145 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (844)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r 535 (844)
+.||++++||..||+|++++|||+|| .|+|+|..++..+.+ +.+|+++++.|. +++++|.++++++. .+.++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999996 789999988888877 468999999888 99999999998765 45667
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHH
Q 003145 536 HWHNFTHVTTHTAQEWAETFVSE 558 (844)
Q Consensus 536 ~~~~~~~v~~~~~~~W~~~fl~~ 558 (844)
.++.++.+.+++ |++.+.+.
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~~ 370 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEKL 370 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHHH
Confidence 777788887766 44444433
No 76
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.84 E-value=6e-19 Score=192.74 Aligned_cols=279 Identities=23% Similarity=0.192 Sum_probs=200.9
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhh----cCCccHHHHHhhhcCCEEEEecHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 306 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r----~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~ 306 (844)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+....+.+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 46999999998887765 3444568999999999876532110 00011122233446788888877655554431
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH---hCCCcEEEEEecccccCCHHHHHH
Q 003145 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 307 ~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~---~~~~~vil~VdRld~~KGi~~~l~ 383 (844)
+.....++.++|+|+|...+.+.. ...+.. ..+++.|+++||+.+.||+..+++
T Consensus 163 --------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 219 (374)
T cd03801 163 --------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLE 219 (374)
T ss_pred --------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHH
Confidence 011124788999999988775321 111111 135688999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.+++|+ +.|+++|. ++....++ +++.+.+.. ..|. +.|.++.+++..+|+.||++
T Consensus 220 ~~~~~~~~~~~----~~l~i~G~-----~~~~~~~~----~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 220 ALAKLRKEYPD----VRLVIVGD-----GPLREELE----ALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred HHHHHhhhcCC----eEEEEEeC-----cHHHHHHH----HHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEE
Confidence 99999887765 55887762 23333333 333222211 1354 58999999999999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF- 540 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~- 540 (844)
++||..||+|++++|||+|| .|+|++..+|..+.+ +.+|+++++.|+++++++|.++++.+ +.+.++.++++
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~ 354 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARE 354 (374)
T ss_pred EecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 99999999999999999996 799999998888888 46799999999999999999999865 45666666666
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
...+.++++.+++.+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 355 RVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHhcCHHHHHHHHHHhh
Confidence 4568899999999887654
No 77
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.84 E-value=7.8e-19 Score=194.29 Aligned_cols=280 Identities=19% Similarity=0.174 Sum_probs=197.5
Q ss_pred CCCCCEEEEeC-ccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcC-C-------ccHHHHH-hhhcCCEEEEecHHH
Q 003145 229 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-P-------SRSDLLR-AVLAADLVGFHTYDY 298 (844)
Q Consensus 229 ~~~~DiVwvHD-yhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l-p-------~r~~ll~-~ll~aDlIgf~t~~~ 298 (844)
....|+|++|. ..+..++........+.++.+.+|..+|........ . ....+.+ .+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34579999997 344445555444555889999999988754321111 1 1111222 244689999998877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCH
Q 003145 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 299 ~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi 378 (844)
.+.+.. . .....++.++|+|+|...+.+..... .... .....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~-----------~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----R-----------GVPPEKISVIPNGVDLELFKPPPADE----SLRK-ELGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----c-----------CCCcCceEEcCCCCCHHHcCCccchh----hhhh-ccCCCCcEEEEEecCcccccCH
Confidence 766541 1 11234788999999998776432110 0000 0112467899999999999999
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
..+++|+..+.+. |+ +.|+++|. ++....+++. +...+ ...|.+ .+.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~~~~----~~~~~-------~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEELKEL----AKALG-------LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHHHHH----HHHcC-------CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998765 54 55777763 2323233322 21111 124665 67999999999999
Q ss_pred hCcEEEEcCCCcCC-----ChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHH
Q 003145 459 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 531 (844)
Q Consensus 459 ~ADv~v~~S~~EG~-----~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~e 531 (844)
.||++++||..|++ +++++|||+|| .|+|+|..+|..+.+ +.+|+++++.|+++++++|.+++++ +++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDD-PEE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHH
Confidence 99999999999876 66689999996 899999999999888 3479999999999999999999965 457
Q ss_pred HHHHHHHHHHHHH-hcCHHHHHHHHH
Q 003145 532 REKRHWHNFTHVT-THTAQEWAETFV 556 (844)
Q Consensus 532 r~~r~~~~~~~v~-~~~~~~W~~~fl 556 (844)
+.++.+++++++. .|+++.+++.++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 7778888888886 899999988763
No 78
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.84 E-value=3.5e-19 Score=199.69 Aligned_cols=264 Identities=14% Similarity=0.122 Sum_probs=177.6
Q ss_pred CCCEEEEeCccchhHHHHHHhc-CCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~-~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+||+|+.....+...+++. ....++..+.|..++....+. ...+..+|.+...+..-.+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 3599999998777666666654 233456666776544321111 11235688888777654444322
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccc--ccCCHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKLLAFEK 387 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld--~~KGi~~~l~Af~~ 387 (844)
.+. ...++.++|+|||.+.+... .+ ...++++|+++||+. +.||+..+++|+.+
T Consensus 151 ~~~-----------~~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RGI-----------SAQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cCC-----------CHHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 121 12367889999997665321 11 012467899999996 46999999999987
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCC--CHHHHHHHHHhCcEEEE
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL--DFPALCALYAVTDVALV 465 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v--~~~el~aly~~ADv~v~ 465 (844)
+. + ++.|+++|. +++.++ +++++++.+.. ..|. |.|.+ +.+++..+|+.||++|+
T Consensus 207 ~~---~----~~~l~ivG~-----g~~~~~----l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---G----EWQLHIIGD-----GSDFEK----CKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---C----CeEEEEEeC-----CccHHH----HHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhcCcEEEE
Confidence 52 2 466888874 333333 44444443321 1255 47765 45899999999999999
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeC-CCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~ 542 (844)
||..||||++++|||||| .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++.+.. | ......+.
T Consensus 264 ~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~~-~--~~~~~~~~ 336 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEVK-Y--QHDAIPNS 336 (359)
T ss_pred CCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCccc-C--CHHHHHHH
Confidence 999999999999999996 8999999 88888777 5689999999999999999999987742 1 12222334
Q ss_pred HHhcCHHHHHHHHHHHHHH
Q 003145 543 VTTHTAQEWAETFVSELND 561 (844)
Q Consensus 543 v~~~~~~~W~~~fl~~l~~ 561 (844)
+.++..+...+++...+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~ 355 (359)
T PRK09922 337 IERFYEVLYFKNLNNALFS 355 (359)
T ss_pred HHHhhHHHHHHHHHHHHHH
Confidence 5555556666666555544
No 79
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.84 E-value=7.4e-20 Score=196.99 Aligned_cols=217 Identities=15% Similarity=0.219 Sum_probs=138.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEee
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 667 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liae 667 (844)
+.|||++|+||||++. +..++++++++|++|.+ +|+.|+|+|||++..+.+.++.++ .++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (272)
T PRK10530 2 TYRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICC 66 (272)
T ss_pred CccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEc
Confidence 3689999999999976 34689999999999998 699999999999999999998884 369999
Q ss_pred cceEEEe-cCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccce------------EEE----------Eeec
Q 003145 668 NGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS------------LVW----------NYKY 724 (844)
Q Consensus 668 nG~~i~~-~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~s------------l~~----------hy~~ 724 (844)
||+.+.. .+++- +....++ .+.+.++++...+..-...+...+.. ..| .+..
T Consensus 67 NGa~i~d~~~~~~--l~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (272)
T PRK10530 67 NGTYLYDYQAKKV--LEADPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQ 141 (272)
T ss_pred CCcEEEecCCCEE--EEecCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEE
Confidence 9999985 23321 1111233 23444555443322111111000000 000 0000
Q ss_pred CCh--hh----h-----------HHHHHHHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcC
Q 003145 725 ADV--EF----G-----------RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKM 786 (844)
Q Consensus 725 ~d~--e~----~-----------~~qa~el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~ 786 (844)
.+. +. . .....++.+.+ . ...++.+ .++..++||.|+++|||.|+++++++++
T Consensus 142 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g----- 212 (272)
T PRK10530 142 VDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHV-E---HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG----- 212 (272)
T ss_pred cccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH-h---hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC-----
Confidence 000 00 0 00112222333 1 1223333 3455689999999999999999999999
Q ss_pred CCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcc---hhhhcCCHHH--HHHHHHHH
Q 003145 787 KTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSL---SKEKKRKVHQ--LFGIFLRF 837 (844)
Q Consensus 787 ~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~---a~~~l~~~~~--v~~~l~~~ 837 (844)
++++++++||| +.|| |++ |++|+|||+.+++ |.+...+.++ |..+|+++
T Consensus 213 -i~~~e~i~~GD-~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~ 270 (272)
T PRK10530 213 -WSMKNVVAFGD-NFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSH 270 (272)
T ss_pred -CCHHHeEEeCC-ChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHH
Confidence 78899999999 9999 998 8999999997764 3444433332 55555554
No 80
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.84 E-value=7e-19 Score=193.13 Aligned_cols=282 Identities=23% Similarity=0.216 Sum_probs=196.7
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
...|+|++|......+......+..+.++.+..|.+++....... ..+......+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~--- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG--- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc---
Confidence 356999999655444433333334457899999987654321111 1122233345578999988876666554311
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
....++.++|+|+|...|.+... .....+ ....++++|+++||+.+.||+..+++|++.+.
T Consensus 168 -------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~ 228 (377)
T cd03798 168 -------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARLL 228 (377)
T ss_pred -------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHHH
Confidence 12346889999999987764311 000111 11246788999999999999999999999998
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~ 469 (844)
+++|+ +.|+++|.+ +....++ +++...+. .+.+.+.|.++.+++..+|+.||++++||..
T Consensus 229 ~~~~~----~~l~i~g~~-----~~~~~~~----~~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~~ 288 (377)
T cd03798 229 KKRPD----VHLVIVGDG-----PLREALE----ALAAELGL-------EDRVTFLGAVPHEEVPAYYAAADVFVLPSLR 288 (377)
T ss_pred hcCCC----eEEEEEcCC-----cchHHHH----HHHHhcCC-------cceEEEeCCCCHHHHHHHHHhcCeeecchhh
Confidence 77665 457766532 2222233 33332221 1333458999999999999999999999999
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH-HHHHhc
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTTH 546 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~-~~v~~~ 546 (844)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+++ ...+.+
T Consensus 289 ~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~~ 361 (377)
T cd03798 289 EGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAERF 361 (377)
T ss_pred ccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHHh
Confidence 99999999999996 799999998888877 4567999999999999999999998754 4444444 445788
Q ss_pred CHHHHHHHHHHHHHH
Q 003145 547 TAQEWAETFVSELND 561 (844)
Q Consensus 547 ~~~~W~~~fl~~l~~ 561 (844)
++..+++.+.+.+++
T Consensus 362 s~~~~~~~~~~~~~~ 376 (377)
T cd03798 362 SWENVAERLLELYRE 376 (377)
T ss_pred hHHHHHHHHHHHHhh
Confidence 999999988877654
No 81
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.84 E-value=3.3e-19 Score=196.74 Aligned_cols=272 Identities=23% Similarity=0.193 Sum_probs=192.6
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc----HHHHHh-hhcCCEEEEecHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 305 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r----~~ll~~-ll~aDlIgf~t~~~~~~Fl~~ 305 (844)
..|+|++|.............+..++|+.+++|..||..-........ ..+.+. .-.+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 459999986544322222222334788999999887633211111111 122222 23578888777655442211
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEecccccCCHHHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 383 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~l~ 383 (844)
. ...++.++|+|+|.+.|.+..... ..++.+ .++++|+++||+.+.||+..+++
T Consensus 162 ---------------~--~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 ---------------R--GFRRVRLWPRGVDTELFHPRRRDE-------ALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred ---------------c--CCCceeecCCCccccccCcccccH-------HHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0 123578899999998876532211 112222 35788999999999999999999
Q ss_pred HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEE
Q 003145 384 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 463 (844)
Q Consensus 384 Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~ 463 (844)
|+..+.++ |++ .|+++|.+ ++...++ ..+ ..|.+ .|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~~----~l~i~G~~-----~~~~~~~--------~~~--------~~v~~-~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PPV----RLVIVGDG-----PARARLE--------ARY--------PNVHF-LGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CCc----eEEEEeCC-----chHHHHh--------ccC--------CcEEE-EeccCHHHHHHHHHhCCEE
Confidence 99998776 654 48777642 2221221 101 13554 7789999999999999999
Q ss_pred EEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 464 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 464 v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
++||..||||++++|||||| .|+|+|+.+|..+.+ +..|++++|.|.++++++|.+++..+ +++.++...+++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999996 799999999988887 35799999999999999999999865 577777888888
Q ss_pred HHHhcCHHHHHHHHHHHH
Q 003145 542 HVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 542 ~v~~~~~~~W~~~fl~~l 559 (844)
.++.+++..+++.+++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888999999999888654
No 82
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.83 E-value=7.8e-19 Score=191.13 Aligned_cols=262 Identities=17% Similarity=0.102 Sum_probs=182.4
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|+.+...+...+... ..++.+..|..++...... .+.......+-.+|.+.+.+......+
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~-------- 150 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALY-------- 150 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHh--------
Confidence 5699999988722222222221 1478888887765332111 011112233446888888776543110
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
......++.++|+|+|...+.+. ...+++.++++||+.+.||+..+++|+..+.+
T Consensus 151 ----------~~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 151 ----------YKKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred ----------hccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 01123468899999998765432 11357899999999999999999999999988
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCc
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~E 470 (844)
..|++ .|+++|.+ ++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||..|
T Consensus 206 ~~~~~----~l~i~G~~-----~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPDW----KLRIVGDG-----PEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCCe----EEEEEeCC-----CCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCcccc
Confidence 77764 47777642 22222 2333333332 123334665 689999999999999999999
Q ss_pred CCChhHhhhhhcccCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 471 G~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
|||++++|||+|| .|+|+|+..|..+.+ +.+|+++++.|+++++++|.++++++ +.+.++.+++++.+++++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999996 789999876655544 34899999999999999999999864 466667777788889999
Q ss_pred HHHHHHHHH
Q 003145 548 AQEWAETFV 556 (844)
Q Consensus 548 ~~~W~~~fl 556 (844)
++..+++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 999988774
No 83
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.83 E-value=1.5e-18 Score=197.27 Aligned_cols=279 Identities=17% Similarity=0.144 Sum_probs=180.0
Q ss_pred HHHHHHHHhhC--CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhc------CCccH----------H
Q 003145 219 QMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS----------D 280 (844)
Q Consensus 219 ~~fa~~i~~~~--~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~------lp~r~----------~ 280 (844)
..+...+.+.. .+-|+|++|...+ +.++..+..++|..+..|--. ++.+.. .|.+. .
T Consensus 90 ~~~~~~l~~~~~~~~~D~v~~~~~~~---~~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (397)
T TIGR03087 90 RRLARWVNALLAAEPVDAIVVFSSAM---AQYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLA 164 (397)
T ss_pred HHHHHHHHHHHhhCCCCEEEEecccc---ceeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHH
Confidence 34444555554 3469999985433 333432334667777776421 111111 11110 0
Q ss_pred HHH-hhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHH
Q 003145 281 LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 359 (844)
Q Consensus 281 ll~-~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~ 359 (844)
+-+ .+-.+|.|.+.+....+.+.+ .. .....++.++|+|||.+.|.+....+ ..
T Consensus 165 ~e~~~~~~ad~vi~~S~~~~~~l~~----~~-----------~~~~~~v~vipngvd~~~f~~~~~~~----------~~ 219 (397)
T TIGR03087 165 YERAIAARFDAATFVSRAEAELFRR----LA-----------PEAAGRITAFPNGVDADFFSPDRDYP----------NP 219 (397)
T ss_pred HHHHHHhhCCeEEEcCHHHHHHHHH----hC-----------CCCCCCeEEeecccchhhcCCCcccc----------CC
Confidence 111 123567777777655544432 10 11234688999999999886532110 01
Q ss_pred h-CCCcEEEEEecccccCCHHHHH----HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 360 F-AGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 360 ~-~~~~vil~VdRld~~KGi~~~l----~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
+ .++++|+++||+++.||+..++ +++..+.+++|+++ |+++|.+ ++ . +++++.. .
T Consensus 220 ~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~g-----~~-~----~~~~l~~----~-- 279 (397)
T TIGR03087 220 YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGAK-----PS-P----AVRALAA----L-- 279 (397)
T ss_pred CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECCC-----Ch-H----HHHHhcc----C--
Confidence 1 3567999999999999999887 56666777778754 8877642 22 1 2222211 1
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-cCCeEEECCC
Q 003145 435 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPW 512 (844)
Q Consensus 435 ~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g~~g~lvnP~ 512 (844)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||| .|+|+|..++..... +..|+++. .
T Consensus 280 ----~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~-~ 347 (397)
T TIGR03087 280 ----PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA-A 347 (397)
T ss_pred ----CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-C
Confidence 1255 478886 68999999999999997 599999999999996 788888764321111 34588885 8
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003145 513 NITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (844)
|++++|++|.+++++ ++.+.++.+++++++ +.|+|+..++.+.+.+.
T Consensus 348 ~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 348 DPADFAAAILALLAN-PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred CHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999985 456777888888887 67999999998876654
No 84
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.83 E-value=1.5e-18 Score=199.91 Aligned_cols=264 Identities=11% Similarity=0.089 Sum_probs=165.5
Q ss_pred CCCEEEEeCc-cchhH--HHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHH--
Q 003145 231 DGDVVWCHDY-HLMFL--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 305 (844)
Q Consensus 231 ~~DiVwvHDy-hl~ll--p~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~-- 305 (844)
+.|+|++|.. ||-.. +....+++ + +++..+||.|+.+--...+..-+.++. .++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhh
Confidence 5699999884 44444 23333333 3 688889999985322222222122111 122233332
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC---CCcEEEEEecccccCCHHHHH
Q 003145 306 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 382 (844)
Q Consensus 306 ~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VdRld~~KGi~~~l 382 (844)
|+.++.++..-.. +. ...|. ..+|||++.|.+.... ... ..++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq~--L~--~~vI~-nVnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQD--LP--KSVIC-NVHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHHH--hc--cccee-ecccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 5555544311011 11 11111 1259999999864221 111 2221 235589999999999999999
Q ss_pred HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcE
Q 003145 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (844)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 462 (844)
+|+..+.++.|+ +.|+++| +||+.+++++ ++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pn----vrLvIVG-----DGP~reeLe~----la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDG----FNLDVFG-----NGEDAHEVQR----AAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCC----eEEEEEc-----CCccHHHHHH----HHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 999998877776 4588786 3455444444 4443321 2554 45543 34479999999
Q ss_pred EEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 463 ~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
||+||.+||||+|++|||||| .|+|+|+..|. +.+ |.+|++. .|.++++++|.++|.+++ .+..+ .
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~-~--- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTP-E--- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHH-H---
Confidence 999999999999999999996 78999988774 334 4566654 789999999999999775 22221 1
Q ss_pred HHHHhcCHHHHHHHHHHHH
Q 003145 541 THVTTHTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l 559 (844)
....++|..-+++++..-
T Consensus 690 -a~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 690 -QRYNLSWEAATQRFMEYS 707 (794)
T ss_pred -HHhhCCHHHHHHHHHHhh
Confidence 134788888888887543
No 85
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.82 E-value=3.3e-18 Score=188.18 Aligned_cols=259 Identities=19% Similarity=0.201 Sum_probs=178.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|.+..+.++.+...+..++|+.+++|-.++...... .+.. ..|.+...+....+.|..
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~------~~~~---~~d~ii~~s~~~~~~~~~------ 160 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQG------LFKK---GGDAVIAPSRFLLDRYVA------ 160 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhh------hhcc---CCCEEEEeCHHHHHHHHH------
Confidence 3599999987555443332222346899999997654221111 1111 128887777655444432
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
+.....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 161 ----------~~~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 161 ----------NGLFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred ----------cCCCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 0111357899999999987754211 012356789999999999999999999998866
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-C
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~ 469 (844)
++ +.|+++|... ......... ..+ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~~~-----~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESYEL-----EGD--------PRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHHhh-----cCC--------CeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 43 5588776432 111111111 111 1354 5899999999999999999999998 7
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcC
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (844)
||+|++++|||+|| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++. ++.+.++.+++++.++.
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH--
Confidence 99999999999996 899999999888887 3479999999999999999999985 44666666666666543
Q ss_pred HHHHHHHHHHHH
Q 003145 548 AQEWAETFVSEL 559 (844)
Q Consensus 548 ~~~W~~~fl~~l 559 (844)
...++.+++.+
T Consensus 347 -~~~~~~~~~~~ 357 (359)
T cd03823 347 -EDQAEEYLKLY 357 (359)
T ss_pred -HHHHHHHHHHh
Confidence 55555555433
No 86
>PHA01630 putative group 1 glycosyl transferase
Probab=99.82 E-value=1.3e-18 Score=192.48 Aligned_cols=214 Identities=13% Similarity=0.081 Sum_probs=152.9
Q ss_pred cCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEE
Q 003145 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 366 (844)
Q Consensus 287 ~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vi 366 (844)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 478888877655444432 1111 1236889999999998864311 01234456
Q ss_pred EEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCC
Q 003145 367 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 446 (844)
Q Consensus 367 l~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~ 446 (844)
++++|+.+.||++.+|+|++.+.++.|+ +.|+++|.. +. +. .+. .++ + +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~~-----~~--~~--~l~----~~~------~------~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSSN-----ML--DP--RLF----GLN------G------VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeCc-----cc--ch--hhc----ccc------c------eec
Confidence 6677899999999999999999887775 457777621 11 11 110 111 1 135
Q ss_pred CCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEEC--------------
Q 003145 447 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-------------- 510 (844)
Q Consensus 447 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvn-------------- 510 (844)
.++.+++..+|+.||+||+||..||||++++|||||| .|+|+|..+|..+.+ |.+|++|+
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999996 899999998888877 45666653
Q ss_pred -----CCCHHHHHHHHHHHhcCC-HHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHH
Q 003145 511 -----PWNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELND 561 (844)
Q Consensus 511 -----P~d~~~~A~ai~~aL~m~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~~ 561 (844)
|.|.+++++++.++|..+ ++++++++ .......+++++...++.+++.++.
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 227889999999999874 23444444 4445567999999999999887753
No 87
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.82 E-value=1.6e-19 Score=192.99 Aligned_cols=198 Identities=17% Similarity=0.311 Sum_probs=130.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~ 670 (844)
||++|+||||++. ...++++++++|++|.+ .|+.|+|+|||++..+.+.+..++ .++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999986 34689999999999998 599999999999999999998884 479999999
Q ss_pred EEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCC--------CceEeeccce-EE----EEeec----CCh-----h
Q 003145 671 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTP--------RSHFEQRETS-LV----WNYKY----ADV-----E 728 (844)
Q Consensus 671 ~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~--------gs~iE~k~~s-l~----~hy~~----~d~-----e 728 (844)
++...++. .+....++ .+.+.++++...+..- +.++...... +. ..+.. .+. +
T Consensus 66 ~i~~~~~~--~i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGE--ILYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCC--EEeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 99864322 11112233 2344445544432211 1111110000 00 00000 000 0
Q ss_pred -h-------hHHHHHHHHHHHhcC-CCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 729 -F-------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 729 -~-------~~~qa~el~~~L~~~-~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+ ......++.+.+ .. .+ ...+.+ .++..++||.|+++|||.|++.+++.++ ++++.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 0 011122333333 21 11 123554 4577899999999999999999999998 78899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCCcc
Q 003145 799 FLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
+.|| ||+ +++++|||+.+++
T Consensus 213 -~~nD~~m~~~~~~~~a~~na~~~~ 236 (256)
T TIGR00099 213 -GMNDIEMLEAAGYGVAMGNADEEL 236 (256)
T ss_pred -cHHhHHHHHhCCceeEecCchHHH
Confidence 9999 998 8999999997654
No 88
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.82 E-value=2.3e-19 Score=186.65 Aligned_cols=191 Identities=15% Similarity=0.222 Sum_probs=127.2
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaen 668 (844)
.|+|++|+||||++. +..++++++++|++|++ +|+.|+|+|||++..+.+++..++ .++|++|
T Consensus 1 ik~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~N 65 (215)
T TIGR01487 1 IKLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAEN 65 (215)
T ss_pred CcEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEcc
Confidence 379999999999975 35689999999999987 699999999999999999988884 3699999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 748 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~ 748 (844)
|+++...++. ....+ ....|...-... ..+....-...+ ......+... ..+ ...+.+.+ ..
T Consensus 66 Ga~i~~~~~~-~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~--~~~-----~~~~~~~l-~~---- 127 (215)
T TIGR01487 66 GGVIFYNKED-IFLAN--MEEEWFLDEEKK-KRFPRDRLSNEY--PRASLVIMRE--GKD-----VDEVREII-KE---- 127 (215)
T ss_pred CcEEEeCCCc-EEEec--ccchhhHHHhhh-hhhhhhhccccc--ceeEEEEecC--Ccc-----HHHHHHHH-Hh----
Confidence 9999863332 11111 111121100000 001000000000 0111111111 111 11223333 21
Q ss_pred CCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 749 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 749 ~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
..+.++.+...+||.|.+++||.++++++++++ ++.+.+++||| +.|| ||+ +++|+|+|+.+++.+
T Consensus 128 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~~vam~na~~~~k~ 197 (215)
T TIGR01487 128 RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGFKVAVANADDQLKE 197 (215)
T ss_pred CCeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCCeEEcCCccHHHHH
Confidence 245555566789999999999999999999998 67889999999 9999 999 899999999876544
No 89
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.81 E-value=5.9e-18 Score=185.04 Aligned_cols=273 Identities=21% Similarity=0.150 Sum_probs=191.3
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCC--ccHHHHH-hhhcCCEEEEecHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLR-AVLAADLVGFHTYDYARHFVSACT 307 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp--~r~~ll~-~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (844)
..|+|++|..+..++..++.+.....++.+..|...+... ..... ....+.+ .+-.+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4599999988877777777665566777887776532211 00000 0011111 2235788888887776665441
Q ss_pred HHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHH
Q 003145 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (844)
Q Consensus 308 ~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ 387 (844)
+.. ....++.+.|+|+|.+.+.+.... ...++.+|+++||+.+.||+..+++|+..
T Consensus 157 ---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 ---GII---------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred ---cCC---------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 000 012457788999999877542110 12467899999999999999999999999
Q ss_pred HHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcC
Q 003145 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 467 (844)
Q Consensus 388 ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S 467 (844)
+.+++|+ +.|+++|...... + .... ++...+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~~---~--~~~~---~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEEN---P--AAIL---EIEKLGLE------GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcch---h--hHHH---HHHhcCCc------ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 9877775 4588777543211 1 1111 12222111 13554 555 678999999999999999
Q ss_pred CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HH
Q 003145 468 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 544 (844)
Q Consensus 468 ~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~ 544 (844)
..||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++..+ +.+.++..+++++ .+
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999996 799999999998887 56799999999999999999988754 4666777777777 58
Q ss_pred hcCHHHHHHHHH
Q 003145 545 THTAQEWAETFV 556 (844)
Q Consensus 545 ~~~~~~W~~~fl 556 (844)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 899999988775
No 90
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.81 E-value=4.9e-18 Score=186.73 Aligned_cols=243 Identities=19% Similarity=0.146 Sum_probs=167.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|++|+....++ . .+..+.|+.+++|..++.... .........+.+.+-+......+..
T Consensus 87 ~~Divh~~~~~~~~~--~--~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~------ 148 (335)
T cd03802 87 DFDIVHNHSLHLPLP--F--ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWPP------ 148 (335)
T ss_pred CCCEEEecCcccchh--h--hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhccc------
Confidence 469999999887766 2 234578899999987643211 1233344455554444322211100
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~ 390 (844)
. .++.++|+|||++.|.+. ..++.+|+++||+.+.||+..+++|+.+
T Consensus 149 -------------~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~--- 195 (335)
T cd03802 149 -------------L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARR--- 195 (335)
T ss_pred -------------c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHh---
Confidence 0 467899999999888641 1246789999999999999999999754
Q ss_pred hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-C
Q 003145 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 469 (844)
Q Consensus 391 ~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~ 469 (844)
++ +.|+++|.+. ..+ .+...+.+... ++ ..|. +.|.++.+++..+|+.||++++||. .
T Consensus 196 --~~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 196 --AG----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred --cC----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 23 4588787532 111 12222222110 11 1355 4899999999999999999999998 5
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-HHhc
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 546 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-v~~~ 546 (844)
||||++++|||||| .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++.++.+ +.++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999996 799999999998888 447999987 99999999999765421 11222 3778
Q ss_pred CHHHHHHHHHHH
Q 003145 547 TAQEWAETFVSE 558 (844)
Q Consensus 547 ~~~~W~~~fl~~ 558 (844)
+++.-+++++..
T Consensus 322 s~~~~~~~~~~~ 333 (335)
T cd03802 322 SAARMVDDYLAL 333 (335)
T ss_pred CHHHHHHHHHHH
Confidence 888888777654
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=99.81 E-value=1.1e-18 Score=185.65 Aligned_cols=205 Identities=17% Similarity=0.197 Sum_probs=129.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc---C-ceE
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 664 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~-l~l 664 (844)
.+.|||++|+||||+++ +.+++++++++|++|.+ .|+.|+|+|||++..+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 46899999999999987 45689999999999988 69999999999999998888743 2 367
Q ss_pred EeecceEEEecCCe-eeecccccCChHHHHHHHHHHHHHH-----hcCCCceEeeccceEEEEee-cCC-h----hhh--
Q 003145 665 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK-YAD-V----EFG-- 730 (844)
Q Consensus 665 iaenG~~i~~~~~~-w~~~~~~~~~~~w~~~v~~i~~~~~-----~rt~gs~iE~k~~sl~~hy~-~~d-~----e~~-- 730 (844)
|++||+++...++. +...++...+.++...+.++++.+. ....+.+++.........+. ... . ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 99999999864333 2222211234444444444443321 01122333322111111110 000 0 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch
Q 003145 731 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV 803 (844)
Q Consensus 731 ---~~qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD 803 (844)
.....++.+.+ ...+.+..+.... +..++||.|+|+|||.||+.|+++ .++|+||||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 01113344444 3323333333343 357999999999999999999986 3789999993 5788
Q ss_pred --hhc---cCcEEEeCCCCcc
Q 003145 804 --LLT---QFLIQVGSSINSL 819 (844)
Q Consensus 804 --Mf~---g~~Iavgna~~~~ 819 (844)
||+ .-|+.|+|+.+++
T Consensus 217 ieMl~~~~~~g~~v~n~~~~~ 237 (247)
T PTZ00174 217 YEIYNDPRTIGHSVKNPEDTI 237 (247)
T ss_pred HhhhhcCCCceEEeCCHHHHH
Confidence 998 4567788876654
No 92
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.81 E-value=5.1e-19 Score=186.78 Aligned_cols=194 Identities=15% Similarity=0.161 Sum_probs=130.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc----eEEeec
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 668 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l----~liaen 668 (844)
||++|+||||++. +..+++.+ ++|+ +.+ +|+.++|+|||+...+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~~-~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GSG-DAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hcC-CCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 6899999999975 23455655 7776 544 6999999999999999999988743 489999
Q ss_pred ceEEEecCCeeeecccccCChHHHHHH-----HHHHHHHHhcCCCceEeeccc--eEEEEeecCChhhhHHHHHHHHHHH
Q 003145 669 GMFLRCTTGKWMTTMPEHLNMEWVDSL-----KHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 741 (844)
Q Consensus 669 G~~i~~~~~~w~~~~~~~~~~~w~~~v-----~~i~~~~~~rt~gs~iE~k~~--sl~~hy~~~d~e~~~~qa~el~~~L 741 (844)
|+.+..... +. .+..|...+ ..-+..+....+|..++.+.. ...++++..+.... ...++.+.+
T Consensus 64 Ga~i~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPE-LQ------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGEP--ILPQIRQRL 134 (236)
T ss_pred CceEEeCCC-CC------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccch--HHHHHHHHH
Confidence 999864221 10 011121111 011233334466766655442 34556654321111 123334444
Q ss_pred hcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC
Q 003145 742 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI 816 (844)
Q Consensus 742 ~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~ 816 (844)
... ...+.+ ..+..++||.|+++|||.|++.|+++++ ++++.+++||| +.|| ||+ +++|+|+|+.
T Consensus 135 -~~~--~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~~~iav~na~ 204 (236)
T TIGR02471 135 -RQQ--SQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLTLGVVVGNHD 204 (236)
T ss_pred -Hhc--cCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCCcEEEEcCCc
Confidence 322 123444 4566889999999999999999999998 67899999999 9999 999 8999999998
Q ss_pred Ccchhh
Q 003145 817 NSLSKE 822 (844)
Q Consensus 817 ~~~a~~ 822 (844)
+++.+.
T Consensus 205 ~~~k~~ 210 (236)
T TIGR02471 205 PELEGL 210 (236)
T ss_pred HHHHHh
Confidence 765544
No 93
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.81 E-value=8.3e-18 Score=186.23 Aligned_cols=266 Identities=22% Similarity=0.209 Sum_probs=180.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHH-HHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~l-l~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
.+.|+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 45699999986544332222222 46788888886432211111 111122 22345688888777665544322
Q ss_pred HhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 388 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~l 388 (844)
. .....++.++|+|+|...|.+... .. ........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~------------~~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 L------------RRFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred h------------cCCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 1 111246889999999987754211 00 01111124678999999999999999999999876
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
. ++.|+++|.+ +.. ..+.+++.+.+.. ..|. +.|.++.+++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~g-----~~~----~~~~~~~~~~~~~------~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGEG-----PLE----AELEALAAALGLL------DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeCC-----hhH----HHHHHHHHhcCCc------ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 3 3668878642 222 2333443332211 1355 5899999999999999999999996
Q ss_pred --CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 003145 469 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (844)
Q Consensus 469 --~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v 543 (844)
.||||++++|||+|| .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +++.++.+++++++
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999996 789999988888766 46799999999999999999999864 57777778888877
Q ss_pred H-hcCHH
Q 003145 544 T-THTAQ 549 (844)
Q Consensus 544 ~-~~~~~ 549 (844)
. .+++.
T Consensus 348 ~~~~s~~ 354 (357)
T cd03795 348 EEEFTAD 354 (357)
T ss_pred HHhcchH
Confidence 4 45543
No 94
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.81 E-value=1.4e-18 Score=185.67 Aligned_cols=186 Identities=17% Similarity=0.138 Sum_probs=126.6
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~liaenG~ 670 (844)
||++|+||||++.. ..+.+.++++|++|.+ .|+.|+++|||+...+.+++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999763 2133468999999988 599999999999999999999885 479999999
Q ss_pred EEEecCCe------eeecccccCChHHHHHHHHHHHHHHhcCCCceE--ee----------------------ccceEEE
Q 003145 671 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF--EQ----------------------RETSLVW 720 (844)
Q Consensus 671 ~i~~~~~~------w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~i--E~----------------------k~~sl~~ 720 (844)
++...++. |. .....+ .+.+.++++.+..+.+..+. .. ......+
T Consensus 66 ~i~~~~~~~~~~~~~~--~~~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPV--IALGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEE--EEcCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99863321 21 111222 25566666654332111110 00 0000000
Q ss_pred EeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCC--CceEEEEee
Q 003145 721 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGH 798 (844)
Q Consensus 721 hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~--~d~vlaiGD 798 (844)
.+ +++ ....+.+.+ . ...+.+..+..++||.|+++|||.|+++|+++++ ++ .+++++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 112222333 2 1235666666799999999999999999999998 67 899999999
Q ss_pred CCCch--hhc--cCcEEEeCCCC
Q 003145 799 FLGKV--LLT--QFLIQVGSSIN 817 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavgna~~ 817 (844)
+.|| ||+ |++|+||||.+
T Consensus 203 -~~ND~~Ml~~ag~~vam~Na~~ 224 (256)
T TIGR01486 203 -SPNDLPLLEVVDLAVVVPGPNG 224 (256)
T ss_pred -CHhhHHHHHHCCEEEEeCCCCC
Confidence 9999 999 89999999973
No 95
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.80 E-value=6e-18 Score=193.51 Aligned_cols=270 Identities=9% Similarity=-0.013 Sum_probs=174.9
Q ss_pred CCCCEEEEeCccch--h-HHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-------HHHHHhh-hcCCEEEEecHHH
Q 003145 230 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-------SDLLRAV-LAADLVGFHTYDY 298 (844)
Q Consensus 230 ~~~DiVwvHDyhl~--l-lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-------~~ll~~l-l~aDlIgf~t~~~ 298 (844)
+..|+|++|..... . ++.++++ ..+.|+++.+|--+++..-. ..+.. ..+-+.+ -.||.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985532 2 2333333 34788999999654321101 01100 1111122 2467777666543
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHH---------------Hh--C
Q 003145 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------TF--A 361 (844)
Q Consensus 299 ~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~---------------~~--~ 361 (844)
.+.+.. .+ ....++.++|+| +.+.|.+.... .....+.. .. +
T Consensus 172 ~~~l~~-----~~-----------~~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FN-----------NWKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hh-----------ccCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 333221 11 124578899999 55677653211 11111110 01 2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCC--CCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~--~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
+..+++++||+.+.||+..+|+|+..+.+..++. ..++.|+++|. ++..+ ++++++.+.+. .
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~----~l~~~~~~~~l-------~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKE----KYLERIKELKL-------K 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHH----HHHHHHHHcCC-------C
Confidence 3467889999999999999999999987632110 11366888874 33333 44444444322 2
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEEcC---CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCH
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 514 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~ 514 (844)
.++++.+.++.+++..+|+.||++|.++ ..+||+++++|||||| .|+|+|..+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 4777788899999999999999999743 3588999999999996 799999999888888 56899994 99
Q ss_pred HHHHHHHHHHhcCC--HHHHHHHHHHHHHHHH
Q 003145 515 TEVANAIARALNMS--PEEREKRHWHNFTHVT 544 (844)
Q Consensus 515 ~~~A~ai~~aL~m~--~~er~~r~~~~~~~v~ 544 (844)
+++|++|.++++++ ++++.++.+++++..+
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 99999999999973 6677777777777664
No 96
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.79 E-value=1.6e-17 Score=184.48 Aligned_cols=268 Identities=16% Similarity=0.045 Sum_probs=179.3
Q ss_pred CCCEEEEeCccch--hHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHH-----HhhhcCCEEEEecHHHHHHHH
Q 003145 231 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 303 (844)
Q Consensus 231 ~~DiVwvHDyhl~--llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll-----~~ll~aDlIgf~t~~~~~~Fl 303 (844)
..|+++||..... .+..+++. .+.++.+.+|..-.....+.. ....++ ..+..+|.|...+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3467777765544 33333333 367888888853111111110 011111 123467888887764444432
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEEEEEecccccCCHHHH
Q 003145 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 304 ~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VdRld~~KGi~~~ 381 (844)
. ..+ ... .++|+|+|...+.+. ...++.+ .+++.++++||+.+.||+..+
T Consensus 160 ~----~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 E----KYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred H----hcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1 111 111 789999998766430 0112222 355678999999999999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|+.++.. ++.|+++|.+... . ++.+.+.+. .+.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~~--~---~~~~~~~~~-------~~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADHN--T---PYGKLLKEK-------AAAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCCc--c---hHHHHHHHH-------hCCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 3568888754211 1 233333321 1111 1355 589999999999999999
Q ss_pred EEEEcCCC-cCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 462 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 462 v~v~~S~~-EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
++++||.. ||||++++|||||| .|+|+|..+|..+.++.+|.+++|.|. +|++|.++++++ +.+.++.++++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999996 899999999888888678999988776 999999999876 45666677777
Q ss_pred HHHH-hcCHHHHHHHHHHHH
Q 003145 541 THVT-THTAQEWAETFVSEL 559 (844)
Q Consensus 541 ~~v~-~~~~~~W~~~fl~~l 559 (844)
+.+. .++|+.-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7775 589999888887654
No 97
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.79 E-value=1.2e-17 Score=186.08 Aligned_cols=249 Identities=20% Similarity=0.180 Sum_probs=169.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC----Ch-hhhhcCCcc-------------HHHHHhhhcCCEE
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSR-------------SDLLRAVLAADLV 291 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp----~~-e~~r~lp~r-------------~~ll~~ll~aDlI 291 (844)
.+.|+|+++.... ....+ ..+..+..+++|.|.+ .. ......+.. ....+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~--~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAV--AKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHH--hcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 3578987765322 22222 3457788888998631 11 111111110 0111224567888
Q ss_pred EEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEec
Q 003145 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 371 (844)
Q Consensus 292 gf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdR 371 (844)
...+....+.+.+ .. +. +..++|+|+|.+.|.+.. ...++++++||
T Consensus 158 i~~S~~~~~~~~~----~~------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YY------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----Hh------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 7777665555432 11 11 245789999998775421 23567999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHH
Q 003145 372 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 451 (844)
Q Consensus 372 ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~ 451 (844)
+.+.||++.+++|++++ | +.|+++|. +++.+.+++ ... ..|.| .|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l~~-------~~~--------~~V~~-~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRLRA-------KAG--------PNVTF-LGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHHHh-------hcC--------CCEEE-ecCCCHH
Confidence 99999999999999864 3 33777764 233323322 111 13664 8999999
Q ss_pred HHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCH
Q 003145 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 529 (844)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~ 529 (844)
++..+|+.||++++||. ||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999996 899999999988877 457999999999999999999998774
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHH
Q 003145 530 EEREKRHWHNFTHVTTHTAQEWAETF 555 (844)
Q Consensus 530 ~er~~r~~~~~~~v~~~~~~~W~~~f 555 (844)
...+.+++.++++++.+..+++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHHh
Confidence 1233445556677777766643
No 98
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.78 E-value=3.6e-18 Score=184.32 Aligned_cols=192 Identities=14% Similarity=0.130 Sum_probs=130.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+|++|+||||++.. ..+++.++++|++|.+ .|+.++|+|||+...+...+..+++ ++|++|
T Consensus 4 ~kli~~DlDGTLl~~~--------------~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDHH--------------TYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCCC--------------CcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 6899999999999852 3467889999999987 6999999999999999999998853 699999
Q ss_pred ceEEEecCC--------------eeeecccccCChHHHHHHHHHHHHHHhcCCCce-Eeec-------------------
Q 003145 669 GMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH-FEQR------------------- 714 (844)
Q Consensus 669 G~~i~~~~~--------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~-iE~k------------------- 714 (844)
|+++...++ .|... ...+ .+.+.++++.+.......+ +...
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIE--LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEE--cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999975222 23211 1122 2445555543322111000 0000
Q ss_pred ----cceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCC
Q 003145 715 ----ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 790 (844)
Q Consensus 715 ----~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~ 790 (844)
.....+-+.. + ......+...+ . ...+.+..++.++||.|.+ +||.|+++++++++ +++
T Consensus 144 ~~~~~~~~~~~~~~-~----~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLWNG-S----EAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceeecC-c----hHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 0000000000 0 01112222333 2 2246666677899999999 99999999999998 789
Q ss_pred -ceEEEEeeCCCch--hhc--cCcEEEeCCCCcch
Q 003145 791 -DYVLCIGHFLGKV--LLT--QFLIQVGSSINSLS 820 (844)
Q Consensus 791 -d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a 820 (844)
+.+++||| +.|| ||+ +++|+|+||.+++.
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 99999999 9999 999 99999999987654
No 99
>PLN02382 probable sucrose-phosphatase
Probab=99.78 E-value=1.6e-18 Score=196.48 Aligned_cols=206 Identities=17% Similarity=0.205 Sum_probs=134.2
Q ss_pred HhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHH-HHhhcCCCCcEEEEcCCChhhHHHhhccc----C
Q 003145 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY----N 661 (844)
Q Consensus 587 ~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l----~ 661 (844)
..+.+.||++|+||||++..+ ...++...+.+| +++.+ +|..++++|||+...+.++.+.+ +
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p 71 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTP 71 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCC
Confidence 456678899999999997631 234665566666 77776 69999999999988877776665 3
Q ss_pred ceEEeecceEEEecC-----CeeeecccccCChHHHH-HHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHH
Q 003145 662 LWLAAENGMFLRCTT-----GKWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQAR 735 (844)
Q Consensus 662 l~liaenG~~i~~~~-----~~w~~~~~~~~~~~w~~-~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~ 735 (844)
..+|+.||+.|...+ ..|...+ +..|.. .+.+.+..|....+....+.+...+.+.+...+ ......
T Consensus 72 ~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~---~~~~~~ 144 (413)
T PLN02382 72 DITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKKK---AQEVIK 144 (413)
T ss_pred CEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechHH---hHHHHH
Confidence 357888999997522 1232221 223332 122222222111112223344455555543211 111123
Q ss_pred HHHHHHhcCCCCCCCeEE-EEcCcEEEEEeCCCCHHHHHHHHHHHh---cccCcCCCCCceEEEEeeCCCch--hhc--c
Q 003145 736 DMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEI---VHSKKMKTAIDYVLCIGHFLGKV--LLT--Q 807 (844)
Q Consensus 736 el~~~L~~~~~~~~~~~v-~~g~~~vEV~p~gvnKG~al~~Ll~~l---~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g 807 (844)
++.+.+ .. ....+.+ .++..++||.|+++|||.|+++|++++ + ++++.+++||| +.|| ||+ +
T Consensus 145 ~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g------i~~~~~iafGD-s~NDleMl~~ag 214 (413)
T PLN02382 145 ELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG------KAPVNTLVCGD-SGNDAELFSVPD 214 (413)
T ss_pred HHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC------CChhcEEEEeC-CHHHHHHHhcCC
Confidence 333333 21 1223454 467889999999999999999999998 6 78899999999 9999 998 7
Q ss_pred -CcEEEeCCCCcchhh
Q 003145 808 -FLIQVGSSINSLSKE 822 (844)
Q Consensus 808 -~~Iavgna~~~~a~~ 822 (844)
++|+||||.+++.+.
T Consensus 215 ~~gvam~NA~~elk~~ 230 (413)
T PLN02382 215 VYGVMVSNAQEELLQW 230 (413)
T ss_pred CCEEEEcCCcHHHHHH
Confidence 799999999887653
No 100
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.77 E-value=3.6e-18 Score=178.40 Aligned_cols=186 Identities=16% Similarity=0.163 Sum_probs=120.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC---ceEEeecc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 669 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~---l~liaenG 669 (844)
+|++|+||||++.. ..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~~--------------~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCCC--------------CCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 58999999999762 2245559999999987 699999999999999999999885 46999999
Q ss_pred eEEEecCCeeeecc--c-ccCChHHHHHHHHHHHHHHhcCCC-ceEee-----------------------ccceEEEEe
Q 003145 670 MFLRCTTGKWMTTM--P-EHLNMEWVDSLKHVFEYFTERTPR-SHFEQ-----------------------RETSLVWNY 722 (844)
Q Consensus 670 ~~i~~~~~~w~~~~--~-~~~~~~w~~~v~~i~~~~~~rt~g-s~iE~-----------------------k~~sl~~hy 722 (844)
+.+.... .|+... . .....+| +.+.++++...+...- ..... +.....+..
T Consensus 66 a~i~~~~-~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (221)
T TIGR02463 66 AAIHLEE-LWREEPGYPRIILGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLW 143 (221)
T ss_pred cEEEcCc-ccccCCCceEEecCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEe
Confidence 9998521 111000 0 0011122 3344555433221000 00000 001111111
Q ss_pred ecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCc
Q 003145 723 KYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK 802 (844)
Q Consensus 723 ~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~n 802 (844)
. .+++ ...++.+.+ .. .++.+..+..++||.|++++||.|+++++++++ ++++++++||| +.|
T Consensus 144 ~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~~N 206 (221)
T TIGR02463 144 R-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-GPN 206 (221)
T ss_pred c-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-CHH
Confidence 0 0111 112222333 22 235666677899999999999999999999999 78999999999 999
Q ss_pred h--hhc--cCcEEE
Q 003145 803 V--LLT--QFLIQV 812 (844)
Q Consensus 803 D--Mf~--g~~Iav 812 (844)
| ||+ |++||+
T Consensus 207 Di~ml~~ag~~va~ 220 (221)
T TIGR02463 207 DLPLLEVADYAVVI 220 (221)
T ss_pred HHHHHHhCCceEEe
Confidence 9 998 888886
No 101
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.77 E-value=6.1e-17 Score=179.84 Aligned_cols=196 Identities=21% Similarity=0.322 Sum_probs=148.1
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccc--cCCHHHHHHHHHHHHHh-CcCCCCce
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 399 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~--~KGi~~~l~Af~~ll~~-~P~~~~~v 399 (844)
.++.++|+|||.+.|.+... ...++.+ .++++++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRDK--------REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCcH--------HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 47889999999988754211 1233333 34566666666654 89999999999988665 34 45
Q ss_pred EEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCC-HHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 400 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 400 ~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~-~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
.++++|... +.. . . .++ ..|. +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~----~~~-----~--~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD----PEI-----P--P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc----hhh-----h--c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 677776432 100 0 0 111 1255 478888 88999999999999999999999999999
Q ss_pred hhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHH
Q 003145 479 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 555 (844)
Q Consensus 479 ama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~f 555 (844)
||+|+ .|+|+|..+|..+.+ +.+|+++++.|.+++|++|.++++.+ +++.++.+++++.+ ..++++..++.+
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99996 799999998888887 34799999999999999999999854 46667777777777 568999999999
Q ss_pred HHHHHH
Q 003145 556 VSELND 561 (844)
Q Consensus 556 l~~l~~ 561 (844)
++.+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 877654
No 102
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.77 E-value=4.7e-17 Score=177.23 Aligned_cols=246 Identities=19% Similarity=0.141 Sum_probs=166.4
Q ss_pred CCCEEEEeCc-cchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDy-hl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
..|+|++|++ ...++..+.+. . +.++.+.+|..++.... ...+........+..+|.+.+.+....+.+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 4699999988 44444444443 3 78999999988754321 111111122334456888888776655554331
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
.+ ....++.++|+|+|.+.+.+.... .. . .....++.+|+++||+.+.||+..+++|+..+.
T Consensus 154 ~~-----------~~~~~~~vi~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LG-----------IPPDKIEVIYNPIDIEEIRALAEE-----PL-E-LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hc-----------CCccccEEecCCcChhhcCcccch-----hh-h-cCCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 11 013578899999998877643211 00 0 011246789999999999999999999999998
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCC
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~ 469 (844)
++.++ +.|+++|.+ +....++ +++.+.+.. ..|. +.+.. +++..+|+.||++++||..
T Consensus 216 ~~~~~----~~l~i~G~~-----~~~~~~~----~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGDG-----PLREELE----ALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcCC-----ccHHHHH----HHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77665 458877642 2222333 333343321 1244 46654 4688999999999999999
Q ss_pred cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH---HHHHHHhcC
Q 003145 470 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA---NAIARALNM 527 (844)
Q Consensus 470 EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A---~ai~~aL~m 527 (844)
||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|.++++ ++|..++..
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCC
Confidence 99999999999996 799999999988887 5679999999999995 455555443
No 103
>PLN02423 phosphomannomutase
Probab=99.76 E-value=4.8e-17 Score=172.52 Aligned_cols=210 Identities=15% Similarity=0.155 Sum_probs=130.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc-C---ceEEe
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 666 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l-~---l~lia 666 (844)
++++++|+||||++. +.+++++++++|++|.+ . +.|+++|||++..+.+.|+.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999976 35688999999999986 4 999999999999998888874 1 47899
Q ss_pred ecceEEEecCCeeeec--ccccCChHHHHHHHHHHHHHHhc-----CCCceEeeccceEEEEe--ecCChh----hh---
Q 003145 667 ENGMFLRCTTGKWMTT--MPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETSLVWNY--KYADVE----FG--- 730 (844)
Q Consensus 667 enG~~i~~~~~~w~~~--~~~~~~~~w~~~v~~i~~~~~~r-----t~gs~iE~k~~sl~~hy--~~~d~e----~~--- 730 (844)
+||+++...+ ++... ++...+.+-...+.+.++.+... ..+.+++..+..+.+.+ .++... +.
T Consensus 71 ~NGa~i~~~g-~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~ 149 (245)
T PLN02423 71 ENGLVAHKDG-KLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYD 149 (245)
T ss_pred CCceEEEeCC-EEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhC
Confidence 9999998533 33221 11223323333333333322111 12445543332222221 222100 00
Q ss_pred --HHHHHHHHHHHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch-
Q 003145 731 --RIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV- 803 (844)
Q Consensus 731 --~~qa~el~~~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD- 803 (844)
.....++.+.+ ...+.+..+.+. .|..++||+++|+|||.||+.|+ . +++++||||. +.||
T Consensus 150 ~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~ND~ 217 (245)
T PLN02423 150 KVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGNDH 217 (245)
T ss_pred ccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCCcH
Confidence 11123344444 332333334433 35689999999999999999997 2 6899999993 4899
Q ss_pred -hhccCcEEEeCCCCcchhhhcCCHHHHHHHHHHHh
Q 003145 804 -LLTQFLIQVGSSINSLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 804 -Mf~g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~~ 838 (844)
|++..+ +-.+.++++++.+++|+++.
T Consensus 218 eMl~~~~---------~~~~~~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 218 EIFESER---------TIGHTVTSPDDTREQCTALF 244 (245)
T ss_pred HHHhCCC---------cceEEeCCHHHHHHHHHHhc
Confidence 988211 12345677888888887763
No 104
>PLN02275 transferase, transferring glycosyl groups
Probab=99.75 E-value=1.7e-16 Score=178.95 Aligned_cols=241 Identities=12% Similarity=-0.019 Sum_probs=158.1
Q ss_pred CCCCEEEEeCccchh---HHHHHHhcCCCCeEEEEEecCCCChhhhhcC--C----ccHHHHHhh-hcCCEEEEecHHHH
Q 003145 230 KDGDVVWCHDYHLMF---LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--P----SRSDLLRAV-LAADLVGFHTYDYA 299 (844)
Q Consensus 230 ~~~DiVwvHDyhl~l---lp~~lr~~~~~~~i~~flH~Pfp~~e~~r~l--p----~r~~ll~~l-l~aDlIgf~t~~~~ 299 (844)
...|+|++|..+.+. .+.++. +..++|+.+.+|..+.+.-..... + ....+.+.+ -.+|.|...+....
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~ 177 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLAC-WLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQ 177 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHH-HHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 356999999877532 333333 334688888888753211000000 0 011122222 24788887776554
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+...+ . .|.. +.++|+| |.+.|.+.... ..++ .+...+++++||+.+.||+.
T Consensus 178 ~~l~~----~------------~g~~--i~vi~n~-~~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~~~ 229 (371)
T PLN02275 178 HELDQ----N------------WGIR--ATVLYDQ-PPEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDEDFG 229 (371)
T ss_pred HHHHH----h------------cCCC--eEEECCC-CHHHcCcCCch-------hccc--CCCcEEEEEeCceeccCCHH
Confidence 44322 0 1111 6788998 45777543110 0111 12345788999999999999
Q ss_pred HHHHHHHHHHH-----------------hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 380 QKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 380 ~~l~Af~~ll~-----------------~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
.+++|+..+.. ++|+ +.|+++|. |++.+++++ ++.+.+. ..++
T Consensus 230 ~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~~~l~~----~~~~~~l-------~~v~ 289 (371)
T PLN02275 230 ILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQKAMYEE----KISRLNL-------RHVA 289 (371)
T ss_pred HHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCHHHHHH----HHHHcCC-------CceE
Confidence 99999988742 2343 66888874 344444444 4443322 2477
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcC---CCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~ 517 (844)
++.+.++.++++.+|+.||+||+|+ ..|||+++++|||||| .|+|+|..+|..+.+ |.+|++|+ |++++
T Consensus 290 ~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~l 363 (371)
T PLN02275 290 FRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSSEL 363 (371)
T ss_pred EEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHHHH
Confidence 7777899999999999999999863 2489999999999996 799999998988887 66899996 69999
Q ss_pred HHHHHHHh
Q 003145 518 ANAIARAL 525 (844)
Q Consensus 518 A~ai~~aL 525 (844)
|++|.++|
T Consensus 364 a~~i~~l~ 371 (371)
T PLN02275 364 ADQLLELL 371 (371)
T ss_pred HHHHHHhC
Confidence 99998875
No 105
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4.6e-16 Score=177.45 Aligned_cols=300 Identities=22% Similarity=0.206 Sum_probs=207.4
Q ss_pred CCCEEEEeCccchhHHHHHHhc---CCCCeEEEEEecC-----CC-ChhhhhcCCc---c----------HHHHHhhhcC
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS---R----------SDLLRAVLAA 288 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~---~~~~~i~~flH~P-----fp-~~e~~r~lp~---r----------~~ll~~ll~a 288 (844)
.+|||++||||..|+|.++++. ...++.+|+.|.- |+ .......||. . .-+-.++..|
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5799999999999999999996 7789999999953 33 1122233441 1 2233456778
Q ss_pred CEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcC-----------CchHHHHHHHH
Q 003145 289 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQ 357 (844)
Q Consensus 289 DlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~-----------~~~~~~~~~lr 357 (844)
|.|..-++.|++.-.. ...|. .-...+.+ +..++.-|=+|||.+...|.... +.-.+....|.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888887766441 00000 00011112 22456777788887766553221 00112223455
Q ss_pred HHhC-----CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003145 358 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (844)
Q Consensus 358 ~~~~-----~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (844)
+.++ +.+++..|+||...||++.+++|+..++++. ..||++|.+ + + .++..+..++.++.++
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~g---d-~---~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTG---D-P---ELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecC---c-H---HHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999976 347777753 1 2 5677888888877653
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-c--------
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 503 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-g-------- 503 (844)
+. +.-..+..-...+|..||++++||..|++||+-++||.-| .++|+.+.+|.++.+ .
T Consensus 351 ~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 VL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred EE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 22 2334456666789999999999999999999999999986 799999999999977 2
Q ss_pred -CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhH
Q 003145 504 -AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 504 -~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~~ 563 (844)
.+|+++.|.|.++++.+|.+|+..-..... .++...... ..++|+.-+.++++-.+...
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHHh
Confidence 368999999999999999999975432111 022222222 46788888888887766554
No 106
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.73 E-value=9e-17 Score=186.53 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=129.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC--ceEEe
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAA 666 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~--l~lia 666 (844)
.++|+|++|+||||++.. ..++++++++|++|.+ .|+.|+++|||+...+..+++.++ .++|+
T Consensus 414 ~~~KLIfsDLDGTLLd~d--------------~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPL--------------TYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ceeeEEEEECcCCCcCCC--------------CccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 367999999999999863 3456789999999997 599999999999999999998885 46999
Q ss_pred ecceEEEecCCeee-------------ecccccCChHHHHHHHHHHHHHHhcCC----------CceEeecc--------
Q 003145 667 ENGMFLRCTTGKWM-------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRE-------- 715 (844)
Q Consensus 667 enG~~i~~~~~~w~-------------~~~~~~~~~~w~~~v~~i~~~~~~rt~----------gs~iE~k~-------- 715 (844)
+||+.+...++ |. .+.....+ .+.+.++++...+... +.++....
T Consensus 479 eNGA~I~~~~~-~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~ 554 (694)
T PRK14502 479 ENGGAIFIPKD-YFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVS 554 (694)
T ss_pred cCCCEEEECCC-cccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHH
Confidence 99999986332 11 01111222 2334444443322110 11111100
Q ss_pred -----------------ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHH
Q 003145 716 -----------------TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILA 778 (844)
Q Consensus 716 -----------------~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~ 778 (844)
.+..+.+.. + .....++.+.| . ...+.+..|..++||. .++|||.|++.|++
T Consensus 555 ~~TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L-~----~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e 623 (694)
T PRK14502 555 RLTDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHI-Q----QSGLEYSFGGRFYEVT-GGNDKGKAIKILNE 623 (694)
T ss_pred HhhCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHH-H----HcCcEEEECCEEEEeC-CCCCHHHHHHHHHH
Confidence 000000000 0 01123344444 2 2256677799999999 59999999999999
Q ss_pred HhcccCcCCCCCceEEEE--eeCCCch--hhc--cCcEEEeCCCCcc
Q 003145 779 EIVHSKKMKTAIDYVLCI--GHFLGKV--LLT--QFLIQVGSSINSL 819 (844)
Q Consensus 779 ~l~~~~~~~~~~d~vlai--GD~~~nD--Mf~--g~~Iavgna~~~~ 819 (844)
.++ ++.+.+++| || +.|| ||+ +++|+|++...+.
T Consensus 624 ~~g------I~~~eViafalGD-s~NDisMLe~Ag~gVAM~~~~~~~ 663 (694)
T PRK14502 624 LFR------LNFGNIHTFGLGD-SENDYSMLETVDSPILVQRPGNKW 663 (694)
T ss_pred HhC------CCccceEEEEcCC-cHhhHHHHHhCCceEEEcCCCCCC
Confidence 998 667888888 99 9999 999 9999999865543
No 107
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.72 E-value=1.8e-17 Score=175.89 Aligned_cols=218 Identities=18% Similarity=0.268 Sum_probs=137.9
Q ss_pred CeEEEEecCCccC-CCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEE
Q 003145 591 NRLLILGFNATLT-EPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 665 (844)
Q Consensus 591 ~rLi~lD~DGTL~-~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~li 665 (844)
++||++|+||||+ .+ ..-.+++.+.|+ ....++..++++|||+...+.+.+...+ .++|
T Consensus 2 ~~ll~sDlD~Tl~~~~---------------~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I 65 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGD---------------DEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYII 65 (247)
T ss_dssp SEEEEEETBTTTBHCH---------------HHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEE
T ss_pred CEEEEEECCCCCcCCC---------------HHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEE
Confidence 5899999999999 22 112355666666 3334789999999999999998888763 4799
Q ss_pred eecceEEEecC-----CeeeecccccCChHHH-HHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHH
Q 003145 666 AENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQ 739 (844)
Q Consensus 666 aenG~~i~~~~-----~~w~~~~~~~~~~~w~-~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~ 739 (844)
+.+|+.|.... ..|...+ +..|. +.+.+++..+..-.+..-.+.....+.|.+...+.. ....++.+
T Consensus 66 ~svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~ 138 (247)
T PF05116_consen 66 TSVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRA 138 (247)
T ss_dssp ETTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHH
T ss_pred ecCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHH
Confidence 99999998622 1243222 22343 345555544432111111223344566666544332 11344555
Q ss_pred HHhcCCCCCCCeEEE-EcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC
Q 003145 740 HLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS 814 (844)
Q Consensus 740 ~L~~~~~~~~~~~v~-~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn 814 (844)
.+ .. .+..+.++ ++...++|.|+++|||.|+++|+++++ ++.+.++++|| +.|| ||. ..+|.|||
T Consensus 139 ~l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~~~~vvV~N 208 (247)
T PF05116_consen 139 RL-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGGDHGVVVGN 208 (247)
T ss_dssp HH-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCSSEEEE-TT
T ss_pred HH-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCcCCEEEEcC
Confidence 55 22 23345555 467899999999999999999999998 78899999999 8899 999 57999999
Q ss_pred CCCcchhh-----------hcCCHHHHHHHHHHHhhcc
Q 003145 815 SINSLSKE-----------KKRKVHQLFGIFLRFSYSG 841 (844)
Q Consensus 815 a~~~~a~~-----------~l~~~~~v~~~l~~~~~~~ 841 (844)
+.+++.+. .+++-+-..++|+.|-..|
T Consensus 209 a~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~~~ 246 (247)
T PF05116_consen 209 AQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQHFG 246 (247)
T ss_dssp S-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHHcC
Confidence 98881111 2455566677888887766
No 108
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.70 E-value=2.8e-15 Score=172.01 Aligned_cols=285 Identities=15% Similarity=0.132 Sum_probs=175.3
Q ss_pred HHHHhhCCCCCEEEEeCccchhHHHHHHh-cCCCCeEEEEEecCCC-ChhhhhcCCccHHHHHhhh-cCCEEEEecHHHH
Q 003145 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 299 (844)
Q Consensus 223 ~~i~~~~~~~DiVwvHDyhl~llp~~lr~-~~~~~~i~~flH~Pfp-~~e~~r~lp~r~~ll~~ll-~aDlIgf~t~~~~ 299 (844)
.++.+..+| |+|++|.+.++ |.++.. +..++|+.+..|.-.. +...++.+ ..+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHHHH
Confidence 334455565 89998877765 444432 2336777766554222 12222211 23333333 4799999998877
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 378 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi 378 (844)
+.+.+ +|.. .. +.++|++ +.+.+.+. ........+++.+ +++++++++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 77653 2221 22 4566653 33322111 0112234566666 678899999875 6889
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHHhhcc---cCC--C--CcccEEEeCCCCCH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGR---FGT--L--TAVPIHHLDRSLDF 450 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~-~~l~~~l~~lv~~IN~~---~g~--~--~~~pv~~~~~~v~~ 450 (844)
..+|+||.++++++|+++ |+++| ++++. ++++ +++.+.+-. +.. . .-..|. +.+ +.
T Consensus 247 ~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~----~~~~~~gl~~~~~~~~~~~~~~~~v~-l~~--~~ 310 (425)
T PRK05749 247 ELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVE----ELLKKAGLSYVRRSQGEPPSADTDVL-LGD--TM 310 (425)
T ss_pred HHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHH----HHHHhCCCcEEEccCCCCCCCCCcEE-EEe--cH
Confidence 999999999988888754 77664 34443 3444 344332221 100 0 000122 222 35
Q ss_pred HHHHHHHHhCcEEEE-cCCCcCCChhHhhhhhcccCCCceEEEeCCCCch-h---hccCCeEEECCCCHHHHHHHHHHHh
Q 003145 451 PALCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-Q---SLGAGAILVNPWNITEVANAIARAL 525 (844)
Q Consensus 451 ~el~aly~~ADv~v~-~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~-~---~lg~~g~lvnP~d~~~~A~ai~~aL 525 (844)
.++..+|+.||++++ +|+.||+|++++|||||| .|+|++...|.. + .+..+|.++.|.|++++|++|.+++
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 799999999999665 688899999999999996 788877654322 2 2235688888999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 526 NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 526 ~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
++ ++.+.++.+++++++.++. .-+++.++.+.
T Consensus 387 ~~-~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 387 TD-PDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred cC-HHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 85 4577888888888887652 33344444443
No 109
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.69 E-value=2.6e-16 Score=156.94 Aligned_cols=156 Identities=27% Similarity=0.356 Sum_probs=119.8
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHHHh-CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 361 ~~~~vil~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
.++++|+++||+++.||+..+++|+..+.++ .|+ +.|+++|. ++.. ..+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cccc----ccccccccccccc------c
Confidence 4789999999999999999999999999875 554 55777762 1222 2233333333221 1
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHH
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 517 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~ 517 (844)
.|.+ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3665 677779999999999999999999999999999999996 799999988888777 557899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q 003145 518 ANAIARALNMSPEEREKRHWHNFT 541 (844)
Q Consensus 518 A~ai~~aL~m~~~er~~r~~~~~~ 541 (844)
+++|.+++.++ +.+..+.+++++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999976 455555555544
No 110
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.67 E-value=3.2e-16 Score=164.17 Aligned_cols=187 Identities=17% Similarity=0.170 Sum_probs=117.7
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeecce
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 670 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaenG~ 670 (844)
+|++|+||||++.. .++++++++|++|.+ .|+.|+++|||+...+..++.++++ ++|++||+
T Consensus 1 li~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPPG---------------YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCCC---------------CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 58999999999852 245679999999998 5999999999999999999988864 79999999
Q ss_pred EEEecCC-------------eeeecccccCChHHHHHHHHHHHHHHhcCCCceEee---ccceEEEEeecCChhh-----
Q 003145 671 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQ---RETSLVWNYKYADVEF----- 729 (844)
Q Consensus 671 ~i~~~~~-------------~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~---k~~sl~~hy~~~d~e~----- 729 (844)
++..... .. .++....+ .+.+.++++...++.+-.++.. ...+ .+....+..
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~-~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 137 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNY-EVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVE---KLTGLPRELAPLAK 137 (225)
T ss_pred EEEecCccccccccccccCCCe-EEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHH---HHHCcCHHHHHHHH
Confidence 9986321 11 01111223 2334444443322111110000 0000 000000000
Q ss_pred ----------h-HHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 730 ----------G-RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 730 ----------~-~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
+ ..+..++.+.+ . ...+.+.++..++++. .++|||.|++.+++.++. ..+...+++|||
T Consensus 138 ~~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~----~~~~~~~i~~GD 207 (225)
T TIGR02461 138 RREYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKL----RPGAIESVGLGD 207 (225)
T ss_pred hhhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhcc----ccCcccEEEEcC
Confidence 0 01112333333 2 2346777777778864 599999999999998862 124568999999
Q ss_pred CCCch--hhc--cCcEEEe
Q 003145 799 FLGKV--LLT--QFLIQVG 813 (844)
Q Consensus 799 ~~~nD--Mf~--g~~Iavg 813 (844)
+.|| ||+ +++|+||
T Consensus 208 -~~nD~~ml~~ag~~v~v~ 225 (225)
T TIGR02461 208 -SENDFPMFEVVDLAFLVG 225 (225)
T ss_pred -CHHHHHHHHhCCCcEecC
Confidence 9999 999 8999887
No 111
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.64 E-value=4.9e-15 Score=156.75 Aligned_cols=191 Identities=15% Similarity=0.123 Sum_probs=126.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeec
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAEN 668 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaen 668 (844)
.|+||+|+||||++.. ...++.++++|++|.+ .|+.|+++|||....+..+++.+++ ++|++|
T Consensus 1 ~KLIftDLDGTLLd~~--------------~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDLE--------------FNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCCC--------------CcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 4799999999999862 3467889999999998 5999999999999999999998854 799999
Q ss_pred ceEEEecCCeeeec--------c-cc-------cCChHHHHHHHHHHHHHHhcCC--------------CceE------e
Q 003145 669 GMFLRCTTGKWMTT--------M-PE-------HLNMEWVDSLKHVFEYFTERTP--------------RSHF------E 712 (844)
Q Consensus 669 G~~i~~~~~~w~~~--------~-~~-------~~~~~w~~~v~~i~~~~~~rt~--------------gs~i------E 712 (844)
|+.|..... |... . +. ..-..|+..+.++-+.+..... |... .
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985322 3210 0 00 0012334433333332211111 1111 1
Q ss_pred eccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEe------------------C---CCCHHH
Q 003145 713 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 771 (844)
Q Consensus 713 ~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p------------------~---gvnKG~ 771 (844)
.+++|-.+.+...+... .+.+ ...++.+++|..++.+.. . +++||.
T Consensus 145 ~Re~SEp~~w~~~~~~~--------~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPARL--------REAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHHH--------HHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 23455555554432211 2223 223678889888887776 5 899999
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
|++.|.+.+.... ..=.++++|| +.|| |++ .++|.|-+.
T Consensus 212 A~~~L~~~y~~~~----~~~~tiaLGD-spND~~mLe~~D~~vvi~~~ 254 (302)
T PRK12702 212 AVQLLLDCYQRHL----GPIKALGIGC-SPPDLAFLRWSEQKVVLPSP 254 (302)
T ss_pred HHHHHHHHHHhcc----CCceEEEecC-ChhhHHHHHhCCeeEEecCC
Confidence 9999999887210 1227899999 9999 999 678877554
No 112
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.60 E-value=2e-14 Score=152.48 Aligned_cols=202 Identities=15% Similarity=0.153 Sum_probs=147.5
Q ss_pred eEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEE
Q 003145 324 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 402 (844)
Q Consensus 324 ~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv 402 (844)
...+|.++|+.|+++.|.|.... +. .+...|+.++||-|+||++.+++.+.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999884321 12 345889999999999999999999999999999865 87
Q ss_pred EEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 403 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 403 ~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
++| |||..-.+++-+++. +- ..++. +.|.++++++...|...|||+.||+.|.||++++||++|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 775 556544445444433 11 12566 489999999999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 561 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 561 (844)
| .++|.+..+|..+.|-++-+...+-+++++++++.++++.-... -....+.+ +-++|..-+++-..-..+
T Consensus 295 G----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~~~~~----p~~~h~~v~~~y~w~dVa~rTekvy~r 366 (426)
T KOG1111|consen 295 G----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITKLRTL----PLEFHDRVKKMYSWKDVAERTEKVYDR 366 (426)
T ss_pred C----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHHhccC----chhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 5 67777888888888833324455667899999999988632111 01112223 235666666666555555
Q ss_pred hHHH
Q 003145 562 TVVE 565 (844)
Q Consensus 562 ~~~~ 565 (844)
+.+.
T Consensus 367 ~~~t 370 (426)
T KOG1111|consen 367 AATT 370 (426)
T ss_pred Hhhc
Confidence 5443
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.59 E-value=2e-13 Score=154.14 Aligned_cols=264 Identities=17% Similarity=0.133 Sum_probs=164.1
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHH-HhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll-~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+..++|.+..-...+... .+..++++-+|-.|+..... -+....+. ..+-.||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~----- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR----- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh-----
Confidence 556778875544444444 45677777766544432110 01111122 2234689988777655433211
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll 389 (844)
+ + .++.++|+|+|.+.|.+....+.. ...+ ...++++|+++|++.+.+++. +|.++ .
T Consensus 171 -----------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l---a 227 (373)
T cd04950 171 -----------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL---A 227 (373)
T ss_pred -----------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---H
Confidence 1 1 357889999999999764321110 0111 114678999999999966654 44443 3
Q ss_pred HhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-
Q 003145 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (844)
Q Consensus 390 ~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~- 468 (844)
+.+|+++ |++||... ... +. .++ .. ...|++ .|.++.+++.++|+.||++++|+.
T Consensus 228 ~~~p~~~----~vliG~~~--~~~---~~----~~~----~~------~~nV~~-~G~~~~~~l~~~l~~~Dv~l~P~~~ 283 (373)
T cd04950 228 KARPDWS----FVLIGPVD--VSI---DP----SAL----LR------LPNVHY-LGPKPYKELPAYLAGFDVAILPFRL 283 (373)
T ss_pred HHCCCCE----EEEECCCc--Ccc---Ch----hHh----cc------CCCEEE-eCCCCHHHHHHHHHhCCEEecCCcc
Confidence 4577764 88787431 000 00 111 00 123664 799999999999999999999986
Q ss_pred ----CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 003145 469 ----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (844)
Q Consensus 469 ----~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~ 544 (844)
.+++++.++|||||| .|+|.|....+.+. +.+++ +.+.|+++++++|.++|..+..++..+. ...++
T Consensus 284 ~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~-~~~~~-~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~~ 354 (373)
T cd04950 284 NELTRATSPLKLFEYLAAG----KPVVATPLPEVRRY-EDEVV-LIADDPEEFVAAIEKALLEDGPARERRR---LRLAA 354 (373)
T ss_pred chhhhcCCcchHHHHhccC----CCEEecCcHHHHhh-cCcEE-EeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHHH
Confidence 357899999999996 78887775544333 23344 4467999999999998765543433322 22688
Q ss_pred hcCHHHHHHHHHHHHHH
Q 003145 545 THTAQEWAETFVSELND 561 (844)
Q Consensus 545 ~~~~~~W~~~fl~~l~~ 561 (844)
+|||+.=++.++..|..
T Consensus 355 ~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 355 QNSWDARAAEMLEALQE 371 (373)
T ss_pred HCCHHHHHHHHHHHHHh
Confidence 99999999988866653
No 114
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.51 E-value=2.7e-12 Score=145.31 Aligned_cols=194 Identities=10% Similarity=0.054 Sum_probs=129.0
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHHHHHh----CcCCCCc
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGK 398 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~----~P~~~~~ 398 (844)
.+|.+++++||.+.+.+. . ....+|+++ +++++|+.+||....|++..+++++..++.. .|+
T Consensus 173 ~ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~---- 241 (382)
T PLN02605 173 SQIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI---- 241 (382)
T ss_pred HHEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC----
Confidence 467778899987543321 1 122456666 3678999999999999999999999876521 233
Q ss_pred eEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhh
Q 003145 399 VVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYE 478 (844)
Q Consensus 399 v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~E 478 (844)
+.++++++. ++ .++++++++.. + ..|. +.|.++ ++..+|++||++|.+| .|++++|
T Consensus 242 ~~~~vi~G~----~~---~~~~~L~~~~~--~--------~~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~E 297 (382)
T PLN02605 242 GQVVVICGR----NK---KLQSKLESRDW--K--------IPVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIAE 297 (382)
T ss_pred ceEEEEECC----CH---HHHHHHHhhcc--c--------CCeE-EEeccc--cHHHHHHhCCEEEECC----CcchHHH
Confidence 333334421 22 22333333210 1 1355 467764 7999999999999866 3789999
Q ss_pred hhhcccCCCceEEEeCC-----CCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 479 FVACQDLKKGVLILSEF-----AGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 479 ama~~~~~~g~lVlSe~-----~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
||||+ .|+|++.. .|.++.+-.+|.-+.+.|+++++++|.++|.++++.++++.+++++....+.+..-++
T Consensus 298 Ama~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~ 373 (382)
T PLN02605 298 ALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVH 373 (382)
T ss_pred HHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 99996 79999875 2334444123333345899999999999999755677777777788877777666666
Q ss_pred HHHHH
Q 003145 554 TFVSE 558 (844)
Q Consensus 554 ~fl~~ 558 (844)
.+++.
T Consensus 374 ~l~~~ 378 (382)
T PLN02605 374 DLHEL 378 (382)
T ss_pred HHHHH
Confidence 55443
No 115
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.48 E-value=2.3e-12 Score=145.38 Aligned_cols=220 Identities=15% Similarity=0.130 Sum_probs=157.3
Q ss_pred EEEEecccChhHHhhhhcCCchHHHHHHHHHH--h-CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCC-CceEEEE
Q 003145 328 VAAFPIGIDSERFIRALEINPVQVHIKELQET--F-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQ 403 (844)
Q Consensus 328 v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~--~-~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~-~~v~Lv~ 403 (844)
+.+...+||.+.+.+...... .+.....|.. . ..+.++..+-|+.|-||+...|.||..+...-|+.. ....++.
T Consensus 236 ~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~ 314 (495)
T KOG0853|consen 236 ITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGVSGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVV 314 (495)
T ss_pred cceeeccccchhccccccccc-hhcccccceeeeecccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEE
Confidence 556677788776653111000 0000011111 1 237888999999999999999999999988775411 1344554
Q ss_pred EEcC-CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhc
Q 003145 404 IAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (844)
Q Consensus 404 i~~p-~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~ 482 (844)
.+.+ +.+...+..++..++.+++++.+. +| .+++|....++.+...++..+.+.+.++..|.||+|++|||||
T Consensus 315 ~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~ 388 (495)
T KOG0853|consen 315 AGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC 388 (495)
T ss_pred ecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc
Confidence 5532 333344555556677777766432 12 2455677888888888889999999999889999999999999
Q ss_pred ccCCCceEEEeCCCCchhhc--cCCeEEECCCCHH---HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHHH
Q 003145 483 QDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFV 556 (844)
Q Consensus 483 ~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 556 (844)
+ .|+|++..+|..|.+ |.+|++++| +.+ .+|++|.++.+++. .+.++.+.++++|++ |+|+...+++.
T Consensus 389 g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~ 462 (495)
T KOG0853|consen 389 G----LPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIA 462 (495)
T ss_pred C----CCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 6 899999999999988 789999999 666 59999999998765 588888999999977 88866555555
Q ss_pred HHHH
Q 003145 557 SELN 560 (844)
Q Consensus 557 ~~l~ 560 (844)
+-+.
T Consensus 463 ~~~~ 466 (495)
T KOG0853|consen 463 SVLG 466 (495)
T ss_pred HHhH
Confidence 5444
No 116
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.40 E-value=1.2e-10 Score=123.17 Aligned_cols=310 Identities=12% Similarity=0.185 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHHh---hCC-CCCEEEE--eCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh
Q 003145 211 FAAYIKANQMFADVVNK---HYK-DGDVVWC--HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~---~~~-~~DiVwv--HDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ 284 (844)
|..+--.-|+.+..|+. +++ |+|+ || -.|.+. +|.+-+ +.+.|||...|.|--|.+++..+-.|..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pdi-~IDtMGY~fs-~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPDI-FIDTMGYPFS-YPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCchh-eEecCCCcch-hHHHHH--HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 44444444444444432 234 5564 66 445443 343322 45799999999999888877654432111 1
Q ss_pred hhcCCEEEEecHHHHHHHHHH------HHHHhCcccC--CCce-e-eCCeEEEEEEEecccChhHHhhhhcCCchHHHHH
Q 003145 285 VLAADLVGFHTYDYARHFVSA------CTRILGFEGT--PEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 354 (844)
Q Consensus 285 ll~aDlIgf~t~~~~~~Fl~~------~~~~l~~~~~--~~~v-~-~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~ 354 (844)
+ ..+----|-|.|..- |..+.-+..+ .+.+ + ++. ..+.++.+-.+++.+.....++
T Consensus 200 ~-----l~~~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~~te------- 265 (465)
T KOG1387|consen 200 I-----LVWGKLAYWRLFALLYQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKFGTE------- 265 (465)
T ss_pred h-----hhhHHHHHHHHHHHHHHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHhccc-------
Confidence 1 111112344444321 1111111110 1111 1 222 2344444446766554332210
Q ss_pred HHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcC--CCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003145 355 ELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 432 (844)
Q Consensus 355 ~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~--~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~ 432 (844)
-+....+|+++.+.|.|+.. .|+-++.++.+.|. ....+.|+++| .+|+.. ++ +.-..++.++.+++-.
T Consensus 266 -----~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D~-ervk~Lkd~a~~L~i~ 336 (465)
T KOG1387|consen 266 -----GERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-DE-ERVKSLKDLAEELKIP 336 (465)
T ss_pred -----CCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-hH-HHHHHHHHHHHhcCCc
Confidence 12457899999999999999 78888888888887 44568888776 466542 22 2334566666666643
Q ss_pred cCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh-hc----c-CCe
Q 003145 433 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL----G-AGA 506 (844)
Q Consensus 433 ~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~-~l----g-~~g 506 (844)
..|.| .-+++.+++..+|..|.+.+.+-..|-||+.+.||||+| ..+|+-..+|..- ++ | .+|
T Consensus 337 ------~~v~F-~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG----lIpi~h~SgGP~lDIV~~~~G~~tG 405 (465)
T KOG1387|consen 337 ------KHVQF-EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG----LIPIVHNSGGPLLDIVTPWDGETTG 405 (465)
T ss_pred ------cceEE-EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC----ceEEEeCCCCCceeeeeccCCccce
Confidence 13664 788999999999999999999999999999999999994 3444444444332 22 4 468
Q ss_pred EEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Q 003145 507 ILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 562 (844)
++. -+.++.|++|.+++.+..++|..+.+.++..+.+++-+...++|.+.+...
T Consensus 406 Fla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 406 FLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 887 367899999999999999999888888899999999999888888666554
No 117
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.39 E-value=2.9e-11 Score=130.27 Aligned_cols=199 Identities=25% Similarity=0.336 Sum_probs=145.3
Q ss_pred EEEEEecccChhHHhhh-hcCCchHHHHHHHHHHhCC--CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEE
Q 003145 327 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (844)
Q Consensus 327 ~v~v~P~GID~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~ 403 (844)
++.++|+|+|.+.+... ... ..+ ..+++++||+.+.||+...++|+..+....++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIGL-------------LPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccCC-------------CcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 57788999999987642 000 012 36899999999999999999999999877665 45766
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcc
Q 003145 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (844)
Q Consensus 404 i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~ 483 (844)
+|..... ...+.. ++...+.. ..|.+ .|.++.+++..+|+.||++++||..||||++++|||+||
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6643211 112222 33333221 13554 888888899999999999999999999999999999996
Q ss_pred cCCCceEEEeCCCCchhhccCC--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHH
Q 003145 484 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 560 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~--g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 560 (844)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-+..++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 788999999888888433 88888888999999999999887 34444444344444 57888887776666555
Q ss_pred Hh
Q 003145 561 DT 562 (844)
Q Consensus 561 ~~ 562 (844)
..
T Consensus 376 ~~ 377 (381)
T COG0438 376 EL 377 (381)
T ss_pred HH
Confidence 43
No 118
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.36 E-value=2.2e-10 Score=129.50 Aligned_cols=270 Identities=13% Similarity=0.078 Sum_probs=160.9
Q ss_pred HHHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHH
Q 003145 222 ADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 301 (844)
Q Consensus 222 a~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~ 301 (844)
..++.+..+| |+|+.| +....++.+.+....++|+...+ +.|-. + ...+. -.+|.+...+....+.
T Consensus 96 l~~~l~~~~p-D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~-------~-~~~~~---~~ad~i~~~s~~~~~~ 161 (380)
T PRK13609 96 LKLLLQAEKP-DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCL-------H-KIWVH---REVDRYFVATDHVKKV 161 (380)
T ss_pred HHHHHHHhCc-CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCC-------C-ccccc---CCCCEEEECCHHHHHH
Confidence 3444444554 899885 55556776666655667765333 22211 0 01111 1578888777654444
Q ss_pred HHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC---CCc-EEEEEecccccCC
Q 003145 302 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKG 377 (844)
Q Consensus 302 Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vil~VdRld~~KG 377 (844)
+.+ .|.+ ..++.++++.++. .|.+.. + ...++++++ +++ +++..|++...||
T Consensus 162 l~~-----~gi~-----------~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~ 217 (380)
T PRK13609 162 LVD-----IGVP-----------PEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGN 217 (380)
T ss_pred HHH-----cCCC-----------hhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcC
Confidence 332 1211 2244454443432 343211 1 123455552 444 4556789999999
Q ss_pred HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHH
Q 003145 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (844)
Q Consensus 378 i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly 457 (844)
+..+++++.. .|+ +.+++++++ +.+ +++++++++...+ ..|++ .|.+ +++..+|
T Consensus 218 ~~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~--~~~~~l~ 271 (380)
T PRK13609 218 VKELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYV--ENIDELF 271 (380)
T ss_pred HHHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eech--hhHHHHH
Confidence 9998888742 354 446666532 222 2344444443322 13665 5766 4688999
Q ss_pred HhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC-CCCc----hhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHH
Q 003145 458 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGA----AQSLGAGAILVNPWNITEVANAIARALNMSPEER 532 (844)
Q Consensus 458 ~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-~~G~----~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er 532 (844)
+.||+++. ++.|++++|||||+ .|+|++. ..|. +..+...|..+.+.|.++++++|.++++++ +.+
T Consensus 272 ~~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~ 342 (380)
T PRK13609 272 RVTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKL 342 (380)
T ss_pred HhccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHH
Confidence 99999874 45589999999996 7888875 3442 122323455555789999999999999864 466
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhHH
Q 003145 533 EKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (844)
Q Consensus 533 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 564 (844)
.++.++.++....++++..++.+++.+....+
T Consensus 343 ~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~~ 374 (380)
T PRK13609 343 LQMKEAMKSLYLPEPADHIVDDILAENHVEPN 374 (380)
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHhhhhhhh
Confidence 66666667777778899999888877665543
No 119
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.31 E-value=1.2e-10 Score=130.45 Aligned_cols=252 Identities=15% Similarity=0.068 Sum_probs=158.2
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHh
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l 310 (844)
..|+|+.|.....+.+.++ .+..+.|+.++.|..+|... +.++- ..+|.+...++.- +.
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~~--------~r~~~--~~~d~ii~~~~~~---~~------- 149 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGLA--------NKLLA--RFAKKVATAFPGA---FP------- 149 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccHH--------HHHHH--HHhchheECchhh---hh-------
Confidence 3699999985544444433 34457788876665444210 11111 1345554433311 00
Q ss_pred CcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHHH-HHHHHH
Q 003145 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 388 (844)
Q Consensus 311 ~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~l-~Af~~l 388 (844)
+....++.++|+|||.+.+.+. .. . ..+ .. .+.++|+.+++....|++..++ +|+.++
T Consensus 150 -----------~~~~~~i~vi~n~v~~~~~~~~----~~-~--~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 150 -----------EFFKPKAVVTGNPVREEILALA----AP-P--ARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred -----------ccCCCCEEEECCCCChHhhccc----ch-h--hhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 0123478999999998766431 10 0 011 11 3677889999999999987776 888877
Q ss_pred HHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC
Q 003145 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (844)
Q Consensus 389 l~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~ 468 (844)
... | ..++++|. ++ .+++.+.+ . .+ . .|. +.+.+ +++..+|..||+++.+|
T Consensus 210 ~~~-~-----~~~~~~G~-----g~-~~~~~~~~----~-~~-------~-~v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PEA-L-----QVIHQTGK-----GD-LEEVRAAY----A-AG-------I-NAE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hhC-c-----EEEEEcCC-----Cc-HHHHHHHh----h-cC-------C-cEE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 432 2 33555543 22 12232222 1 11 1 144 35665 68999999999999877
Q ss_pred CcCCChhHhhhhhcccCCCceEEEeCCCC--------chhhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 003145 469 RDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 536 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~~~~~g~lVlSe~~G--------~~~~l--g~~g~lvnP~d--~~~~A~ai~~aL~m~~~er~~r~ 536 (844)
| +.+++|||+|+ .|+|++...| .++.+ +..|++++|.| +++++++|.+++++ ++.+.++.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999996 6777765432 12334 34688998888 99999999999997 45777777
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 003145 537 WHNFTHVTTHTAQEWAETFVSELN 560 (844)
Q Consensus 537 ~~~~~~v~~~~~~~W~~~fl~~l~ 560 (844)
+.++++.+.++...-++.+++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777888888888888877776553
No 120
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=2.3e-10 Score=127.40 Aligned_cols=247 Identities=17% Similarity=0.147 Sum_probs=149.9
Q ss_pred HHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
+.+..+ .|+|+.|.....+ +..+..+..++|+.++.|..||. .. +.++ ...+|.|...+....+.
T Consensus 84 ~i~~~~-pDvI~~~~~~~~~-~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~--- 148 (350)
T cd03785 84 ILKKFK-PDVVVGFGGYVSG-PVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY--- 148 (350)
T ss_pred HHHhcC-CCEEEECCCCcch-HHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc---
Confidence 334344 5999998755433 33333344467777655555542 10 1111 11267776655432211
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCcEEEEEecccccCCHHHH
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 381 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VdRld~~KGi~~~ 381 (844)
-...++.++|+|+|.+.+.+.. . ++++ .++++|+.+++....|+...+
T Consensus 149 ------------------~~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 199 (350)
T cd03785 149 ------------------FPKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINEA 199 (350)
T ss_pred ------------------CCCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHHH
Confidence 0124678899999988775321 0 2333 357788888888778887765
Q ss_pred H-HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC
Q 003145 382 L-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (844)
Q Consensus 382 l-~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 460 (844)
+ +|++.+.+ ++ +.++.++++ + +.+++++.++ +. + ..|++ .+.+ +++..+|+.|
T Consensus 200 l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~l~~~~~----~~----~----~~v~~-~g~~--~~~~~~l~~a 253 (350)
T cd03785 200 VPEALAELLR--KR----LQVIHQTGK----G-DLEEVKKAYE----EL----G----VNYEV-FPFI--DDMAAAYAAA 253 (350)
T ss_pred HHHHHHHhhc--cC----eEEEEEcCC----c-cHHHHHHHHh----cc----C----CCeEE-eehh--hhHHHHHHhc
Confidence 5 77776642 22 334333321 2 2233443332 21 1 12553 5555 7899999999
Q ss_pred cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC--------chhhc--cCCeEEECCC--CHHHHHHHHHHHhcCC
Q 003145 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG--------AAQSL--GAGAILVNPW--NITEVANAIARALNMS 528 (844)
Q Consensus 461 Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G--------~~~~l--g~~g~lvnP~--d~~~~A~ai~~aL~m~ 528 (844)
|+++.+| | +.+++|||+|+ .|+|++...+ .++.+ +..|++++|. |.++++++|.++++.
T Consensus 254 d~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~- 324 (350)
T cd03785 254 DLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD- 324 (350)
T ss_pred CEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-
Confidence 9999877 3 57899999996 6788775543 13444 3468999987 899999999999974
Q ss_pred HHHHHHHHHHHHHHHHhcCHHH
Q 003145 529 PEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 529 ~~er~~r~~~~~~~v~~~~~~~ 550 (844)
++.+.++..++++++..+...+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 325 PERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred HHHHHHHHHHHHhcCCCCHHHH
Confidence 5566667777777766555443
No 121
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.29 E-value=7.2e-11 Score=121.23 Aligned_cols=118 Identities=27% Similarity=0.320 Sum_probs=85.8
Q ss_pred EEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCC
Q 003145 368 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 447 (844)
Q Consensus 368 ~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~ 447 (844)
++||+.+.||+..+++|+..+.++.|+ +.|+++|... + .. ..+..+.+. +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~--~-~~--~~~~~~~~~--------~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGP--E-RE--YLEELLAAL--------LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCC--C-hH--HHHHHHHhc--------CC--cccEEE-eCC
Confidence 999999999999999999999888775 4588887532 1 11 111111111 11 124665 555
Q ss_pred C-CHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEE
Q 003145 448 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 509 (844)
Q Consensus 448 v-~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lv 509 (844)
+ +.+++..+++.||+++.||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666777777999999999999999999999996 899999999888766 4456653
No 122
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.22 E-value=6.2e-10 Score=123.82 Aligned_cols=181 Identities=15% Similarity=0.115 Sum_probs=118.0
Q ss_pred EEEecccChhHHhhhhcCCchHHHHHHHHHHh-CCCcEEEEEecccccCCHHHH-HHHHHHHHHhCcCCCCceEEEEEEc
Q 003145 329 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 406 (844)
Q Consensus 329 ~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VdRld~~KGi~~~-l~Af~~ll~~~P~~~~~v~Lv~i~~ 406 (844)
.++|+|||...+.+. .. ...+ .+ .+.++|+++||....|++... ++|++++.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~---~~----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---VP----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc---ch----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 688999997665421 10 0111 12 367789999998888987664 4788776542 22 2333332
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCC
Q 003145 407 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 486 (844)
Q Consensus 407 p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~ 486 (844)
+++. +++ ++.+.+.+. ..+..+. ..++..+|+.||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-~~l----~~~~~~~~l-------~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EKV----KNVYQELGI-------EAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HHH----HHHHhhCCc-------eEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 333 333333221 1233223 237899999999999875 4 68999999996
Q ss_pred CceEEEeCCCCch-------hhc--cCCeEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHH
Q 003145 487 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (844)
Q Consensus 487 ~g~lVlSe~~G~~-------~~l--g~~g~lvnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (844)
.|+|++...|.. +.+ +.+|++++|.| +++++++|.++++. ++.++++.+++++++..+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 788888765532 344 45799998876 99999999999975 5567777778888777776666654
No 123
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.22 E-value=1.4e-09 Score=122.30 Aligned_cols=248 Identities=15% Similarity=0.142 Sum_probs=141.1
Q ss_pred CCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHHHHHHH
Q 003145 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 232 ~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
+|+|++|......+...+-....++|+++..+-. -+.+.+. |+.+++.+-+. .+|++.-.+....+++.+
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTEQAKDNLLR----- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCHHHHHHHHH-----
Confidence 4999999544444433333333468886543211 1111111 12222222211 145555555555555432
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhC-CCcEEEE-Eecc-cccCCHHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLG-VDRL-DMIKGIPQKLLAFE 386 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~-VdRl-d~~KGi~~~l~Af~ 386 (844)
.| ....+|.++++|+....+...... ....++++++ ++.+++. ..|. ...||+..+++|+.
T Consensus 159 ~G-----------~~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~ 222 (365)
T TIGR00236 159 EN-----------VKADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAIR 222 (365)
T ss_pred cC-----------CCcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHHH
Confidence 12 224578999999633322221111 1123445553 3345555 4465 34599999999999
Q ss_pred HHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEc
Q 003145 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (844)
Q Consensus 387 ~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~ 466 (844)
++.+++|+++ +++++.|. +. .+..+. ..++. . ..|+ +.+.++..++..+|+.||+++.+
T Consensus 223 ~l~~~~~~~~----~vi~~~~~----~~---~~~~~~---~~~~~----~--~~v~-~~~~~~~~~~~~~l~~ad~vv~~ 281 (365)
T TIGR00236 223 EIVEEFEDVQ----IVYPVHLN----PV---VREPLH---KHLGD----S--KRVH-LIEPLEYLDFLNLAANSHLILTD 281 (365)
T ss_pred HHHHHCCCCE----EEEECCCC----hH---HHHHHH---HHhCC----C--CCEE-EECCCChHHHHHHHHhCCEEEEC
Confidence 9988888653 55554332 11 112221 22211 1 1355 46788999999999999999988
Q ss_pred CCCcCCChhHhhhhhcccCCCceEEEe-CCCCchhhc-cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003145 467 SLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 535 (844)
Q Consensus 467 S~~EG~~Lv~~Eama~~~~~~g~lVlS-e~~G~~~~l-g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r 535 (844)
| |.+.+|||+|+ .|+|.+ ..+|..+.+ ...++++ |.|+++++++|.++++.+ +.+.++
T Consensus 282 S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 282 S-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred C-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 8 55689999996 677775 445544444 2245666 579999999999999854 344433
No 124
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.21 E-value=2.3e-09 Score=121.97 Aligned_cols=260 Identities=11% Similarity=0.076 Sum_probs=152.9
Q ss_pred CCCEEEEeCccchhHHHHHH-hcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLK-EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr-~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~ 309 (844)
.+|+|.++ |...+-..++ ....++|+.. +++-+..... | + --.+|.+...+....+.+..
T Consensus 104 kPDvVi~~--~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w---~---~~~~d~~~v~s~~~~~~l~~----- 164 (391)
T PRK13608 104 KPDLILLT--FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W---I---TPYSTRYYVATKETKQDFID----- 164 (391)
T ss_pred CcCEEEEC--CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c---c---cCCCCEEEECCHHHHHHHHH-----
Confidence 45898885 3332333343 3344677743 4554411100 1 1 12478777766554444322
Q ss_pred hCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh---CCCc-EEEEEecccccCCHHHHHHHH
Q 003145 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRK-VMLGVDRLDMIKGIPQKLLAF 385 (844)
Q Consensus 310 l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~-vil~VdRld~~KGi~~~l~Af 385 (844)
.|. ...+|.++++.|+.. |.+.. + ...+++.+ ++++ ++++.||+...||+..+++++
T Consensus 165 ~gi-----------~~~ki~v~GiPv~~~-f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~ 225 (391)
T PRK13608 165 VGI-----------DPSTVKVTGIPIDNK-FETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI 225 (391)
T ss_pred cCC-----------CHHHEEEECeecChH-hcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH
Confidence 121 123566666666643 43211 1 12334444 2444 556799999999999999985
Q ss_pred HHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEE
Q 003145 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (844)
Q Consensus 386 ~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~ 465 (844)
++..|+ +.++++++. .+ ++.+++.+.. +. . ..|+ +.|++ +++..+|+.||+++.
T Consensus 226 ---~~~~~~----~~~vvv~G~----~~---~l~~~l~~~~---~~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~ 279 (391)
T PRK13608 226 ---LAKSAN----AQVVMICGK----SK---ELKRSLTAKF---KS----N--ENVL-ILGYT--KHMNEWMASSQLMIT 279 (391)
T ss_pred ---HhcCCC----ceEEEEcCC----CH---HHHHHHHHHh---cc----C--CCeE-EEecc--chHHHHHHhhhEEEe
Confidence 334454 346555431 12 1223333221 11 0 1354 35665 579999999999986
Q ss_pred cCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh-----ccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 003145 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (844)
Q Consensus 466 ~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~-----lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~ 540 (844)
. +.|+++.|||||| .|+|++...+..+. +...|.-+-+.|.++++++|.++++++ +.+.++.++++
T Consensus 280 k----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~ 350 (391)
T PRK13608 280 K----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTME 350 (391)
T ss_pred C----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHH
Confidence 3 4589999999996 78888754322221 112333333569999999999999864 56677777888
Q ss_pred HHHHhcCHHHHHHHHHHHHHHhH
Q 003145 541 THVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
+..+.+++...++.+++.+....
T Consensus 351 ~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 351 QDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HhcCCCCHHHHHHHHHHHhhhhh
Confidence 88888999988888887776544
No 125
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.19 E-value=9.5e-09 Score=121.69 Aligned_cols=182 Identities=13% Similarity=0.109 Sum_probs=126.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHH--hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 439 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~ 439 (844)
+..+|.+|.|+...||...++.+++++++ ++|+ ..+++|+.|.+...+.. -+++.+.+.+++.. -.|. +
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~--~pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~--~-- 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPE--RPVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFR--G-- 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCC--C--
Confidence 45688899999999999999999999985 5554 24778888765444322 23455566665543 0021 1
Q ss_pred cEEEeCCCCCHHHHHHHHHhCcEEEE-cCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECC----
Q 003145 440 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 511 (844)
Q Consensus 440 pv~~~~~~v~~~el~aly~~ADv~v~-~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP---- 511 (844)
.|.|+. ..+-+--..+|..||++++ ||. .|..|+.-+=||.- |.|-+|-.-|...+. +.+|+.+.+
T Consensus 459 kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 366544 4455555678999999999 888 99999999999986 778888888776654 568999985
Q ss_pred --------CCHHHHHHHHHHHh-c----CCH----HHHHHHHHHHHHH-HHhcCHHHHHHHHHHH
Q 003145 512 --------WNITEVANAIARAL-N----MSP----EEREKRHWHNFTH-VTTHTAQEWAETFVSE 558 (844)
Q Consensus 512 --------~d~~~~A~ai~~aL-~----m~~----~er~~r~~~~~~~-v~~~~~~~W~~~fl~~ 558 (844)
.|.+++-++|.+++ . .+. .+-.++++++... ...++|.+=++.+.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 2 111 1223333333222 2358888888877654
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.15 E-value=4.3e-09 Score=117.88 Aligned_cols=242 Identities=14% Similarity=0.066 Sum_probs=138.8
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc--HHHHHhhhcCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR--SDLLRAVLAADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r--~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
..|+|++|++....++..+..+..++|+++..|.-.. .+ +..|+. +..+. -.+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s-~~--~~~~~~~~r~~~~--~~ad~~~~~s~~~~~~l~~---- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS-FD--RGMPDEENRHAID--KLSDLHFAPTEEARRNLLQ---- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc-CC--CCCCchHHHHHHH--HHhhhccCCCHHHHHHHHH----
Confidence 4699999987766665555544457888865542110 00 011111 11111 1245444334333333221
Q ss_pred HhCcccCCCceeeCCeEEEEEEEeccc-ChhHHhhhhcCCchHHHHHHHHHHh--C-CCcEEEEEecccc---cCCHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQK 381 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~P~GI-D~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~vil~VdRld~---~KGi~~~ 381 (844)
.+....+|.++++++ |...+.+..... ...++.+ . ++.+++.++|+.. .||+..+
T Consensus 159 ------------~G~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l 220 (363)
T cd03786 159 ------------EGEPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKKYILVTLHRVENVDDGEQLEEI 220 (363)
T ss_pred ------------cCCCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCCEEEEEeCCccccCChHHHHHH
Confidence 122345788888875 654443221110 0112222 2 3457778999875 7999999
Q ss_pred HHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCc
Q 003145 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 461 (844)
Q Consensus 382 l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~AD 461 (844)
++|++.+.+. ++.++..+. .+....+++ .+.+.+.. ...|. +.+....+++..+|+.||
T Consensus 221 ~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~----~~~~~~~~-----~~~v~-~~~~~~~~~~~~l~~~ad 279 (363)
T cd03786 221 LEALAELAEE------DVPVVFPNH-----PRTRPRIRE----AGLEFLGH-----HPNVL-LISPLGYLYFLLLLKNAD 279 (363)
T ss_pred HHHHHHHHhc------CCEEEEECC-----CChHHHHHH----HHHhhccC-----CCCEE-EECCcCHHHHHHHHHcCc
Confidence 9999987432 233443322 222233333 33332210 01355 466677899999999999
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCC-CHHHHHHHHHHHhcCCH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 529 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~-d~~~~A~ai~~aL~m~~ 529 (844)
++|.+|- | +..|||+|+ .|+|++...+....+..+|..+.+. |.++++++|.++++++.
T Consensus 280 ~~v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 280 LVLTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEEEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 9999994 4 479999996 7888886655444443566555443 79999999999998753
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.12 E-value=9.2e-10 Score=109.88 Aligned_cols=200 Identities=18% Similarity=0.206 Sum_probs=119.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc---CceEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l---~l~lia 666 (844)
..+|||+|+||||++...+| +.....|.+|.. .|..|+.+|..+...+..+-+.+ ++.+||
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~---------------~pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW---------------QPAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC---------------CccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 46899999999999965433 234556677765 69999999999999998888877 468999
Q ss_pred ecceEEEecCCeeeecc--c------ccCCh-HHHHHHHHHHHHHHhcCCCceEe----------------------ecc
Q 003145 667 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 715 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~--~------~~~~~-~w~~~v~~i~~~~~~rt~gs~iE----------------------~k~ 715 (844)
|||+.|..+ +.|...- + ..... .-.+.+.+.++...+...-.++. .++
T Consensus 70 EnG~aI~~p-~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLP-KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEec-ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 999999842 2232110 0 00000 01123333332221110000000 011
Q ss_pred ceEEEEeecCChhhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEE
Q 003145 716 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 795 (844)
Q Consensus 716 ~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vla 795 (844)
.+.+.-.+..| ++..++ ...+...+++++.|....-|....-.||.|++.+++.+.. .....-++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r----l~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR----LGGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh----cCceeEEEe
Confidence 12111112111 111111 2222234688999988888888788899999999997642 022345899
Q ss_pred EeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 796 IGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 796 iGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
+|| +.|| ||+ .+.+.|++-..+-++
T Consensus 215 ~GD-g~nD~Pl~ev~d~AfiV~~lnre~~~ 243 (274)
T COG3769 215 LGD-GPNDAPLLEVMDYAFIVKGLNREGVH 243 (274)
T ss_pred cCC-CCCcccHHHhhhhheeecccchhhhh
Confidence 999 9999 999 788888865444333
No 128
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.07 E-value=1.6e-08 Score=118.18 Aligned_cols=274 Identities=12% Similarity=0.088 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHHHhh----CCCCCEEE--EeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCc--cHHHHHhh
Q 003145 214 YIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAV 285 (844)
Q Consensus 214 Y~~vN~~fa~~i~~~----~~~~DiVw--vHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~--r~~ll~~l 285 (844)
|...+..++..+.+. ..++|++. ++.-|... +....|.-++.+..|+ =+ . |. -...+..+
T Consensus 203 f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~~ 270 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYESL 270 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhCh
Confidence 333444444443333 56789888 67777666 3333333334446665 11 1 21 24566677
Q ss_pred hcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcE
Q 003145 286 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKV 365 (844)
Q Consensus 286 l~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~v 365 (844)
-.+|.|...|..-.+..... ++. .. ...+|..+|++.- . ... . ..++..++.|
T Consensus 271 ~~~d~iIv~T~~q~~~l~~~----~~~--------~~-~~~~v~~Ip~~~~-~-~~~--~----------~s~r~~~~~I 323 (519)
T TIGR03713 271 SRADLIIVDREDIERLLEEN----YRE--------NY-VEFDISRITPFDT-R-LRL--G----------QSQQLYETEI 323 (519)
T ss_pred hhcCeEEEcCHHHHHHHHHH----hhh--------cc-cCCcceeeCccce-E-Eec--C----------hhhcccceEE
Confidence 77887776665433322211 110 00 1234556676543 1 111 0 1122235556
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC--------
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-------- 437 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~-------- 437 (844)
.+++||| +.|-+..+|+|+.++++++|+.. |.+.|.+. .. ++.+.+++++.++|..++...
T Consensus 324 ~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~~ 392 (519)
T TIGR03713 324 GFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSEQ 392 (519)
T ss_pred EEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccchh
Confidence 6667799 99999999999999999999854 66666432 11 234556666666665432100
Q ss_pred --------------cccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-
Q 003145 438 --------------AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (844)
Q Consensus 438 --------------~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l- 502 (844)
-...+.|.|..+..++...|..|.++|.+|..|||+ ..+||++.| .|.| .-|.++.+
T Consensus 393 ~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V~ 464 (519)
T TIGR03713 393 DENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYVE 464 (519)
T ss_pred hhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceeeE
Confidence 002344688888889999999999999999999999 999999984 4455 66777777
Q ss_pred -cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCH
Q 003145 503 -GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 548 (844)
Q Consensus 503 -g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~ 548 (844)
|.+|++| .|..++++||...|..+. ...+....+.+.+.+++.
T Consensus 465 d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 465 HNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred cCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 7899999 699999999999998653 444444555555555543
No 129
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.05 E-value=2.8e-08 Score=110.52 Aligned_cols=241 Identities=14% Similarity=0.025 Sum_probs=143.7
Q ss_pred HHhhCCCCCEEEEeCccchh--HHH-HHHh-cCCCCeEEEEEecCCCChhhhhcCC-ccHHHHHhhhcCCEEEEecHHHH
Q 003145 225 VNKHYKDGDVVWCHDYHLMF--LPK-CLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 299 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl~l--lp~-~lr~-~~~~~~i~~flH~Pfp~~e~~r~lp-~r~~ll~~ll~aDlIgf~t~~~~ 299 (844)
+...+++||+|++|..-+.. ++. ++++ +..++|+++++|--+|-. +.... ........+-.||.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45567899999999854432 222 2222 112799999999877632 11111 12223334446899999887655
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHH
Q 003145 300 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 379 (844)
Q Consensus 300 ~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~ 379 (844)
+.+.+ .|.. ..++.++|+..++..... +....+++.|+++||+....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 55432 1211 123444444332211100 01113466899999999433211
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
...|+ +.|+++|.+ ++.. .. ...|.| .|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~g-----~~~~-----------~~--------~~~V~f-~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGPN-----PEDL-----------EN--------SANISY-KGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECCC-----cccc-----------cc--------CCCeEE-ecCCCHHHHHHHHhc
Confidence 12343 457777642 2110 00 013664 899999999999998
Q ss_pred CcEEEEcCCC-----------cCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 003145 460 TDVALVTSLR-----------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 460 ADv~v~~S~~-----------EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
|+.+++.-. -.++--..|||||| .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 766654321 23444588899996 899999999989888 56799997 678899998874
Q ss_pred CCHHHHHHHHHHHHHHHHhc
Q 003145 527 MSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 527 m~~~er~~r~~~~~~~v~~~ 546 (844)
+++++.++.++.++..+..
T Consensus 298 -~~~~~~~m~~n~~~~~~~~ 316 (333)
T PRK09814 298 -TEEEYQEMVENVKKISKLL 316 (333)
T ss_pred -CHHHHHHHHHHHHHHHHHH
Confidence 4566766666666665443
No 130
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.03 E-value=9.9e-10 Score=104.93 Aligned_cols=129 Identities=25% Similarity=0.316 Sum_probs=89.2
Q ss_pred CcEEEEEecccccCCHHHHHH-HHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 363 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 363 ~~vil~VdRld~~KGi~~~l~-Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
..+|++.|++.+.||+..+++ |++++.+++|+ +.|.++|.. ++ +++++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~~-----~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGNG-----PD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECES-----S-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeCC-----HH------HHHHh----cC-------CCE
Confidence 357889999999999999999 99999999986 558877652 22 12222 10 136
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHH
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A 518 (844)
.+ .+.+ +++.++|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 65 6777 689999999999999985 789999999999996 78888887 555554 2356666 88999999
Q ss_pred HHHHHHhc
Q 003145 519 NAIARALN 526 (844)
Q Consensus 519 ~ai~~aL~ 526 (844)
++|.++++
T Consensus 127 ~~i~~l~~ 134 (135)
T PF13692_consen 127 EAIERLLN 134 (135)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999986
No 131
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.99 E-value=4.9e-08 Score=110.22 Aligned_cols=150 Identities=19% Similarity=0.183 Sum_probs=96.8
Q ss_pred HHHHhC---CCcEE-EEEe-cccccCC-HHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003145 356 LQETFA---GRKVM-LGVD-RLDMIKG-IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (844)
Q Consensus 356 lr~~~~---~~~vi-l~Vd-Rld~~KG-i~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~I 429 (844)
+++.++ ++++| +..| |....|+ +..+++|++.+.+++|++ .+++++. +++.. +++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~~~----~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPKRR----EQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----ChhhH----HHHHHHHhhc
Confidence 445553 45544 3334 7766544 788999999998887764 4666643 12222 2333333321
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe----------------
Q 003145 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 493 (844)
Q Consensus 430 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS---------------- 493 (844)
. | . .+.++. .++..+|+.||+++.+| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 1 1 244333 47899999999999998 78889999996 788877
Q ss_pred -CCCCchhhccC----CeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 494 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 494 -e~~G~~~~lg~----~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
.+.|.++.+.. .+++.++.|++++++++.++|+++ +.+.++.+++
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 44455565521 346778889999999999999865 3555544443
No 132
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.94 E-value=1.7e-08 Score=99.28 Aligned_cols=202 Identities=18% Similarity=0.254 Sum_probs=130.9
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--C--
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N-- 661 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~-- 661 (844)
+++-..-|+.||.||||++. ..+++|++.+.|++|.+ ...+.++-|.+++-+.+.++.- +
T Consensus 6 ~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~f 69 (252)
T KOG3189|consen 6 AARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEF 69 (252)
T ss_pred hhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhh
Confidence 44455669999999999987 46789999999999875 7999999999988888777542 2
Q ss_pred ceEEeecceEEEecCCee--eecccccC-ChHHHHHHHHHHHHHHhc----CCCceEeeccceEEEEe--ecCChh----
Q 003145 662 LWLAAENGMFLRCTTGKW--MTTMPEHL-NMEWVDSLKHVFEYFTER----TPRSHFEQRETSLVWNY--KYADVE---- 728 (844)
Q Consensus 662 l~liaenG~~i~~~~~~w--~~~~~~~~-~~~w~~~v~~i~~~~~~r----t~gs~iE~k~~sl~~hy--~~~d~e---- 728 (844)
.+..+|||..-...++.. +.+. ..+ +...++.+.-.+.|..+- -.|.+||-+...+.+.- |++..|
T Consensus 70 DY~F~ENGl~~yk~gk~~~~Qsi~-~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~e 148 (252)
T KOG3189|consen 70 DYVFSENGLVAYKGGKLLSKQSII-NHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNE 148 (252)
T ss_pred cccccCCCeeEeeCCcchhHHHHH-HHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHH
Confidence 378899999876544321 1111 001 111122222233333322 34889998877765543 444321
Q ss_pred hhH-----HHHHHHHHHHhcCCCCCCCeEEEE-cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee---C
Q 003145 729 FGR-----IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---F 799 (844)
Q Consensus 729 ~~~-----~qa~el~~~L~~~~~~~~~~~v~~-g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD---~ 799 (844)
|.. ..-..+.+.| .+-+.+.+++..- |.-+++|-|.||+|-.++++|-+. + .+.+.+||| .
T Consensus 149 F~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGDkT~~ 218 (252)
T KOG3189|consen 149 FEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGDKTMP 218 (252)
T ss_pred HHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEeccccCC
Confidence 221 1123455566 3334566777654 567999999999999999988654 3 789999999 2
Q ss_pred CCch--hhc---cCcEEEeC
Q 003145 800 LGKV--LLT---QFLIQVGS 814 (844)
Q Consensus 800 ~~nD--Mf~---g~~Iavgn 814 (844)
+.|| .|. -.|..|.+
T Consensus 219 GGNDyEIf~dprtiGhsV~~ 238 (252)
T KOG3189|consen 219 GGNDYEIFADPRTIGHSVTS 238 (252)
T ss_pred CCCcceeeeCCccccccccC
Confidence 6688 665 34444444
No 133
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.94 E-value=1.8e-07 Score=107.59 Aligned_cols=322 Identities=17% Similarity=0.195 Sum_probs=161.2
Q ss_pred HHHHHHHHhhCCCCC--EEEEeCccchhHHHHHHhcCCCCeEEEEEecCCC-------ChhhhhcCCc--cHHH------
Q 003145 219 QMFADVVNKHYKDGD--VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS--RSDL------ 281 (844)
Q Consensus 219 ~~fa~~i~~~~~~~D--iVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp-------~~e~~r~lp~--r~~l------ 281 (844)
..|.+.+.+...... +.+.|.|..-+-.-++|++.|++.-+|+.|---+ ..+++..|+. ..+.
T Consensus 129 a~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i 208 (633)
T PF05693_consen 129 AWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNI 208 (633)
T ss_dssp HHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-
T ss_pred HHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccc
Confidence 444444444444233 3366888777777788999999999999996422 1123333331 0111
Q ss_pred ------HHh-hhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhc----CCchH
Q 003145 282 ------LRA-VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQ 350 (844)
Q Consensus 282 ------l~~-ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~----~~~~~ 350 (844)
.+. -..||....-+.--+ .-|..+|+ |.. =.|.|||+|.+.|...-. ....+
T Consensus 209 ~~k~~iEraaA~~AdvFTTVSeITa----~Ea~~LL~------------r~p-DvV~pNGl~v~~~~~~~efqnl~~~~k 271 (633)
T PF05693_consen 209 YHKHSIERAAAHYADVFTTVSEITA----KEAEHLLK------------RKP-DVVTPNGLNVDKFPALHEFQNLHAKAK 271 (633)
T ss_dssp HHHHHHHHHHHHHSSEEEESSHHHH----HHHHHHHS------------S---SEE----B-GGGTSSTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCeeeehhhhHH----HHHHHHhC------------CCC-CEEcCCCccccccccchHHHHHHHHHH
Confidence 111 112333222221110 01222332 221 136699999887654311 01122
Q ss_pred HHHHHH-HHHh-C------CCcEEEE-Eeccc-ccCCHHHHHHHHHHHHH---hCcCCCCceEEEEEEcCCCCCh---H-
Q 003145 351 VHIKEL-QETF-A------GRKVMLG-VDRLD-MIKGIPQKLLAFEKFLE---ENSDWRGKVVLLQIAVPTRTDV---P- 413 (844)
Q Consensus 351 ~~~~~l-r~~~-~------~~~vil~-VdRld-~~KGi~~~l~Af~~ll~---~~P~~~~~v~Lv~i~~p~r~~~---~- 413 (844)
+.+.++ +..+ + ++.++++ .||.+ ..||++..|+|+.+|-. .... ...|+.+ |..|+.... +
T Consensus 272 ~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~-~~tVVaF-ii~pa~~~~~~ve~ 349 (633)
T PF05693_consen 272 EKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGS-DKTVVAF-IIVPAKTNSFNVES 349 (633)
T ss_dssp HHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT--S-EEEEE-EE---SEEEE-HHH
T ss_pred HHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCC-CCeEEEE-EEecCccCCcCHHH
Confidence 334433 2222 1 3455555 88998 67999999999998743 2111 1123333 334654432 1
Q ss_pred -----HHHHHHHHHHHHHHHhhcc-c-----C------------------------------------------------
Q 003145 414 -----EYQRLTSQVHEIVGRINGR-F-----G------------------------------------------------ 434 (844)
Q Consensus 414 -----~~~~l~~~l~~lv~~IN~~-~-----g------------------------------------------------ 434 (844)
-+.+|++.++++.++|..+ | |
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 0223333333222222110 0 0
Q ss_pred ---------CCCcccEEEeCCCCCH------HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch
Q 003145 435 ---------TLTAVPIHHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499 (844)
Q Consensus 435 ---------~~~~~pv~~~~~~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~ 499 (844)
..+...|+|....++. -++..+.+.+|+.|+||.+|.+|.+++|+.|.+ .|-|.|..+|..
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG 505 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFG 505 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHH
Confidence 0122445654444432 367789999999999999999999999999995 789999999988
Q ss_pred hhc-------cCCeEEE-CC--CC----HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhH
Q 003145 500 QSL-------GAGAILV-NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 563 (844)
Q Consensus 500 ~~l-------g~~g~lv-nP--~d----~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 563 (844)
..+ ...|+.| += .+ ++++|+.|.+...++..+|.....+..+.....+|......+.+....+.
T Consensus 506 ~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 506 CWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 655 1346655 22 23 45666777777788887777766666565677788887777766655543
No 134
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.88 E-value=3.2e-07 Score=110.84 Aligned_cols=182 Identities=16% Similarity=0.121 Sum_probs=121.6
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHH--hCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~--~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
.+|.++.|+...|+...++..+++|.+ .+|+ ..+++|..|.+...+.+ -+++.+.+.+++.. -+|. + .|
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~--~--kV 549 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFR--G--RI 549 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCC--C--cE
Confidence 378889999999999999999999865 3444 24888888765444322 23455555555431 0221 1 46
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECC------
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------ 511 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP------ 511 (844)
.|+. ..+-+--..++..|||++.||. .|.-|+.-+=||.. |+|-+|..-|.-.+. |.+|+.+.+
T Consensus 550 vfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~ 623 (778)
T cd04299 550 VFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYED 623 (778)
T ss_pred EEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccC
Confidence 6654 4455555678999999999999 99999999999885 889999998887766 678999988
Q ss_pred ------CCHHHHHHHHHHHhc----CC-----HHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHH
Q 003145 512 ------WNITEVANAIARALN----MS-----PEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 560 (844)
Q Consensus 512 ------~d~~~~A~ai~~aL~----m~-----~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 560 (844)
.|.+++-+.|.+.+- .. +.+-.+++++.... .-.|++.+=++.|++.+-
T Consensus 624 ~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 624 DEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455555566644332 10 11233333333222 345777777777766654
No 135
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.80 E-value=3.4e-08 Score=100.55 Aligned_cols=190 Identities=16% Similarity=0.228 Sum_probs=114.8
Q ss_pred HHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc-c-c---CceEEeecceEEEecC-CeeeecccccCChH-HHHHHHHHH
Q 003145 627 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-E-Y---NLWLAAENGMFLRCTT-GKWMTTMPEHLNME-WVDSLKHVF 699 (844)
Q Consensus 627 ~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~-~-l---~l~liaenG~~i~~~~-~~w~~~~~~~~~~~-w~~~v~~i~ 699 (844)
|.+.|.+|.+ +..|.|+||-++.-+++.+. . + -.++.++||..++..+ ..|.+.+.+.+..+ -++.+..++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 5688999986 79999999999999988884 3 2 2479999999776534 44654432222212 122333333
Q ss_pred HHHHh----cCCCceEeeccceEEEEe--ecCChh----hhHH----H-HHHHHHHHhcCCCCCCCeEEEE-cCcEEEEE
Q 003145 700 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGRI----Q-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 763 (844)
Q Consensus 700 ~~~~~----rt~gs~iE~k~~sl~~hy--~~~d~e----~~~~----q-a~el~~~L~~~~~~~~~~~v~~-g~~~vEV~ 763 (844)
.+..+ ...|.+||.+...+.+.- ++|..+ |..+ . -+.+.+.| ...+.+.++++.. |.-+++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 33322 135899999999999875 444321 2110 0 12455555 4334566788765 67899999
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeC---CCch--hhccCcEEEeCCCCcchhhhcCCHHHHHHHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKV--LLTQFLIQVGSSINSLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~---~~nD--Mf~g~~Iavgna~~~~a~~~l~~~~~v~~~l~~~ 837 (844)
|+|++|..++++|.+. ..+.+++|||. +.|| +|..- -...+.+.+|++-...|+.|
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~~---------rt~g~~V~~p~DT~~~l~~l 218 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFEDP---------RTIGHTVTSPEDTIKQLKEL 218 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHST---------TSEEEE-SSHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeecC---------CccEEEeCCHHHHHHHHHHH
Confidence 9999999999988543 26899999992 6788 66521 11234455666666666655
No 136
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.51 E-value=6.8e-07 Score=79.83 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=73.7
Q ss_pred EEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 462 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 462 v~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
|++.|+..+|++...+|+|||| +|+|.+...+..+.+ |..++.++ |+++++++|..+|+.| +++++..+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4678889999999999999995 566666666777777 55688887 9999999999999954 5888888999
Q ss_pred HHHHH-hcCHHHHHHHHH
Q 003145 540 FTHVT-THTAQEWAETFV 556 (844)
Q Consensus 540 ~~~v~-~~~~~~W~~~fl 556 (844)
+++|. .|++.+-++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 98885 899998888876
No 137
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.47 E-value=1.8e-05 Score=89.85 Aligned_cols=135 Identities=16% Similarity=0.115 Sum_probs=84.0
Q ss_pred CCcEEEE--Eecccc-cCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003145 362 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (844)
Q Consensus 362 ~~~vil~--VdRld~-~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~ 438 (844)
++++|+. .+|..+ .|+++.+++|++.+.+.+|+++ +++.+.+. ... ..++++....+ . +
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHhC----C-C-
Confidence 5566544 359887 7999999999999988888754 54433221 111 12222222221 1 1
Q ss_pred ccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeC-----------------CCCchhh
Q 003145 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 501 (844)
Q Consensus 439 ~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe-----------------~~G~~~~ 501 (844)
..+.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544333 3457999999999999 77788999996 6777762 2222222
Q ss_pred c-cCCeE--EE-CCCCHHHHHHHHHHHhcCC
Q 003145 502 L-GAGAI--LV-NPWNITEVANAIARALNMS 528 (844)
Q Consensus 502 l-g~~g~--lv-nP~d~~~~A~ai~~aL~m~ 528 (844)
+ +.+++ ++ .-.+++.+++++.++|.++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 3 22221 11 3356889999999999876
No 138
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.35 E-value=1e-06 Score=89.50 Aligned_cols=59 Identities=17% Similarity=0.169 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcC------CHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKR------KVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~------~~~~v~~~l 834 (844)
|..+++.++++++ .+++++++||| +.+| |++ |++++|+++.+. .|.+.+. .+.++..+|
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 6688899999998 67899999999 9999 666 889999886543 2445554 467776655
No 139
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.32 E-value=1.3e-06 Score=82.29 Aligned_cols=63 Identities=19% Similarity=0.297 Sum_probs=48.8
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+++||+||||++...... ......+.+.+.+.|++|+++ |+.++|+||+....+..+++..++
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCC
Confidence 489999999998742100 001236788999999999984 899999999999999988887543
No 140
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.30 E-value=2.1e-06 Score=84.74 Aligned_cols=66 Identities=15% Similarity=0.072 Sum_probs=51.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC---cchhhhcCCHHH---HHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN---SLSKEKKRKVHQ---LFGIFLRF 837 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~---~~a~~~l~~~~~---v~~~l~~~ 837 (844)
+|..++.+++++++ .+++.++++|| +.|| |++ +++++|.++.+ ..|++.+.++.. +..+++.+
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 48889999999988 67899999999 9999 776 89999999864 345556666643 66777776
Q ss_pred hhc
Q 003145 838 SYS 840 (844)
Q Consensus 838 ~~~ 840 (844)
..+
T Consensus 149 ~~~ 151 (154)
T TIGR01670 149 LLA 151 (154)
T ss_pred HHh
Confidence 654
No 141
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.27 E-value=0.00012 Score=84.24 Aligned_cols=121 Identities=14% Similarity=0.216 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
...|+|++.+.+..|++. |=+ |.++ + +...|.++ . +| ..++.+.+ .....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~----~y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-D----KY-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-H----hc-----CCcEEECC-cChHHHHHHHH
Confidence 899999999999999865 543 5443 1 11233333 2 22 13554454 44567889999
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe--CCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCH
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--EFAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 529 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS--e~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~ 529 (844)
.||++|.+|..||+++.+.||+.. |.+|+| ...|..+.+ ..|.++++.|+++++++|.++|.++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 556665 444555555 55999999999999999999998764
No 142
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.21 E-value=3.7e-07 Score=100.55 Aligned_cols=64 Identities=16% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhhhcCCHHHHHHHHHHHh
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~~l~~~~~v~~~l~~~~ 838 (844)
+-.|+.+++++++++| ++++.+++||| +.|| |++ |++|+| ||.+. .|++.++ +.++-.+|--|+
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~-~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIR-HADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEec-CcCHHHHHHHhc
Confidence 3589999999999998 78999999999 9999 887 999999 88764 5555564 444555544443
No 143
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.16 E-value=3.1e-06 Score=83.76 Aligned_cols=77 Identities=14% Similarity=0.097 Sum_probs=55.4
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---Hhhcc-----cC---
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-----YN--- 661 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~-----l~--- 661 (844)
++++|+||||+..... ++...-+ ....+++.+.+++++|.+ .|+.|+++|||+..... +++.. .+
T Consensus 1 iVisDIDGTL~~sd~~-~~~~~~~--~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GHVVPII--GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-ccccccc--ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999987310 0000000 013678999999999998 59999999999988774 67766 22
Q ss_pred ceEEeecceEEE
Q 003145 662 LWLAAENGMFLR 673 (844)
Q Consensus 662 l~liaenG~~i~ 673 (844)
..+++.||+++.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 368889998885
No 144
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.03 E-value=0.003 Score=70.62 Aligned_cols=221 Identities=20% Similarity=0.243 Sum_probs=141.0
Q ss_pred ccHHHHHhhhc-CCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHH
Q 003145 277 SRSDLLRAVLA-ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 355 (844)
Q Consensus 277 ~r~~ll~~ll~-aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~ 355 (844)
.+..+.+.|+. .|+|.-|+..+.+.|.+ ||... +..-|. .|..+-| .+........
T Consensus 166 k~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~----v~v~GN-lKfd~~~-------------~~~~~~~~~~ 222 (419)
T COG1519 166 KLKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP----VVVTGN-LKFDIEP-------------PPQLAAELAA 222 (419)
T ss_pred HHHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc----eEEecc-eeecCCC-------------ChhhHHHHHH
Confidence 45667777764 69999999999999986 44331 111111 1211111 1222345567
Q ss_pred HHHHhCC-CcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 356 LQETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 356 lr~~~~~-~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
+|..+++ +++++..+. ...--...+.++..+++++|+.. |++| |- .||. -..+++++.+.+-+++
T Consensus 223 ~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~l----lIlV--PR---HpER---f~~v~~l~~~~gl~~~ 288 (419)
T COG1519 223 LRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLL----LILV--PR---HPER---FKAVENLLKRKGLSVT 288 (419)
T ss_pred HHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCCCce----EEEe--cC---Chhh---HHHHHHHHHHcCCeEE
Confidence 7888876 899999988 33334447889999999999753 4433 42 3442 3467777777776554
Q ss_pred CCCc-------ccEEEeCCCCCHHHHHHHHHhCcEEEEcC-C--CcCCChhHhhhhhcccCCCceEEEe----CCCCchh
Q 003145 435 TLTA-------VPIHHLDRSLDFPALCALYAVTDVALVTS-L--RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQ 500 (844)
Q Consensus 435 ~~~~-------~pv~~~~~~v~~~el~aly~~ADv~v~~S-~--~EG~~Lv~~Eama~~~~~~g~lVlS----e~~G~~~ 500 (844)
.-+. .+|.. . -+.-|+..+|+.|||+.+-- + .-|.| ++|+.+++ .|+|.- .|.-+++
T Consensus 289 ~rS~~~~~~~~tdV~l-~--DtmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~ 359 (419)
T COG1519 289 RRSQGDPPFSDTDVLL-G--DTMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAE 359 (419)
T ss_pred eecCCCCCCCCCcEEE-E--ecHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHH
Confidence 3211 23432 1 14579999999999987743 3 35666 58999994 555543 4444444
Q ss_pred hc-c-CCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 003145 501 SL-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (844)
Q Consensus 501 ~l-g-~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~ 546 (844)
.+ . .+|+.|+ |.+.++.++..+++. +++|.++.+++.+.+.++
T Consensus 360 ~l~~~ga~~~v~--~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 360 RLLQAGAGLQVE--DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HHHhcCCeEEEC--CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence 44 2 3467776 477777777777765 778888888888888665
No 145
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.98 E-value=1.2e-05 Score=76.03 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=41.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (844)
|+|++|+||||+.....+- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987532110 124578999999999987 59999999999987543
No 146
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=97.96 E-value=1.8e-05 Score=79.13 Aligned_cols=47 Identities=15% Similarity=0.229 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchh
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSK 821 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~ 821 (844)
.|-..++.++++++ ++++.+++||| +.|| |++ +++++|+||.+.+.+
T Consensus 82 pkp~~~~~~~~~l~------~~~~ev~~iGD-~~nDi~~~~~ag~~~am~nA~~~lk~ 132 (169)
T TIGR02726 82 KKTEPYAQMLEEMN------ISDAEVCYVGD-DLVDLSMMKRVGLAVAVGDAVADVKE 132 (169)
T ss_pred CCHHHHHHHHHHcC------cCHHHEEEECC-CHHHHHHHHHCCCeEECcCchHHHHH
Confidence 45567788888887 67899999999 9999 777 999999999765433
No 147
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.78 E-value=4.6e-05 Score=81.48 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=59.0
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce----
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW---- 663 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~---- 663 (844)
.-.++|+||+||||++... ..++ +|.+.++|.+|.+ .|+.++|+|++++..+...++.+++.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFd 190 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFD 190 (301)
T ss_pred ccceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccC
Confidence 3467999999999998842 1224 5999999999998 59999999999999999888888652
Q ss_pred EEeecceEEEe
Q 003145 664 LAAENGMFLRC 674 (844)
Q Consensus 664 liaenG~~i~~ 674 (844)
.|..+|...+.
T Consensus 191 vIIs~Gdv~~~ 201 (301)
T TIGR01684 191 IIISGGHKAEE 201 (301)
T ss_pred EEEECCccccC
Confidence 67778877653
No 148
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.43 E-value=0.00027 Score=75.79 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=55.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCce----E
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW----L 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~----l 664 (844)
-.++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...++.+++. .
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 458999999999998842 1222 5899999999998 69999999988888888888887542 5
Q ss_pred EeecceEEE
Q 003145 665 AAENGMFLR 673 (844)
Q Consensus 665 iaenG~~i~ 673 (844)
+..+|....
T Consensus 194 II~~g~i~~ 202 (303)
T PHA03398 194 IICGGRKAG 202 (303)
T ss_pred EEECCCccc
Confidence 666666554
No 149
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.40 E-value=0.00097 Score=69.33 Aligned_cols=61 Identities=18% Similarity=0.221 Sum_probs=46.8
Q ss_pred EEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC--CcchhhhcCCH
Q 003145 760 VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI--NSLSKEKKRKV 827 (844)
Q Consensus 760 vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~--~~~a~~~l~~~ 827 (844)
+-..-.+-.|..+++.+++.+| ++++.++++|| +.|| ||+ +.+|++.... ...|+.++...
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~~ia~n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGLPIAVNPKPKLRALADVRIWPI 202 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCCCeEeCcCHHHHHHHHHhcChh
Confidence 3344455689999999999999 77899999999 9999 998 8999987753 23444455444
No 150
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.18 E-value=0.0032 Score=65.40 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCC--CcchhhhcC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSI--NSLSKEKKR 825 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~--~~~a~~~l~ 825 (844)
.|+..++.++++++ .+++.++++|| +.+| +.+ |++|+++... ...|++-+.
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~ 208 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAGLGIAFNAKPKLQQKADICIN 208 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCCCeEEeCCCHHHHHhchhccC
Confidence 48999999999988 67899999999 8899 444 7888886432 134455544
No 151
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.92 E-value=0.001 Score=63.37 Aligned_cols=65 Identities=20% Similarity=0.291 Sum_probs=48.9
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC--------hhhHHHhhcccCce
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNLW 663 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~--------~~~l~~~~~~l~l~ 663 (844)
|+++||+||||++.... ..+.....+.+.+.++|+.|.+ .|..++|+|+++ ...+...++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~------~~~~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY------VDDEDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCC------CCCHHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 68999999999953110 0011245678899999999987 599999999999 77788888776553
No 152
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.13 Score=56.06 Aligned_cols=138 Identities=16% Similarity=0.207 Sum_probs=98.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHh-------CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccC
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-------NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 434 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~-------~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g 434 (844)
...++++--.+.+-..+.-+++|+..+-++ .|. + |.+|+ |.||..+.+.++|++.
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~----l-lciIT----GKGPlkE~Y~~~I~~~--------- 315 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPS----L-LCIIT----GKGPLKEKYSQEIHEK--------- 315 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCc----E-EEEEc----CCCchhHHHHHHHHHh---------
Confidence 356788888899999999999999855221 232 2 33343 2456666666666654
Q ss_pred CCCcccEEEeCCCCCHHHHHHHHHhCcEE--EEcCCCcCCChh--HhhhhhcccCCCceEEEeCCCCchhhc--cCCeEE
Q 003145 435 TLTAVPIHHLDRSLDFPALCALYAVTDVA--LVTSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAIL 508 (844)
Q Consensus 435 ~~~~~pv~~~~~~v~~~el~aly~~ADv~--v~~S~~EG~~Lv--~~Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~l 508 (844)
.|+.|.+.+..+.-++++.++..||.. +.||. -|.-|+ +....-|+ .|+++-.|.-..|.+ |+||++
T Consensus 316 --~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg----lPvcA~~fkcl~ELVkh~eNGlv 388 (444)
T KOG2941|consen 316 --NLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG----LPVCAVNFKCLDELVKHGENGLV 388 (444)
T ss_pred --cccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC----CceeeecchhHHHHHhcCCCceE
Confidence 456788888899999999999999965 45665 455444 55666673 456666776555555 889999
Q ss_pred ECCCCHHHHHHHHHHHhc
Q 003145 509 VNPWNITEVANAIARALN 526 (844)
Q Consensus 509 vnP~d~~~~A~ai~~aL~ 526 (844)
++ |.+++|+.|..+.+
T Consensus 389 F~--Ds~eLa~ql~~lf~ 404 (444)
T KOG2941|consen 389 FE--DSEELAEQLQMLFK 404 (444)
T ss_pred ec--cHHHHHHHHHHHHh
Confidence 96 89999999999987
No 153
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.73 E-value=0.0024 Score=60.92 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=44.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHhhcc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQE 659 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~~~ 659 (844)
|+|++|+||||++.....- ....+ ....++-+.+.+.|+.|.+ .|..++|+|++ +.......++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~-~~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPI-IDLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcc-hhhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998732100 00000 0000357899999999987 59999999999 77666665554
No 154
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.70 E-value=0.002 Score=68.71 Aligned_cols=65 Identities=5% Similarity=0.154 Sum_probs=51.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC---CChhhHHHhhcccCc-----e
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 663 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG---R~~~~l~~~~~~l~l-----~ 663 (844)
|+|+||+||||.... ..+ +.+.++|++|.+ .|..|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~~--------------~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK--------------ERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcCC--------------eeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 689999999999762 223 478999999998 5999999995 899998888887743 3
Q ss_pred EEeecceEE
Q 003145 664 LAAENGMFL 672 (844)
Q Consensus 664 liaenG~~i 672 (844)
+++.+|+..
T Consensus 66 iit~~~~~~ 74 (249)
T TIGR01457 66 VFTASMATA 74 (249)
T ss_pred EeeHHHHHH
Confidence 667777643
No 155
>PRK10444 UMP phosphatase; Provisional
Probab=96.65 E-value=0.0015 Score=69.62 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=45.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.++|+||+||||.... .+.|.+.++|+.|.+ .|..++++|||+......+.+.+
T Consensus 1 ~~~v~~DlDGtL~~~~---------------~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 1 IKNVICDIDGVLMHDN---------------VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CcEEEEeCCCceEeCC---------------eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 3689999999999762 467889999999998 59999999999998777777765
No 156
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.64 E-value=0.0015 Score=70.15 Aligned_cols=56 Identities=7% Similarity=0.112 Sum_probs=42.5
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
|+|+||+||||...... ...+.|.+.++|++|.+ .|..++++|||+....+.....
T Consensus 2 k~i~~D~DGtl~~~~~~-----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~~~~~~~ 57 (257)
T TIGR01458 2 KGVLLDISGVLYISDAK-----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESKQDLLER 57 (257)
T ss_pred CEEEEeCCCeEEeCCCc-----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHH
Confidence 68999999999976310 11267799999999998 5999999999887764444333
No 157
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.58 E-value=0.041 Score=59.57 Aligned_cols=64 Identities=11% Similarity=0.048 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCC--C-----CcchhhhcCCHHHHHHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSS--I-----NSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna--~-----~~~a~~~l~~~~~v~~~l~ 835 (844)
.|..++..++++++ .+++.+++||| +.+|+.. |+ +|.+..+ . ...+.+.+.++.++..++.
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 46788999999988 67899999999 8889554 32 3333332 2 1246778999999999988
Q ss_pred HHh
Q 003145 836 RFS 838 (844)
Q Consensus 836 ~~~ 838 (844)
+|.
T Consensus 269 ~~~ 271 (273)
T PRK13225 269 QLM 271 (273)
T ss_pred HHh
Confidence 774
No 158
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.45 E-value=0.0071 Score=63.90 Aligned_cols=84 Identities=10% Similarity=0.034 Sum_probs=56.5
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccc------c---------------ccccCCChhHHHHHHHhh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQI------R---------------EMELKLHPDLKQPLNALC 635 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~------~---------------~~~~~~~~~~~~~L~~L~ 635 (844)
.++++|.++....+.-.|+||+||||++....-. .+.+. . .....+-+...+.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~-~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFW-RGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQ 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHh-CCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHH
Confidence 4678888888776666999999999998754100 01000 0 012233444899999998
Q ss_pred cCCCCcEEEEcCC----ChhhHHHhhcccCc
Q 003145 636 HDPKTTIVVLSGS----DRNVLDKNFQEYNL 662 (844)
Q Consensus 636 ~d~g~~V~I~SGR----~~~~l~~~~~~l~l 662 (844)
+ .|.+++|+|+| ....++.+.+.+++
T Consensus 128 ~-~G~~i~iVTnr~~~k~~~~a~~ll~~lGi 157 (237)
T TIGR01672 128 R-RGDAIFFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred H-CCCEEEEEeCCCCCcCHHHHHHHHHHhCC
Confidence 7 59999999999 44566666665543
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=96.42 E-value=0.0025 Score=70.38 Aligned_cols=55 Identities=11% Similarity=0.162 Sum_probs=44.1
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.++|+||+||||.... .+-+...++|++|.+ .|.+++++|+|+......+++.+
T Consensus 27 ~~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWKGD---------------KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEeCC---------------ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHHHHH
Confidence 47899999999999762 244778999999998 59999999999966665555443
No 160
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.36 E-value=0.0029 Score=68.71 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=40.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.++|+||+||||.... .+-+.+.++|++|.+ .|..++++|||+......++.
T Consensus 2 ~~~~~~D~DGtl~~~~---------------~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~~~~~~ 53 (279)
T TIGR01452 2 AQGFIFDCDGVLWLGE---------------RVVPGAPELLDRLAR-AGKAALFVTNNSTKSRAEYAL 53 (279)
T ss_pred ccEEEEeCCCceEcCC---------------eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHH
Confidence 5789999999998752 234558999999997 599999999987554444433
No 161
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.14 E-value=0.024 Score=59.62 Aligned_cols=61 Identities=10% Similarity=0.024 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEE--eCC--CCc----chhhhcCCHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQV--GSS--INS----LSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iav--gna--~~~----~a~~~l~~~~~v~~~l~ 835 (844)
+-..+.++++++| ++++.+++||| +.+|+.. |+ .|.+ |.. .+. -+.+.++++.++.+.|+
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~ 225 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPAT 225 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhc
Confidence 4566888999998 77899999999 8899433 43 3333 221 111 26678999999999887
Q ss_pred H
Q 003145 836 R 836 (844)
Q Consensus 836 ~ 836 (844)
|
T Consensus 226 ~ 226 (229)
T PRK13226 226 W 226 (229)
T ss_pred C
Confidence 6
No 162
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.03 E-value=0.0093 Score=59.59 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=44.5
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChh------------hHHHh
Q 003145 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN------------VLDKN 656 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~------------~l~~~ 656 (844)
+.|+++||+||||+...+. +. -+.++.-..+-+.+.++|++|.+ .|..++|+|..+.. .++..
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~---~~~~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~ 87 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVF---PTSASDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSGIGRGKLSAESFKNKIEAF 87 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcc---cCChHHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcccccCcccHHHHHHHHHHH
Confidence 4689999999999975320 00 00000111245789999999987 59999999976542 35566
Q ss_pred hcccCc
Q 003145 657 FQEYNL 662 (844)
Q Consensus 657 ~~~l~l 662 (844)
++.+++
T Consensus 88 l~~~gl 93 (166)
T TIGR01664 88 LEKLKV 93 (166)
T ss_pred HHHcCC
Confidence 666554
No 163
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.01 E-value=0.011 Score=57.08 Aligned_cols=70 Identities=19% Similarity=0.330 Sum_probs=45.3
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
..+.||+++|.||||++-.=.-+..+..+ +..+-.--..|+.|.+ .|++|+|+|||.-.-+++..+.+++
T Consensus 5 a~~IkLli~DVDGvLTDG~ly~~~~Gee~----KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 5 AKNIKLLILDVDGVLTDGKLYYDENGEEI----KAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhhceEEEEeccceeecCeEEEcCCCcee----eeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 45689999999999998531100001111 1111112234555555 5999999999999999999988764
No 164
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=95.91 E-value=0.55 Score=53.02 Aligned_cols=235 Identities=20% Similarity=0.220 Sum_probs=123.5
Q ss_pred CCCCEEEEeCccc--hhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 307 (844)
Q Consensus 230 ~~~DiVwvHDyhl--~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~ 307 (844)
+++|+|..=||.= +.+.+.+|++++..||.++. ++.+|.==++|-..++.....=+..| .+-..|.+.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~D~ll~if---PFE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYVDHLLVIF---PFEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHHhheeECC---cccHHHHhc--
Confidence 3568888888774 35888999998888888765 34444322445444443322211111 111222210
Q ss_pred HHhCcccCCCceeeCCeEEEEEEEecccChhHHhhhhcCCchHHHHHHHHHHh--CCCcEE-EE-EecccccCCH-HHHH
Q 003145 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM-LG-VDRLDMIKGI-PQKL 382 (844)
Q Consensus 308 ~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vi-l~-VdRld~~KGi-~~~l 382 (844)
.|++ ..|=|++ =+|.- .+ ... ....++.+ .++++| +. =+|-...|-+ +..+
T Consensus 151 --~g~~-----~~~VGHP--------l~d~~--~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGHP--------LLDEV--KP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECCc--------chhhh--cc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 0100 1122221 12221 11 111 11122222 344433 33 3477655554 8889
Q ss_pred HHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcE
Q 003145 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (844)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv 462 (844)
+|.+++.+++|+++ +++...+. .. .+.+.+.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999864 54433221 11 22233332222211 123321 2456778999999
Q ss_pred EEEcCCCcCCChhHhhhhhcccCCCceEEE-----------------eCCCCchhhc-cCC---eEEECCCCHHHHHHHH
Q 003145 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLIL-----------------SEFAGAAQSL-GAG---AILVNPWNITEVANAI 521 (844)
Q Consensus 463 ~v~~S~~EG~~Lv~~Eama~~~~~~g~lVl-----------------Se~~G~~~~l-g~~---g~lvnP~d~~~~A~ai 521 (844)
.+++| |.+.+|++..+ .|.|+ ..+.|....+ |.. =++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99998 78999999986 44443 2333444333 211 1223446889999999
Q ss_pred HHHhcCCHH
Q 003145 522 ARALNMSPE 530 (844)
Q Consensus 522 ~~aL~m~~~ 530 (844)
..+|.+++.
T Consensus 335 ~~ll~~~~~ 343 (373)
T PF02684_consen 335 LELLENPEK 343 (373)
T ss_pred HHHhcCHHH
Confidence 999987653
No 165
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.90 E-value=0.026 Score=55.37 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=57.0
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEE
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 665 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~li 665 (844)
.++...|-|++|+|.||++.. ....+|++++-+.++.. .|..|+|+|.-+..-+..+...+++.+|
T Consensus 23 L~~~Gikgvi~DlDNTLv~wd-------------~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~fi 88 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPWD-------------NPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVPFI 88 (175)
T ss_pred HHHcCCcEEEEeccCceeccc-------------CCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCcee
Confidence 445678999999999999984 35578999999999998 6999999999999999988888877665
No 166
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=95.63 E-value=0.88 Score=50.47 Aligned_cols=215 Identities=13% Similarity=0.145 Sum_probs=120.9
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
||++++..--+..+-+|+-||=|+||-+++. .-..+..++.-|-+|-+ .|..|.|+|.=.+....++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHH
Confidence 4556666554555789999999999999863 22345556666666666 4999999999888876655
Q ss_pred hccc-C------------------c-eEEeecceEEEec-----------CCeeeecccccCChHHH-HHHHHHHHH---
Q 003145 657 FQEY-N------------------L-WLAAENGMFLRCT-----------TGKWMTTMPEHLNMEWV-DSLKHVFEY--- 701 (844)
Q Consensus 657 ~~~l-~------------------l-~liaenG~~i~~~-----------~~~w~~~~~~~~~~~w~-~~v~~i~~~--- 701 (844)
...+ + + .+-+|--+.++.. ..+|.. | ....|. +.+.++++.
T Consensus 200 ~~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~--~--~m~~W~~~dI~~lLD~AE~ 275 (408)
T PF06437_consen 200 EERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL--P--EMKTWSEEDITELLDIAEA 275 (408)
T ss_pred HHHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC--c--cccCcCHHHHHHHHHHHHH
Confidence 5443 1 1 2334444444431 224532 1 112453 244444432
Q ss_pred ----HHh--cCCCceEeeccceEEEEeecCChhhhHHHH----HHHHHHHhcCC--CCCCCeEEEEcCc--EEEEEeCCC
Q 003145 702 ----FTE--RTPRSHFEQRETSLVWNYKYADVEFGRIQA----RDMLQHLWTGP--ISNASVEVVQGSK--SVEVRAVGV 767 (844)
Q Consensus 702 ----~~~--rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa----~el~~~L~~~~--~~~~~~~v~~g~~--~vEV~p~gv 767 (844)
... +.| ..|-.|+-++..--.. .......|. -.+++.| +.. -..-++-...|.+ +|+| -
T Consensus 276 ~L~~~~~~l~Lp-a~IiRK~RAVGivP~~-~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----G 348 (408)
T PF06437_consen 276 ALRDCVKRLNLP-ATIIRKERAVGIVPKP-GVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----G 348 (408)
T ss_pred HHHHHHHHcCCC-eeEEeecceeeEecCC-CCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----C
Confidence 222 234 4455666655443211 111112222 2334444 221 1234555666544 5666 3
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEee-C---CCchhhc---cCcEEEeCCCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGH-F---LGKVLLT---QFLIQVGSSIN 817 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD-~---~~nDMf~---g~~Iavgna~~ 817 (844)
||.-++..+.+.+. +...+.+.+++-+|| | +-||.-. +.++.+.|-.+
T Consensus 349 dKs~GV~~lQ~y~~--~~~~i~~~~tLHVGDQF~s~GaNDfkaR~a~~t~WIasP~E 403 (408)
T PF06437_consen 349 DKSLGVRALQKYFD--PEGGIKPSETLHVGDQFLSAGANDFKARLACTTAWIASPQE 403 (408)
T ss_pred CcHHhHHHHHHHHH--hccCCCccceeeehhhhhccCCcchhhhhhceeeEecCHHH
Confidence 78889988888881 111278899999999 3 3488433 66777766443
No 167
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.61 E-value=0.016 Score=56.47 Aligned_cols=54 Identities=19% Similarity=0.187 Sum_probs=39.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
+.++||+||||++..... .... ....++-+.+.++|+.|.+ .|..++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~--~~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRS--LDDWQLRPGAVPALLTLRA-AGYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCC--HHHeEEcCChHHHHHHHHH-CCCEEEEEeCCCc
Confidence 478999999999874210 0011 1234567889999999987 5999999998763
No 168
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=95.54 E-value=0.35 Score=55.89 Aligned_cols=203 Identities=13% Similarity=0.128 Sum_probs=104.5
Q ss_pred EecccChhHHhhhhcCCc-hHHH-HHHHHHHh---CCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEE
Q 003145 331 FPIGIDSERFIRALEINP-VQVH-IKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (844)
Q Consensus 331 ~P~GID~~~f~~~~~~~~-~~~~-~~~lr~~~---~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~ 405 (844)
+-+|.-.......+...+ +... +..-|+.| .+..++.+..++ .|=-+..++++.++|+.-|+-+ |++..
T Consensus 248 ~~~~~~~~~~~~~~~~g~~~~~~~v~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~ 321 (468)
T PF13844_consen 248 VQNGLATTQTNNKAATGEEVPQNIVVTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLR 321 (468)
T ss_dssp EEECCGHHHH-HHHHTTSS--SSEEEEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEE
T ss_pred eecccchhhhhccccCCccCCccccccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEee
Confidence 467777766654433221 1100 01124445 244444445564 5667999999999999999754 76665
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccC
Q 003145 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (844)
Q Consensus 406 ~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~ 485 (844)
.|. ... +.+.+.+.+ .|-. -..++| .+..+.++..+.|+.+||+|-|..+-| +.+.+||+.+
T Consensus 322 ~~~--~~~------~~l~~~~~~----~Gv~-~~Ri~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm--- 383 (468)
T PF13844_consen 322 FPA--SGE------ARLRRRFAA----HGVD-PDRIIF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM--- 383 (468)
T ss_dssp TST--THH------HHHHHHHHH----TTS--GGGEEE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH---
T ss_pred CCH--HHH------HHHHHHHHH----cCCC-hhhEEE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc---
Confidence 443 111 223333332 2321 224665 667788999999999999999987766 5678999999
Q ss_pred CCceEEEeCCCCc-h-----hhc---cCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH---hcCHHHHHH
Q 003145 486 KKGVLILSEFAGA-A-----QSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT---THTAQEWAE 553 (844)
Q Consensus 486 ~~g~lVlSe~~G~-~-----~~l---g~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~v~---~~~~~~W~~ 553 (844)
|++|+|--+-. + ..| |-.-++ ..|.++..+.-.++.+++ +.++...+++++... -++...|++
T Consensus 384 --GVPvVTl~G~~~~sR~~aSiL~~lGl~ElI--A~s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar 458 (468)
T PF13844_consen 384 --GVPVVTLPGETMASRVGASILRALGLPELI--ADSEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFAR 458 (468)
T ss_dssp --T--EEB---SSGGGSHHHHHHHHHT-GGGB---SSHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHH
T ss_pred --CCCEEeccCCCchhHHHHHHHHHcCCchhc--CCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHH
Confidence 67776632211 1 111 322222 246677666656665644 344444445554442 268888888
Q ss_pred HHHHHHHHh
Q 003145 554 TFVSELNDT 562 (844)
Q Consensus 554 ~fl~~l~~~ 562 (844)
.|...+...
T Consensus 459 ~lE~a~~~m 467 (468)
T PF13844_consen 459 NLEAAYRQM 467 (468)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 887777653
No 169
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=95.44 E-value=0.68 Score=51.71 Aligned_cols=157 Identities=16% Similarity=0.143 Sum_probs=88.9
Q ss_pred HHHHh----CCCcEEEEEe-cc-cccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHh
Q 003145 356 LQETF----AGRKVMLGVD-RL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 429 (844)
Q Consensus 356 lr~~~----~~~~vil~Vd-Rl-d~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~I 429 (844)
.|+++ ..+.+.+.-| |- +-..-++-.++|++++.+++|+++ ++.-..+ +.|+.++.+.. ..-
T Consensus 178 ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~---~~~ 245 (381)
T COG0763 178 AREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEAL---KWE 245 (381)
T ss_pred HHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHh---hcc
Confidence 55555 2344444444 43 444556777889999998999976 4432221 33333333221 110
Q ss_pred hcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc-----------
Q 003145 430 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----------- 498 (844)
Q Consensus 430 N~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~----------- 498 (844)
.. .+.. .+...+....+.+||+.+..| |.+.+|++.|+ .|.|++--...
T Consensus 246 ~~-------~~~~----~~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk 305 (381)
T COG0763 246 VA-------GLSL----ILIDGEKRKAFAAADAALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVK 305 (381)
T ss_pred cc-------CceE----EecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhcc
Confidence 00 0111 123456778899999999998 78999999996 56666533222
Q ss_pred ------hhhccCCeEEECC------CCHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHhc
Q 003145 499 ------AQSLGAGAILVNP------WNITEVANAIARALNMSP--EEREKRHWHNFTHVTTH 546 (844)
Q Consensus 499 ------~~~lg~~g~lvnP------~d~~~~A~ai~~aL~m~~--~er~~r~~~~~~~v~~~ 546 (844)
...+ .+-.+| | ..++.+|.++..++..+. ++..+....++..+++.
T Consensus 306 ~~yisLpNIi-~~~~iv-PEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 306 LPYVSLPNIL-AGREIV-PELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred CCcccchHHh-cCCccc-hHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 2222 111111 2 247889999999998762 23334445555555555
No 170
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=95.42 E-value=0.055 Score=57.61 Aligned_cols=94 Identities=22% Similarity=0.333 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCccchhHHHHHHhcCC------CCeEEEEEecC-CCC---hhhhh--cCCcc
Q 003145 211 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FPS---SEIHR--TLPSR 278 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~------~~~i~~flH~P-fp~---~e~~r--~lp~r 278 (844)
..-|.-.+++-++.+...-...|||++||+|-.++|.+||.... ++++.+++|.. |.. .+.+. .+|+.
T Consensus 113 ~~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~ 192 (245)
T PF08323_consen 113 AERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDE 192 (245)
T ss_dssp HHHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGG
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHH
Confidence 34444444544444444212579999999999999999998753 69999999974 221 12221 23321
Q ss_pred --------------HHHHHhhhcCCEEEEecHHHHHHHHH
Q 003145 279 --------------SDLLRAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 279 --------------~~ll~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
..+-.|+..||.|..-++.|++--++
T Consensus 193 ~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 193 YFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24566789999999999998876543
No 171
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.26 E-value=0.059 Score=53.98 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=47.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~~l~l 662 (844)
-..+++++|+||||+... ...+.+.+.++|++|.+ .|..++|+|+.+ ...+..+...+++
T Consensus 23 ~~v~~vv~D~Dgtl~~~~-------------~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPD-------------HNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCCEEEEecCCccccCC-------------CCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 467999999999999763 23577899999999987 589999999998 4555555555443
No 172
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=95.21 E-value=0.043 Score=53.66 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=46.7
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCcc-HHH----HHh-hhcCCEEEEecHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDL----LRA-VLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r-~~l----l~~-ll~aDlIgf~t~~~~~~Fl~ 304 (844)
+.|+|++|.++...+...... +.|+.+++|.+++.........+. ..+ ... .-.+|.+..-+....+.+.+
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~~ 156 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELIK 156 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHHH
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHHH
Confidence 569999999887765544433 889999999987431111111111 111 111 23578877766544444332
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecccChhHHh
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 341 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~GID~~~f~ 341 (844)
+|. ...++.++|+|||.+.|+
T Consensus 157 -----~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 157 -----FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp -----HT-------------SS-EEE----B-CCCH-
T ss_pred -----hCC-----------cccCCEEEECCccHHHcC
Confidence 221 235799999999999884
No 173
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=95.17 E-value=0.052 Score=57.40 Aligned_cols=71 Identities=10% Similarity=-0.009 Sum_probs=47.7
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCcc-----c----------------cccccCCChhHHHHHHHhh
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQ-----I----------------REMELKLHPDLKQPLNALC 635 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~-----~----------------~~~~~~~~~~~~~~L~~L~ 635 (844)
..++++.++....+...|+||+|||+++.....-. +.+ . ......|-+.+++.|+.|.
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~-~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWR-GKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchhee-eeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 46777777664444558999999999974321100 000 0 0123456667999999998
Q ss_pred cCCCCcEEEEcCCC
Q 003145 636 HDPKTTIVVLSGSD 649 (844)
Q Consensus 636 ~d~g~~V~I~SGR~ 649 (844)
+ .|..++++|||+
T Consensus 128 ~-~G~~I~iVTnR~ 140 (237)
T PRK11009 128 K-RGDSIYFITGRT 140 (237)
T ss_pred H-CCCeEEEEeCCC
Confidence 7 599999999996
No 174
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=95.07 E-value=2.2 Score=47.14 Aligned_cols=168 Identities=18% Similarity=0.175 Sum_probs=102.2
Q ss_pred EEEEEEecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEe-cccccCCHHHHHHHHHHHHHhCcCCCCceEEEEE
Q 003145 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 404 (844)
Q Consensus 326 ~~v~v~P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i 404 (844)
..+-.+|.-+|+..-.... ......++-+-|| .-|++-+....|+++.+... . ++.++.
T Consensus 160 ~~~lyfPt~m~~~~~~~~~-------------~~~~~~~ltILvGNSgd~sNnHieaL~~L~~~~~--~----~~kIiv- 219 (360)
T PF07429_consen 160 ASLLYFPTRMDPALTLSEK-------------NKKNKGKLTILVGNSGDPSNNHIEALEALKQQFG--D----DVKIIV- 219 (360)
T ss_pred ceEEEcCCCCchhhhcccc-------------ccCCCCceEEEEcCCCCCCccHHHHHHHHHHhcC--C----CeEEEE-
Confidence 3466788878765322110 0111233334444 66888888888777765432 1 233322
Q ss_pred EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcc
Q 003145 405 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQ 483 (844)
Q Consensus 405 ~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~ 483 (844)
|- +-+..++++.++|.+...++ ||.. .+..++..++.+|+.++++.||++++... ..|+|..++ .+.+|
T Consensus 220 --PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~G 289 (360)
T PF07429_consen 220 --PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQLG 289 (360)
T ss_pred --EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHcC
Confidence 21 11112345666776665553 4422 25556889999999999999999999997 599998654 34453
Q ss_pred cCCCceEEEeCCCCchhhccCCeEEE----CCCCHHHHHHHHHHHhcC
Q 003145 484 DLKKGVLILSEFAGAAQSLGAGAILV----NPWNITEVANAIARALNM 527 (844)
Q Consensus 484 ~~~~g~lVlSe~~G~~~~lg~~g~lv----nP~d~~~~A~ai~~aL~m 527 (844)
.++++|+-.-....+.+-++.| +.-|...+++|=+++...
T Consensus 290 ----~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql~~~ 333 (360)
T PF07429_consen 290 ----KKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQLANV 333 (360)
T ss_pred ----CeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHHhhC
Confidence 7899999888777773345433 445666666665555443
No 175
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=94.94 E-value=0.11 Score=56.07 Aligned_cols=65 Identities=8% Similarity=-0.078 Sum_probs=44.9
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCC---CC----cchhhhcCCHHHHH
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSS---IN----SLSKEKKRKVHQLF 831 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna---~~----~~a~~~l~~~~~v~ 831 (844)
+.+-.+..+++.++++++ ++++.+++||| +.+| +-+ |+ ++.|..+ .+ ..+.+.++++.++.
T Consensus 154 ~~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~ 226 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALL 226 (272)
T ss_pred CCCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHH
Confidence 334556788999999998 67899999999 8899 333 43 3444332 11 24556788888887
Q ss_pred HHHH
Q 003145 832 GIFL 835 (844)
Q Consensus 832 ~~l~ 835 (844)
.++.
T Consensus 227 ~~~~ 230 (272)
T PRK13223 227 PGCA 230 (272)
T ss_pred HHHh
Confidence 6543
No 176
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.90 E-value=0.026 Score=56.78 Aligned_cols=52 Identities=10% Similarity=0.116 Sum_probs=38.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~ 650 (844)
|++|+|.||||+...+.. . ...+..+-|.+.++|++|.+ .|.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~--~~~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----H--EIDNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----C--CHHHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999543211 0 01345567889999999987 5999999997753
No 177
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.77 E-value=0.025 Score=51.57 Aligned_cols=50 Identities=14% Similarity=0.243 Sum_probs=36.5
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
|+||+||||... ..+-|...++|++|.+ .|..++++|..+...-+.+.+.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~ 50 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKK 50 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHH
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHH
Confidence 689999999975 2356778999999998 5899999998765554444444
No 178
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.71 E-value=0.11 Score=54.28 Aligned_cols=59 Identities=10% Similarity=0.087 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----c---CcEEEeCC-C----CcchhhhcCCHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----Q---FLIQVGSS-I----NSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g---~~Iavgna-~----~~~a~~~l~~~~~v~~~l~ 835 (844)
-..+..+++.++ .+++.++++|| +.+||.. | .+|..|.. . ...+.+.++++.++..+|.
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 355667778887 44579999999 9999665 3 44555542 1 2346678999999988774
No 179
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=94.57 E-value=0.024 Score=54.98 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE 822 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~ 822 (844)
-+|-.+.+.|+++++ +.++++.++|| |.+| +|+ |+++++.+|.+.+.++
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGls~a~~dAh~~v~~~ 134 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGLSVAVADAHPLLKQR 134 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCCcccccccCHHHHHh
Confidence 489999999999999 78999999999 9999 666 9999999999877644
No 180
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=94.48 E-value=4.5 Score=45.73 Aligned_cols=72 Identities=22% Similarity=0.135 Sum_probs=51.4
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh-c--cCCeEEECCCCHHHH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-L--GAGAILVNPWNITEV 517 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~-l--g~~g~lvnP~d~~~~ 517 (844)
+. +.+.++..++.+|++.||+++-.|. |. ..||.+.+ .|+|. . |-.++ + |.+.++| +.|.+++
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----gg-i~EA~~lg----~Pvv~--l-~~R~e~~~~g~nvl~v-g~~~~~I 329 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----SG-IIEAPSFG----VPTIN--I-GTRQKGRLRADSVIDV-DPDKEEI 329 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----hH-HHhhhhcC----CCEEe--e-cCCchhhhhcCeEEEe-CCCHHHH
Confidence 44 5899999999999999999995542 12 27999985 44442 1 22333 2 4556668 6789999
Q ss_pred HHHHHHHhc
Q 003145 518 ANAIARALN 526 (844)
Q Consensus 518 A~ai~~aL~ 526 (844)
.+++.+++.
T Consensus 330 ~~a~~~~~~ 338 (365)
T TIGR03568 330 VKAIEKLLD 338 (365)
T ss_pred HHHHHHHhC
Confidence 999999654
No 181
>PTZ00445 p36-lilke protein; Provisional
Probab=94.45 E-value=0.11 Score=53.29 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=51.5
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCC----CCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~----~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~ 652 (844)
..+.+.+.++....|+|++|+|-||++.. .+|. .........++|+.+..+.+|.+ .|+.|+|+|=.+...
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKEL 104 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchhh
Confidence 45667788899999999999999999821 1110 01111234578999999999987 599999999776544
No 182
>PLN02954 phosphoserine phosphatase
Probab=94.43 E-value=0.082 Score=55.03 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEE--EeCCC-C----cchhhhcCCHHHHHHHH
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQ--VGSSI-N----SLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Ia--vgna~-~----~~a~~~l~~~~~v~~~l 834 (844)
+-.|..+++.+++.++ .+.+++||| +.+| |-+ +..+. .|... . ..+.+.+++..++..+|
T Consensus 153 ~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 3468899999888876 368999999 9999 433 34433 34321 1 13556788888887654
No 183
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.33 E-value=0.11 Score=51.70 Aligned_cols=65 Identities=20% Similarity=0.228 Sum_probs=48.4
Q ss_pred HHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-cEEEEcCCC-------hhhHHHhh
Q 003145 586 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 657 (844)
Q Consensus 586 y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~I~SGR~-------~~~l~~~~ 657 (844)
.+....|.++||.|.||++.. ...++++..+.++++++.-+. .|+|+|-.. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~~-------------~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPPY-------------EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCCC-------------cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 556789999999999999874 467899999999999975332 599999873 44454444
Q ss_pred cccCce
Q 003145 658 QEYNLW 663 (844)
Q Consensus 658 ~~l~l~ 663 (844)
+.+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444543
No 184
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=94.28 E-value=0.066 Score=54.04 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=39.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
.|+++||.||||...... ..... ....+-+.+.++|++|.+ .|..++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~---~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG---YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCcc---ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 589999999999765321 11222 234567889999999987 589999999876
No 185
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=94.27 E-value=0.076 Score=58.09 Aligned_cols=67 Identities=19% Similarity=0.192 Sum_probs=49.9
Q ss_pred CCeEEEEecCCccCCCCCC-CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 590 NNRLLILGFNATLTEPVDT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.+++++|+||||...... | .+-....+..+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSP---YDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCc---cchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 4679999999999975421 0 000001245678899999999987 59999999999998887777665
No 186
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.19 E-value=0.064 Score=53.29 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=38.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
.|+++||.||||......+ ...+.+ ...++-+.+.++|++|.+ .|.+++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 3689999999999853211 111111 234567889999999987 59999999985
No 187
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.19 E-value=0.044 Score=54.34 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=33.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
|+.+||+||||+.... +..-.+-+..-.-..+.+.++|++|.+ .|..|+|+|--
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeCc
Confidence 6899999999996532 000001111223346679999999987 59999999843
No 188
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.17 E-value=0.072 Score=56.51 Aligned_cols=56 Identities=18% Similarity=0.306 Sum_probs=43.3
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--HhhcccC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEYN 661 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~--~~~~~l~ 661 (844)
+.++++||+||||... ..+-|.+.++|++|.+ .|..++|+|..+....+ +.+..++
T Consensus 7 ~~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred cCCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 4678999999999875 2356889999999997 59999999887765433 5555543
No 189
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=94.08 E-value=12 Score=41.98 Aligned_cols=243 Identities=15% Similarity=0.102 Sum_probs=120.5
Q ss_pred CCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHhhh--cCCEEEEecHHHHHHHHHHHHH
Q 003145 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (844)
Q Consensus 231 ~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ll--~aDlIgf~t~~~~~~Fl~~~~~ 308 (844)
.+|+|.||.=-.-.++..+-...-++||++. |---=+.+.. -|.-++..|-+. -||+-.--|..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 4599999886766666666555668887753 2211111211 233345544433 256666666666666554
Q ss_pred HhCcccCCCceeeCCeEEEEEEE-ecccChhHHhhhhcCCchHHHHHHHHHHhCCCcEEEEEeccccc---CCHHHHHHH
Q 003145 309 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 384 (844)
Q Consensus 309 ~l~~~~~~~~v~~~g~~~~v~v~-P~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~---KGi~~~l~A 384 (844)
.|.+ ..+|.++ .+++|.-........+... ...+.....++.+++..=|.... ......+.+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 1221 1233333 4567754332211111110 11221112334444444344333 345677777
Q ss_pred HHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhCcEEE
Q 003145 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (844)
Q Consensus 385 f~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ADv~v 464 (844)
++.+.+. ++ +.+|...-++ | .....+.+...+++ .+.+ ..+++..++..+++.|+++|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~~---------~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKYD---------NVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT-T---------TEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhcccC---------CEEE-ECCCCHHHHHHHHhcceEEE
Confidence 7777766 43 3354443211 2 22333333333221 2553 67899999999999999998
Q ss_pred EcCCCcCCChhHh-hhhhcccCCCceEEEeCCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhcC
Q 003145 465 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 527 (844)
Q Consensus 465 ~~S~~EG~~Lv~~-Eama~~~~~~g~lVlSe~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~m 527 (844)
--|- .+. ||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 264 gdSs------GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDSS------GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESSH------HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcCc------cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 7763 245 999995 566666666766654 23455675 8999999999999975
No 190
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=93.62 E-value=0.24 Score=59.27 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=51.7
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCC-CcEEEEcCCChhhHHHhhcccCc
Q 003145 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 585 ~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g-~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.....+.+++..||+++..-. ....+-|.+.++|++|.+ .| .+++|+||.+....+...+++++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 34455678888999998775421 234578899999999987 58 99999999999999888887654
No 191
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=93.48 E-value=0.097 Score=55.36 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.0
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc---CCChhhHHHhhcc
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 659 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S---GR~~~~l~~~~~~ 659 (844)
++||+||||.+.. .+-+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999863 234588999999987 589999998 8999988777766
No 192
>PRK10671 copA copper exporting ATPase; Provisional
Probab=93.43 E-value=0.27 Score=61.82 Aligned_cols=68 Identities=15% Similarity=0.191 Sum_probs=49.4
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
..+.+.....+++++-.||+++..-. ....+-+...++|++|.+ .|.+++++||.+....+...+.++
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~lg 688 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEAG 688 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcC
Confidence 34445556678888888998763211 123356778899999987 599999999999988888777654
No 193
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.25 E-value=0.14 Score=57.33 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.5
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
++|+++||.||||+...... ...+. .....+-|.+.++|.+|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~-~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDS-LDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccC-cccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 57899999999999863210 00111 1346778899999999986 69999999984
No 194
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.19 E-value=0.18 Score=49.32 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=48.8
Q ss_pred CCeEEEEecCCccCCCCC---CCCCCCcc-cc--------ccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh
Q 003145 590 NNRLLILGFNATLTEPVD---TPGRRGDQ-IR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~---~p~~~~~~-~~--------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (844)
+++++++|+||||+.... .+.....+ .. .....+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 367899999999998632 11000000 00 1223456789999999974 7999999999999998888
Q ss_pred cccC
Q 003145 658 QEYN 661 (844)
Q Consensus 658 ~~l~ 661 (844)
+.++
T Consensus 79 ~~l~ 82 (148)
T smart00577 79 DLLD 82 (148)
T ss_pred HHhC
Confidence 7754
No 195
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=93.15 E-value=0.12 Score=49.52 Aligned_cols=84 Identities=18% Similarity=0.108 Sum_probs=43.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccH----HHH-HhhhcCCEEEEecHHHHHHHHH
Q 003145 230 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS----DLL-RAVLAADLVGFHTYDYARHFVS 304 (844)
Q Consensus 230 ~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~----~ll-~~ll~aDlIgf~t~~~~~~Fl~ 304 (844)
.+.|+|++|+++..+++.++++. .++|+.+.+|..+.... .++.. .+. ..+-.||.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877778777733 37999999997543221 11212 222 2344689998888776666554
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEEecc
Q 003145 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 334 (844)
Q Consensus 305 ~~~~~l~~~~~~~~v~~~g~~~~v~v~P~G 334 (844)
.| ....+|.++|+|
T Consensus 147 -----~g-----------~~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YG-----------VPPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hC-----------CCCCcEEEeCcC
Confidence 12 123578889987
No 196
>PRK06769 hypothetical protein; Validated
Probab=93.03 E-value=0.098 Score=52.56 Aligned_cols=53 Identities=15% Similarity=0.165 Sum_probs=39.5
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~ 649 (844)
+..|+|++|.||||....... ......+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~-------~~~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIH-------YPGSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCC-------CHHHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 457999999999997652100 00234567899999999987 589999999864
No 197
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=92.84 E-value=0.089 Score=54.85 Aligned_cols=62 Identities=11% Similarity=0.019 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhccCcEEEeCC-------CCcchhhhcCCHHHHHHHHHHH
Q 003145 767 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLTQFLIQVGSS-------INSLSKEKKRKVHQLFGIFLRF 837 (844)
Q Consensus 767 vnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~g~~Iavgna-------~~~~a~~~l~~~~~v~~~l~~~ 837 (844)
..|..+++.+ + ..++.+++||| +.+| +.+..++.+... ....+-..+++-.++...|+.+
T Consensus 147 ~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~ 215 (219)
T PRK09552 147 CCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTELKHL 215 (219)
T ss_pred CchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHHHHHH
Confidence 4577666543 3 34678999999 9999 444333333321 1122334578888888888776
Q ss_pred hh
Q 003145 838 SY 839 (844)
Q Consensus 838 ~~ 839 (844)
.+
T Consensus 216 ~~ 217 (219)
T PRK09552 216 LE 217 (219)
T ss_pred hc
Confidence 54
No 198
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=92.80 E-value=2.9 Score=47.84 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=79.0
Q ss_pred EEEEec-ccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhc---------ccCC
Q 003145 366 MLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING---------RFGT 435 (844)
Q Consensus 366 il~VdR-ld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~---------~~g~ 435 (844)
|+.-+| =+-.++++..++|++.+.++ |+ +.++....+. ..++.+++.+.+. .++. .|..
T Consensus 210 lLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~ 278 (396)
T TIGR03492 210 LLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLFQK 278 (396)
T ss_pred EECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhhcc
Confidence 344557 45667889999999998655 44 4455444332 2233343333211 1110 0000
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc------hhh---ccCCe
Q 003145 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGA 506 (844)
Q Consensus 436 ~~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~------~~~---lg~~g 506 (844)
..+.++ ....+...+|+.||++|..|= .+..|+++++ .|.|+--+.+- .+. +-..+
T Consensus 279 ---~~~~v~---~~~~~~~~~l~~ADlvI~rSG-----t~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~ 343 (396)
T TIGR03492 279 ---GTLEVL---LGRGAFAEILHWADLGIAMAG-----TATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGS 343 (396)
T ss_pred ---CceEEE---echHhHHHHHHhCCEEEECcC-----HHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCE
Confidence 012221 123678999999999999863 5669999996 56666543221 111 10245
Q ss_pred EEECCCCHHHHHHHHHHHhcCC
Q 003145 507 ILVNPWNITEVANAIARALNMS 528 (844)
Q Consensus 507 ~lvnP~d~~~~A~ai~~aL~m~ 528 (844)
+.+...+.+.+++++.++|+++
T Consensus 344 ~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 344 VFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred EecCCCCHHHHHHHHHHHHcCH
Confidence 5555678899999999999853
No 199
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=92.66 E-value=0.19 Score=59.14 Aligned_cols=70 Identities=7% Similarity=0.126 Sum_probs=46.8
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCCh------------hhHHH
Q 003145 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR------------NVLDK 655 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~------------~~l~~ 655 (844)
.+.|+++||+||||..... .+ .. ..+..-..+.+.+.++|++|.+ .|..++|+|..+. ..+..
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~--~~-~~~~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~ 241 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKV--FP-KGPDDWQIIFPEIPEKLKELEA-DGFKICIFTNQGGIARGKINADDFKAKIEA 241 (526)
T ss_pred ccCcEEEEECCCCccccCCCcc--CC-CCHHHeeecccCHHHHHHHHHH-CCCEEEEEECCcccccCcccHHHHHHHHHH
Confidence 4579999999999996521 00 00 0001112257889999999987 5999999998665 23556
Q ss_pred hhcccCc
Q 003145 656 NFQEYNL 662 (844)
Q Consensus 656 ~~~~l~l 662 (844)
+++.+++
T Consensus 242 iL~~lgi 248 (526)
T TIGR01663 242 IVAKLGV 248 (526)
T ss_pred HHHHcCC
Confidence 6666654
No 200
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=92.63 E-value=0.19 Score=51.53 Aligned_cols=53 Identities=13% Similarity=0.033 Sum_probs=39.6
Q ss_pred CceEEEEeeCCCch--hhc--cCcEEEeCCCCc---chhh-hcCCHHHHHHHHHHHhhccCC
Q 003145 790 IDYVLCIGHFLGKV--LLT--QFLIQVGSSINS---LSKE-KKRKVHQLFGIFLRFSYSGVQ 843 (844)
Q Consensus 790 ~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~---~a~~-~l~~~~~v~~~l~~~~~~~~~ 843 (844)
.+.+++||| +.+| |.+ +.++.++..... .+.+ .++++.++..+|...+.+..+
T Consensus 144 ~~~~v~iGD-s~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~~ 204 (205)
T PRK13582 144 GYRVIAAGD-SYNDTTMLGEADAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKASARALS 204 (205)
T ss_pred CCeEEEEeC-CHHHHHHHHhCCCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHhhccC
Confidence 468999999 9999 555 778877654221 2233 699999999999998887665
No 201
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=92.62 E-value=0.33 Score=49.34 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
+|+.+++++++.++ .+++.++++|| +.+| |.+ |.+++++..
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCCeEEECCC
Confidence 48899999999888 67889999999 9999 666 888888663
No 202
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.50 E-value=0.27 Score=49.48 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.9
Q ss_pred CeEEEEecCCccCCCCCC-----CCCCCcccc-------ccccCCChhHHHHHHHhhcCCCCcEEEEcCC-ChhhHHHhh
Q 003145 591 NRLLILGFNATLTEPVDT-----PGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 657 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~-----p~~~~~~~~-------~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR-~~~~l~~~~ 657 (844)
.||++||+|+||.+..-. |-...++.. .....+-+.+.++|+.|.+ .|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999976421 100011111 1234567889999999987 59999999998 788777776
Q ss_pred cccC
Q 003145 658 QEYN 661 (844)
Q Consensus 658 ~~l~ 661 (844)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 6654
No 203
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=92.46 E-value=0.22 Score=51.52 Aligned_cols=62 Identities=13% Similarity=0.039 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCC--C-Cc----chhhhcCCHHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSS--I-NS----LSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna--~-~~----~a~~~l~~~~~v~~~l~~ 836 (844)
|...+.+++++++ .+++.+++||| +.+|+.. |+ .|.+..+ . ++ .+.+.++++.++..++.+
T Consensus 140 ~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~ 212 (214)
T PRK13288 140 DPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIVGD 212 (214)
T ss_pred CcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHHhh
Confidence 4445667777777 56789999999 8888333 33 2233222 1 12 255678999998887765
Q ss_pred H
Q 003145 837 F 837 (844)
Q Consensus 837 ~ 837 (844)
+
T Consensus 213 ~ 213 (214)
T PRK13288 213 M 213 (214)
T ss_pred c
Confidence 3
No 204
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=92.08 E-value=0.16 Score=53.17 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=47.0
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cc----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh---HH
Q 003145 590 NNRLLILGFNATLTEPVDTPGR--RG------DQ----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 654 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~--~~------~~----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~---l~ 654 (844)
++-.++||+|-|+++..+.-.. .+ .. +....+.+-+.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4568999999999975310000 00 00 112456777899999999988 599999999999765 44
Q ss_pred Hhhcc
Q 003145 655 KNFQE 659 (844)
Q Consensus 655 ~~~~~ 659 (844)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 45544
No 205
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=91.98 E-value=0.22 Score=49.53 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=30.6
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT 806 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~ 806 (844)
+.+.+|+.+++.+++.++ ++++.++++|| +.+| |++
T Consensus 138 ~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~ 175 (177)
T TIGR01488 138 PEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLK 175 (177)
T ss_pred CCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHh
Confidence 567899999999998877 67889999999 9999 543
No 206
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=91.95 E-value=0.59 Score=55.97 Aligned_cols=63 Identities=21% Similarity=0.338 Sum_probs=49.6
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
....+.+.++.||+++..-. ....+.|.+.++|++|.+ .|.+++|+||......+...+.+++
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~-----------~~d~l~~~a~e~i~~Lk~-~Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA-----------LEDQLRPEAKEVIQALKR-RGIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE-----------ecccccHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 34567889999999875421 134577899999999988 5999999999999988888877654
No 207
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=91.95 E-value=0.44 Score=56.78 Aligned_cols=62 Identities=16% Similarity=0.266 Sum_probs=47.2
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC-cEEEEcCCChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~-~V~I~SGR~~~~l~~~~~~l~l 662 (844)
...+.+++-.||++...-. ....+-+.+.++|++|.+ .|. +++++||.+....+...+++++
T Consensus 340 ~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred CCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 3446667777887765321 234577899999999987 589 9999999999999888887654
No 208
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=91.93 E-value=16 Score=41.25 Aligned_cols=91 Identities=20% Similarity=0.186 Sum_probs=58.3
Q ss_pred HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCch--hh------c-c-CCeEEECCCC--HHHHH
Q 003145 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L-G-AGAILVNPWN--ITEVA 518 (844)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~--~~------l-g-~~g~lvnP~d--~~~~A 518 (844)
+++.++|++||+++.=|= ++++.|..|++ .|.|+=-+...+ ++ + . ..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRaG----a~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRAG----ALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCCc----ccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 569999999999886543 58899999996 566665555552 22 2 1 2466665544 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHH
Q 003145 519 NAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (844)
Q Consensus 519 ~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (844)
+.|.++++.+ +...+|..+.++........+
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhcCCCCHHHH
Confidence 9999999863 333344344444334333333
No 209
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=91.78 E-value=0.3 Score=52.51 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=47.9
Q ss_pred cCCeEEEEecCCccCCCCCCCC-----CCC---ccc----cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH--
Q 003145 589 SNNRLLILGFNATLTEPVDTPG-----RRG---DQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD-- 654 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~-----~~~---~~~----~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~-- 654 (844)
.++..|+||+|+|+++....-+ ..+ ... ......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHHH
Confidence 4567899999999986542100 000 001 01334566889999999987 59999999999855443
Q ss_pred -HhhcccCc
Q 003145 655 -KNFQEYNL 662 (844)
Q Consensus 655 -~~~~~l~l 662 (844)
.++...++
T Consensus 152 ~~~Lkk~Gi 160 (266)
T TIGR01533 152 LKNLKRFGF 160 (266)
T ss_pred HHHHHHcCc
Confidence 55555444
No 210
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=91.47 E-value=0.44 Score=51.22 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=18.3
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPV 606 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~ 606 (844)
+...-.....++|+||+||||+++.
T Consensus 15 ~~~~~~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 15 LRQHRLGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred HHHHHhcCCceEEEEeCCCceeCCc
Confidence 3333334567899999999999873
No 211
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=91.29 E-value=21 Score=39.23 Aligned_cols=124 Identities=18% Similarity=0.165 Sum_probs=81.9
Q ss_pred cEEEEEe-cccccCCHHHHHHHHHHHHHhCcCCCCceEEEEE-EcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 364 KVMLGVD-RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI-AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 364 ~vil~Vd-Rld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i-~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
++.+-|| .=|++-+..+.|+++.+++.+ ++.++.- +.|+ ++ + ++.++|.+...+ .||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn-~---~Yi~~V~~~~~~---lF~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN-Q---AYIEEVRQAGLA---LFGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC-H---HHHHHHHHHHHH---hcCcc---cE
Confidence 4444455 668999999999988777543 2334332 2232 22 3 445666665554 35422 35
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCC-CcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEE
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 509 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lv 509 (844)
..++..++.+|+.++++.||+.++.-- ..|+|..++=. ..| .|+++|+-.-.-..+-+-|+-|
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~G----~~v~l~r~n~fwqdl~e~gv~V 272 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QLG----KPVVLSRDNPFWQDLTEQGLPV 272 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HCC----CcEEEecCCchHHHHHhCCCeE
Confidence 667899999999999999999998875 69999876643 332 6888887776666663445444
No 212
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.12 E-value=20 Score=40.60 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=49.0
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc----hhhc-c-CCeEEECCC--CHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSL-G-AGAILVNPW--NIT 515 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~----~~~l-g-~~g~lvnP~--d~~ 515 (844)
+.+.++..+ ++..||++| .+-|+ -+..|++++| .|+|+.-..+= +..+ . ..|+.+++. +.+
T Consensus 292 ~~~~~p~~~---ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHDW---LLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHHH---Hhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 466777654 578899999 45665 5679999996 66666655441 2222 1 135555554 689
Q ss_pred HHHHHHHHHhc
Q 003145 516 EVANAIARALN 526 (844)
Q Consensus 516 ~~A~ai~~aL~ 526 (844)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
No 213
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=90.52 E-value=1 Score=55.71 Aligned_cols=68 Identities=15% Similarity=0.184 Sum_probs=53.5
Q ss_pred HHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 583 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+.+.....+.+++-+||+++..-. ....+-++..++|++|.+ .|..++++||........+.+++++
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~-----------l~d~~r~~a~~~i~~L~~-~gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA-----------LQDTLRADARQAISELKA-LGIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE-----------EecCCchhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3456666778888889998775321 234567899999999988 5999999999999999988888665
No 214
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=90.47 E-value=0.21 Score=51.74 Aligned_cols=59 Identities=14% Similarity=-0.007 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcccCcCCCC-CceEEEEeeCCCchhhc----cCcE--EEeCCC---Cc----chhhhcCCHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTA-IDYVLCIGHFLGKVLLT----QFLI--QVGSSI---NS----LSKEKKRKVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~-~d~vlaiGD~~~nDMf~----g~~I--avgna~---~~----~a~~~l~~~~~v~~~l 834 (844)
+...+..++++++ .. ++.+++||| +..|+-. |+.+ .+.... +. .+.+.++++.++..++
T Consensus 147 ~p~~~~~a~~~~~------~~~~~~~~~igD-~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 147 APDLILRAMELTG------VQDVQSVAVAGD-TPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPALL 219 (220)
T ss_pred CHHHHHHHHHHcC------CCChhHeEEeCC-CHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHhh
Confidence 3445666677776 44 588999999 7788443 5554 332221 11 2344567777665543
No 215
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=90.46 E-value=0.43 Score=49.66 Aligned_cols=53 Identities=13% Similarity=0.025 Sum_probs=31.6
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCchh--hc--cC-cEEEeCCC--C----cchhhhcCCHHHHH
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVL--LT--QF-LIQVGSSI--N----SLSKEKKRKVHQLF 831 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDM--f~--g~-~Iavgna~--~----~~a~~~l~~~~~v~ 831 (844)
.+..+++.++ .+++.+++||| +.+|+ -+ |. .|.+.... + ..+...+.+.+++.
T Consensus 153 ~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred HHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 4567778887 67888999999 77882 22 43 23333221 1 13455566666653
No 216
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=90.09 E-value=1.2 Score=54.20 Aligned_cols=71 Identities=10% Similarity=0.164 Sum_probs=54.4
Q ss_pred HHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 580 ~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
....+.+.+...+.+++-+|++++.... ..-.+-+++++++++|.+ .|.+++++||..........++
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHH
Confidence 3445566666778888888888775421 123467899999999988 5999999999999999888887
Q ss_pred cCc
Q 003145 660 YNL 662 (844)
Q Consensus 660 l~l 662 (844)
+++
T Consensus 483 lGI 485 (675)
T TIGR01497 483 AGV 485 (675)
T ss_pred cCC
Confidence 654
No 217
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=89.99 E-value=0.49 Score=49.04 Aligned_cols=60 Identities=10% Similarity=-0.016 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cC-cEEEeCCC---C----cchhhhcCCHHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QF-LIQVGSSI---N----SLSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~-~Iavgna~---~----~~a~~~l~~~~~v~~~l~~ 836 (844)
..++..++++++ .+++.+++||| +.+| +.+ |+ +|.|..+. . ..+.+.++++.++..+|..
T Consensus 152 ~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 557778888887 56789999999 8888 554 43 44554321 1 2355789999999887753
No 218
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=89.88 E-value=0.39 Score=50.30 Aligned_cols=62 Identities=6% Similarity=0.017 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cCc--EEEeCCCC---cchhhhcCCHHHHHHHHHHHh
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QFL--IQVGSSIN---SLSKEKKRKVHQLFGIFLRFS 838 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~~--Iavgna~~---~~a~~~l~~~~~v~~~l~~~~ 838 (844)
-....+++++++ .+++.+++||| +.+|+-. |.. +.|.+... +.+.....+.+++..+|..|.
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 222 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSLM 222 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhhc
Confidence 344566677777 67888999999 8888544 553 44565432 334445677777777776653
No 219
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=89.70 E-value=0.45 Score=46.90 Aligned_cols=63 Identities=11% Similarity=0.092 Sum_probs=43.2
Q ss_pred EEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhH---HHhhccc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL---DKNFQEY 660 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l---~~~~~~l 660 (844)
++++|+||||+.+.- .++-.+- ......+.+.++.+++++ .|..++-+|+|+.... ..|+...
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPILGKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhccCchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHHHHHHHHHHHH
Confidence 478999999998731 1111110 012567889999999987 5999999999997553 4566554
No 220
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=89.65 E-value=0.77 Score=47.67 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=31.4
Q ss_pred CCChhHHHHHH-HhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 622 KLHPDLKQPLN-ALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 622 ~~~~~~~~~L~-~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.+-|.+.+.|+ .+.+ .|..++|+|+.+...++.+....
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHhc
Confidence 45688999995 6775 59999999999999998888653
No 221
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.52 E-value=0.62 Score=51.66 Aligned_cols=65 Identities=22% Similarity=0.231 Sum_probs=48.2
Q ss_pred CCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcc
Q 003145 590 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 659 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~ 659 (844)
..|+|++|+|+||...+- +-|..+- ....+.+.+.+.|++|.+ .|+.++|+|..+...+...+..
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i----~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNL----NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCcccc----ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 368999999999987530 0000000 012345789999999987 6999999999999999998887
No 222
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=89.28 E-value=0.77 Score=45.97 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=23.7
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV 803 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD 803 (844)
+.|..|+..++++++.. ++.++++|| +.+|
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D 174 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTD 174 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-Ccch
Confidence 45678988888886541 578999999 9888
No 223
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=89.21 E-value=10 Score=43.02 Aligned_cols=99 Identities=11% Similarity=0.084 Sum_probs=61.2
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchh----hc-c-CCeEEECC--CCHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ----SL-G-AGAILVNP--WNIT 515 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~----~l-g-~~g~lvnP--~d~~ 515 (844)
+.+.+++. .++..||++|.. -|.| +..|++++| .|+|+.-..+--. .+ . ..|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 46777765 567899998864 4665 679999996 6776654433221 12 1 23555654 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh-cCHHHHHHHH
Q 003145 516 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 555 (844)
Q Consensus 516 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~f 555 (844)
+++++|.++|..+ +.+++.+++.+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 344444555444433 3455555433
No 224
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=89.06 E-value=0.79 Score=47.56 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
..+.|.+.+.|+.|.+ .|..++|+||.....++.+++.+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 3566778888888877 58999999999888888877764
No 225
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=89.04 E-value=0.48 Score=50.76 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=45.0
Q ss_pred CCeEEEEecCCccCCCCCCCCC--CC------cccc-----ccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 590 NNRLLILGFNATLTEPVDTPGR--RG------DQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~--~~------~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
.+-.++||+|+|+++..+.-.. .+ .... ...+.+-|.+++..+.|.+ .|.+|+++|||+-..-...
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHHHHH
Confidence 3568999999999954211000 00 0011 2345667789999999987 5999999999986544333
Q ss_pred hcc
Q 003145 657 FQE 659 (844)
Q Consensus 657 ~~~ 659 (844)
...
T Consensus 179 ~~N 181 (275)
T TIGR01680 179 EAN 181 (275)
T ss_pred HHH
Confidence 333
No 226
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.03 E-value=0.039 Score=58.09 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=52.3
Q ss_pred cCCeEEEEecCCccCCCCCC------------CCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHh
Q 003145 589 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 656 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~ 656 (844)
-++..++||+|+|+++.... |.....-+......+-|.+++.++.+.+ .|..|+++|||+...-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 45678999999999854211 0000000001223445568899999988 5999999999998765555
Q ss_pred hccc-CceEEeecceEEEe
Q 003145 657 FQEY-NLWLAAENGMFLRC 674 (844)
Q Consensus 657 ~~~l-~l~liaenG~~i~~ 674 (844)
...+ ..|+-.-++.+++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 5554 23433435666664
No 227
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.57 E-value=0.76 Score=48.07 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=31.8
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.++-+.+.+.|..|.+ .+..++++|+.+...++..++.++
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~g 124 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARLG 124 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHcc
Confidence 3566778889999987 478999999999888887776653
No 228
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=88.42 E-value=0.52 Score=50.73 Aligned_cols=49 Identities=10% Similarity=0.188 Sum_probs=38.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHH
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~ 654 (844)
+.+.++||+||||... ..+-|...++|++|.+ .|.+++++|-.+...-+
T Consensus 7 ~y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHH
Confidence 4567999999999965 2355789999999998 59999999876654433
No 229
>PRK08238 hypothetical protein; Validated
Probab=87.89 E-value=1 Score=52.77 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc--eEEeecc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 669 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l--~liaenG 669 (844)
.+.+.+++.|+++.+ .|.+++|+||.+...++...+++++ .+++.++
T Consensus 72 p~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 72 PYNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CCChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 356889999999987 6999999999999999988888764 3444443
No 230
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=87.85 E-value=0.95 Score=44.75 Aligned_cols=72 Identities=18% Similarity=0.120 Sum_probs=51.8
Q ss_pred hcCCeEEEEecCCccCCCCCCCCCCCccc---------------------cccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 588 RSNNRLLILGFNATLTEPVDTPGRRGDQI---------------------REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~~~p~~~~~~~---------------------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
..++..+++|+|.||+.....|....... .....++-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 35677899999999998765542110000 00123356789999999985 69999999
Q ss_pred CCChhhHHHhhcccC
Q 003145 647 GSDRNVLDKNFQEYN 661 (844)
Q Consensus 647 GR~~~~l~~~~~~l~ 661 (844)
..+...+...++.++
T Consensus 81 ~~~~~yA~~vl~~ld 95 (156)
T TIGR02250 81 MGTRAYAQAIAKLID 95 (156)
T ss_pred CCcHHHHHHHHHHhC
Confidence 999999998888773
No 231
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=87.81 E-value=1.2 Score=44.71 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=31.0
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+++.+.|+.+.+ .+..|+|+||-+...++..+..+++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~i 128 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLGI 128 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcCC
Confidence 567799999877 5999999999999999888876554
No 232
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=87.80 E-value=0.48 Score=46.58 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCcc-----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 592 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
|+++||+||||+.....+....+. .......+-|.+.+.|+.|++ ...|+|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 689999999999765432100000 001122345778899999865 6999999999999988888776
No 233
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=87.70 E-value=15 Score=41.60 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=50.8
Q ss_pred HHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c---CCeEE-EC-----C-CCHHHH
Q 003145 452 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G---AGAIL-VN-----P-WNITEV 517 (844)
Q Consensus 452 el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g---~~g~l-vn-----P-~d~~~~ 517 (844)
++-.+-|.|.+.|+||.+|..|.++.|.-..| -|-|.+..+|..-.+ . .-|+. |+ | .+++++
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMG----iPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEec----cccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 34557789999999999999999999998884 566777777765443 1 12544 42 2 356777
Q ss_pred HHHHHHHhc
Q 003145 518 ANAIARALN 526 (844)
Q Consensus 518 A~ai~~aL~ 526 (844)
++-|.+...
T Consensus 569 ~~~m~~F~~ 577 (692)
T KOG3742|consen 569 ASFMYEFCK 577 (692)
T ss_pred HHHHHHHHH
Confidence 777777764
No 234
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=87.66 E-value=1.1 Score=50.67 Aligned_cols=38 Identities=18% Similarity=0.271 Sum_probs=27.6
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
+-+.+.+.|+.|.+ .|..++|+|+.+...++..++.++
T Consensus 217 l~pGa~ElL~~Lk~-~GiklaIaSn~~~~~~~~~L~~lg 254 (381)
T PLN02575 217 LRTGSQEFVNVLMN-YKIPMALVSTRPRKTLENAIGSIG 254 (381)
T ss_pred cCcCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcC
Confidence 34566777777776 478888888888887777777654
No 235
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=87.50 E-value=3.8 Score=51.95 Aligned_cols=70 Identities=11% Similarity=0.218 Sum_probs=50.9
Q ss_pred HHHHHHHhcCCeEEEEecCC-----ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 581 DSIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 581 ~~~~~y~~sk~rLi~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
...+.|.....|.+++-+++ |++.... ...++-+.+.++|++|.+ .|.+|+++||-.......
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~ 560 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVS 560 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHH
Confidence 34445666667888887766 3332211 123467899999999987 699999999999999999
Q ss_pred hhcccCc
Q 003145 656 NFQEYNL 662 (844)
Q Consensus 656 ~~~~l~l 662 (844)
..+++++
T Consensus 561 ia~~~Gi 567 (884)
T TIGR01522 561 IARRLGM 567 (884)
T ss_pred HHHHcCC
Confidence 8887653
No 236
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.92 E-value=3.9 Score=45.63 Aligned_cols=117 Identities=15% Similarity=0.223 Sum_probs=79.6
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCC---CcCC---ChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCH
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSL---RDGM---NLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNI 514 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~---~EG~---~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~ 514 (844)
+.++....+....+..++.-|+++.=+. -++. +.-+.|+++|+ |+++.+--.+.-..++.+--++--.|.
T Consensus 239 ~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~----~~liT~~~~~~e~~f~pgk~~iv~~d~ 314 (373)
T COG4641 239 VQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCG----GFLITDYWKDLEKFFKPGKDIIVYQDS 314 (373)
T ss_pred hhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcC----CccccccHHHHHHhcCCchheEEecCH
Confidence 3333333344677777777777775443 2333 88899999996 777766666555555443223335789
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHh
Q 003145 515 TEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (844)
Q Consensus 515 ~~~A~ai~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 562 (844)
.++.+.+..++.-+ +||++..+.+++.| ..|+-..=+..++..+..+
T Consensus 315 kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 315 KDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred HHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 99999999999875 48888888887776 5577777777777766653
No 237
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=86.71 E-value=2 Score=55.11 Aligned_cols=40 Identities=3% Similarity=0.014 Sum_probs=35.3
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.++-+++.++|++|.+ .|+.|+++|||....+....++++
T Consensus 567 Dplr~~v~~aI~~l~~-~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRS-AGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred CCChHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcC
Confidence 3567899999999998 599999999999999998888754
No 238
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=86.28 E-value=1.2 Score=49.29 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=36.9
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCC----CCcEEEEc---CCChhhHHHhh-ccc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF-QEY 660 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~----g~~V~I~S---GR~~~~l~~~~-~~l 660 (844)
.|+||+||||.... .+-+...++|+.|.+ . +..++++| |++.....+.+ +.+
T Consensus 2 ~~ifD~DGvL~~g~---------------~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l~~~l 61 (321)
T TIGR01456 2 GFAFDIDGVLFRGK---------------KPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEISSLL 61 (321)
T ss_pred EEEEeCcCceECCc---------------cccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHHHHHc
Confidence 48999999999762 346889999999987 4 66766665 56666644443 443
No 239
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.65 E-value=1.1 Score=44.84 Aligned_cols=72 Identities=21% Similarity=0.281 Sum_probs=40.3
Q ss_pred CeEEEEecCCccCCCCC-----CCCCC-Ccc-----ccccccCCChhHHHHHHHhhcCCCCcEEEEcCCC-hhhHHHhhc
Q 003145 591 NRLLILGFNATLTEPVD-----TPGRR-GDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQ 658 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~-----~p~~~-~~~-----~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~-~~~l~~~~~ 658 (844)
.||++||+|+||-+..- .|-.. ... .....-.+-+.+..+|+.|.. .|+.++++|--+ .+...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 58999999999998632 11000 000 112334567889999999998 699999999654 456677777
Q ss_pred ccCce
Q 003145 659 EYNLW 663 (844)
Q Consensus 659 ~l~l~ 663 (844)
.+++.
T Consensus 82 ~l~i~ 86 (169)
T PF12689_consen 82 LLEID 86 (169)
T ss_dssp HTT-C
T ss_pred hcCCC
Confidence 76554
No 240
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=84.83 E-value=6.6 Score=42.59 Aligned_cols=97 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
.+++++..|-.|+.+.....++|+..+ .+++ .+..|.++.. +.++ +++++++. +. .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~----~i~vv~G~~~---~~~~----~l~~~~~~-~~--------~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINI----SITLVTGSSN---PNLD----ELKKFAKE-YP--------NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCc----eEEEEECCCC---cCHH----HHHHHHHh-CC--------CE
Confidence 357999999999988777778887653 2222 2333443332 2222 33333332 11 23
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 493 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS 493 (844)
.. .+ ..+++..++..||+++.+ -|.++.|+++++ .|.|+-
T Consensus 227 ~~-~~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i 266 (279)
T TIGR03590 227 IL-FI--DVENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAI 266 (279)
T ss_pred EE-Ee--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEE
Confidence 32 33 336899999999999884 458999999996 455543
No 241
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=84.46 E-value=1.4 Score=45.62 Aligned_cols=59 Identities=19% Similarity=0.153 Sum_probs=41.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCCcchhh-----hcCCHHHHHHHHHHHh
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSINSLSKE-----KKRKVHQLFGIFLRFS 838 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~~~a~~-----~l~~~~~v~~~l~~~~ 838 (844)
.|...++.+ +..+ ..++++|| +.|| |++ +.+|++.-... +.+. ...++.++.+.|...+
T Consensus 132 ~K~~~l~~l-~~~~---------~~~v~vGD-s~nDl~ml~~Ag~~ia~~ak~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (203)
T TIGR02137 132 PKRQSVIAF-KSLY---------YRVIAAGD-SYNDTTMLSEAHAGILFHAPEN-VIREFPQFPAVHTYEDLKREFLKAS 199 (203)
T ss_pred hHHHHHHHH-HhhC---------CCEEEEeC-CHHHHHHHHhCCCCEEecCCHH-HHHhCCCCCcccCHHHHHHHHHHHH
Confidence 488877776 4433 26899999 9999 887 88999877533 3332 3677888877776553
No 242
>PLN02940 riboflavin kinase
Probab=84.46 E-value=1.5 Score=50.00 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 658 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~ 658 (844)
.+-+.+.+.|+.|.+ .|.+++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 355678889999987 599999999999988877665
No 243
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=83.95 E-value=1.1 Score=45.24 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccc-cccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIRE-MELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~-~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
.++||+|-||||..+.+. ++++ .+-...+.++++|.+|.+ .|..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccCcHHHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 689999999999876321 2221 345677889999999987 69999999864
No 244
>PRK14986 glycogen phosphorylase; Provisional
Probab=83.82 E-value=27 Score=43.31 Aligned_cols=150 Identities=11% Similarity=0.125 Sum_probs=102.0
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHH--HhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++++-|+..-|-... +|...+++. ..+|+.. ..+++|..|....++.. -+++-+.|.+++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYM-AKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhccChhhcC
Confidence 4567888999998888777 777766653 3566421 24677767765555533 34566778888887775322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvn 510 (844)
...|+|+. ..+-+--..++.+|||-..+|+ .|.=|..-+=||.- |++-+|..-|+-.++ +++++++-
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 34588755 4455555678999999999998 57777777777764 889999999977655 46788885
Q ss_pred CCCHHHHHH
Q 003145 511 PWNITEVAN 519 (844)
Q Consensus 511 P~d~~~~A~ 519 (844)
.+.+++++
T Consensus 695 -~~~~ev~~ 702 (815)
T PRK14986 695 -NTAEEVEA 702 (815)
T ss_pred -CCHHHHHH
Confidence 45666554
No 245
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=83.47 E-value=4 Score=43.84 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=49.7
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
....+|+||+|.||+.+... ...+.|.+.+.|.+|.+ .|..+++=|--+.+-+...+..+++
T Consensus 120 ~~phVIVfDlD~TLItd~~~-----------v~Ir~~~v~~sL~~Lk~-~g~vLvLWSyG~~eHV~~sl~~~~L 181 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD-----------VRIRDPAVYDSLRELKE-QGCVLVLWSYGNREHVRHSLKELKL 181 (297)
T ss_pred CCCcEEEEECCCcccccCCc-----------cccCChHHHHHHHHHHH-cCCEEEEecCCCHHHHHHHHHHhCC
Confidence 34569999999999987531 23457899999999998 5888998888888888888887754
No 246
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=83.07 E-value=2.1 Score=42.45 Aligned_cols=69 Identities=14% Similarity=0.208 Sum_probs=47.7
Q ss_pred CeEEEEecCCccCCCCCCCCCC-Cc---cc------cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 591 NRLLILGFNATLTEPVDTPGRR-GD---QI------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~-~~---~~------~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
++.+++|+|+||+-....|... .+ ++ ...-...-|.+.+.|.+|.+ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 4679999999999765544210 00 00 01112345678999999986 4899999999999888888876
Q ss_pred C
Q 003145 661 N 661 (844)
Q Consensus 661 ~ 661 (844)
+
T Consensus 79 d 79 (162)
T TIGR02251 79 D 79 (162)
T ss_pred C
Confidence 3
No 247
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=82.81 E-value=6.7 Score=50.13 Aligned_cols=41 Identities=10% Similarity=0.233 Sum_probs=35.6
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.++-+++.+++++|.+ .|++|+++||..........+++++
T Consensus 578 Dplr~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~iA~~~GI 618 (941)
T TIGR01517 578 DPLRPGVREAVQECQR-AGITVRMVTGDNIDTAKAIARNCGI 618 (941)
T ss_pred CCCchhHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCC
Confidence 3577899999999987 5999999999999999988887553
No 248
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=82.21 E-value=2.5 Score=43.41 Aligned_cols=62 Identities=21% Similarity=0.292 Sum_probs=45.9
Q ss_pred cCCeEEEEecCCccCCCCC-CCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 589 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
..+|++++|+|+||+.... .+ . .....-|-+.+-|+.+.+ ...|+|-|..+...++..+..+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~-----~---~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAE-----T---GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCcEEEEeCCCceEcccccCC-----C---ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHHh
Confidence 4678999999999996521 11 0 112234678999999886 7999999999988888777654
No 249
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=81.15 E-value=59 Score=38.50 Aligned_cols=109 Identities=17% Similarity=0.173 Sum_probs=76.9
Q ss_pred EEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeC
Q 003145 366 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (844)
Q Consensus 366 il~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~ 445 (844)
++|..=-.+.|=.++.+.-.-++|+.-|+- +|++.+.| + ..+....+++++++- |. +...++| .
T Consensus 431 vVf~c~~n~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~---~~~~~~~l~~la~~~----Gv-~~eRL~f-~ 494 (620)
T COG3914 431 VVFCCFNNYFKITPEVFALWMQILSAVPNS----VLLLKAGG---D---DAEINARLRDLAERE----GV-DSERLRF-L 494 (620)
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHhCCCc----EEEEecCC---C---cHHHHHHHHHHHHHc----CC-Chhheee-c
Confidence 333333347888999999999999999974 36656543 1 124456666666653 32 2334554 7
Q ss_pred CCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCC
Q 003145 446 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 496 (844)
Q Consensus 446 ~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~ 496 (844)
+..+.++-.+-|+.||+++-|=-+-| ..++.|++.. |++|++-.+
T Consensus 495 p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 495 PPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred CCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 78888899999999999998877766 5779999998 677777543
No 250
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=81.11 E-value=18 Score=46.89 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=56.4
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCC-----CCCCCC-Ccccc-----ccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPV-----DTPGRR-GDQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~-----~~p~~~-~~~~~-----~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
+..+..+.|.+...|.|++-|= .|-... +.++.. .+.+. ....++.+++.+++++|.+ .|++|+++|
T Consensus 602 ~~~~~~~~~a~~G~RVLalA~k-~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~-agi~v~miT 679 (1054)
T TIGR01657 602 DYQEVLKSYTREGYRVLALAYK-ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR-ASIRTVMIT 679 (1054)
T ss_pred hHHHHHHHHHhcCCEEEEEEEe-ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH-CCCeEEEEC
Confidence 5667778888888898888651 111100 000000 00000 1234688899999999987 699999999
Q ss_pred CCChhhHHHhhcccCceEEeecc
Q 003145 647 GSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 647 GR~~~~l~~~~~~l~l~liaenG 669 (844)
|..........++++ ++..++
T Consensus 680 GD~~~TA~~iA~~~g--ii~~~~ 700 (1054)
T TIGR01657 680 GDNPLTAVHVARECG--IVNPSN 700 (1054)
T ss_pred CCCHHHHHHHHHHcC--CCCCCc
Confidence 999999988888754 444443
No 251
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=81.05 E-value=1.4e+02 Score=36.15 Aligned_cols=66 Identities=21% Similarity=0.236 Sum_probs=43.2
Q ss_pred HHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe-------------------CCCCchhhc-cCCeE--EE--
Q 003145 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-------------------EFAGAAQSL-GAGAI--LV-- 509 (844)
Q Consensus 454 ~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS-------------------e~~G~~~~l-g~~g~--lv-- 509 (844)
..++++||+++.+| |.+.+|++.++ .|.|+. .+.|....+ |..-+ ++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999998 79999999996 555543 233333333 22111 22
Q ss_pred -CCCCHHHHHHHHHHHhcCCH
Q 003145 510 -NPWNITEVANAIARALNMSP 529 (844)
Q Consensus 510 -nP~d~~~~A~ai~~aL~m~~ 529 (844)
+-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 345688899886 7776543
No 252
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=80.86 E-value=1.6 Score=44.24 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=22.8
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
+.+.+.|+.|.+ .|..++|+||.....++.+++.++
T Consensus 83 ~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g 118 (201)
T TIGR01491 83 DYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLN 118 (201)
T ss_pred ccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhC
Confidence 446666666665 366777777776666666665544
No 253
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=80.44 E-value=1.1e+02 Score=34.70 Aligned_cols=136 Identities=17% Similarity=0.218 Sum_probs=83.6
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003145 363 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (844)
Q Consensus 363 ~~vil~VdRld~~-KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv 441 (844)
+.+++..=|-.-. +++...+.|+.++++++|+.. ++ .|.-.. +..++ .+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~e-------~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVRE-------LV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhhH-------HH---HHHhCCC--CcE
Confidence 3455556676655 999999999999999998753 22 232111 22222 21 1122221 124
Q ss_pred EEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCce-EEEeCCCCchhhccC-CeEEECCCCHHHHHH
Q 003145 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGA-GAILVNPWNITEVAN 519 (844)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~-lVlSe~~G~~~~lg~-~g~lvnP~d~~~~A~ 519 (844)
+ +..++...+...|...|-+.+--| |=.--||-.-+ .| +++=+.+-=.+.+.. +-++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 4 567899999999999996655444 23356887764 33 344444444444422 345665 58899999
Q ss_pred HHHHHhcCCH
Q 003145 520 AIARALNMSP 529 (844)
Q Consensus 520 ai~~aL~m~~ 529 (844)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998754
No 254
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=80.31 E-value=0.98 Score=45.43 Aligned_cols=32 Identities=3% Similarity=-0.143 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
-+-..+.+++++++ .+++.+++||| ...|+-.
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~a 174 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQA 174 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHH
Confidence 35567889999988 67899999999 8888554
No 255
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=80.06 E-value=2.6 Score=43.04 Aligned_cols=13 Identities=15% Similarity=0.383 Sum_probs=11.8
Q ss_pred eEEEEecCCccCC
Q 003145 592 RLLILGFNATLTE 604 (844)
Q Consensus 592 rLi~lD~DGTL~~ 604 (844)
++++||+||||+.
T Consensus 2 ~~v~FD~DGTL~~ 14 (205)
T PRK13582 2 EIVCLDLEGVLVP 14 (205)
T ss_pred eEEEEeCCCCChh
Confidence 7899999999993
No 256
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=80.02 E-value=1.2 Score=44.20 Aligned_cols=35 Identities=14% Similarity=0.184 Sum_probs=17.9
Q ss_pred hhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 625 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 625 ~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.+.+.|+.+.+ .|..++|+||.....++.++..+
T Consensus 76 ~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 76 PGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred cCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHc
Confidence 344555555544 35555555555555555555443
No 257
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=79.32 E-value=12 Score=44.71 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhH
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l 653 (844)
++.+.++-.|+-|.+ .|++||..||--.+..
T Consensus 658 kLQ~dVk~tLElLRN-AgikiWMLTGDKlETA 688 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRN-AGIKIWMLTGDKLETA 688 (1051)
T ss_pred HHhhhhHhHHHHHhh-cCcEEEEEcCcchhhe
Confidence 456778888988886 6999999999877665
No 258
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=78.79 E-value=4.3 Score=42.88 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=29.0
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV 803 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD 803 (844)
|.+.-||..++++++.... ...+.+.|+++|| +.||
T Consensus 146 ~~NmCK~~il~~~~~~~~~---~g~~~~rviYiGD-G~nD 181 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQ---RGVPYDRVIYIGD-GRND 181 (234)
T ss_pred CCccchHHHHHHHHHHHhh---cCCCcceEEEECC-CCCC
Confidence 6788999999999987410 0146899999999 9999
No 259
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=78.19 E-value=1e+02 Score=37.87 Aligned_cols=149 Identities=15% Similarity=0.136 Sum_probs=87.4
Q ss_pred CCcEEEEEecccccCCHHHH-H---HHHHHHHHhCcCCCC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQK-L---LAFEKFLEENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~-l---~Af~~ll~~~P~~~~-~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (844)
+.-+++++-|+..-|-.... | .-+.+++ +.|+... .+++|..|....++.. -+++-+.+.+++..||..-...
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~rik-~~p~~~~~Pv~~IFaGKAhP~d~~-gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRIK-NNPNKKIRPVQFIFAGKAHPGDYM-GKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHHH-HSTTSCCS-EEEEEE----TT-HH-HHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHHH-hcccCCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHHhcChhhc
Confidence 45677899999999976663 3 3445543 4565322 3667666554434422 2456667777777777532112
Q ss_pred CcccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c-CCeEEE
Q 003145 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILV 509 (844)
Q Consensus 437 ~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g-~~g~lv 509 (844)
+...|+|+. ..+-.--..++.+|||-+.+|+ .|.-|..-+=||.- |.+.+|..-|+.-++ | ++.+++
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N-----GaL~lstlDG~niEi~e~vG~eN~fiF 594 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN-----GALNLSTLDGWNIEIAEAVGEENIFIF 594 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT-----T-EEEEESSTCHHHHHHHH-GGGSEEE
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC-----CCeEEecccchhHHHHHhcCCCcEEEc
Confidence 223577754 4566666778999999999998 48888888888885 899999999986554 5 467777
Q ss_pred CCCCHHHHHH
Q 003145 510 NPWNITEVAN 519 (844)
Q Consensus 510 nP~d~~~~A~ 519 (844)
- .+.+++.+
T Consensus 595 G-~~~~ev~~ 603 (713)
T PF00343_consen 595 G-LTAEEVEE 603 (713)
T ss_dssp S--BHHHHHH
T ss_pred C-CCHHHHHH
Confidence 3 45555544
No 260
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=78.07 E-value=1.2e+02 Score=33.97 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=25.6
Q ss_pred CCCCEEEEeCccch--hHHHHHHhcCCCCeEEEEE
Q 003145 230 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFL 262 (844)
Q Consensus 230 ~~~DiVwvHDyhl~--llp~~lr~~~~~~~i~~fl 262 (844)
+++|++..=||.=+ .+.+.+|+..|++|+.++.
T Consensus 75 ~~pd~~i~iD~p~Fnl~lak~~k~~~~~i~viyyi 109 (347)
T PRK14089 75 KQADKVLLMDSSSFNIPLAKKIKKAYPKKEIIYYI 109 (347)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEE
Confidence 56788888776632 4788999999999998875
No 261
>PRK11587 putative phosphatase; Provisional
Probab=78.03 E-value=1.2 Score=46.19 Aligned_cols=55 Identities=13% Similarity=-0.008 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCCCC----cchhhhcCCHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSSIN----SLSKEKKRKVHQL 830 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna~~----~~a~~~l~~~~~v 830 (844)
+.......++.+| .+++++++||| +..|+-. |+ +|.+.+... ..+.+.+++..++
T Consensus 140 ~p~~~~~~~~~~g------~~p~~~l~igD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLG------LAPQECVVVED-APAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcC------CCcccEEEEec-chhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhe
Confidence 3566777788888 67899999999 8888433 43 455654321 1233445555543
No 262
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=78.02 E-value=2 Score=43.74 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.6
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChh
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~ 651 (844)
.+|-+...++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4677789999999997 57788888888754
No 263
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=77.79 E-value=9.1 Score=41.46 Aligned_cols=42 Identities=14% Similarity=0.279 Sum_probs=35.2
Q ss_pred ccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 620 ~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
...+.|...+.|..|.+ .|..++|+||-....++..++.+++
T Consensus 119 ~l~l~pG~~efl~~L~~-~GIpv~IvS~G~~~~Ie~vL~~lgl 160 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQ-HSIPVFIFSAGIGNVLEEVLRQAGV 160 (277)
T ss_pred CCccCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHHHcCC
Confidence 35677788899999987 4999999999999999999887643
No 264
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=77.60 E-value=3.7 Score=42.35 Aligned_cols=13 Identities=15% Similarity=0.307 Sum_probs=10.4
Q ss_pred eEEEEecCCccCC
Q 003145 592 RLLILGFNATLTE 604 (844)
Q Consensus 592 rLi~lD~DGTL~~ 604 (844)
+|.+||+||||++
T Consensus 2 ~la~FDlD~TLi~ 14 (203)
T TIGR02137 2 EIACLDLEGVLVP 14 (203)
T ss_pred eEEEEeCCcccHH
Confidence 5788888888884
No 265
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=77.06 E-value=0.18 Score=61.35 Aligned_cols=228 Identities=14% Similarity=0.090 Sum_probs=119.3
Q ss_pred CccHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhh---
Q 003145 576 SLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV--- 652 (844)
Q Consensus 576 ~l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~--- 652 (844)
.++..++....-.-+.-|.++|+||||-....+| ..+.++-.++.+-.+..+ ...-.++|||.+..
T Consensus 174 pfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~ 242 (732)
T KOG1050|consen 174 PFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVK 242 (732)
T ss_pred CCChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeee
Confidence 3345555555555566688999999999988776 245555555555556554 23355699998665
Q ss_pred -------HHHhhcccCceEEeecceEEEec--CCeeeeccc-cc-----CChHHHHHHHHHHHHHHhcCC----------
Q 003145 653 -------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTMP-EH-----LNMEWVDSLKHVFEYFTERTP---------- 707 (844)
Q Consensus 653 -------l~~~~~~l~l~liaenG~~i~~~--~~~w~~~~~-~~-----~~~~w~~~v~~i~~~~~~rt~---------- 707 (844)
+....+..++..++++|..++.. ++.- +.. +. -...+.....+.++.|.+-.+
T Consensus 243 ~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~kl--ilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~ 320 (732)
T KOG1050|consen 243 ALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKL--ILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENP 320 (732)
T ss_pred ecccccchHHhhccccchhHHHHHHHHhhhccCCce--EecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecC
Confidence 66666666888999999988742 2211 110 11 112344445555555433211
Q ss_pred ----CceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCCCCC-CCeEEEEcCcEEEEEe-CCCCHHHHHHHHHHHhc
Q 003145 708 ----RSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIV 781 (844)
Q Consensus 708 ----gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~~~~-~~~~v~~g~~~vEV~p-~gvnKG~al~~Ll~~l~ 781 (844)
|.-+++-..++..||+..+..|+...+ +.+ ..+... ...+...+....|++| ..+.||.++..+...++
T Consensus 321 ~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~----~pV-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~ 395 (732)
T KOG1050|consen 321 KRTDGKEVEELKFCVSVHVRRINEKFGSASY----QPV-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILC 395 (732)
T ss_pred CcccchHHHHHHHHhHhhhhhhhhccCCccc----ceE-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHh
Confidence 111111122222333322222221110 000 000000 0122334446789998 57999999999988777
Q ss_pred ccCcCCCCCceEEEEee-CCCchhhc--------cCcEEEeCCCCcchhh
Q 003145 782 HSKKMKTAIDYVLCIGH-FLGKVLLT--------QFLIQVGSSINSLSKE 822 (844)
Q Consensus 782 ~~~~~~~~~d~vlaiGD-~~~nDMf~--------g~~Iavgna~~~~a~~ 822 (844)
... -+.+.=...++|| ..++|-+. +++++|+.+......+
T Consensus 396 ~~~-~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e 444 (732)
T KOG1050|consen 396 QEN-KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEE 444 (732)
T ss_pred hcc-cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHH
Confidence 321 0012224578999 23334221 5677777765443333
No 266
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=76.20 E-value=9.6 Score=49.35 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=34.6
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG 669 (844)
+-+.+.+++++|.+ .|++|+++||-............ +++..+.
T Consensus 632 lq~~v~etI~~L~~-AGIkv~mlTGD~~~TA~~IA~~~--~ii~~~~ 675 (1057)
T TIGR01652 632 LQEGVPETIELLRQ-AGIKIWVLTGDKVETAINIGYSC--RLLSRNM 675 (1057)
T ss_pred hhhccHHHHHHHHH-CCCeEEEEcCCcHHHHHHHHHHh--CCCCCCC
Confidence 56788999999987 69999999999999988777654 3444443
No 267
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=75.85 E-value=14 Score=47.42 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=31.5
Q ss_pred cCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc
Q 003145 756 GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT 806 (844)
Q Consensus 756 g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~ 806 (844)
.+-++-+|..-.-|+..++.+.+.. .--++|||| +-|| |.+
T Consensus 769 C~sViCCR~sPlQKA~Vv~lVk~~~---------~~~TLAIGD-GANDVsMIQ 811 (1151)
T KOG0206|consen 769 CKSVICCRVSPLQKALVVKLVKKGL---------KAVTLAIGD-GANDVSMIQ 811 (1151)
T ss_pred cCEEEEccCCHHHHHHHHHHHHhcC---------CceEEEeeC-CCccchhee
Confidence 3455667766778999999884433 356899999 9999 998
No 268
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=75.57 E-value=1.7 Score=47.46 Aligned_cols=56 Identities=7% Similarity=-0.115 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cCc-EEEeCC--C-Cc--chhhhcCCHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QFL-IQVGSS--I-NS--LSKEKKRKVHQLF 831 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~~-Iavgna--~-~~--~a~~~l~~~~~v~ 831 (844)
+...+..++++++ .+++.+++||| +.+|+-. |+. |.+... . +. .+.+.++++.++-
T Consensus 204 ~p~~~~~a~~~~~------~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETLG------VDPSRCVVVED-SVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHhC------cChHHEEEEeC-CHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcc
Confidence 3567888899988 67899999999 8889544 433 334222 1 12 2455567776654
No 269
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=75.40 E-value=4 Score=41.39 Aligned_cols=44 Identities=16% Similarity=0.291 Sum_probs=37.6
Q ss_pred ccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceE
Q 003145 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWL 664 (844)
Q Consensus 620 ~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~l 664 (844)
..+++|.+++....|.+ .|.+|+++||-=+..+.....++++..
T Consensus 86 k~~lT~Gi~eLv~~L~~-~~~~v~liSGGF~~~i~~Va~~Lgi~~ 129 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHA-RGTQVYLISGGFRQLIEPVAEQLGIPK 129 (227)
T ss_pred CCccCCCHHHHHHHHHH-cCCeEEEEcCChHHHHHHHHHHhCCcH
Confidence 45678899999999998 599999999999999988888876644
No 270
>PRK11590 hypothetical protein; Provisional
Probab=75.21 E-value=1.6 Score=45.26 Aligned_cols=41 Identities=22% Similarity=0.167 Sum_probs=28.1
Q ss_pred CCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCC
Q 003145 765 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSS 815 (844)
Q Consensus 765 ~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna 815 (844)
.|-.|-..++..+ + .+.+...|-|| +.+| |++ +..++|...
T Consensus 160 ~g~~K~~~l~~~~---~------~~~~~~~aY~D-s~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 160 LGHEKVAQLERKI---G------TPLRLYSGYSD-SKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CChHHHHHHHHHh---C------CCcceEEEecC-CcccHHHHHhCCCCEEECcc
Confidence 3445555555443 4 24567789999 8899 888 888888764
No 271
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=75.21 E-value=1.6 Score=46.37 Aligned_cols=67 Identities=6% Similarity=0.053 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEe--CCCC----cchhhhcCCHHH--HHHHH
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVG--SSIN----SLSKEKKRKVHQ--LFGIF 834 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavg--na~~----~~a~~~l~~~~~--v~~~l 834 (844)
-+...+.+++++++ .+++.+++||| +..|+.. |+ .|.+. +..+ ..+.+.++++.+ +...|
T Consensus 165 P~p~~~~~a~~~~~------~~~~~~l~vgD-s~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~~~~~ 237 (248)
T PLN02770 165 PHPDPYLKALEVLK------VSKDHTFVFED-SVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKLWAAL 237 (248)
T ss_pred CChHHHHHHHHHhC------CChhHEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHHHHHH
Confidence 34567888889988 67899999999 8889554 33 33343 2211 234566888887 44445
Q ss_pred HHHhhcc
Q 003145 835 LRFSYSG 841 (844)
Q Consensus 835 ~~~~~~~ 841 (844)
..+.+.|
T Consensus 238 ~~~~~~~ 244 (248)
T PLN02770 238 EELDQKG 244 (248)
T ss_pred hhccccc
Confidence 5444443
No 272
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=74.98 E-value=1.8 Score=44.12 Aligned_cols=30 Identities=13% Similarity=-0.004 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-chhhc
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KVLLT 806 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nDMf~ 806 (844)
.....+++++++ .+++.+++||| +. +|+..
T Consensus 163 ~~~~~~~~~~~~------~~~~~~~~IgD-~~~~Di~~ 193 (203)
T TIGR02252 163 PKIFQEALERAG------ISPEEALHIGD-SLRNDYQG 193 (203)
T ss_pred HHHHHHHHHHcC------CChhHEEEECC-CchHHHHH
Confidence 456888899988 67899999999 75 78544
No 273
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=74.43 E-value=84 Score=39.14 Aligned_cols=150 Identities=12% Similarity=0.121 Sum_probs=101.1
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHH--HhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++.+-|+..-|-... +|.-+.++. ..+|+.. ..+++|..|....++.. -+++-+.|..++..||..=...+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYM-AKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHH-HHHHHHHHHHHHHHhccChhcCC
Confidence 5678888999999888777 666655543 3456421 23667766665555433 34566778888888886322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g-~~g~lvn 510 (844)
...|+|+. ..+-.--..++.+|||-...|+ .|.=|..-+=||.- |.+.+|..-|+--++ | ++++++-
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhc-----CceeeecccchhHHHHHHhCcCcEEEeC
Confidence 44588755 3455555678999999999998 47777777777764 889999999987665 3 5788884
Q ss_pred CCCHHHHHH
Q 003145 511 PWNITEVAN 519 (844)
Q Consensus 511 P~d~~~~A~ 519 (844)
.+.+++.+
T Consensus 682 -~~~~ev~~ 689 (797)
T cd04300 682 -LTAEEVEA 689 (797)
T ss_pred -CCHHHHHH
Confidence 45666554
No 274
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=73.84 E-value=10 Score=48.05 Aligned_cols=41 Identities=24% Similarity=0.215 Sum_probs=36.3
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
-.|-+++.+++++|.+ .|++|+++||-.........+++++
T Consensus 549 Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 549 DPPKETTAPALKALKA-SGVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred CcchhhHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3467899999999987 5999999999999999999988765
No 275
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.19 E-value=1.6 Score=44.49 Aligned_cols=30 Identities=3% Similarity=-0.065 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhh
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLL 805 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf 805 (844)
+-..+..+++.++ .+++.+++||| +.+|+.
T Consensus 163 ~p~~~~~~~~~~~------~~~~~~i~vGD-~~~Di~ 192 (197)
T TIGR01548 163 NPEPLILAAKALG------VEACHAAMVGD-TVDDII 192 (197)
T ss_pred CHHHHHHHHHHhC------cCcccEEEEeC-CHHHHH
Confidence 4556777888888 67889999999 878854
No 276
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=72.85 E-value=1.9 Score=43.00 Aligned_cols=31 Identities=0% Similarity=-0.201 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
+...+.+++++++ .+++.+++||| +..|+-.
T Consensus 144 ~~~~~~~~~~~~~------~~~~~~v~IgD-~~~di~a 174 (185)
T TIGR02009 144 HPETFLLAAELLG------VSPNECVVFED-ALAGVQA 174 (185)
T ss_pred ChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHH
Confidence 3456778888888 67899999999 7778443
No 277
>PHA02597 30.2 hypothetical protein; Provisional
Probab=72.21 E-value=1.9 Score=43.91 Aligned_cols=54 Identities=7% Similarity=-0.031 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc--cC--cE---EEeCCC-Cc--chhhhcCCHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT--QF--LI---QVGSSI-NS--LSKEKKRKVHQLF 831 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~--g~--~I---avgna~-~~--~a~~~l~~~~~v~ 831 (844)
|-..+..+++.++ ++.+++||| ..+|+.. .. || .+..+. +. ...+++.+.+|+.
T Consensus 132 kp~~~~~a~~~~~--------~~~~v~vgD-s~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKYG--------DRVVCFVDD-LAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHhC--------CCcEEEeCC-CHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHh
Confidence 5678888888875 578999999 8888544 22 33 343322 11 3447777777765
No 278
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=71.98 E-value=10 Score=38.08 Aligned_cols=49 Identities=20% Similarity=0.085 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHhhCC---CCCEEEEeCccchhHHHHHHhcCCCCeEEEE
Q 003145 211 FAAYIKANQMFADVVNKHYK---DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWF 261 (844)
Q Consensus 211 ~~~Y~~vN~~fa~~i~~~~~---~~DiVwvHDyhl~llp~~lr~~~~~~~i~~f 261 (844)
|+.=...-+..++.+.++-+ .+|+|..| +-+.-+-+||+..|+++++-+
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H--~GWGe~Lflkdv~P~a~li~Y 94 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVPDVIIAH--PGWGETLFLKDVFPDAPLIGY 94 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEc--CCcchhhhHHHhCCCCcEEEE
Confidence 44444444555555555444 45999999 888888899999999997643
No 279
>PLN02954 phosphoserine phosphatase
Probab=71.42 E-value=5.7 Score=41.15 Aligned_cols=15 Identities=7% Similarity=0.127 Sum_probs=9.1
Q ss_pred CeEEEEecCCccCCC
Q 003145 591 NRLLILGFNATLTEP 605 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~ 605 (844)
.|+|+||+||||++.
T Consensus 12 ~k~viFDfDGTL~~~ 26 (224)
T PLN02954 12 ADAVCFDVDSTVCVD 26 (224)
T ss_pred CCEEEEeCCCcccch
Confidence 456666666666654
No 280
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=71.09 E-value=13 Score=47.29 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=33.9
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
|-++++++++.|.+ .|++|+++||-.........++++
T Consensus 548 pr~~v~~aI~~l~~-AGI~v~MiTGD~~~TA~aIa~~~G 585 (917)
T COG0474 548 PREDVKEAIEELRE-AGIKVWMITGDHVETAIAIAKECG 585 (917)
T ss_pred CCccHHHHHHHHHH-CCCcEEEECCCCHHHHHHHHHHcC
Confidence 56889999999987 699999999999999998888865
No 281
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=70.93 E-value=2.3 Score=45.17 Aligned_cols=31 Identities=6% Similarity=-0.093 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhcccCcCCC-CCceEEEEeeCCCchhhc
Q 003145 769 KGAAIDRILAEIVHSKKMKT-AIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~-~~d~vlaiGD~~~nDMf~ 806 (844)
+-..+...+++++ . +++.+++||| +.+||..
T Consensus 158 ~p~~~~~a~~~l~------~~~~~~~l~IGD-s~~Di~a 189 (253)
T TIGR01422 158 APWMALKNAIELG------VYDVAACVKVGD-TVPDIEE 189 (253)
T ss_pred CHHHHHHHHHHcC------CCCchheEEECC-cHHHHHH
Confidence 3456778888887 5 3789999999 8899655
No 282
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=70.23 E-value=4.5 Score=41.14 Aligned_cols=44 Identities=23% Similarity=0.150 Sum_probs=36.0
Q ss_pred eCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeC
Q 003145 764 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGS 814 (844)
Q Consensus 764 p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgn 814 (844)
..+-.|..+++.++++.+ ++++.++++|| +.+| |++ +.+++|..
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCCcEEeCC
Confidence 346679999999999887 67889999999 8899 777 77777765
No 283
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=70.15 E-value=1.1e+02 Score=37.62 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=92.8
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHHHhCc-CCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENS-DWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P-~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
+..+++++=|+..-|-....+.=..++...-- ++..++.++..|....++.. -.++-..+...+..||.+ ..
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~-aK~iIk~I~~~a~~in~~------lk 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYA-AKEIIKLINDVADVINNK------LK 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchH-HHHHHHHHHHHHHhhccc------ce
Confidence 46688889999988876666655544443322 45556777766655444432 245667788888888763 25
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcCCC--cCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEECC
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNP 511 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S~~--EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvnP 511 (844)
|+|+.. .+-.--..++.+|||-..+|++ |.=|..-+=|+.- |.+-+|..-|+--++ |.+|+++-.
T Consensus 559 VvFl~n-YdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alN-----GaltigtlDGanvEi~e~vg~~N~~~fG~ 630 (750)
T COG0058 559 VVFLPN-YDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALN-----GALTLGTLDGANVEIYEHVGGENGWIFGE 630 (750)
T ss_pred EEEeCC-CChhHHHhhcccccccccCCCCCccccCcCcchHHhc-----CCceeeccccHHHHHHHhcCCCceEEeCC
Confidence 777654 3444445678999999999984 6666666666554 889999999988665 468888853
No 284
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=70.13 E-value=4.6 Score=41.68 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-chhhc
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KVLLT 806 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nDMf~ 806 (844)
+......++++++ .+++.+++||| +. +|+-.
T Consensus 152 ~~~~~~~~~~~~~------~~~~~~~~igD-s~~~di~~ 183 (221)
T TIGR02253 152 HPKIFYAALKRLG------VKPEEAVMVGD-RLDKDIKG 183 (221)
T ss_pred CHHHHHHHHHHcC------CChhhEEEECC-ChHHHHHH
Confidence 4467888899988 67899999999 86 79544
No 285
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=70.02 E-value=63 Score=40.09 Aligned_cols=150 Identities=14% Similarity=0.098 Sum_probs=99.5
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHH--HhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++++-|+..-|-... +|....++. .++|+.. ..+++|..|....++.. -+.+-+.|..++..||..=...+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL-AKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHH-HHHHHHHHHHHHHHhcCChhhCC
Confidence 4557778999998887766 666655553 3456522 23667766665545432 34566678888888875322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvn 510 (844)
...|+|+. ..+-.--..++.+|||-...|+ .|.=|..-+=||.- |++-+|..-|+--++ +++++++-
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN-----GaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc-----CceeeecccchHHHHHHHhCcCcEEEeC
Confidence 34588754 4455555678999999999998 47777777777764 899999999986544 36788885
Q ss_pred CCCHHHHHH
Q 003145 511 PWNITEVAN 519 (844)
Q Consensus 511 P~d~~~~A~ 519 (844)
. +.+++.+
T Consensus 681 ~-~~~ev~~ 688 (798)
T PRK14985 681 H-TVEQVKA 688 (798)
T ss_pred C-CHHHHHH
Confidence 4 5555544
No 286
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=69.84 E-value=2.7 Score=44.34 Aligned_cols=58 Identities=9% Similarity=0.048 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCC-Cchhhc----cC-cEEEeCCCC---------cchhhhcCCHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKVLLT----QF-LIQVGSSIN---------SLSKEKKRKVHQLFGI 833 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~-~nDMf~----g~-~Iavgna~~---------~~a~~~l~~~~~v~~~ 833 (844)
+......++++++ .+++.+++||| + ..|+.. |+ +|.+..... -.....+++..++..+
T Consensus 165 ~p~~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 165 FSDMYHLAAEKLN------VPIGEILHVGD-DLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred cHHHHHHHHHHcC------CChhHEEEEcC-CcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 4567778888888 67899999999 8 589544 43 333432211 1233456777666654
No 287
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=69.57 E-value=8 Score=38.92 Aligned_cols=61 Identities=13% Similarity=0.243 Sum_probs=41.9
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC----ce--EEeecceEEEecCCeeeecc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LW--LAAENGMFLRCTTGKWMTTM 683 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~--liaenG~~i~~~~~~w~~~~ 683 (844)
.++.|..++..+...+ .+..|+|+||-....+..+|..+. +. =|..|-.+++. ++.|....
T Consensus 72 i~Idp~fKef~e~ike-~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~-dg~h~i~~ 138 (220)
T COG4359 72 IKIDPGFKEFVEWIKE-HDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI-DGQHSIKY 138 (220)
T ss_pred cccCccHHHHHHHHHH-cCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC-CCceeeec
Confidence 4566777777777766 589999999999999998888862 22 23445555553 45666544
No 288
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=67.83 E-value=17 Score=46.99 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=34.9
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+-+++.+++++|.+ .|++|+++||..........+++++
T Consensus 646 p~r~~v~~aI~~l~~-aGIkv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQ-AGINVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCC
Confidence 367899999999987 6999999999999999988887653
No 289
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=67.79 E-value=17 Score=46.15 Aligned_cols=41 Identities=22% Similarity=0.194 Sum_probs=36.2
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
-.|-+++.+++++|.+ .|++|+++||-.........+++++
T Consensus 549 Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 549 DPPKESAAPAIAALRE-NGVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred CccHHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHcCC
Confidence 3577899999999987 5999999999999999999988765
No 290
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=67.69 E-value=6.3 Score=46.64 Aligned_cols=83 Identities=13% Similarity=0.163 Sum_probs=51.9
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCC-ChhHHHHHHHhhcCCCCcEEEEcCCChhhHH---Hhhccc-CceE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEY-NLWL 664 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~---~~~~~l-~l~l 664 (844)
.-|+|+.|+|||++... ..++-++.....= +..+.++-.++.+ .|.+++-+|.|...... .++..+ ..|.
T Consensus 529 n~kIVISDIDGTITKSD----vLGh~lp~iGkDWTh~GVAkLyt~Ik~-NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~ 603 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSD----VLGHVLPMIGKDWTHTGVAKLYTKIKE-NGYKILYLSARAIGQADSTRQYLKNVEQDGK 603 (738)
T ss_pred CCcEEEecCCCceEhhh----hhhhhhhhhcCcchhhhHHHHHHHHHh-CCeeEEEEehhhhhhhHHHHHHHHHHhhcCc
Confidence 46899999999999763 1233333222221 2346666677776 59999999999986553 455544 3455
Q ss_pred EeecceEEEecCC
Q 003145 665 AAENGMFLRCTTG 677 (844)
Q Consensus 665 iaenG~~i~~~~~ 677 (844)
+--+|-.+..+++
T Consensus 604 ~LPdGPViLSPd~ 616 (738)
T KOG2116|consen 604 KLPDGPVILSPDS 616 (738)
T ss_pred cCCCCCEEeCCCc
Confidence 5556655554343
No 291
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=66.68 E-value=84 Score=39.06 Aligned_cols=151 Identities=11% Similarity=0.106 Sum_probs=100.5
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHH--HhCcCCC-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll--~~~P~~~-~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~ 437 (844)
+..+++.+-|+..-|-... +|....++. ..+|+.. ..+++|..|....++.. -+++-+.|..++..||..=...+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM-AKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH-HHHHHHHHHHHHHHhccChhhCC
Confidence 4567788999998887766 666655543 3456431 13567766665555433 34566778888888886322223
Q ss_pred cccEEEeCCCCCHHHHHHHHHhCcEEEEcCC--CcCCChhHhhhhhcccCCCceEEEeCCCCchhhc----c-CCeEEEC
Q 003145 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (844)
Q Consensus 438 ~~pv~~~~~~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l----g-~~g~lvn 510 (844)
...|+|+. ..+-.--..++.+|||-...|+ .|.=|..-+=||.- |.+.+|..-|+--++ | ++++++-
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMK~alN-----GaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLN-----GALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhc-----CcceeecccchhHHHHHHhCcccEEEcC
Confidence 34588755 4455555678999999999998 47777777777764 889999988887665 3 5677774
Q ss_pred CCCHHHHHHH
Q 003145 511 PWNITEVANA 520 (844)
Q Consensus 511 P~d~~~~A~a 520 (844)
.+.+++.+.
T Consensus 679 -~~~~ev~~~ 687 (794)
T TIGR02093 679 -LTVEEVEAL 687 (794)
T ss_pred -CCHHHHHHH
Confidence 466665543
No 292
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=66.46 E-value=3.4 Score=42.77 Aligned_cols=37 Identities=3% Similarity=-0.018 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cCcEE
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QFLIQ 811 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~~Ia 811 (844)
-+......++++++ .+++.+++||| +..|+-. |+.+.
T Consensus 143 P~p~~~~~a~~~~~------~~p~~~l~igD-s~~di~aA~~aG~~~i 183 (221)
T PRK10563 143 PDPALMFHAAEAMN------VNVENCILVDD-SSAGAQSGIAAGMEVF 183 (221)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEeC-cHhhHHHHHHCCCEEE
Confidence 35788889999998 67899999999 8888655 55543
No 293
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=66.35 E-value=4.1 Score=40.65 Aligned_cols=32 Identities=3% Similarity=-0.135 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
-+-.....++++++ .+++.+++||| +.+|+-.
T Consensus 142 p~p~~~~~~~~~~~------~~~~~~v~vgD-~~~di~a 173 (185)
T TIGR01990 142 PDPEIFLAAAEGLG------VSPSECIGIED-AQAGIEA 173 (185)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-CHHHHHH
Confidence 35677788888888 67899999999 8888544
No 294
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=66.10 E-value=3.6 Score=42.42 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHh-cccCcCCCCCceEEEEeeCCC-chhhc----cC-cEEEeC--CC-C--cchhhhcCCHHHHHHHH
Q 003145 769 KGAAIDRILAEI-VHSKKMKTAIDYVLCIGHFLG-KVLLT----QF-LIQVGS--SI-N--SLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 769 KG~al~~Ll~~l-~~~~~~~~~~d~vlaiGD~~~-nDMf~----g~-~Iavgn--a~-~--~~a~~~l~~~~~v~~~l 834 (844)
+......+++++ + .+++.+++||| +. +|+-. |+ +|.+.. .. + ..+.+.+++..++.++|
T Consensus 154 ~~~~~~~~~~~~~~------~~~~~~v~igD-~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 154 DKEIFNYALERMPK------FSKEEVLMIGD-SLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CHHHHHHHHHHhcC------CCchheEEECC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 456678888888 7 67899999999 86 79654 43 233322 11 1 13456788888887654
No 295
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=65.71 E-value=8.8 Score=39.60 Aligned_cols=16 Identities=19% Similarity=0.424 Sum_probs=13.7
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
..++++||+||||++.
T Consensus 5 ~~~~iiFD~DGTL~d~ 20 (226)
T PRK13222 5 DIRAVAFDLDGTLVDS 20 (226)
T ss_pred cCcEEEEcCCcccccC
Confidence 4678999999999976
No 296
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=63.47 E-value=4.2 Score=40.82 Aligned_cols=31 Identities=10% Similarity=0.112 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
+-....+++++++ .+++.+++||| ...|+-.
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~l~vgD-~~~di~a 173 (184)
T TIGR01993 143 SPQAYEKALREAG------VDPERAIFFDD-SARNIAA 173 (184)
T ss_pred CHHHHHHHHHHhC------CCccceEEEeC-CHHHHHH
Confidence 3467788889988 67899999999 7777443
No 297
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=62.71 E-value=7 Score=37.15 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.3
Q ss_pred EEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 594 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 594 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+.++++|++.- .++-+++.+.|++|.+ ...|+|+||-.+.++.+.....+
T Consensus 17 ~~~~v~~tiatg---------------Gklf~ev~e~iqeL~d--~V~i~IASgDr~gsl~~lae~~g 67 (152)
T COG4087 17 KAGKVLYTIATG---------------GKLFSEVSETIQELHD--MVDIYIASGDRKGSLVQLAEFVG 67 (152)
T ss_pred ecceEEEEEccC---------------cEEcHhhHHHHHHHHH--hheEEEecCCcchHHHHHHHHcC
Confidence 356889999875 3466789999999987 49999999999999988877643
No 298
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=62.29 E-value=17 Score=37.78 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=36.4
Q ss_pred EEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch---hhc--cCcEEEeC
Q 003145 761 EVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV---LLT--QFLIQVGS 814 (844)
Q Consensus 761 EV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD---Mf~--g~~Iavgn 814 (844)
..-|++.=||..++++....- ...+..+.++++|| +.|| ++. +-.++|--
T Consensus 156 ~~CPsNmCKg~Vl~~~~~s~~---~~gv~yer~iYvGD-G~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 156 NLCPSNMCKGLVLDELVASQL---KDGVRYERLIYVGD-GANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred CcCchhhhhhHHHHHHHHHHh---hcCCceeeEEEEcC-CCCCcCcchhcccCceeccc
Confidence 347899999999999887652 12256889999999 9999 444 55555543
No 299
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=62.02 E-value=19 Score=38.54 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=26.3
Q ss_pred EeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 763 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 763 ~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
.-.|.+||.++..++.+++ ..|+.|++|-|
T Consensus 157 ft~~~~KG~~L~~fL~~~~------~~pk~IIfIDD 186 (252)
T PF11019_consen 157 FTGGQDKGEVLKYFLDKIN------QSPKKIIFIDD 186 (252)
T ss_pred EeCCCccHHHHHHHHHHcC------CCCCeEEEEeC
Confidence 3467899999999999998 56899999999
No 300
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.48 E-value=25 Score=40.57 Aligned_cols=83 Identities=16% Similarity=0.173 Sum_probs=58.4
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCC-CCCCCCCccc-cccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHH
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPV-DTPGRRGDQI-REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~-~~p~~~~~~~-~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~ 655 (844)
++..++.+-....+|.+++|+|+||..-. .+-|..+=++ +.....+-.+..+-+..|.+ +|..++|+|=-...++.+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~k-qGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKK-QGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHh-ccEEEEEecCCchhhHHH
Confidence 56667777777889999999999998642 1111111111 11122344567888889987 699999999999999999
Q ss_pred hhcccC
Q 003145 656 NFQEYN 661 (844)
Q Consensus 656 ~~~~l~ 661 (844)
.|...+
T Consensus 288 vF~khp 293 (574)
T COG3882 288 VFRKHP 293 (574)
T ss_pred HHhhCC
Confidence 888753
No 301
>PRK09449 dUMP phosphatase; Provisional
Probab=60.24 E-value=4.5 Score=41.88 Aligned_cols=60 Identities=13% Similarity=0.072 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-chhhc----cC-cEEEeC-CC----CcchhhhcCCHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KVLLT----QF-LIQVGS-SI----NSLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nDMf~----g~-~Iavgn-a~----~~~a~~~l~~~~~v~~~l~ 835 (844)
-....+++++++. .+++.+++||| +. +|+-. |+ +|.+.. .. ...+.+.+++..++..+|+
T Consensus 153 p~~~~~~~~~~~~-----~~~~~~~~vgD-~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 153 VAIFDYALEQMGN-----PDRSRVLMVGD-NLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHHHHHHcCC-----CCcccEEEEcC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 4567788888872 24578999999 86 69544 44 344432 11 1235677899999988764
No 302
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=60.11 E-value=9.5 Score=40.32 Aligned_cols=39 Identities=13% Similarity=0.338 Sum_probs=28.0
Q ss_pred CChhHHHHHHHhhc-CCCCcEEEEcCCChhhHHHhhcccC
Q 003145 623 LHPDLKQPLNALCH-DPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 623 ~~~~~~~~L~~L~~-d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
+.|.++++|+.+.+ ..+..++|+|--.--+++.+++..+
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~g 111 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHG 111 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCC
Confidence 55677778877743 2477788888888888888777654
No 303
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=60.05 E-value=43 Score=32.53 Aligned_cols=72 Identities=19% Similarity=0.258 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
.-+++...+++++ ++..|.||.|...++.++. ..+.+++.+.++..+|+ .||++....++-.+-...+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455666666665 3668889999876766655 56678899999999887 489988877776655555554
Q ss_pred Cc
Q 003145 460 TD 461 (844)
Q Consensus 460 AD 461 (844)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 43
No 304
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=58.92 E-value=26 Score=32.84 Aligned_cols=39 Identities=26% Similarity=0.301 Sum_probs=28.3
Q ss_pred HHhhCCCCCEEEEeCccc-hhHHHHHHhcCCCCeEEEEEec
Q 003145 225 VNKHYKDGDVVWCHDYHL-MFLPKCLKEYNSDMKVGWFLHT 264 (844)
Q Consensus 225 i~~~~~~~DiVwvHDyhl-~llp~~lr~~~~~~~i~~flH~ 264 (844)
+.+..+ .|+|++|.... .+++.++++.....|+.++.|-
T Consensus 69 ~ik~~~-~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg 108 (139)
T PF13477_consen 69 IIKKEK-PDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHG 108 (139)
T ss_pred HhccCC-CCEEEEecCChHHHHHHHHHHHcCCCCEEEEecC
Confidence 333334 69999999875 5677777666555899999984
No 305
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=58.20 E-value=10 Score=48.23 Aligned_cols=40 Identities=5% Similarity=0.295 Sum_probs=34.8
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
++-+++.++|++|.+ .|++++++||..........+.+++
T Consensus 537 plr~~v~e~I~~l~~-aGI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 537 PPRPEVADAIEKCRT-AGIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEecCCCHHHHHHHHHHcCC
Confidence 367899999999987 6999999999999999888887654
No 306
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=57.43 E-value=6.1 Score=44.54 Aligned_cols=77 Identities=17% Similarity=0.195 Sum_probs=46.8
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccc--cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEe
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREME--LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAA 666 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~--~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~lia 666 (844)
...+++++|+|||++.... -|+ +..+. ---+..+...-.++.. .|..|.-.|.|++..+...-.- +..|+
T Consensus 373 ~n~kiVVsDiDGTITkSD~-~Gh----v~~miGkdwth~gVAkLYtdI~r-NGYkI~YltsR~~Gqa~sTrsy--lrnie 444 (580)
T COG5083 373 NNKKIVVSDIDGTITKSDA-LGH----VKQMIGKDWTHNGVAKLYTDIDR-NGYKIKYLTSRSYGQADSTRSY--LRNIE 444 (580)
T ss_pred CCCcEEEEecCCcEEehhh-HHH----HHHHhccchhhcchhhhhhhhcc-CceEEEEEecccccchhhhhhH--HHhhh
Confidence 4678999999999997631 110 00000 0112345555566665 4789999999998776543332 44667
Q ss_pred ecceEEE
Q 003145 667 ENGMFLR 673 (844)
Q Consensus 667 enG~~i~ 673 (844)
+||+.+=
T Consensus 445 QngykLp 451 (580)
T COG5083 445 QNGYKLP 451 (580)
T ss_pred hcCccCC
Confidence 7777553
No 307
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=57.14 E-value=4.7 Score=39.02 Aligned_cols=13 Identities=15% Similarity=0.509 Sum_probs=0.0
Q ss_pred EEEEecCCccCCC
Q 003145 593 LLILGFNATLTEP 605 (844)
Q Consensus 593 Li~lD~DGTL~~~ 605 (844)
+|+||+||||++.
T Consensus 1 ~iifD~DGTL~d~ 13 (154)
T TIGR01549 1 AILFDIDGTLVDS 13 (154)
T ss_pred CeEecCCCccccc
No 308
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=56.14 E-value=6.1 Score=40.09 Aligned_cols=31 Identities=16% Similarity=-0.042 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
+......+++.++ .+++.++.||| +.+|+..
T Consensus 150 ~~~~~~~~~~~~~------~~p~~~~~vgD-~~~Di~~ 180 (198)
T TIGR01428 150 APQVYQLALEALG------VPPDEVLFVAS-NPWDLGG 180 (198)
T ss_pred CHHHHHHHHHHhC------CChhhEEEEeC-CHHHHHH
Confidence 3567788889988 67899999999 7788443
No 309
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=54.05 E-value=7 Score=40.08 Aligned_cols=30 Identities=17% Similarity=0.180 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT 806 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~ 806 (844)
......++++++ .+++.+++||| ...|+..
T Consensus 155 p~~~~~~~~~~g------~~~~~~l~i~D-~~~di~a 184 (211)
T TIGR02247 155 PRIYQLMLERLG------VAPEECVFLDD-LGSNLKP 184 (211)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHH
Confidence 456788888888 67899999999 8888544
No 310
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=53.97 E-value=5.9 Score=39.24 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV 803 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD 803 (844)
-.....+++++| .+++.++.||| +..|
T Consensus 142 p~~f~~~~~~~~------~~p~~~l~vgD-~~~D 168 (175)
T TIGR01493 142 PVVYELVFDTVG------LPPDRVLMVAA-HQWD 168 (175)
T ss_pred HHHHHHHHHHHC------CCHHHeEeEec-Chhh
Confidence 445577788888 67899999999 6666
No 311
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=51.30 E-value=29 Score=33.12 Aligned_cols=48 Identities=8% Similarity=0.131 Sum_probs=34.6
Q ss_pred CCCceEEEEeeCCCch--hhc--cCcEE-EeC--CCC---cchhhhcCCHHHHHHHHHH
Q 003145 788 TAIDYVLCIGHFLGKV--LLT--QFLIQ-VGS--SIN---SLSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 788 ~~~d~vlaiGD~~~nD--Mf~--g~~Ia-vgn--a~~---~~a~~~l~~~~~v~~~l~~ 836 (844)
.+.++++++|| +-|| |++ .+||. +++ +.+ ..|...+.+..+++++++-
T Consensus 91 k~~~k~vmVGn-GaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 91 KRYEKVVMVGN-GANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred CCCcEEEEecC-CcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 45789999999 9999 555 67776 443 222 3466678888888887754
No 312
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=50.96 E-value=17 Score=36.98 Aligned_cols=60 Identities=12% Similarity=0.032 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cCc---EEEeCCC-C----cchhhhcCCHHHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QFL---IQVGSSI-N----SLSKEKKRKVHQLFGIFL 835 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~~---Iavgna~-~----~~a~~~l~~~~~v~~~l~ 835 (844)
|...+..++++++ .+++.+++||| +.+|+.. |+. +.=|... + ..+.+.++++.++..++.
T Consensus 133 ~~~~~~~~~~~~~------~~~~~~l~igD-~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 133 APDIVREALRLLD------VPPEDAVMVGD-AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred ChHHHHHHHHHcC------CChhheEEEcC-CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 5677888899988 67899999999 8889433 432 2222221 1 235678999999987653
No 313
>PLN03190 aminophospholipid translocase; Provisional
Probab=48.93 E-value=1.2e+02 Score=40.01 Aligned_cols=45 Identities=16% Similarity=0.133 Sum_probs=34.8
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 669 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG 669 (844)
++.+.+.+++++|.+ .|++|+++||-............ +++..+.
T Consensus 726 ~lr~~v~~~I~~l~~-agi~v~mlTGD~~~tAi~IA~s~--~Ll~~~~ 770 (1178)
T PLN03190 726 KLQQGVPEAIESLRT-AGIKVWVLTGDKQETAISIGYSS--KLLTNKM 770 (1178)
T ss_pred CCchhHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHh--CCCCCCC
Confidence 467889999999987 59999999999998887766653 3444443
No 314
>COG4996 Predicted phosphatase [General function prediction only]
Probab=47.92 E-value=49 Score=31.57 Aligned_cols=68 Identities=21% Similarity=0.235 Sum_probs=41.8
Q ss_pred eEEEEecCCccCCCCCC-----CCCCC-----ccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 592 RLLILGFNATLTEPVDT-----PGRRG-----DQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 592 rLi~lD~DGTL~~~~~~-----p~~~~-----~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
++|+||.||||.+..+. |=.+- ..+......+-+.+++.|+.+.. .|..+-.+|=......-+.+..+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warn-sG~i~~~~sWN~~~kA~~aLral 78 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARN-SGYILGLASWNFEDKAIKALRAL 78 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHh-CCcEEEEeecCchHHHHHHHHHh
Confidence 57999999999987531 10110 00111223456778888888776 68888787776655554555544
No 315
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=46.25 E-value=14 Score=37.94 Aligned_cols=16 Identities=13% Similarity=0.320 Sum_probs=14.2
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
+.++|+||+||||++.
T Consensus 2 ~~~~viFD~DGTL~ds 17 (214)
T PRK13288 2 KINTVLFDLDGTLINT 17 (214)
T ss_pred CccEEEEeCCCcCccC
Confidence 3579999999999987
No 316
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=46.16 E-value=58 Score=34.28 Aligned_cols=62 Identities=5% Similarity=0.168 Sum_probs=41.6
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC-CChhhHHHh
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG-SDRNVLDKN 656 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~~~ 656 (844)
+..++.+.|...-..+++.|+|||+.... ...+.++++++..+..|.+.=| |+.++++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~~-------------------~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l 91 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGKP-------------------KNLDVVKNIIRETGLKVQVGGGLRTYESIKDA 91 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCCc-------------------chHHHHHHHHhhCCCCEEEcCCCCCHHHHHHH
Confidence 56677777877666799999999996541 2466677776644444444433 567788777
Q ss_pred hc
Q 003145 657 FQ 658 (844)
Q Consensus 657 ~~ 658 (844)
+.
T Consensus 92 ~~ 93 (228)
T PRK04128 92 YE 93 (228)
T ss_pred HH
Confidence 65
No 317
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=45.64 E-value=11 Score=37.58 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=24.8
Q ss_pred CHHHHHHHH---HHHhcccCcCCCCCceEEEEeeCCCch--hhc
Q 003145 768 TKGAAIDRI---LAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT 806 (844)
Q Consensus 768 nKG~al~~L---l~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~ 806 (844)
+|..+++.+ ... + .+.+.++++|| +.+| |++
T Consensus 157 ~K~~~l~~~~~~~~~-~------~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-D------IDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-T------HTCCEEEEEES-SGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-C------CCCCeEEEEEC-CHHHHHHhC
Confidence 699999999 433 3 45789999999 9999 664
No 318
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=45.43 E-value=4.4e+02 Score=30.23 Aligned_cols=99 Identities=14% Similarity=0.105 Sum_probs=58.9
Q ss_pred CCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCC-------CCchhhccCC-eEEECCCCHHH
Q 003145 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-------AGAAQSLGAG-AILVNPWNITE 516 (844)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~-------~G~~~~lg~~-g~lvnP~d~~~ 516 (844)
...+++.+ ++..||+++.. -|+|. ..|++..+ .|+|+=-. +...+.+|.| ++...+.+.+.
T Consensus 289 ~~~~p~~~---~l~~ad~vI~h---GG~gt-t~eaL~~g----vP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~ 357 (406)
T COG1819 289 ADYVPQLE---LLPRADAVIHH---GGAGT-TSEALYAG----VPLVVIPDGADQPLNAERVEELGAGIALPFEELTEER 357 (406)
T ss_pred ecCCCHHH---HhhhcCEEEec---CCcch-HHHHHHcC----CCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHH
Confidence 56677666 78899999965 67776 56888874 33333211 1112223433 33444799999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 003145 517 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (844)
Q Consensus 517 ~A~ai~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (844)
++++|.++|+++. -+++.+++.+....++...=+...|
T Consensus 358 l~~av~~vL~~~~--~~~~~~~~~~~~~~~~g~~~~a~~l 395 (406)
T COG1819 358 LRAAVNEVLADDS--YRRAAERLAEEFKEEDGPAKAADLL 395 (406)
T ss_pred HHHHHHHHhcCHH--HHHHHHHHHHHhhhcccHHHHHHHH
Confidence 9999999998653 3333344445555555444333333
No 319
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=44.85 E-value=38 Score=33.98 Aligned_cols=84 Identities=11% Similarity=0.098 Sum_probs=51.9
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCCccCCCCC---------CCCCC---C--ccccc-----cccCCChhHHHHHHHhhcC
Q 003145 577 LREADSIERYLRSNNRLLILGFNATLTEPVD---------TPGRR---G--DQIRE-----MELKLHPDLKQPLNALCHD 637 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~---------~p~~~---~--~~~~~-----~~~~~~~~~~~~L~~L~~d 637 (844)
.+++++..+...-+.-.+-||+|.|++=... .|++. . ..+.. ..-.++.+....|-.+-..
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 3566777766666666788999999874321 11110 0 00000 2235666666666666655
Q ss_pred CCCcEEEEcCCChhhHHHhhccc
Q 003145 638 PKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 638 ~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
.|-.|+.+|||+....+..-+.+
T Consensus 129 RGD~i~FvTGRt~gk~d~vsk~L 151 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDTVSKTL 151 (237)
T ss_pred cCCeEEEEecCCCCcccccchhH
Confidence 79999999999987666544444
No 320
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=44.67 E-value=38 Score=34.94 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhccCcEEEeCC-------CCcchhhhcCCHHHHHHHHHH
Q 003145 766 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLTQFLIQVGSS-------INSLSKEKKRKVHQLFGIFLR 836 (844)
Q Consensus 766 gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~g~~Iavgna-------~~~~a~~~l~~~~~v~~~l~~ 836 (844)
|..|+.+++.+.. ..+.++++|| +.+| |.+..++.+... ....+-..+.+-.++...|+.
T Consensus 142 g~~K~~~l~~~~~----------~~~~~i~iGD-g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 142 GCCKPSLIRKLSE----------PNDYHIVIGD-SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCCHHHHHHHHhh----------cCCcEEEEeC-CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 3458888876632 3578999999 9999 555333333321 112233346777777777765
Q ss_pred Hh
Q 003145 837 FS 838 (844)
Q Consensus 837 ~~ 838 (844)
..
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 43
No 321
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=44.07 E-value=13 Score=37.89 Aligned_cols=14 Identities=14% Similarity=0.320 Sum_probs=0.0
Q ss_pred eEEEEecCCccCCC
Q 003145 592 RLLILGFNATLTEP 605 (844)
Q Consensus 592 rLi~lD~DGTL~~~ 605 (844)
++++||+||||++.
T Consensus 1 ~~viFDldgvL~d~ 14 (199)
T PRK09456 1 MLYIFDLGNVIVDI 14 (199)
T ss_pred CEEEEeCCCccccC
No 322
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=43.96 E-value=19 Score=30.42 Aligned_cols=37 Identities=11% Similarity=0.067 Sum_probs=26.4
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCC-Cchhhc----c-CcEEEeCC
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFL-GKVLLT----Q-FLIQVGSS 815 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~-~nDMf~----g-~~Iavgna 815 (844)
.+..+++.++ .+++.+++||| . ..|+.. | .+|.|..+
T Consensus 9 ~~~~a~~~~~------~~~~~~~~VGD-~~~~Di~~a~~~G~~~ilV~tG 51 (75)
T PF13242_consen 9 MLEQALKRLG------VDPSRCVMVGD-SLETDIEAAKAAGIDTILVLTG 51 (75)
T ss_dssp HHHHHHHHHT------SGGGGEEEEES-STTTHHHHHHHTTSEEEEESSS
T ss_pred HHHHHHHHcC------CCHHHEEEEcC-CcHhHHHHHHHcCCcEEEECCC
Confidence 4567778887 67899999999 8 889554 2 34555554
No 323
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=43.29 E-value=1.8e+02 Score=32.10 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=59.8
Q ss_pred CCcEEEEEecc--cccCCH---HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCC
Q 003145 362 GRKVMLGVDRL--DMIKGI---PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 436 (844)
Q Consensus 362 ~~~vil~VdRl--d~~KGi---~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~ 436 (844)
...+.+-||-= .+.=+- ..++..+..+.+.++ ..++ |...-|+. + +..+.+.++.+.
T Consensus 146 ~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-----~~~~-vttSRRTp-~---~~~~~L~~~~~~-------- 207 (311)
T PF06258_consen 146 RPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-----GSLL-VTTSRRTP-P---EAEAALRELLKD-------- 207 (311)
T ss_pred CCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-----CeEE-EEcCCCCc-H---HHHHHHHHhhcC--------
Confidence 45566666631 122222 266677777777765 2344 33333443 2 233344433321
Q ss_pred CcccEEEeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC
Q 003145 437 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG 497 (844)
Q Consensus 437 ~~~pv~~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G 497 (844)
..-+.++. .-+..=+.+++..||.+++|.= -.++ +.||+++| .||.+-+..+
T Consensus 208 -~~~~~~~~-~~~~nPy~~~La~ad~i~VT~D--SvSM-vsEA~~tG----~pV~v~~l~~ 259 (311)
T PF06258_consen 208 -NPGVYIWD-GTGENPYLGFLAAADAIVVTED--SVSM-VSEAAATG----KPVYVLPLPG 259 (311)
T ss_pred -CCceEEec-CCCCCcHHHHHHhCCEEEEcCc--cHHH-HHHHHHcC----CCEEEecCCC
Confidence 11243333 3334458899999999999974 4444 67999986 5666555555
No 324
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=43.12 E-value=3e+02 Score=28.75 Aligned_cols=48 Identities=33% Similarity=0.372 Sum_probs=28.9
Q ss_pred ceEEEeCCCCchhhccCC----eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003145 488 GVLILSEFAGAAQSLGAG----AILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (844)
Q Consensus 488 g~lVlSe~~G~~~~lg~~----g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 539 (844)
.|++.-|-+|++--+|.+ .+=|+|.+-.++|.||+--+ +|.++|.+++
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~a 237 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERA 237 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHH
Confidence 566666655555544222 34678888789999887443 3445555433
No 325
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=42.39 E-value=3.4e+02 Score=30.42 Aligned_cols=70 Identities=14% Similarity=0.228 Sum_probs=46.5
Q ss_pred HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCc---hhhc-------cCC-eEEECC--CCHHHH
Q 003145 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA---AQSL-------GAG-AILVNP--WNITEV 517 (844)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~---~~~l-------g~~-g~lvnP--~d~~~~ 517 (844)
+++..+|+.||+++.-+= +.+..|+++++ .|.|+--+... .++. ..+ |..+.. .+.+.+
T Consensus 244 ~~m~~~~~~adlvIsr~G----~~t~~E~~~~g----~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l 315 (352)
T PRK12446 244 GELPDILAITDFVISRAG----SNAIFEFLTLQ----KPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSL 315 (352)
T ss_pred hhHHHHHHhCCEEEECCC----hhHHHHHHHcC----CCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHH
Confidence 578899999998886532 57789999996 56666544321 1222 122 444433 357899
Q ss_pred HHHHHHHhcCC
Q 003145 518 ANAIARALNMS 528 (844)
Q Consensus 518 A~ai~~aL~m~ 528 (844)
+++|.++++++
T Consensus 316 ~~~l~~ll~~~ 326 (352)
T PRK12446 316 IKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHcCH
Confidence 99999998754
No 326
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=42.11 E-value=40 Score=35.11 Aligned_cols=15 Identities=20% Similarity=0.330 Sum_probs=13.2
Q ss_pred CeEEEEecCCccCCC
Q 003145 591 NRLLILGFNATLTEP 605 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~ 605 (844)
.|+|+||+||||++.
T Consensus 10 ~k~vIFDlDGTL~d~ 24 (224)
T PRK14988 10 VDTVLLDMDGTLLDL 24 (224)
T ss_pred CCEEEEcCCCCccch
Confidence 678999999999985
No 327
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.06 E-value=15 Score=37.89 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=0.0
Q ss_pred cCCeEEEEecCCccCCC
Q 003145 589 SNNRLLILGFNATLTEP 605 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~ 605 (844)
+..|.|+||+||||++.
T Consensus 2 ~~~k~i~FD~d~TL~d~ 18 (229)
T COG1011 2 MMIKAILFDLDGTLLDF 18 (229)
T ss_pred CceeEEEEecCCccccc
No 328
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=41.83 E-value=64 Score=29.38 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHH
Q 003145 379 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRL 418 (844)
Q Consensus 379 ~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l 418 (844)
..|...++++++.+|+.+ +|+||..+..|..-|.++
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~i 84 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAEI 84 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHHH
Confidence 578889999999999876 888898777775556443
No 329
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=41.36 E-value=64 Score=35.51 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=46.6
Q ss_pred HHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhh------c-c-CCeEEECCCCHHHHHHHHH
Q 003145 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS------L-G-AGAILVNPWNITEVANAIA 522 (844)
Q Consensus 451 ~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~------l-g-~~g~lvnP~d~~~~A~ai~ 522 (844)
+++.++|..||+++..+ |++ +..|+++++ .|+|+.-..|-.++ + . ..|+.++..+. ++.+++.
T Consensus 239 ~~~~~~l~~ad~vI~~~---G~~-t~~Ea~~~g----~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~ 309 (321)
T TIGR00661 239 DNFKELIKNAELVITHG---GFS-LISEALSLG----KPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAIL 309 (321)
T ss_pred HHHHHHHHhCCEEEECC---ChH-HHHHHHHcC----CCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHH
Confidence 78999999999999876 554 588999996 67777766664443 2 1 23666666665 4455555
Q ss_pred HHhcCC
Q 003145 523 RALNMS 528 (844)
Q Consensus 523 ~aL~m~ 528 (844)
+.++++
T Consensus 310 ~~~~~~ 315 (321)
T TIGR00661 310 DIRNMK 315 (321)
T ss_pred hccccc
Confidence 555443
No 330
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=41.29 E-value=31 Score=37.54 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=41.2
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.-.|+||.||.|..-. .+-|.+.++|..|.+. |..++++|--+....+.+++..
T Consensus 21 ~~DtfifDcDGVlW~g~---------------~~ipGs~e~l~~L~~~-gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWLGE---------------KPIPGSPEALNLLKSL-GKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred hcCEEEEcCCcceeecC---------------CCCCChHHHHHHHHHc-CCcEEEEeCCCcchHHHHHHHH
Confidence 45679999999999742 2345677777777774 6889999988888777777654
No 331
>PRK06769 hypothetical protein; Validated
Probab=40.95 E-value=33 Score=34.22 Aligned_cols=58 Identities=7% Similarity=-0.020 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCC--CC-----------cchhhhcCCHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSS--IN-----------SLSKEKKRKVHQLF 831 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna--~~-----------~~a~~~l~~~~~v~ 831 (844)
-..+.+++++++ .+++.+++||| ..+|+.. |+ .|.+..+ .+ ..+.+.+.++.++.
T Consensus 96 p~~~~~~~~~l~------~~p~~~i~IGD-~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~ 168 (173)
T PRK06769 96 TGMLLQAAEKHG------LDLTQCAVIGD-RWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAV 168 (173)
T ss_pred HHHHHHHHHHcC------CCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHH
Confidence 446667788887 67899999999 8889654 32 3444332 11 12455688888887
Q ss_pred HHH
Q 003145 832 GIF 834 (844)
Q Consensus 832 ~~l 834 (844)
.+|
T Consensus 169 ~~l 171 (173)
T PRK06769 169 NWI 171 (173)
T ss_pred HHH
Confidence 765
No 332
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=40.75 E-value=21 Score=36.36 Aligned_cols=58 Identities=7% Similarity=0.003 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEE--eCCC-C----cchhhhcCCHHHHHHH
Q 003145 769 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQV--GSSI-N----SLSKEKKRKVHQLFGI 833 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iav--gna~-~----~~a~~~l~~~~~v~~~ 833 (844)
+-.++.+++++++ .+++.+++||| +.+|+-. |+ .|.+ |... + ..|.+.++++.++..+
T Consensus 143 ~p~~~~~~~~~~~------~~~~~~~~igD-s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 143 HPDPLLLAAERLG------VAPQQMVYVGD-SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred ChHHHHHHHHHcC------CChhHeEEeCC-CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 4568889999998 67899999999 8899433 43 3334 3221 1 2356778888887664
No 333
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=40.30 E-value=95 Score=36.86 Aligned_cols=82 Identities=20% Similarity=0.055 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHHHhCcEEE-EcCCCcCCChhHhhhhhccc--------------------CCCc-eEEEeCCCCchhhc
Q 003145 445 DRSLDFPALCALYAVTDVAL-VTSLRDGMNLVSYEFVACQD--------------------LKKG-VLILSEFAGAAQSL 502 (844)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v-~~S~~EG~~Lv~~Eama~~~--------------------~~~g-~lVlSe~~G~~~~l 502 (844)
+|.++.+|+..+++.|-||| +-.-+| |=.++||+|.|. +++. -=+.|....+...+
T Consensus 327 HG~l~~~ef~~lL~~akvfiGlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~i 404 (559)
T PF15024_consen 327 HGILSGDEFQQLLRKAKVFIGLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFI 404 (559)
T ss_pred cCcCCHHHHHHHHHhhhEeeecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhC
Confidence 58899999999999999999 344467 457999999870 0000 12344444333345
Q ss_pred c-CCeEEECCCCHHHHHHHHHHHhcCC
Q 003145 503 G-AGAILVNPWNITEVANAIARALNMS 528 (844)
Q Consensus 503 g-~~g~lvnP~d~~~~A~ai~~aL~m~ 528 (844)
| ..-+.|+-.|.+++-+||+++|.++
T Consensus 405 G~PhVytVd~~n~~~v~~Avk~il~~~ 431 (559)
T PF15024_consen 405 GEPHVYTVDINNSTEVEAAVKAILATP 431 (559)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHhcC
Confidence 5 3568899999999999999999875
No 334
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=39.63 E-value=23 Score=38.69 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=29.3
Q ss_pred EEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCC---cEEEEc
Q 003145 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT---TIVVLS 646 (844)
Q Consensus 593 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~---~V~I~S 646 (844)
-|+||+||.|+-- .++-+...++|+.|.+++|+ .++++|
T Consensus 37 gfafDIDGVL~RG---------------~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 37 GFAFDIDGVLFRG---------------HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred eEEEecccEEEec---------------CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 5999999999964 34667899999999986544 444444
No 335
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=39.59 E-value=25 Score=39.43 Aligned_cols=56 Identities=13% Similarity=0.283 Sum_probs=36.1
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG 647 (844)
-..|+++|||||||+.... +.-...-+.+-..+.++.-.-|++|.+ +|+.++|.|-
T Consensus 73 ~~~K~i~FD~dgtlI~t~s--g~vf~~~~~dw~~l~~~vp~Klktl~~-~g~~l~iftn 128 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKS--GKVFPKGSMDWRILFPEVPSKLKTLYQ-DGIKLFIFTN 128 (422)
T ss_pred CCcceEEEecCCceeecCC--cceeeccCccceeeccccchhhhhhcc-CCeEEEEEec
Confidence 3568999999999997632 100000000123456677778889988 5999999874
No 336
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=39.42 E-value=30 Score=35.95 Aligned_cols=19 Identities=26% Similarity=0.441 Sum_probs=15.1
Q ss_pred hcCCeEEEEecCCccCCCC
Q 003145 588 RSNNRLLILGFNATLTEPV 606 (844)
Q Consensus 588 ~sk~rLi~lD~DGTL~~~~ 606 (844)
++.+.|++||+|-|+++..
T Consensus 10 ~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 10 SSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cCCcEEEEEecCceeecCC
Confidence 4567789999999998764
No 337
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=38.79 E-value=13 Score=36.64 Aligned_cols=11 Identities=9% Similarity=0.579 Sum_probs=0.0
Q ss_pred EEEecCCccCC
Q 003145 594 LILGFNATLTE 604 (844)
Q Consensus 594 i~lD~DGTL~~ 604 (844)
++||+||||++
T Consensus 2 vlFDlDgtLv~ 12 (183)
T TIGR01509 2 ILFDLDGVLVD 12 (183)
T ss_pred eeeccCCceec
No 338
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=38.40 E-value=27 Score=33.65 Aligned_cols=41 Identities=20% Similarity=0.390 Sum_probs=35.0
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.++.+.+.++|++|.+ .+..++|+|+.+...+...+..+++
T Consensus 76 ~~~~~~~~~~L~~l~~-~~~~~~i~Sn~~~~~~~~~l~~~~~ 116 (176)
T PF13419_consen 76 LQPYPGVRELLERLKA-KGIPLVIVSNGSRERIERVLERLGL 116 (176)
T ss_dssp EEESTTHHHHHHHHHH-TTSEEEEEESSEHHHHHHHHHHTTH
T ss_pred cchhhhhhhhhhhccc-ccceeEEeecCCccccccccccccc
Confidence 3466789999999987 4999999999999999888888754
No 339
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=36.88 E-value=79 Score=30.07 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=45.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhH-HHhhcc
Q 003145 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL-DKNFQE 659 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l-~~~~~~ 659 (844)
.+++-+|+|+|+-|....+|+.+ ....+-+.....|..|.+ .|++.+++|--.-..+ ...+..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g-----~e~~fY~Di~rIL~dLk~-~GVtl~~ASRt~ap~iA~q~L~~ 81 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKG-----EEMIFYDDIRRILVDLKK-LGVTLIHASRTMAPQIASQGLET 81 (144)
T ss_pred eEEEEecccccccccccCcccCc-----ceeeeccchhHHHHHHHh-cCcEEEEecCCCCHHHHHHHHHH
Confidence 47899999999999877775321 234456778899999987 6999999997765443 344433
No 340
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=36.39 E-value=2.8e+02 Score=29.94 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc------cC--CeEEECCC--CHHHH
Q 003145 448 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL------GA--GAILVNPW--NITEV 517 (844)
Q Consensus 448 v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l------g~--~g~lvnP~--d~~~~ 517 (844)
.+..++..++..||+++-.+ |+|+ ..|++++| .|.++=...|..|+. .. -|..+++. +.+.+
T Consensus 239 ~~~~~~~~~m~~ad~vIs~~---G~~t-~~Ea~~~g----~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 239 FSTPDFAELMAAADLVISKG---GYTT-ISEALALG----KPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred cChHHHHHHHHhCCEEEECC---CHHH-HHHHHHcC----CCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 34578899999999998763 5553 78999996 566655555655554 12 24444443 46777
Q ss_pred HHHHHH
Q 003145 518 ANAIAR 523 (844)
Q Consensus 518 A~ai~~ 523 (844)
+++|.+
T Consensus 311 ~~~l~~ 316 (318)
T PF13528_consen 311 AEFLER 316 (318)
T ss_pred HHHHhc
Confidence 777764
No 341
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=36.21 E-value=4.8e+02 Score=28.07 Aligned_cols=44 Identities=20% Similarity=0.349 Sum_probs=28.4
Q ss_pred HHHHhhCCCCCEEEEeCccchhHHHHHHhcCCCCeEEEEEecCCCChhhhhcCCccHHHHHh
Q 003145 223 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 284 (844)
Q Consensus 223 ~~i~~~~~~~DiVwvHDyhl~llp~~lr~~~~~~~i~~flH~Pfp~~e~~r~lp~r~~ll~~ 284 (844)
++|.+..+.-|+|.|-.||.- +|+||-..-+-.+.-...+|..+
T Consensus 57 ~~i~~~ak~a~VitISHYHYD------------------HhtPf~~~~y~~s~e~~~eiY~g 100 (304)
T COG2248 57 EKIQRYAKKADVITISHYHYD------------------HHTPFFDGIYEASGETAKEIYKG 100 (304)
T ss_pred HHHHHHHhhCCEEEEeeeccc------------------cCCccccchhhhcccchHHHhcC
Confidence 566666777899999888865 79997654443433333444443
No 342
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=36.00 E-value=61 Score=32.37 Aligned_cols=59 Identities=8% Similarity=-0.031 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----cC-cEEEeCCC------Ccch--hhhcCCHHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----QF-LIQVGSSI------NSLS--KEKKRKVHQLFGIFL 835 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g~-~Iavgna~------~~~a--~~~l~~~~~v~~~l~ 835 (844)
-..+..+++.++ .+++++++||| +.+|+.. |+ .|.+..+. ...+ .+.++++.++..+|.
T Consensus 106 p~~~~~~~~~l~------~~~~~~~~VgD-s~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLN------IDLAGSPMVGD-SLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcC------CChhhEEEEeC-CHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 456677888888 67899999999 8889433 43 33343321 1123 567888888877764
No 343
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=34.65 E-value=45 Score=33.90 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.+.+.+.|++|.+ .|..++|+||.+...+...++.+++
T Consensus 76 ~~~g~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~~l 114 (205)
T TIGR01454 76 VFPGVPELLAELRA-DGVGTAIATGKSGPRARSLLEALGL 114 (205)
T ss_pred cCCCHHHHHHHHHH-CCCeEEEEeCCchHHHHHHHHHcCC
Confidence 55789999999987 4899999999999999888877654
No 344
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=34.61 E-value=3.4e+02 Score=30.22 Aligned_cols=87 Identities=18% Similarity=0.219 Sum_probs=48.2
Q ss_pred CCcEEEEEecccccCCHHH-HHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003145 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (844)
Q Consensus 362 ~~~vil~VdRld~~KGi~~-~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~p 440 (844)
++.+++..|--.+.|.-+. .+.++.+.+.+. . ..++++|+|.. .+. ...+++++.++. .+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-~----~~vvl~ggp~e---~e~----~~~~~i~~~~~~-------~~ 243 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQAR-G----YEVVLTSGPDK---DDL----ACVNEIAQGCQT-------PP 243 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHC-C----CeEEEEcCCCh---HHH----HHHHHHHHhcCC-------Cc
Confidence 4566777776556777552 333443333332 2 23555665431 111 112223222211 13
Q ss_pred EEEeCCCCCHHHHHHHHHhCcEEEEcC
Q 003145 441 IHHLDRSLDFPALCALYAVTDVALVTS 467 (844)
Q Consensus 441 v~~~~~~v~~~el~aly~~ADv~v~~S 467 (844)
+.-+.|..+-.|+.++++.||++|-+-
T Consensus 244 ~~~l~g~~sL~el~ali~~a~l~v~nD 270 (352)
T PRK10422 244 VTALAGKTTFPELGALIDHAQLFIGVD 270 (352)
T ss_pred cccccCCCCHHHHHHHHHhCCEEEecC
Confidence 444688899999999999999998764
No 345
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=34.34 E-value=46 Score=33.87 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=33.4
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+-+.+.++|+.|.+ .|.+++|+|+.+...++.+++.+++
T Consensus 86 ~~~g~~~~L~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~l 124 (213)
T TIGR01449 86 VFPGVEATLGALRA-KGLRLGLVTNKPTPLARPLLELLGL 124 (213)
T ss_pred cCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCc
Confidence 45678999999987 5899999999999999998888654
No 346
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=33.74 E-value=34 Score=34.62 Aligned_cols=28 Identities=21% Similarity=0.134 Sum_probs=22.7
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT 806 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~ 806 (844)
.+..+++.++ .++..|+++|| +.|| |++
T Consensus 183 ~~~~~i~~l~------~~~~~v~~vGD-g~nD~~al~ 212 (215)
T PF00702_consen 183 IFLRIIKELQ------VKPGEVAMVGD-GVNDAPALK 212 (215)
T ss_dssp HHHHHHHHHT------CTGGGEEEEES-SGGHHHHHH
T ss_pred hHHHHHHHHh------cCCCEEEEEcc-CHHHHHHHH
Confidence 6677888887 56789999999 9999 554
No 347
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=32.70 E-value=2.1e+02 Score=35.72 Aligned_cols=58 Identities=10% Similarity=0.291 Sum_probs=46.9
Q ss_pred HHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 585 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 585 ~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.|......|.|+.+=|-+=| |-++++++++.+.+ .|+.|..+||-.....+.+..+++
T Consensus 565 ~~~~~E~~LtFvGlVGi~DP------------------PR~ev~~ai~~c~~-aGIrV~mITGD~~~TA~AI~r~iG 622 (972)
T KOG0202|consen 565 NRATAESDLTFVGLVGILDP------------------PRPEVADAIELCRQ-AGIRVIMITGDNKETAEAIAREIG 622 (972)
T ss_pred cccccccceEEEEEeeccCC------------------CchhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHhC
Confidence 45566778999998774322 45789999999876 699999999999999998888755
No 348
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=32.63 E-value=51 Score=35.20 Aligned_cols=64 Identities=6% Similarity=-0.132 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhcccCcCCC-CCceEEEEeeCCCchhhc----cC-cEEEeCCC--------------------------
Q 003145 769 KGAAIDRILAEIVHSKKMKT-AIDYVLCIGHFLGKVLLT----QF-LIQVGSSI-------------------------- 816 (844)
Q Consensus 769 KG~al~~Ll~~l~~~~~~~~-~~d~vlaiGD~~~nDMf~----g~-~Iavgna~-------------------------- 816 (844)
+-..+..++++++ . +++.+++||| +.+|+-. |+ .|.|..+.
T Consensus 160 ~p~~~~~a~~~l~------~~~~~e~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T PRK13478 160 YPWMALKNAIELG------VYDVAACVKVDD-TVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERAR 232 (267)
T ss_pred ChHHHHHHHHHcC------CCCCcceEEEcC-cHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 3556778888888 5 3689999999 8899554 32 33343321
Q ss_pred Cc----chhhhcCCHHHHHHHHHHHhh
Q 003145 817 NS----LSKEKKRKVHQLFGIFLRFSY 839 (844)
Q Consensus 817 ~~----~a~~~l~~~~~v~~~l~~~~~ 839 (844)
+. -|.+.++++.++..+|..+..
T Consensus 233 ~~l~~~~a~~vi~~~~~l~~~l~~~~~ 259 (267)
T PRK13478 233 ARLRAAGAHYVIDTIADLPAVIADIEA 259 (267)
T ss_pred HHHHHcCCCeehhhHHHHHHHHHHHHH
Confidence 11 244568889888888766654
No 349
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=31.89 E-value=58 Score=33.29 Aligned_cols=16 Identities=13% Similarity=0.297 Sum_probs=13.8
Q ss_pred CeEEEEecCCccCCCC
Q 003145 591 NRLLILGFNATLTEPV 606 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~ 606 (844)
.|+++||+||||++..
T Consensus 1 ~k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQ 16 (224)
T ss_pred CCEEEEcCcCcccccc
Confidence 3789999999999873
No 350
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=31.54 E-value=86 Score=39.46 Aligned_cols=224 Identities=12% Similarity=0.080 Sum_probs=115.6
Q ss_pred ccHHHHHHHHHhcCCeEEEEecCC----ccCCCCCCCCC-CCccc-----cccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 577 LREADSIERYLRSNNRLLILGFNA----TLTEPVDTPGR-RGDQI-----REMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 577 l~~~~~~~~y~~sk~rLi~lD~DG----TL~~~~~~p~~-~~~~~-----~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
-|.++.++.|.....|+|++-.-- ||.....-++. ..+.+ --+..++.++++..|++|.+ .++..+.+|
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~-AnIRtVMcT 728 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNR-ANIRTVMCT 728 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHh-hcceEEEEc
Confidence 389999999999999999986521 22111100000 00000 01346788899999999987 599999999
Q ss_pred CCChhhHHHhhcccCceEEeecceEEEe--c--------CCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccc
Q 003145 647 GSDRNVLDKNFQEYNLWLAAENGMFLRC--T--------TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET 716 (844)
Q Consensus 647 GR~~~~l~~~~~~l~l~liaenG~~i~~--~--------~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~ 716 (844)
|-+....-...+ +.|++.+-+-.+.. . .-.|...- . .+. .....+...+.+.+..--+...
T Consensus 729 GDNllTaisVak--eCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve-~-~~~-----~~~~~~~~~~~~~~~~~~d~~~ 799 (1140)
T KOG0208|consen 729 GDNLLTAISVAK--ECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVE-S-QTQ-----FLDPKEPDPDLASVKLSLDVLS 799 (1140)
T ss_pred CCchheeeehhh--cccccCCCCeEEEEeccCCccCCCceeEEEEcc-C-ccc-----cCCCCccCccccCCccChhhhc
Confidence 998766544443 35566665554432 1 11365421 0 000 0000000000011110000001
Q ss_pred eEEEEeecCChhhhHHH--HHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEE
Q 003145 717 SLVWNYKYADVEFGRIQ--ARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 794 (844)
Q Consensus 717 sl~~hy~~~d~e~~~~q--a~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vl 794 (844)
.-.+|..-..+.|...- -.++..++ +.+..+-. |..--.|..-++.+ +++| -.|.
T Consensus 800 ~~~yhlA~sG~~f~~i~~~~~~l~~~I----l~~~~VfA---------RMsP~qK~~Lie~l-Qkl~---------y~Vg 856 (1140)
T KOG0208|consen 800 EKDYHLAMSGKTFQVILEHFPELVPKI----LLKGTVFA---------RMSPDQKAELIEAL-QKLG---------YKVG 856 (1140)
T ss_pred cceeEEEecCchhHHHHhhcHHHHHHH----HhcCeEEe---------ecCchhHHHHHHHH-HhcC---------cEEE
Confidence 11244433334443221 22333333 22222222 22223677777665 4454 3578
Q ss_pred EEeeCCCch--hhc--cCcEEEeCCCCcchhhhcCC---HHHHHHHH
Q 003145 795 CIGHFLGKV--LLT--QFLIQVGSSINSLSKEKKRK---VHQLFGIF 834 (844)
Q Consensus 795 aiGD~~~nD--Mf~--g~~Iavgna~~~~a~~~l~~---~~~v~~~l 834 (844)
..|| +-|| .++ ..||..+.+..++|.-.-++ -.-|.+.+
T Consensus 857 fCGD-GANDCgALKaAdvGISLSeaEASvAApFTSk~~~I~cVp~vI 902 (1140)
T KOG0208|consen 857 FCGD-GANDCGALKAADVGISLSEAEASVAAPFTSKTPSISCVPDVI 902 (1140)
T ss_pred ecCC-CcchhhhhhhcccCcchhhhhHhhcCccccCCCchhhHhHHH
Confidence 8899 9999 888 78999999888877765443 34444443
No 351
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=31.38 E-value=62 Score=33.41 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=24.1
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
+.|.+.+.|+.|.+ .|..++|+||.....++.+++.+
T Consensus 75 l~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 75 IREGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred cCcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 34556666766665 46777777777776666666653
No 352
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=30.93 E-value=87 Score=38.52 Aligned_cols=70 Identities=11% Similarity=0.186 Sum_probs=54.0
Q ss_pred HHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc
Q 003145 581 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 660 (844)
Q Consensus 581 ~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l 660 (844)
...+.+.+...+.+++-.|++++.... ..-.+-+++++++++|.+ .|++++++||-.........+++
T Consensus 415 ~~~~~~a~~G~~~l~va~~~~~lG~i~-----------l~D~~R~~~~eai~~Lr~-~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAEDNRVLGVIY-----------LKDIVKPGIKERFAELRK-MGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHHhCCCcEEEEEECCeEEEEEE-----------EeccCchhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHHHHc
Confidence 344556666678888878888775321 223467899999999988 59999999999999999998887
Q ss_pred Cc
Q 003145 661 NL 662 (844)
Q Consensus 661 ~l 662 (844)
++
T Consensus 483 GI 484 (679)
T PRK01122 483 GV 484 (679)
T ss_pred CC
Confidence 65
No 353
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=29.43 E-value=35 Score=44.22 Aligned_cols=35 Identities=3% Similarity=0.107 Sum_probs=0.0
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcE
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTI 642 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V 642 (844)
+.+.++||+||||++.. +...+++.++.++-|..+
T Consensus 74 ~ikaVIFDlDGTLiDS~------------------~~~~~a~~~~~~~~G~~i 108 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSE------------------EPSRRAAVDVFAEMGVEV 108 (1057)
T ss_pred CCCEEEECCCCCeEeCh------------------HHHHHHHHHHHHHcCCCC
No 354
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=29.40 E-value=1.6e+02 Score=29.02 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=56.5
Q ss_pred CHHHHHHHHHhC---cEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----cCCeEEECCCCHHHHHHH
Q 003145 449 DFPALCALYAVT---DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (844)
Q Consensus 449 ~~~el~aly~~A---Dv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g~~g~lvnP~d~~~~A~a 520 (844)
+.+|-.+..+.+ -+.|---+-+|=||.++|++.....+-..+|++-++.++--+ |..-++.-|-|.+++..|
T Consensus 41 ~~~eal~~art~~PayAvvDlkL~~gsGL~~i~~lr~~~~d~rivvLTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aA 120 (182)
T COG4567 41 SVEEALAAARTAPPAYAVVDLKLGDGSGLAVIEALRERRADMRIVVLTGYASIATAVEAVKLGACDYLAKPADADDILAA 120 (182)
T ss_pred cHHHHHHHHhcCCCceEEEEeeecCCCchHHHHHHHhcCCcceEEEEecchHHHHHHHHHHhhhhhhcCCCCChHHHHHH
Confidence 345555554443 233444556899999999999876667789999998877655 555689999999999999
Q ss_pred HHHH
Q 003145 521 IARA 524 (844)
Q Consensus 521 i~~a 524 (844)
+.+.
T Consensus 121 l~~~ 124 (182)
T COG4567 121 LLRR 124 (182)
T ss_pred Hhhc
Confidence 8876
No 355
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=29.39 E-value=4.6e+02 Score=32.44 Aligned_cols=193 Identities=14% Similarity=0.105 Sum_probs=112.8
Q ss_pred CCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhc-----c----CCeEEECCCCHH
Q 003145 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----G----AGAILVNPWNIT 515 (844)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~l-----g----~~g~lvnP~d~~ 515 (844)
-+.++.+.....++.-++++.|+-|+-.=+.++|+-.++ .+-..+|++...-..+.+ + .-.++.-|+|.-
T Consensus 231 vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~~~a~lIlTgg~~~~~~v~~l~~~a~~~~ipVl~t~~dT~ 309 (684)
T PRK05632 231 VCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-PPIAGLLLTGGYEPDPRIAKLCEGAFETGLPVLSVDTNTY 309 (684)
T ss_pred EEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-CCceEEEEcCCCCCCHHHHHHHhhcccCCCCEEEecCCHH
Confidence 355677788888887777777787777667777762111 111236666544333322 1 123666799999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHhHHHhhhccccCCCCccHHHHHHHHHhcCCeEE
Q 003145 516 EVANAIARALNMSPEEREKRHWHNFTHVTTH-TAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLL 594 (844)
Q Consensus 516 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~sk~rLi 594 (844)
+.|..|.++..--..+-.++.....+.+.+| |..+|.+. |. .. ..+...+.|..-...+.+.-+..++|++
T Consensus 310 ~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~----~~---~~~~~~~~p~~~~~~l~~~a~~~~~~i~ 381 (684)
T PRK05632 310 QTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT----AT---SERSRRLSPPAFRYQLTERARAAKKRIV 381 (684)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc----cC---CCCCCCcCHHHHHHHHHHHHhcCCCEEE
Confidence 9999999776422222233456667777777 87777774 22 10 0122334455566677777776666655
Q ss_pred EEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEEEe
Q 003145 595 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 674 (844)
Q Consensus 595 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~~ 674 (844)
+-. | . .++++++...+.+ .|..-.|.-|+.. .+++.+...++.+ . .+..|.+
T Consensus 382 ~~e--~------~----------------d~~~l~Aa~~~~~-~g~~~~iLvG~~~-~I~~~~~~~~~~l-~-~~~~Ii~ 433 (684)
T PRK05632 382 LPE--G------D----------------EPRTLKAAAICLE-RGIADCVLLGNPE-EIRRVAAAQGVDL-P-AGIEIID 433 (684)
T ss_pred EeC--C------C----------------CHHHHHHHHHHHH-cCCceEEEECCHH-HHHHHHHHcCCCc-c-CCcEEEC
Confidence 432 1 1 3567777777766 4776667778853 5566666544322 1 3555543
No 356
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=29.25 E-value=65 Score=33.05 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.6
Q ss_pred CeEEEEecCCccCCCC
Q 003145 591 NRLLILGFNATLTEPV 606 (844)
Q Consensus 591 ~rLi~lD~DGTL~~~~ 606 (844)
.|+|+||+||||++..
T Consensus 1 ~k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 1 ISLVVLDMAGTTVDED 16 (220)
T ss_pred CcEEEEecCCCeeccC
Confidence 3789999999999873
No 357
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=29.03 E-value=5e+02 Score=27.44 Aligned_cols=112 Identities=18% Similarity=0.174 Sum_probs=62.5
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~ 443 (844)
-++++-+|+...-=+.....-+..|+...| +|++| |+-+...++..+.+...+...+++. . +..
T Consensus 3 ~ll~s~~~~~~~~~l~~~~~~~~~~~~~~~----~v~fI----PtAs~~~~~~~y~~~~~~af~~lG~-------~-v~~ 66 (233)
T PRK05282 3 LLLLSNSTLPGTGYLEHALPLIAELLAGRR----KAVFI----PYAGVTQSWDDYTAKVAEALAPLGI-------E-VTG 66 (233)
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHcCCC----eEEEE----CCCCCCCCHHHHHHHHHHHHHHCCC-------E-EEE
Confidence 356777787774444666666777766332 34444 4433333444444445444444433 2 333
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCC----------CcCCChhHhhhhhcccCCCceEEEeCCCCch
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSL----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAA 499 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~----------~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~ 499 (844)
+.. .++..+.+..||+..++-= .-|+--.+.|++.. |.+++-..||+.
T Consensus 67 l~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~-----G~~~~G~SAGAi 124 (233)
T PRK05282 67 IHR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKN-----GTPYIGWSAGAN 124 (233)
T ss_pred ecc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHC-----CCEEEEECHHHH
Confidence 332 2455677899998777643 12344446677654 677777778874
No 358
>PLN00414 glycosyltransferase family protein
Probab=29.03 E-value=9.7e+02 Score=27.87 Aligned_cols=109 Identities=10% Similarity=0.173 Sum_probs=60.1
Q ss_pred CCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe----CCCCchhhc--c-CCeEEECC-----C
Q 003145 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--G-AGAILVNP-----W 512 (844)
Q Consensus 445 ~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS----e~~G~~~~l--g-~~g~lvnP-----~ 512 (844)
.+.+++.++.+- .+.++||- +-|+|- .+|++++| .|+|+- +..-.+..+ . .-|+.+.. -
T Consensus 317 ~~w~PQ~~vL~h-~~v~~fvt---H~G~nS-~~Ea~~~G----vP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~ 387 (446)
T PLN00414 317 EGWVEQPLILSH-PSVGCFVN---HCGFGS-MWESLVSD----CQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWF 387 (446)
T ss_pred eccCCHHHHhcC-CccceEEe---cCchhH-HHHHHHcC----CCEEecCcccchHHHHHHHHHHhCeEEEeccccCCcc
Confidence 577888775432 22244552 467764 68999984 343332 222222222 1 23556632 4
Q ss_pred CHHHHHHHHHHHhcCCHHH---HHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHh
Q 003145 513 NITEVANAIARALNMSPEE---REKRHWHNFTHVTT-HTAQEWAETFVSELNDT 562 (844)
Q Consensus 513 d~~~~A~ai~~aL~m~~~e---r~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~ 562 (844)
+.+++++++++++..+.++ .+++.++.++.+.. -....+.++|++.+.+.
T Consensus 388 ~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~~~gg~ss~l~~~v~~~~~~ 441 (446)
T PLN00414 388 SKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSPGLLSGYADKFVEALENE 441 (446)
T ss_pred CHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHh
Confidence 7899999999999765322 22333333443332 23256678888777543
No 359
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=28.88 E-value=2.4e+02 Score=26.85 Aligned_cols=70 Identities=24% Similarity=0.340 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHh
Q 003145 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (844)
Q Consensus 380 ~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~ 459 (844)
..+..+..+.+++. +..++||.|...++.+ .+....+++.++++..+|+ .||.+.....+-.+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 45677777777654 4467899887666543 3445567777778777764 389998888887766666654
No 360
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=28.81 E-value=4.1e+02 Score=29.31 Aligned_cols=51 Identities=6% Similarity=0.175 Sum_probs=29.7
Q ss_pred HHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCC
Q 003145 582 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (844)
Q Consensus 582 ~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR 648 (844)
+....+....+..++|+.|-.... .......+.+.+..+. +...|.|+||-
T Consensus 148 ~a~~L~~~Gi~A~~vD~~~~~~~~--------------~~t~~~~i~~~~~~~~--~~~~v~IvtGF 198 (304)
T cd04248 148 TALLLQNRGVNARFVDLSGWRDSG--------------DMTLDERISEAFRDID--PRDELPIVTGY 198 (304)
T ss_pred HHHHHHHCCCCeEEECcccccccC--------------CCCcHHHHHHHHHhhc--cCCcEEEeCCc
Confidence 444444556678888887653321 1112345666666543 35579999995
No 361
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=28.80 E-value=1.2e+02 Score=34.19 Aligned_cols=56 Identities=27% Similarity=0.411 Sum_probs=38.5
Q ss_pred CCeEEEEcC---c--EEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhccCcEEEeC
Q 003145 749 ASVEVVQGS---K--SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLTQFLIQVGS 814 (844)
Q Consensus 749 ~~~~v~~g~---~--~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~g~~Iavgn 814 (844)
.++.+++|. + .|+++|.|++ |..++++|+..+ |....--+.|| +-.+.-=||.+|.
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~~G~d-GarvE~vle~~~------I~~NKNtvpGD---~Sal~PgGiRiGt 400 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRPKGVD-GARVEKVLELCH------IALNKNTVPGD---KSALSPGGIRIGT 400 (477)
T ss_pred cCceEecCCccceEEEEeccccCCc-hHHHHHHHHHhh------hhhcCCcCCCC---ccccCCCceeccc
Confidence 356777653 2 5899999997 677899999887 55555678888 4434433666665
No 362
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=28.66 E-value=67 Score=32.43 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=30.1
Q ss_pred hHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 626 DLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 626 ~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
...++|+.|.+ .|..++|+||++...++..++.+++
T Consensus 110 ~~~~~L~~l~~-~g~~~~i~T~~~~~~~~~~l~~~gl 145 (197)
T TIGR01548 110 TPKGLLRELHR-APKGMAVVTGRPRKDAAKFLTTHGL 145 (197)
T ss_pred CHHHHHHHHHH-cCCcEEEECCCCHHHHHHHHHHcCc
Confidence 34788888876 5899999999999999988887754
No 363
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=28.64 E-value=3e+02 Score=27.93 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=49.3
Q ss_pred CHHHHHHHHH--hCcEEEEcCCCcC----CChhHhhhhhcccCCCceEEEeCCCCchh---hc--cCCeEEECCCCHHHH
Q 003145 449 DFPALCALYA--VTDVALVTSLRDG----MNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEV 517 (844)
Q Consensus 449 ~~~el~aly~--~ADv~v~~S~~EG----~~Lv~~Eama~~~~~~g~lVlSe~~G~~~---~l--g~~g~lvnP~d~~~~ 517 (844)
+.++....+. ..|++++-....+ -|+..++.+........++++|....... .+ |..|++..|.+.+++
T Consensus 37 ~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~~~iIvls~~~~~~~~~~a~~~Ga~~yl~K~~~~~~l 116 (216)
T PRK10840 37 DSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLDIEGIVLKQGAPTDL 116 (216)
T ss_pred CHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCCCcEEEEEecCCHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 3445554443 3688887543333 46666666643222234567776654332 12 677999999999999
Q ss_pred HHHHHHHhc
Q 003145 518 ANAIARALN 526 (844)
Q Consensus 518 A~ai~~aL~ 526 (844)
.++|..++.
T Consensus 117 ~~ai~~v~~ 125 (216)
T PRK10840 117 PKALAALQK 125 (216)
T ss_pred HHHHHHHHC
Confidence 999998875
No 364
>PRK11590 hypothetical protein; Provisional
Probab=28.64 E-value=80 Score=32.48 Aligned_cols=42 Identities=17% Similarity=0.336 Sum_probs=32.5
Q ss_pred hhHHHHH-HHhhcCCCCcEEEEcCCChhhHHHhhcccC----ceEEee
Q 003145 625 PDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLAAE 667 (844)
Q Consensus 625 ~~~~~~L-~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~----l~liae 667 (844)
|.+.+.| +.|.+ .|..++|+|+.+...++.++..++ ..++|.
T Consensus 98 pga~e~L~~~l~~-~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t 144 (211)
T PRK11590 98 PVVQERLTTYLLS-SDADVWLITGSPQPLVEQVYFDTPWLPRVNLIAS 144 (211)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEeCCcHHHHHHHHHHccccccCceEEE
Confidence 5688888 45665 589999999999999998887765 355544
No 365
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=27.04 E-value=1.1e+02 Score=31.44 Aligned_cols=73 Identities=15% Similarity=0.286 Sum_probs=44.8
Q ss_pred ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhccc--CceEEeecceEEEecCCeeeecccccCChHHHH-HHHHHHH
Q 003145 624 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD-SLKHVFE 700 (844)
Q Consensus 624 ~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l--~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~-~v~~i~~ 700 (844)
.+.+.+..+.-.+++....++.|||.-....+++..+ .-+| ..|...+++.++.+..+ ++.|. -+..+|+
T Consensus 56 Ne~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L-~Fd~v~LKp~~~~~~sT------m~fK~~~l~~ll~ 128 (197)
T PF10307_consen 56 NENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGL-EFDAVCLKPENQRFSST------MDFKQAFLEDLLH 128 (197)
T ss_pred hHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCC-CccEEEeCcccccCccc------cHHHHHHHHHHHH
Confidence 4567777776677888889999999975555555543 1122 24556666543444333 34454 5667777
Q ss_pred HHH
Q 003145 701 YFT 703 (844)
Q Consensus 701 ~~~ 703 (844)
+|.
T Consensus 129 ~Y~ 131 (197)
T PF10307_consen 129 TYK 131 (197)
T ss_pred hcC
Confidence 774
No 366
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=26.67 E-value=48 Score=33.06 Aligned_cols=30 Identities=27% Similarity=0.297 Sum_probs=26.4
Q ss_pred HHhhhcCCEEEEecHHHHHHHHHHHHHHhC
Q 003145 282 LRAVLAADLVGFHTYDYARHFVSACTRILG 311 (844)
Q Consensus 282 l~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~ 311 (844)
+-+-|.||.|.|.+.-..+.|+..+..++.
T Consensus 114 i~saLaAD~v~FNS~~nr~sFL~~~~~fL~ 143 (168)
T PF12038_consen 114 IYSALAADRVVFNSAFNRDSFLDGIPSFLK 143 (168)
T ss_pred HHHHHhceeeeecchhhHHHHHHHHHHHHH
Confidence 445678999999999999999999998875
No 367
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.67 E-value=75 Score=33.24 Aligned_cols=51 Identities=22% Similarity=0.177 Sum_probs=31.7
Q ss_pred cCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCceEEeecceEEE
Q 003145 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLR 673 (844)
Q Consensus 621 ~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l~liaenG~~i~ 673 (844)
++..|...++++.|.+ +-+-+|+|-.-.+.+....+.+++..---||..+-
T Consensus 82 a~lvPgA~etm~~l~~--~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~ 132 (315)
T COG4030 82 AKLVPGAEETMATLQE--RWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVD 132 (315)
T ss_pred cccCCChHHHHHHHhc--cCCceEEeccHHHHHHHHHHhcCCCcccccccccc
Confidence 3445556677777765 45556666666777777777776655444555443
No 368
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=26.47 E-value=75 Score=32.93 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.8
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+-+.+.++|.+|.+ .|..++|+|+++...++..++.+++
T Consensus 90 ~~~gv~e~L~~L~~-~g~~l~i~T~k~~~~~~~~l~~~gl 128 (220)
T COG0546 90 LFPGVKELLAALKS-AGYKLGIVTNKPERELDILLKALGL 128 (220)
T ss_pred cCCCHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 34568999999998 6999999999999999999998743
No 369
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=26.35 E-value=80 Score=31.84 Aligned_cols=39 Identities=18% Similarity=0.138 Sum_probs=33.6
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.+.+.+.|+.+.+ .|..++|+||.....++.+.+.+++
T Consensus 88 ~~~~~~~~l~~l~~-~g~~v~ivS~s~~~~v~~~~~~lg~ 126 (202)
T TIGR01490 88 LYPEARDLIRWHKA-EGHTIVLVSASLTILVKPLARILGI 126 (202)
T ss_pred ccHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHcCC
Confidence 56789999999987 5999999999999999988887654
No 370
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=26.25 E-value=1.9e+02 Score=36.05 Aligned_cols=168 Identities=16% Similarity=0.191 Sum_probs=95.0
Q ss_pred cHHHHHHHHHhcCCeEEEEec---CCccCCCCC-----CCCCC--CccccccccCCChhHHHHHHHhhcCCCCcEEEEcC
Q 003145 578 READSIERYLRSNNRLLILGF---NATLTEPVD-----TPGRR--GDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 647 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~---DGTL~~~~~-----~p~~~--~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG 647 (844)
.++.+++.+.+..-|-|++-| +-...+..+ .|... .--+-...-.+-|++.+++++.++ .|++|--+||
T Consensus 593 ~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~-AGItVRMVTG 671 (1034)
T KOG0204|consen 593 SFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR-AGITVRMVTG 671 (1034)
T ss_pred HHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH-cCcEEEEEeC
Confidence 466777777777767666544 333221100 00000 000001234567899999988555 7999999999
Q ss_pred CChhhHHHhhcccCceEEeecceEEEecCCeeeecccccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCCh
Q 003145 648 SDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADV 727 (844)
Q Consensus 648 R~~~~l~~~~~~l~l~liaenG~~i~~~~~~w~~~~~~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~ 727 (844)
-.....+.+..+ .|+...+|-++--.+.++ |+..+
T Consensus 672 DNI~TAkAIA~e--CGILt~~~d~~~lEG~eF-------------------------------------------r~~s~ 706 (1034)
T KOG0204|consen 672 DNINTAKAIARE--CGILTPGGDFLALEGKEF-------------------------------------------RELSQ 706 (1034)
T ss_pred CcHHHHHHHHHH--cccccCCCccceecchhh-------------------------------------------hhcCH
Confidence 999999877765 334443332222111111 00000
Q ss_pred hhhHHHHHHHHHHHhcCCCCCCCeEEEEcCcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hh
Q 003145 728 EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LL 805 (844)
Q Consensus 728 e~~~~qa~el~~~L~~~~~~~~~~~v~~g~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf 805 (844)
.+ ..++|. .+.|.. |..-.+|=.-++.|.+ .+ +=|-+-|| +.|| .+
T Consensus 707 -------ee-~~~i~p------kl~VlA-------RSSP~DK~lLVk~L~~-~g---------~VVAVTGD-GTNDaPAL 754 (1034)
T KOG0204|consen 707 -------EE-RDKIWP------KLRVLA-------RSSPNDKHLLVKGLIK-QG---------EVVAVTGD-GTNDAPAL 754 (1034)
T ss_pred -------HH-HHhhhh------hheeee-------cCCCchHHHHHHHHHh-cC---------cEEEEecC-CCCCchhh
Confidence 11 122211 133331 1233478888877753 22 45667799 9999 66
Q ss_pred c--cCcEEEeCCCCcchhhh
Q 003145 806 T--QFLIQVGSSINSLSKEK 823 (844)
Q Consensus 806 ~--g~~Iavgna~~~~a~~~ 823 (844)
+ ..|.+||-+..++|++.
T Consensus 755 keADVGlAMGIaGTeVAKEa 774 (1034)
T KOG0204|consen 755 KEADVGLAMGIAGTEVAKEA 774 (1034)
T ss_pred hhcccchhccccchhhhhhh
Confidence 6 89999999999999884
No 371
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=26.24 E-value=76 Score=32.48 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=32.2
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.|.+.++|++|.+ .|.+++|+|+.+...+...++.+++
T Consensus 95 ~~~g~~~~L~~L~~-~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 95 VYPGVRDTLMELRE-SGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCHHHHHHHHHH-CCCEEEEEeCCchHHHHHHHHhCCh
Confidence 45679999999987 4899999999998888777777643
No 372
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=25.86 E-value=79 Score=32.46 Aligned_cols=16 Identities=13% Similarity=0.283 Sum_probs=14.4
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
+.++++||+||||++.
T Consensus 3 ~~~~viFD~DGTL~d~ 18 (221)
T PRK10563 3 QIEAVFFDCDGTLVDS 18 (221)
T ss_pred CCCEEEECCCCCCCCC
Confidence 5689999999999987
No 373
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=25.46 E-value=1.2e+03 Score=27.67 Aligned_cols=102 Identities=10% Similarity=0.053 Sum_probs=58.5
Q ss_pred eCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCC----chhhc-c-CCeEEECC--CCHH
Q 003145 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL-G-AGAILVNP--WNIT 515 (844)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G----~~~~l-g-~~g~lvnP--~d~~ 515 (844)
+.+.+++.++.+- ..+++|+- +-|+| ...||+.+| .|+|+--..+ -+..+ . ..|+.+++ .+.+
T Consensus 350 i~~w~Pq~~lL~h-p~v~~fIt---HGG~~-s~~Eal~~G----vP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~ 420 (507)
T PHA03392 350 TQKWFPQRAVLKH-KNVKAFVT---QGGVQ-STDEAIDAL----VPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAA 420 (507)
T ss_pred EecCCCHHHHhcC-CCCCEEEe---cCCcc-cHHHHHHcC----CCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHH
Confidence 4678888765432 55777773 45654 578999995 5555543322 11111 1 13666765 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHh------cCHHHHHHHHH
Q 003145 516 EVANAIARALNMSPEEREKRHWHNFTHVTT------HTAQEWAETFV 556 (844)
Q Consensus 516 ~~A~ai~~aL~m~~~er~~r~~~~~~~v~~------~~~~~W~~~fl 556 (844)
++++||.++|+.+. -+++.++..+.++. ..+-+|++..+
T Consensus 421 ~l~~ai~~vl~~~~--y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 421 QLVLAIVDVIENPK--YRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred HHHHHHHHHhCCHH--HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999998643 22333333333332 24456666543
No 374
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=25.30 E-value=1.4e+02 Score=37.26 Aligned_cols=68 Identities=10% Similarity=0.134 Sum_probs=48.8
Q ss_pred HHHHHhcCCeEEEEec---CC--ccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh
Q 003145 583 IERYLRSNNRLLILGF---NA--TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (844)
Q Consensus 583 ~~~y~~sk~rLi~lD~---DG--TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (844)
.+.+.....|.+++=+ ++ +++..-. ..-.|-+++.+++++|.+ .|++|+++||..........
T Consensus 409 ~~~~~~~G~rvl~vA~~~~e~~l~~~Gli~-----------l~Dp~R~~a~~aI~~l~~-aGI~v~miTGD~~~tA~~IA 476 (755)
T TIGR01647 409 VDELASRGYRALGVARTDEEGRWHFLGLLP-----------LFDPPRHDTKETIERARH-LGVEVKMVTGDHLAIAKETA 476 (755)
T ss_pred HHHHHhCCCEEEEEEEEcCCCCcEEEEEee-----------ccCCChhhHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 3445555667777765 23 3332211 123467899999999988 59999999999999999999
Q ss_pred cccCc
Q 003145 658 QEYNL 662 (844)
Q Consensus 658 ~~l~l 662 (844)
+++++
T Consensus 477 ~~lGI 481 (755)
T TIGR01647 477 RRLGL 481 (755)
T ss_pred HHcCC
Confidence 98765
No 375
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=25.07 E-value=48 Score=33.47 Aligned_cols=40 Identities=18% Similarity=0.362 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
.+-+++.++|+.|.+ .|..++|+||-...........+++
T Consensus 127 ~~~~~~~~~l~~L~~-~Gi~~~i~TGD~~~~a~~~~~~lgi 166 (215)
T PF00702_consen 127 PLRPGAKEALQELKE-AGIKVAILTGDNESTASAIAKQLGI 166 (215)
T ss_dssp EBHTTHHHHHHHHHH-TTEEEEEEESSEHHHHHHHHHHTTS
T ss_pred cchhhhhhhhhhhhc-cCcceeeeecccccccccccccccc
Confidence 466789999999998 5899999999999999999988776
No 376
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=24.92 E-value=5.8e+02 Score=30.98 Aligned_cols=162 Identities=16% Similarity=0.144 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHH
Q 003145 377 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 456 (844)
Q Consensus 377 Gi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~al 456 (844)
=-+..|+.+.++|++-|+-+ |++..-|.-++ +..+..+.++ |-.. ..|+| ..-...+|-..-
T Consensus 771 idP~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~~--------Gl~p-~riif-s~va~k~eHvrr 832 (966)
T KOG4626|consen 771 IDPSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQL--------GLEP-DRIIF-SPVAAKEEHVRR 832 (966)
T ss_pred CCHHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHHh--------CCCc-cceee-ccccchHHHHHh
Confidence 34678999999999999754 77777676443 2233333322 2211 12553 555566888888
Q ss_pred HHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEe--------CCCCchhhc--cCCeEEECCCCHHHHHHHHHHHhc
Q 003145 457 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS--------EFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 457 y~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlS--------e~~G~~~~l--g~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
+..|||++-|++.-|-- +-.|-+.+ |+++++ ..+ ++... |-+-+++ .+.++..+.-.++-+
T Consensus 833 ~~LaDv~LDTplcnGhT-Tg~dvLw~-----GvPmVTmpge~lAsrVa-~Sll~~~Gl~hlia--k~~eEY~~iaV~Lat 903 (966)
T KOG4626|consen 833 GQLADVCLDTPLCNGHT-TGMDVLWA-----GVPMVTMPGETLASRVA-ASLLTALGLGHLIA--KNREEYVQIAVRLAT 903 (966)
T ss_pred hhhhhhcccCcCcCCcc-cchhhhcc-----CCceeecccHHHHHHHH-HHHHHHcccHHHHh--hhHHHHHHHHHHhhc
Confidence 99999999999988864 34455555 333332 221 11111 3222333 345555554444434
Q ss_pred CCHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHhHHH
Q 003145 527 MSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDTVVE 565 (844)
Q Consensus 527 m~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~~~~ 565 (844)
+-+.-++-|++--..++ --++..+|+....+.+.+.++.
T Consensus 904 d~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 904 DKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred CHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 33333333332222222 2378889998877777766653
No 377
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=24.62 E-value=3.4e+02 Score=26.10 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEeCCCCCHHHHHHHHHhC
Q 003145 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (844)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~~~~~~v~~~el~aly~~A 460 (844)
.+..+..+.++++ +..++||.|...++.+ .+....+++.+.++..+|+ .||++.....+-.+-...|..+
T Consensus 42 ~~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~ 111 (138)
T PRK00109 42 DWDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADV 111 (138)
T ss_pred HHHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHc
Confidence 3566666666653 4578899887655443 2344566677777766663 4899988888877666666543
No 378
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=24.57 E-value=8e+02 Score=27.74 Aligned_cols=138 Identities=14% Similarity=0.176 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhCcCCCCceEEEEEEcCCC-CChHHHHHHHHHHHHHHHHhhc-ccCCCCcccEEEeCCCCCHHHHHHHHH
Q 003145 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTR-TDVPEYQRLTSQVHEIVGRING-RFGTLTAVPIHHLDRSLDFPALCALYA 458 (844)
Q Consensus 381 ~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r-~~~~~~~~l~~~l~~lv~~IN~-~~g~~~~~pv~~~~~~v~~~el~aly~ 458 (844)
=+.+.+.+-+..|+.. ..+.|+..-. .+.+++.. ++++++. +.|.. -|.|..+..+..+=|
T Consensus 208 PmLi~E~aYR~~P~~v---~~~~V~Nt~~~ke~~~F~~-------f~~~ldlvr~gka------sfegR~~~p~fla~~- 270 (364)
T PF10933_consen 208 PMLICEEAYRADPDAV---EHVYVTNTYHLKEHPTFVN-------FANSLDLVRDGKA------SFEGRFDFPDFLAQH- 270 (364)
T ss_pred cHHHHHHHHHhChhhc---ceEEEecchhhhcCHHHHH-------HHHhhHHhhcCee------EEeeecChHHHHHhC-
Confidence 3455666667788864 3455554221 12233332 3333332 23322 246666666666644
Q ss_pred hCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003145 459 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (844)
Q Consensus 459 ~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 538 (844)
+|+.|------|+|..-+|++--| =|+|- -++.|++-|+.-+-+|..+=|++|.+|+..-+.....-.++
T Consensus 271 -tD~VvSHqWeN~lNYlY~daLygg----YPLVH-----NS~~l~d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~r 340 (364)
T PF10933_consen 271 -TDAVVSHQWENPLNYLYYDALYGG----YPLVH-----NSPLLKDVGYYYPDFDAFEGARQLLRAIREHDADLDAYRAR 340 (364)
T ss_pred -CCEEEeccccchhhHHHHHHHhcC----CCccc-----CcchhcccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHH
Confidence 699887777899999999998753 46764 24556667899989999999999999998766555544455
Q ss_pred HHHHHHh
Q 003145 539 NFTHVTT 545 (844)
Q Consensus 539 ~~~~v~~ 545 (844)
+++.+.+
T Consensus 341 a~~~l~~ 347 (364)
T PF10933_consen 341 ARRLLDR 347 (364)
T ss_pred HHHHHHh
Confidence 5555544
No 379
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=24.44 E-value=1.4e+02 Score=36.76 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=53.2
Q ss_pred cHHHHHHHHHhcCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhh
Q 003145 578 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 657 (844)
Q Consensus 578 ~~~~~~~~y~~sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~ 657 (844)
+.....+.+.+...+.++.-.|++++.... ..-.+-++.++++++|.+ .|++++++||-.........
T Consensus 408 ~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~-----------l~Dp~R~~a~e~I~~Lr~-~GI~vvMiTGDn~~TA~aIA 475 (673)
T PRK14010 408 DLDALVKGVSKKGGTPLVVLEDNEILGVIY-----------LKDVIKDGLVERFRELRE-MGIETVMCTGDNELTAATIA 475 (673)
T ss_pred HHHHHHHHHHhCCCeEEEEEECCEEEEEEE-----------eecCCcHHHHHHHHHHHH-CCCeEEEECCCCHHHHHHHH
Confidence 344455566665566665545777664321 223467899999999987 59999999999999999999
Q ss_pred cccCc
Q 003145 658 QEYNL 662 (844)
Q Consensus 658 ~~l~l 662 (844)
+++++
T Consensus 476 ~elGI 480 (673)
T PRK14010 476 KEAGV 480 (673)
T ss_pred HHcCC
Confidence 98765
No 380
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=24.02 E-value=95 Score=31.23 Aligned_cols=39 Identities=26% Similarity=0.337 Sum_probs=32.0
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+.+.+.++|++|.+ .|..++|+|+-+...+...+..+++
T Consensus 93 ~~~~~~~~L~~L~~-~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 93 PHPDVPAGLRALKE-RGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 34678899999987 5899999999999888887776553
No 381
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=23.81 E-value=71 Score=32.90 Aligned_cols=17 Identities=12% Similarity=0.173 Sum_probs=14.9
Q ss_pred cCCeEEEEecCCccCCC
Q 003145 589 SNNRLLILGFNATLTEP 605 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~ 605 (844)
.+.+.|+||+||||++.
T Consensus 5 ~~~k~iiFD~DGTL~d~ 21 (222)
T PRK10826 5 RQILAAIFDMDGLLIDS 21 (222)
T ss_pred ccCcEEEEcCCCCCCcC
Confidence 45789999999999987
No 382
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=23.71 E-value=68 Score=33.44 Aligned_cols=191 Identities=13% Similarity=0.175 Sum_probs=91.6
Q ss_pred CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc---eEEe
Q 003145 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 666 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l---~lia 666 (844)
+.++++||+|.||-+.. ..+...+++.|.+.-.+ ++-+-.--.......+++..++ ||.+
T Consensus 14 ~~~~l~FDiDdtLYp~S--------------t~i~~~~~~nI~~f~~e---klgi~~e~a~~L~~~~yk~YG~t~aGL~~ 76 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLS--------------TGIQLMMRNNIQEFFVE---KLGISEEEAEELRESLYKEYGLTMAGLKA 76 (244)
T ss_pred cceEEEEecccccccCc--------------hhHHHHHHHHHHHHHHH---HhCCChhhhHHHHHHHHHHHhHHHHHHHH
Confidence 67899999999999873 44666677666655432 2333333333444555655543 3333
Q ss_pred ecceEEEecCCeeeecc----c-ccCChHHHHHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHH
Q 003145 667 ENGMFLRCTTGKWMTTM----P-EHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHL 741 (844)
Q Consensus 667 enG~~i~~~~~~w~~~~----~-~~~~~~w~~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L 741 (844)
-++- .. ..++...+ | ..+..+| .++.++-.... +. .|-|.+++...+ ..+++.|
T Consensus 77 ~~~~-~d--~deY~~~V~~~LPlq~LkPD~--~LRnlLL~l~~---------r~---k~~FTNa~k~HA----~r~Lk~L 135 (244)
T KOG3109|consen 77 VGYI-FD--ADEYHRFVHGRLPLQDLKPDP--VLRNLLLSLKK---------RR---KWIFTNAYKVHA----IRILKKL 135 (244)
T ss_pred hccc-CC--HHHHHHHhhccCcHhhcCCCH--HHHHHHHhCcc---------cc---EEEecCCcHHHH----HHHHHHh
Confidence 2221 11 00110111 0 0111122 12333222211 11 677778775543 3334433
Q ss_pred -hcCCCCCCCeEEEEc----CcEEEEEeCCCCHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCchhhc----c-CcEE
Q 003145 742 -WTGPISNASVEVVQG----SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKVLLT----Q-FLIQ 811 (844)
Q Consensus 742 -~~~~~~~~~~~v~~g----~~~vEV~p~gvnKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nDMf~----g-~~Ia 811 (844)
.++-++ ++..... +.-+=.+|. -.|.++.++..|. .+++.+++|-| +.+-... | .++.
T Consensus 136 GieDcFe--gii~~e~~np~~~~~vcKP~----~~afE~a~k~agi-----~~p~~t~FfDD-S~~NI~~ak~vGl~tvl 203 (244)
T KOG3109|consen 136 GIEDCFE--GIICFETLNPIEKTVVCKPS----EEAFEKAMKVAGI-----DSPRNTYFFDD-SERNIQTAKEVGLKTVL 203 (244)
T ss_pred ChHHhcc--ceeEeeccCCCCCceeecCC----HHHHHHHHHHhCC-----CCcCceEEEcC-chhhHHHHHhccceeEE
Confidence 011111 1111111 133334443 2466777777773 23899999999 6655433 3 3566
Q ss_pred EeCCC-CcchhhhcCCHHHH
Q 003145 812 VGSSI-NSLSKEKKRKVHQL 830 (844)
Q Consensus 812 vgna~-~~~a~~~l~~~~~v 830 (844)
+|-.. ..-+++.+.+.++.
T Consensus 204 v~~~~~~~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 204 VGREHKIKGVDYALEQIHNN 223 (244)
T ss_pred EEeeecccchHHHHHHhhch
Confidence 66653 23455665555544
No 383
>PRK09449 dUMP phosphatase; Provisional
Probab=23.40 E-value=1.6e+02 Score=30.21 Aligned_cols=16 Identities=13% Similarity=0.146 Sum_probs=13.5
Q ss_pred CCeEEEEecCCccCCC
Q 003145 590 NNRLLILGFNATLTEP 605 (844)
Q Consensus 590 k~rLi~lD~DGTL~~~ 605 (844)
+.|.|+||+||||++.
T Consensus 2 ~~k~iiFDlDGTLid~ 17 (224)
T PRK09449 2 KYDWILFDADETLFHF 17 (224)
T ss_pred CccEEEEcCCCchhcc
Confidence 3578999999999974
No 384
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=23.25 E-value=80 Score=33.32 Aligned_cols=39 Identities=18% Similarity=0.136 Sum_probs=32.3
Q ss_pred CCChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 622 ~~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+-|.+.+.|+.|.+ .|..++|+||.+...++..++.++
T Consensus 99 ~~~pg~~e~L~~L~~-~g~~l~IvT~~~~~~~~~~l~~~g 137 (253)
T TIGR01422 99 SPIPGVIEVIAYLRA-RGIKIGSTTGYTREMMDVVAPEAA 137 (253)
T ss_pred ccCCCHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHHHH
Confidence 345678999999987 599999999999999888877653
No 385
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=22.87 E-value=96 Score=32.77 Aligned_cols=39 Identities=8% Similarity=-0.053 Sum_probs=32.9
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+-|.+.++|+.|.+ .|.+++|+|+.+...++..++.+++
T Consensus 109 l~pgv~e~L~~L~~-~g~~l~I~Tn~~~~~~~~~l~~~gl 147 (248)
T PLN02770 109 PLNGLYKLKKWIED-RGLKRAAVTNAPRENAELMISLLGL 147 (248)
T ss_pred cCccHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 44668899999987 5999999999999999988887653
No 386
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=22.79 E-value=73 Score=39.33 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHhcccCcCCCCCceEEEEeeCCCch--hhc--cCcEEEeCCCC
Q 003145 768 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKV--LLT--QFLIQVGSSIN 817 (844)
Q Consensus 768 nKG~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~nD--Mf~--g~~Iavgna~~ 817 (844)
+|...+++|-++ -..|+.+|| +-|| .+. ..||+||.+.+
T Consensus 587 dK~~~V~~l~~~----------g~~VamVGD-GINDAPALA~AdVGiAmG~GtD 629 (713)
T COG2217 587 DKAEIVRELQAE----------GRKVAMVGD-GINDAPALAAADVGIAMGSGTD 629 (713)
T ss_pred HHHHHHHHHHhc----------CCEEEEEeC-CchhHHHHhhcCeeEeecCCcH
No 387
>PRK12704 phosphodiesterase; Provisional
Probab=22.37 E-value=2.7e+02 Score=33.21 Aligned_cols=56 Identities=21% Similarity=0.317 Sum_probs=45.7
Q ss_pred CcCCChhHhhhhhcc-----cCCCceEEEeCCCCchhhc-------c-CCeEEECCCCHHHHHHHHHHHhc
Q 003145 469 RDGMNLVSYEFVACQ-----DLKKGVLILSEFAGAAQSL-------G-AGAILVNPWNITEVANAIARALN 526 (844)
Q Consensus 469 ~EG~~Lv~~Eama~~-----~~~~g~lVlSe~~G~~~~l-------g-~~g~lvnP~d~~~~A~ai~~aL~ 526 (844)
+||-|+-++|. ++| .+.|.++++|.|.....++ + .+| .+.|+.++++.....+-+.
T Consensus 228 reGrnir~~e~-~tgvd~iiddtp~~v~ls~~~~~rre~a~~~l~~l~~dg-~i~P~~iee~~~~~~~~~~ 296 (520)
T PRK12704 228 REGRNIRALET-LTGVDLIIDDTPEAVILSGFDPIRREIARLALEKLVQDG-RIHPARIEEMVEKARKEVD 296 (520)
T ss_pred CCcchHHHHHH-HhCCeEEEcCCCCeEEEecCChhhHHHHHHHHHHHHhcC-CcCCCCHHHHHHHHHHHHH
Confidence 79999999997 467 5778999999999888544 2 234 5899999999999988775
No 388
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=22.04 E-value=1e+02 Score=33.32 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=33.9
Q ss_pred CChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccCc
Q 003145 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 662 (844)
Q Consensus 623 ~~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~l 662 (844)
+-|.+.+.|+.|.+ .|+.++|+|+.+...+...+..+++
T Consensus 143 l~pg~~e~L~~L~~-~gi~laIvSn~~~~~~~~~L~~~gl 181 (273)
T PRK13225 143 LFPGVADLLAQLRS-RSLCLGILSSNSRQNIEAFLQRQGL 181 (273)
T ss_pred cCCCHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 55779999999987 5999999999999999988887754
No 389
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=21.88 E-value=2.5e+02 Score=29.57 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=43.4
Q ss_pred cHHHHHHHHHh-c-CCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC-CChhhHH
Q 003145 578 READSIERYLR-S-NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG-SDRNVLD 654 (844)
Q Consensus 578 ~~~~~~~~y~~-s-k~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG-R~~~~l~ 654 (844)
+...+.+.|.. . -..|.++|+||+.... +...+.|+++++..+.+|.+-=| |+.+.++
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~~-------------------~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~ 92 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQH-------------------AREFDYIKSLRRLTTKDIEVGGGIRTKSQIM 92 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccCC-------------------cchHHHHHHHHhhcCCeEEEcCCcCCHHHHH
Confidence 45568888887 3 4889999999986433 34677777777754556665555 5677777
Q ss_pred Hhhc
Q 003145 655 KNFQ 658 (844)
Q Consensus 655 ~~~~ 658 (844)
+++.
T Consensus 93 ~~l~ 96 (234)
T PRK13587 93 DYFA 96 (234)
T ss_pred HHHH
Confidence 7775
No 390
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=21.72 E-value=4.6e+02 Score=31.13 Aligned_cols=95 Identities=22% Similarity=0.207 Sum_probs=65.2
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHHHh-CcCCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003145 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (844)
Q Consensus 364 ~vil~VdRld~~KGi~~~l~Af~~ll~~-~P~~~~~v~Lv~i~~p~r~~~~~~~~l~~~l~~lv~~IN~~~g~~~~~pv~ 442 (844)
+=+++++|----|-+..+|=|+..+... ...-+++---++|-.|+| +|..++.+.+.++....+ ....
T Consensus 129 rD~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PTR-------ELA~QV~~~~~~~~~~~~----~~~~ 197 (519)
T KOG0331|consen 129 RDLVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPTR-------ELAVQVQAEAREFGKSLR----LRST 197 (519)
T ss_pred CceEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCcH-------HHHHHHHHHHHHHcCCCC----ccEE
Confidence 4588899999999999999999998863 222233332333445774 677777777666654433 1233
Q ss_pred EeCCCCC-HHHHHHHHHhCcEEEEcCCC
Q 003145 443 HLDRSLD-FPALCALYAVTDVALVTSLR 469 (844)
Q Consensus 443 ~~~~~v~-~~el~aly~~ADv~v~~S~~ 469 (844)
.++|..+ ..++..|-+.+||++-|+-|
T Consensus 198 cvyGG~~~~~Q~~~l~~gvdiviaTPGR 225 (519)
T KOG0331|consen 198 CVYGGAPKGPQLRDLERGVDVVIATPGR 225 (519)
T ss_pred EEeCCCCccHHHHHHhcCCcEEEeCChH
Confidence 4455554 67999999999999999854
No 391
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=21.45 E-value=9.6e+02 Score=25.18 Aligned_cols=116 Identities=16% Similarity=0.257 Sum_probs=65.0
Q ss_pred CCCChhhhhcCCccHHHHHhhhcCCEEEEecHHHHHHHHHHHHHHhCcccCCCceeeCCeE-EEEEEEecccChhHHhhh
Q 003145 265 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL-TRVAAFPIGIDSERFIRA 343 (844)
Q Consensus 265 Pfp~~e~~r~lp~r~~ll~~ll~aDlIgf~t~~~~~~Fl~~~~~~l~~~~~~~~v~~~g~~-~~v~v~P~GID~~~f~~~ 343 (844)
-||.+++||... +..|++-|-.-|-|-|.|+.-+-|-+.. .| |.... ..+.++ +|+..+.+.+
T Consensus 32 efpDydvfrAfT-S~kIIkkLK~rdgi~~dTP~~aL~klk~----~g---------y~eviiQ~lhiI-pG~EyEklvr- 95 (265)
T COG4822 32 EFPDYDVFRAFT-SRKIIKKLKERDGIDFDTPIQALNKLKD----QG---------YEEVIIQPLHII-PGIEYEKLVR- 95 (265)
T ss_pred hCccHHHHHHHh-HHHHHHHHHhhcCcccCCHHHHHHHHHH----cc---------chheeeeeeeec-CchHHHHHHH-
Confidence 378888888765 4667787888888999999665554331 11 11111 133444 4677665532
Q ss_pred hcCCchHHHHHHHHHHhCCCcEEEEEecccccCCHHHHHHHHHHHHHhCcCCCCceEEEEEEcCCC
Q 003145 344 LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 409 (844)
Q Consensus 344 ~~~~~~~~~~~~lr~~~~~~~vil~VdRld~~KGi~~~l~Af~~ll~~~P~~~~~v~Lv~i~~p~r 409 (844)
.++.++..|. .+.++.==|.+.-.....++| +....|.++.+=.+|+.|-++.
T Consensus 96 --------~V~~~~~dF~--~lkig~PlLy~k~DYe~~v~a---ik~~~ppl~k~e~~vlmgHGt~ 148 (265)
T COG4822 96 --------EVNKYSNDFK--RLKIGRPLLYYKNDYEICVEA---IKDQIPPLNKDEILVLMGHGTD 148 (265)
T ss_pred --------HHHHHhhhhh--eeecCCceeechhhHHHHHHH---HHHhcCCcCcCeEEEEEecCCC
Confidence 3444554442 233333223333334444444 4567898877766777776553
No 392
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=21.17 E-value=1.5e+02 Score=31.58 Aligned_cols=58 Identities=10% Similarity=-0.067 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhcccCcCCCCCceEEEEeeCCC-chhhc----c-CcEEEeCCC---C------cchhhhcCCHHHHHHHH
Q 003145 770 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KVLLT----Q-FLIQVGSSI---N------SLSKEKKRKVHQLFGIF 834 (844)
Q Consensus 770 G~al~~Ll~~l~~~~~~~~~~d~vlaiGD~~~-nDMf~----g-~~Iavgna~---~------~~a~~~l~~~~~v~~~l 834 (844)
-...+.++++++ .+++.+++||| +. +||.. | .+|.|..+. . ..+.+.++++.++..+|
T Consensus 182 p~~~~~~~~~~~------~~~~~~~~vGD-~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATG------CEPEEAVMIGD-DCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhC------CChhhEEEECC-CcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 446667778877 67899999999 74 89543 3 344553321 1 12445788898888765
No 393
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=20.78 E-value=1e+02 Score=30.42 Aligned_cols=37 Identities=14% Similarity=0.256 Sum_probs=26.9
Q ss_pred ChhHHHHHHHhhcCCCCcEEEEcCCChhhHHHhhcccC
Q 003145 624 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 661 (844)
Q Consensus 624 ~~~~~~~L~~L~~d~g~~V~I~SGR~~~~l~~~~~~l~ 661 (844)
.+.+.+.|+.|.+ .|..++|+|+.....++..+..++
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~~ 110 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGIG 110 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHcC
Confidence 3457777777766 478888888888777777776654
No 394
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=20.72 E-value=2.2e+02 Score=30.05 Aligned_cols=59 Identities=8% Similarity=0.109 Sum_probs=35.7
Q ss_pred cHHHHHHHHHhcC-CeEEEEec--CCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEcC--CChhh
Q 003145 578 READSIERYLRSN-NRLLILGF--NATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG--SDRNV 652 (844)
Q Consensus 578 ~~~~~~~~y~~sk-~rLi~lD~--DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~SG--R~~~~ 652 (844)
+..++++.+.... ..+|++|+ |||+... ..+.++++++..+ .-++++| |+.++
T Consensus 149 ~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G~---------------------~~~li~~l~~~~~-ipvi~~GGi~s~ed 206 (234)
T PRK13587 149 NLFSFVRQLSDIPLGGIIYTDIAKDGKMSGP---------------------NFELTGQLVKATT-IPVIASGGIRHQQD 206 (234)
T ss_pred CHHHHHHHHHHcCCCEEEEecccCcCCCCcc---------------------CHHHHHHHHHhCC-CCEEEeCCCCCHHH
Confidence 3344444444443 67888887 7887543 2344455544333 3467777 78889
Q ss_pred HHHhhc
Q 003145 653 LDKNFQ 658 (844)
Q Consensus 653 l~~~~~ 658 (844)
+.++++
T Consensus 207 i~~l~~ 212 (234)
T PRK13587 207 IQRLAS 212 (234)
T ss_pred HHHHHH
Confidence 988875
No 395
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=20.71 E-value=3.5e+02 Score=27.11 Aligned_cols=84 Identities=15% Similarity=0.221 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhcCCCceEeeccceEEEEeecCChhhhHHHHHHHHHHHhcCC-CCCCCeEEEEcCcEEEEEeCCCCHHH
Q 003145 693 DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGA 771 (844)
Q Consensus 693 ~~v~~i~~~~~~rt~gs~iE~k~~sl~~hy~~~d~e~~~~qa~el~~~L~~~~-~~~~~~~v~~g~~~vEV~p~gvnKG~ 771 (844)
..+..+++...+ +++.+..--|...|+. |+++++.| .-. ...........-.++||.|. +|-.
T Consensus 48 pdv~~iL~~L~~---------~gv~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~ 111 (169)
T PF12689_consen 48 PDVPEILQELKE---------RGVKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTT 111 (169)
T ss_dssp TTHHHHHHHHHH---------CT--EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHH
T ss_pred cCHHHHHHHHHH---------CCCEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHH
Confidence 446667766654 3344454445555654 56777776 321 11112222333356999986 9999
Q ss_pred HHHHHHHHhcccCcCCCCCceEEEEee
Q 003145 772 AIDRILAEIVHSKKMKTAIDYVLCIGH 798 (844)
Q Consensus 772 al~~Ll~~l~~~~~~~~~~d~vlaiGD 798 (844)
=.++|.+..| ++++.+++|=|
T Consensus 112 Hf~~i~~~tg------I~y~eMlFFDD 132 (169)
T PF12689_consen 112 HFRRIHRKTG------IPYEEMLFFDD 132 (169)
T ss_dssp HHHHHHHHH---------GGGEEEEES
T ss_pred HHHHHHHhcC------CChhHEEEecC
Confidence 9999999998 89999888877
No 396
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=20.63 E-value=1e+03 Score=26.89 Aligned_cols=65 Identities=22% Similarity=0.133 Sum_probs=46.1
Q ss_pred EeCCCCCHHHHHHHHHhCcEEEEcCCCcCCChhHhhhhhcccCCCceEEEeCCCCchhhccCCeEEECCCCHHHHHHHHH
Q 003145 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 522 (844)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~v~~S~~EG~~Lv~~Eama~~~~~~g~lVlSe~~G~~~~lg~~g~lvnP~d~~~~A~ai~ 522 (844)
+++...+.+++..+-..+|++-++|. +-.|...+++++.- +.|++++.... .+++++-.|+.
T Consensus 168 ~~tev~d~~~v~~~~~~~d~lqIga~-~~~n~~LL~~va~t---~kPVllk~G~~--------------~t~ee~~~A~e 229 (352)
T PRK13396 168 IITEVMDAADLEKIAEVADVIQVGAR-NMQNFSLLKKVGAQ---DKPVLLKRGMA--------------ATIDEWLMAAE 229 (352)
T ss_pred EEEeeCCHHHHHHHHhhCCeEEECcc-cccCHHHHHHHHcc---CCeEEEeCCCC--------------CCHHHHHHHHH
Confidence 34666777777777777999999986 77789999999863 46888875332 14566666665
Q ss_pred HHh
Q 003145 523 RAL 525 (844)
Q Consensus 523 ~aL 525 (844)
.++
T Consensus 230 ~i~ 232 (352)
T PRK13396 230 YIL 232 (352)
T ss_pred HHH
Confidence 554
No 397
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=20.45 E-value=1.4e+02 Score=32.78 Aligned_cols=129 Identities=18% Similarity=0.239 Sum_probs=78.0
Q ss_pred ccCCcEEEEeCCCCCCCch-hhhHHHHhccCceEEEEecChHhhhhhhhhhhhhccccccCCC---CCCcccccccchhh
Q 003145 132 KEFEARWIGWAGVNVPDEI-GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL---GLPQEDRLATTRSF 207 (844)
Q Consensus 132 ~~~~~~Wvg~~g~~~~~~~-~~~~~~~~~~~~~~~pV~l~~~~~~~~Y~~f~n~~LWp~fH~~---~~~~~~~~~~~~~~ 207 (844)
++....++|+......+.+ ..+.++....++.++.|-+.+.....+.+ ..-|||++... ..+..-. .....
T Consensus 94 ~~~pdrf~~~~~v~p~~~~~a~~E~er~v~~~gf~g~~l~p~~~~~~~~---~~~~~pi~~~a~~~gvpv~ih--tG~~~ 168 (293)
T COG2159 94 AEYPDRFVGFARVDPRDPEAAAEELERRVRELGFVGVKLHPVAQGFYPD---DPRLYPIYEAAEELGVPVVIH--TGAGP 168 (293)
T ss_pred hhCCcceeeeeeeCCCchHHHHHHHHHHHHhcCceEEEecccccCCCCC---ChHHHHHHHHHHHcCCCEEEE--eCCCC
Confidence 5678888888776554422 23345566667778888776655443332 33377777654 1111000 00000
Q ss_pred H-HHHHHHHHHHHHHHHHHHhhCCCCCEEEEeC---ccchhHHHHHHhcCCCCeEEEEEecCC
Q 003145 208 Q-SQFAAYIKANQMFADVVNKHYKDGDVVWCHD---YHLMFLPKCLKEYNSDMKVGWFLHTPF 266 (844)
Q Consensus 208 ~-~~~~~Y~~vN~~fa~~i~~~~~~~DiVwvHD---yhl~llp~~lr~~~~~~~i~~flH~Pf 266 (844)
. ..+..+ ..|....+.|+..+-.-.||..|- |-.++-...+....+++.+-++...|+
T Consensus 169 ~~~~~~~~-~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~~~nvy~d~s~~~~~ 230 (293)
T COG2159 169 GGAGLEKG-HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYAHPNVYLDTSGVRPK 230 (293)
T ss_pred CCcccccC-CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHhCCCceeeeeccccc
Confidence 0 001222 467888888888887788999987 666666667777888888888887774
No 398
>PRK10949 protease 4; Provisional
Probab=20.02 E-value=1.6e+03 Score=27.33 Aligned_cols=48 Identities=19% Similarity=0.259 Sum_probs=33.3
Q ss_pred cCCeEEEEecCCccCCCCCCCCCCCccccccccCCChhHHHHHHHhhcCCCCcEEEEc
Q 003145 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS 646 (844)
Q Consensus 589 sk~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~I~S 646 (844)
.+.++-++..+||+++....++ ..-.+.+.+.|+++.+|++++-+|+-
T Consensus 324 ~~~~Iavi~~~G~I~~g~~~~g----------~~~~~~~~~~l~~a~~D~~vkaVvLr 371 (618)
T PRK10949 324 TGGSIAVIFANGAIMDGEETPG----------NVGGDTTAAQIRDARLDPKVKAIVLR 371 (618)
T ss_pred CCCeEEEEEEEEEEcCCCCcCC----------CcCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3567888999999997643221 11235678888998888888755553
Done!